LOCUS       DAWKOX010000001        38712 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.001, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000001 DAWKOX010000000
VERSION     DAWKOX010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38712
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.001"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            294..938
                     /gene="rplC"
                     /locus_tag="WJK78_000001"
     CDS             294..938
                     /gene="rplC"
                     /locus_tag="WJK78_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ7596990.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            938..1558
                     /gene="rplD"
                     /locus_tag="WJK78_000002"
     CDS             938..1558
                     /gene="rplD"
                     /locus_tag="WJK78_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ7596991.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1555..1869
                     /gene="rplW"
                     /locus_tag="WJK78_000003"
     CDS             1555..1869
                     /gene="rplW"
                     /locus_tag="WJK78_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ7596992.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1875..2708
                     /gene="rplB"
                     /locus_tag="WJK78_000004"
     CDS             1875..2708
                     /gene="rplB"
                     /locus_tag="WJK78_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ7596993.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     SNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2715..2993
                     /gene="rpsS"
                     /locus_tag="WJK78_000005"
     CDS             2715..2993
                     /gene="rpsS"
                     /locus_tag="WJK78_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ7596994.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3002..3331
                     /gene="rplV"
                     /locus_tag="WJK78_000006"
     CDS             3002..3331
                     /gene="rplV"
                     /locus_tag="WJK78_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ7596995.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3341..4033
                     /gene="rpsC"
                     /locus_tag="WJK78_000007"
     CDS             3341..4033
                     /gene="rpsC"
                     /locus_tag="WJK78_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ7596996.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4017..4433
                     /gene="rplP"
                     /locus_tag="WJK78_000008"
     CDS             4017..4433
                     /gene="rplP"
                     /locus_tag="WJK78_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ7596997.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4433..4624
                     /gene="rpmC"
                     /locus_tag="WJK78_000009"
     CDS             4433..4624
                     /gene="rpmC"
                     /locus_tag="WJK78_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ7596998.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4624..4887
                     /gene="rpsQ"
                     /locus_tag="WJK78_000010"
     CDS             4624..4887
                     /gene="rpsQ"
                     /locus_tag="WJK78_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ7596999.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5109..5477
                     /gene="rplN"
                     /locus_tag="WJK78_000011"
     CDS             5109..5477
                     /gene="rplN"
                     /locus_tag="WJK78_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ7597000.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5489..5812
                     /gene="rplX"
                     /locus_tag="WJK78_000012"
     CDS             5489..5812
                     /gene="rplX"
                     /locus_tag="WJK78_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ7597001.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5822..6361
                     /gene="rplE"
                     /locus_tag="WJK78_000013"
     CDS             5822..6361
                     /gene="rplE"
                     /locus_tag="WJK78_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ7597002.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6364..6669
                     /gene="rpsN"
                     /locus_tag="WJK78_000014"
     CDS             6364..6669
                     /gene="rpsN"
                     /locus_tag="WJK78_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ7597003.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6685..7077
                     /gene="rpsH"
                     /locus_tag="WJK78_000015"
     CDS             6685..7077
                     /gene="rpsH"
                     /locus_tag="WJK78_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ7597004.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYADRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7091..7624
                     /gene="rplF"
                     /locus_tag="WJK78_000016"
     CDS             7091..7624
                     /gene="rplF"
                     /locus_tag="WJK78_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ7597005.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7638..7991
                     /gene="rplR"
                     /locus_tag="WJK78_000017"
     CDS             7638..7991
                     /gene="rplR"
                     /locus_tag="WJK78_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ7597006.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8010..8528
                     /gene="rpsE"
                     /locus_tag="WJK78_000018"
     CDS             8010..8528
                     /gene="rpsE"
                     /locus_tag="WJK78_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ7597007.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8521..8706
                     /gene="rpmD"
                     /locus_tag="WJK78_000019"
     CDS             8521..8706
                     /gene="rpmD"
                     /locus_tag="WJK78_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ7597008.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8708..9142
                     /gene="rplO"
                     /locus_tag="WJK78_000020"
     CDS             8708..9142
                     /gene="rplO"
                     /locus_tag="WJK78_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ7597009.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9154..10464
                     /gene="secY"
                     /locus_tag="WJK78_000021"
     CDS             9154..10464
                     /gene="secY"
                     /locus_tag="WJK78_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ7597010.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10469..10687
                     /gene="infA"
                     /locus_tag="WJK78_000022"
     CDS             10469..10687
                     /gene="infA"
                     /locus_tag="WJK78_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ7597011.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10708..10821
                     /gene="rpmJ"
                     /locus_tag="WJK78_000023"
     CDS             10708..10821
                     /gene="rpmJ"
                     /locus_tag="WJK78_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ7597012.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10887..11249
                     /gene="rpsM"
                     /locus_tag="WJK78_000024"
     CDS             10887..11249
                     /gene="rpsM"
                     /locus_tag="WJK78_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ7597013.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11269..11664
                     /gene="rpsK"
                     /locus_tag="WJK78_000025"
     CDS             11269..11664
                     /gene="rpsK"
                     /locus_tag="WJK78_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ7597014.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11684..12304
                     /gene="rpsD"
                     /locus_tag="WJK78_000026"
     CDS             11684..12304
                     /gene="rpsD"
                     /locus_tag="WJK78_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ7597015.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12330..13316
                     /gene="rpoA"
                     /locus_tag="WJK78_000027"
     CDS             12330..13316
                     /gene="rpoA"
                     /locus_tag="WJK78_000027"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ7597016.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13340..13708
                     /gene="rplQ"
                     /locus_tag="WJK78_000028"
     CDS             13340..13708
                     /gene="rplQ"
                     /locus_tag="WJK78_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ7597017.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13855..14568
                     /gene="minC"
                     /locus_tag="WJK78_000029"
     CDS             13855..14568
                     /gene="minC"
                     /locus_tag="WJK78_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ7597018.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSDERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQKTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14597..15412
                     /gene="minD"
                     /locus_tag="WJK78_000030"
     CDS             14597..15412
                     /gene="minD"
                     /locus_tag="WJK78_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ7597019.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15416..15679
                     /gene="minE"
                     /locus_tag="WJK78_000031"
     CDS             15416..15679
                     /gene="minE"
                     /locus_tag="WJK78_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ7597020.1"
                     /translation="MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVDVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15683..16603
                     /gene="oxyR"
                     /locus_tag="WJK78_000032"
     CDS             15683..16603
                     /gene="oxyR"
                     /locus_tag="WJK78_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ7597021.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16600..16791)
                     /locus_tag="WJK78_000033"
     CDS             complement(16600..16791)
                     /locus_tag="WJK78_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597022.1"
                     /translation="MLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKIDDDGNI
                     LAYRVVGSGKWRFENNACA"
     gene            complement(16933..19770)
                     /locus_tag="WJK78_000034"
     CDS             complement(16933..19770)
                     /locus_tag="WJK78_000034"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ7597023.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHTFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFALPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATATEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGEIVQTAFGQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEAQQVAAL
                     PESEDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQTQLSKLKD"
     gene            complement(19867..20676)
                     /gene="zupT"
                     /locus_tag="WJK78_000035"
     CDS             complement(19867..20676)
                     /gene="zupT"
                     /locus_tag="WJK78_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ7597024.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTTGMAVIAVSLVLFHF"
     gene            complement(20857..22113)
                     /locus_tag="WJK78_000036"
     CDS             complement(20857..22113)
                     /locus_tag="WJK78_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ7597025.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWQMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEERKKGTLQIFRQAKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCHLFTENLYKLCQEKGVQF
                     HFNQTISRIDHNGLRIKAVETKTGRFEADAVVCALGCFSRTVLAQLDLDLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTHFDNLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            complement(22192..23583)
                     /locus_tag="WJK78_000037"
     CDS             complement(22192..23583)
                     /locus_tag="WJK78_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ7597026.1"
                     /translation="MQLFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVLLKGLQF
                     TMLGYALKQAFVPSKKYEGGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWITAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            complement(23940..24716)
                     /gene="lpxA"
                     /locus_tag="WJK78_000038"
     CDS             complement(23940..24716)
                     /gene="lpxA"
                     /locus_tag="WJK78_000038"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ7597027.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTVGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKNVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFAQSTRGIIR"
     gene            complement(24759..25439)
                     /locus_tag="WJK78_000039"
     CDS             complement(24759..25439)
                     /locus_tag="WJK78_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HEZ7597028.1"
                     /translation="MERYKNAVGEDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CLQQAFKDRNWLYNSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDVTGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINKFRNRLAHHEPICFKGAIKDTNYARNIHQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            complement(25646..26095)
                     /gene="fabZ"
                     /locus_tag="WJK78_000040"
     CDS             complement(25646..26095)
                     /gene="fabZ"
                     /locus_tag="WJK78_000040"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ7597029.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(26129..27175)
                     /gene="lpxD"
                     /locus_tag="WJK78_000041"
     CDS             complement(26129..27175)
                     /gene="lpxD"
                     /locus_tag="WJK78_000041"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ7597030.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCRLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            complement(27208..27708)
                     /locus_tag="WJK78_000042"
     CDS             complement(27208..27708)
                     /locus_tag="WJK78_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ7597031.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKVQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(27774..30167)
                     /gene="bamA"
                     /locus_tag="WJK78_000043"
     CDS             complement(27774..30167)
                     /gene="bamA"
                     /locus_tag="WJK78_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ7597032.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKQYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEIGYANGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(30224..31564)
                     /gene="rseP"
                     /locus_tag="WJK78_000044"
     CDS             complement(30224..31564)
                     /gene="rseP"
                     /locus_tag="WJK78_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ7597033.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(31599..32834)
                     /locus_tag="WJK78_000045"
     CDS             complement(31599..32834)
                     /locus_tag="WJK78_000045"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ7597034.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(32839..33636)
                     /locus_tag="WJK78_000046"
     CDS             complement(32839..33636)
                     /locus_tag="WJK78_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ7597035.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLSGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(33639..34385)
                     /locus_tag="WJK78_000047"
     CDS             complement(33639..34385)
                     /locus_tag="WJK78_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ7597036.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(34441..34998)
                     /gene="frr"
                     /locus_tag="WJK78_000048"
     CDS             complement(34441..34998)
                     /gene="frr"
                     /locus_tag="WJK78_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ7597037.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(35178..36305)
                     /locus_tag="WJK78_000049"
     CDS             complement(35178..36305)
                     /locus_tag="WJK78_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ7597038.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(36379..36454)
                     /locus_tag="WJK78_000050"
     tRNA            complement(36379..36454)
                     /locus_tag="WJK78_000050"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(36419..36421),aa:Thr,seq:cgt)
     gene            36561..36755
                     /locus_tag="WJK78_000051"
     CDS             36561..36755
                     /locus_tag="WJK78_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate translocator"
                     /protein_id="HEZ7597039.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDAFALAFGRAGLLVSV
                     SAGVAVGTVLFGLCSVCLRF"
     gene            36752..37033
                     /locus_tag="WJK78_000052"
     CDS             36752..37033
                     /locus_tag="WJK78_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597040.1"
                     /translation="MNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAACAAAAVAWIFE
                     LLLGSGALGGLRGEAVLEYAFAVWLVAMLTLPKRLTRAPVQPVVFHRKK"
     gene            37129..37752
                     /gene="rsmG"
                     /locus_tag="WJK78_000053"
     CDS             37129..37752
                     /gene="rsmG"
                     /locus_tag="WJK78_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ7597041.1"
                     /translation="MERKERLQSGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQGEIDHLPQDVCVEKVQRLDVPGLDAERHIVILRKR"
     gene            37851..38624
                     /locus_tag="WJK78_000054"
     CDS             37851..38624
                     /locus_tag="WJK78_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ7597042.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKASLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELAARVSGK"
BASE COUNT         9087 a         8746 c        10655 g        10224 t
ORIGIN      
        1 tttgacgaac tgagcatccc cgattacagt catcaaccat attccggttt gtcggagaaa
       61 gatgcatacg ctgtgatgac cggataccga ccctttaaaa gagtctgacc ctatgccgtc
      121 tgaaaattca aaacgcttca gacggcatat tgaagatatt tctgatattt ctgttgatat
      181 ttctttaact tgtcagatat aatgccgagc ttggtacatt tgtgccaagt ttaactttgt
      241 ctgaaagaca ggccaatcgt agcctgtccc tttactttaa aaggaaaata atcatgactt
      301 taggtctggt tggacgcaaa gttggtatga cccgcgtgtt cgacgaacag ggtgtttctg
      361 ttccggtaac cgttttggat atgtctgcca accgcgttac acaagtaaaa tccaaagata
      421 ctgacggcta tactgccgtt caagttacct ttggtcagaa aaaagccaat cgtgtcaaca
      481 aagccgaagc cgggcacttt gcaaaagcag gtgttgaagc cggtcgcggt ttgattgagt
      541 ttgctttgac tgaagaaaaa ctggctgaat tgaaagctgg tgacgaaatc accgtttcta
      601 tgtttgaagt cggtcaactg gtcgatgtaa ccggtacctc taaaggtaaa ggtttctccg
      661 gcacgattaa acgtcataac ttcggcgccc aacgtacttc ccacggtaac tcccgctctc
      721 accgcgttcc aggttctatc ggtatggcac aagacccggg tcgcgtgttc cccggtaagc
      781 gcatggccgg ccaatacggc aacaccaagg caactgttca aaaattggaa gttgtccgtg
      841 ttgatgcaga acgccaactg ctgttggtta agggtgctgt tccgggtgcg gtcaacagcg
      901 atgttgtagt tcgtcccagc gtgaaagtag gtgcgtaatg gaattgaaag taattgacgc
      961 taaaggacaa gtttcaggca gcctgtctgt ttctgatgct ttgttcgccc gcgaatacaa
     1021 tgaagcgttg gttcatcagc tggtaaatgc ctacttggca aacgcccgct ccggtaaccg
     1081 cgctcaaaaa acccgtgccg aagtaaaaca ctcaaccaaa aaaccatggc gtcaaaaagg
     1141 taccggccgt gcccgttccg gtatgacttc ttctccgctg tggcgtaaag gtggtcgcgc
     1201 gttcccgaac aaacccgacg aaaacttcac tcaaaaagta aaccgcaaaa tgtaccgtgc
     1261 cggtatggcg actattctgt cccaattgac tcgtgacgag cgtttgtttg cgattgaggc
     1321 gttgactgcc gaaactccta aaaccaaagt ttttgctgaa caagtgaaaa atctgggtct
     1381 agagcaagtg ttgtttgtaa ccaaacagct cgacgagaat gtttacttgg cttcacgcaa
     1441 cttgccaaac gtgttggttt tggaagctca acaagttgat ccttacagct tgctgcgtta
     1501 caaaaaagta atcatcacta aagatgcagt tgcacaatta gaggagcaat gggtatgaat
     1561 caacaacgtt tgactcaagt gattttggca cctatcgttt ctgaaaaaag caacgtattg
     1621 gctgaaaaac gcaaccaaat gacgtttaaa gttttggcaa atgcaaccaa acctgaaatc
     1681 aaagcggctg ttgagctgct gtttggtgtt caagttgctt ctgtaactac cgttacaact
     1741 aaaggcaaaa ctaagcgttt tggtcgtact ttgggccgcc gcagcgatgt taaaaaagct
     1801 tatgtaagct tggctgccgg tcaagagttg gatttggaag ccgctgctgc agctgcagat
     1861 aaggaataaa caaaatggca atcgttaaaa tgaagccgac ctctgcaggc cgtcgcggca
     1921 tggttcgcgt ggtaacagaa ggtttgcaca aaggtgcgcc ttatgcacct ttgctcgaaa
     1981 agaaaaattc tactgccggt cgtaacagta atggtcatat caccacccgt cacaaaggcg
     2041 gcggtcataa acaccattac cgtgttgtag actttaaacg taacaaagac ggcattcctg
     2101 ctaaggtaga gcgtatcgaa tacgatccta accgtactgc cttcatcgca ctgttgtgct
     2161 atgcagacgg cgagcgtcgt tacatcatcg ctcctcgcgg tattcaagtc ggtgccgtat
     2221 tggtttccgg tgctgaagct gccatcaaag taggcaacac cctgccgatc cgcaacattc
     2281 ccgttggtac gactatccac tgtatcgaaa tgaaacccgg taaaggtgct caaatcgcac
     2341 gttctgccgg tgcttctgcg gtattgctgg ctaaagaagg cgcgtacgct caagtccgtc
     2401 tgcgctctgg cgaagttcgt aaaatcaacg taaattgccg tgcgaccatc ggtgaagttg
     2461 gtaacgaaga gcaaagcctg aaaaaaatcg gtaaagccgg tgccaaccgt tggcgcggta
     2521 ttcgtccgac cgtacgcggt gttgtcatga atcctgtcga tcacccgcat ggtggtggtg
     2581 aaggccgtac gggcgaggcc cgcgaaccgg tcagcccatg gggtactcct gctaaaggct
     2641 accgcactcg taataacaaa cgcacggata acatgattgt tcgtcgccgt tactcaaata
     2701 aaggttaatt tagtatggct cgttcattga aaaaaggccc atatgtagac ctgcatttgc
     2761 tgaaaaaagt agatgctgct cgcgcaagca acgacaaacg cccgattaaa acctggtctc
     2821 gtcgttctac cattctgcct gattttatcg gtctgaccat tgctgtgcac aacggccgca
     2881 cccatgtgcc tgtgtttatc agcgacaata tggttggtca taaattaggc gaattctcat
     2941 tgacccgtac ctttaaaggc cacttggccg ataaaaaggc taaaaagaaa taaggtgaat
     3001 catgagagta aatgcacaac ataaaaatgc ccgtatctct gctcaaaagg ctcgtttggt
     3061 agctgatttg attcgtggta aagacgttgc ccaagctttg aatattttgg ctttcagtcc
     3121 taaaaaaggt gccgagctga ttaaaaaagt attggagtca gctattgcta atgccgagca
     3181 caataacggt gcggacattg atgaactgaa agtggtaact atctttgttg acaaaggccc
     3241 aagcttgaaa cgttttcaag ctcgcgccaa aggtcgcggt aaccgcatcg aaaaacaaac
     3301 ttgtcatatc aatgtgacag tgggtaacta aggaaaagct atgggacaaa agattaaccc
     3361 tacaggcttt cgcctggcgg taactaaaga ctgggcttca aaatggtttg ctaaaagcac
     3421 cgacttttct actgttttga agcaggatat cgatgttcgc aattatttgc gtcaaaaatt
     3481 ggccaatgct tcggttggtc gagtggttat tgaacgccct gcaaaatctg cacgcattac
     3541 cattcactcc gctcgtccgg gtgtggttat cggtaaaaaa ggtgaggata tcgaggtttt
     3601 gaaacgtgac ttgcaagtct tgatgggtgt acctgttcat gtaaatattg aagagattcg
     3661 ccgtcctgag ttggatgctc aaattattgc tgacggtatt gcccagcagt tggaaaagcg
     3721 cgttcaattc cgtcgtgcta tgaaacgagc aatgcaaaat gcaatgcgtt ctggtgctaa
     3781 aggcattaag attatgactt caggccgtct gaatggtgcg gatattgccc gtagcgaatg
     3841 gtatcgtgaa ggtcgtgtgc cactgcatac tttacgtgca aatgtagatt atgcaaccag
     3901 cgaagcgcac accacatatg gtgtattggg tctgaaagtt tgggtttata cggaaggcaa
     3961 tattaaatct tccaaacctg aacatgagag taaacaaaga aaggcaggta gacgtaatgc
     4021 tgcagccaac tagactgaaa taccgtaagc aacaaaaggg tcgcaatact ggcatcgcta
     4081 ctcgcggtaa taaggtaagt ttcggtgagt tcggcttgaa agccgtaggt cgtggtcgtt
     4141 tgactgcccg tcaaatcgaa gctgctcgtc gtgcaatgac ccgtcatatc aaacgtggtg
     4201 gtcgtatttg gattcgtgta ttccctgata aaccgattac tgaaaagcct attcaagttc
     4261 gtatgggtgg cggtaaaggt aacgtggaat attacattgc cgaaattaaa ccaggtaaag
     4321 tgttgtatga aatggatggc gttccagagg aactggctcg tgaagcattc gagttggctg
     4381 ctgccaaatt gcctattcct acaacctttg tagtaagaca ggtgggtcaa taatgaaagc
     4441 aaatgaattg aaagacaaat ccgttgagca gttgaatgca gatttgttgg acttgttgaa
     4501 agctcagttt ggcttacgta tgcaaaacgc taccggtcaa ttaggcaaac caagtgaatt
     4561 gaaacgtgta cgtcgcgata ttgctcgtat taaaaccgtt ttaactgaaa aaggtgctaa
     4621 gtaatgagcg aaactaaaaa tgttcgtact ttgcaaggca aagtagtaag cgacaaaatg
     4681 gataaaaccg taacagtatt ggttgagcgt aaagtaaaac atccgctgta tggtaagatt
     4741 attcggttat ctactaaaat ccatgcccat gatgaaaata atcaatatgg aattggtgat
     4801 gtggttgtta tatcggaatc ccgtccattg tcaaaaacta aatcttgggt tgtcagtgag
     4861 ctggttgaga aagcacgttc tatttaagaa ttaaagcaac gtgcttggaa tgggaaacga
     4921 agtattgcag caaatttaat ttgcgtgtaa acttcgtttc ctgtctttca gtttcttctg
     4981 gaagtttctt ccctttcggg gtccaagact ggtttacttg aaccgcaagg tttcatttaa
     5041 taagcagcgg ctttgctgta agttatctga aagtggtaaa ttaagttggt taatttaaag
     5101 gtaataacat gattcaaatg cagaccatct tagatgtggc tgataactct ggtgcgcgtc
     5161 gcgtaatgtg tatcaaggta ttgggcggat ctaagcgtcg ctacgcttct gttggcgata
     5221 ttattaaagt ggcagttaaa gatgcggctc cgcgtggccg tgtcaaaaaa ggcgatgtat
     5281 ataatgcggt agttgttcgt actgctaagg gtgtacgtcg tcctgatggt gcgttaatta
     5341 aattcgataa caatgccgcc gtgttactga ataataaact tgaacctttg ggtactcgta
     5401 tctttggtcc ggtaacccgt gaattgcgta ctgagcgatt tatgaaaatc gtttcattgg
     5461 cacctgaagt attataagga atggcacgat gaataaaatc attaaaggcg atagggttgt
     5521 agtaattgct ggtaaggata aaggtaagca gggtcaagta gttcgagtgt tgggtgataa
     5581 agttgttgtt gagggcgtta atgttgtaaa acgccatcaa aaacctaatc caatgcgtgg
     5641 cattgagggc ggtattatta ctaaagaaat gcctttggat atttctaata tcgcaatcct
     5701 gaatccggaa actaataaag cggaccgtgt tggtattaag ctgattgaaa atgaaggcaa
     5761 agttaaacgc gttcgtttct tcaaatcaaa tggctctatc attggggcat aaggagataa
     5821 catggctcgg ttgagagagt tttataaaga gacagttgtt cctgaattgg ttaaacaatt
     5881 tggttacaaa tcagtaatgg aagtcccgcg tattgaaaaa atcaccttga atatgggtgt
     5941 gggtgaggct gttgctgaca aaaaagttat ggaacatgct gtttccgatt tagagaaaat
     6001 tgccggtcaa aaaccggttg ttactgttgc ccgtaaatct atcgcaggtt ttaaaatccg
     6061 tgataactat ccggttggtt gcaaagtaac attgcgtcgt gatcaaatgt ttgaattctt
     6121 ggatcgtttg attactattg cattacctcg cgtacgtgac ttccgtggtg tgagcggtaa
     6181 atcatttgat ggccgtggca attacaatat gggtgttcgt gagcaaatta tttttccgga
     6241 aattgaatac gataaaattg atgctttgcg tggtttgaat attactatta ctactacagc
     6301 aaaaaccgat gaggaagcga aagctttatt gtcattgttt aaatttccgt tcaaaggata
     6361 atcatggcta agaaagcact tattaatcgt aatctgaaac gtcaagcttt ggctaaaaaa
     6421 tatgcggcta aacgcgcggc aattaaagcg gtaatcaatg attcgaatgc aactgaggaa
     6481 gagcgttttg aggctcgttt gaggtttcaa tccattcctc gtaatgcggc acctgtgcgt
     6541 caacgtcgtc gttgtgcttt gacaggtcgc cctcgtggta ctttccgtaa atttggtttg
     6601 ggtcgtatta aaatccgtga aatcgccatg cgtggcgaaa ttccgggtgt tgttaaagcc
     6661 agctggtaat aggagtaatt aagaatgagt atgcatgatc ctatttccga tatgttgact
     6721 cgtatccgca atgcgcaacg tgctaataaa gcagcggttg caatgccttc ttcaaaatta
     6781 aagtgtgcta ttgcaaaggt attgaaagaa gaaggatata ttgaggactt cgcagtttca
     6841 tctgacgtaa agtctatatt ggaaattcaa ttaaaatact atgcagatcg tcctgtaatt
     6901 gaacaaatca agcgtgtatc tcgccccggt ttgcgtattt ataaagcgtc tagtgagatt
     6961 ccaagtgtta tgaatggctt gggtattgct attgttagta cttctaaagg tgtaatgact
     7021 gatcgtaaag cacgttctca aggtgttggt ggtgagttgt tatgcattgt agcctagtgg
     7081 aggaaaagaa atgtcacgtg tcgcaaaaaa cccagtgact gttcccgctg gtgtagaagt
     7141 aaaatttgga acagaggcat tagttattaa gggtaagaac ggtgaattgt cttttccttt
     7201 gcattctgat gtagccattg aatttaatga tggcaaattg gcttttgttg cgaataacag
     7261 cagtaaacaa gcaaatgcaa tgtctggtac tgctcgcgca ttagtcagca atatggttaa
     7321 aggtgtttca gaaggttttg agaaaagatt gcaattgata ggtgtgggtt atcgtgctca
     7381 agcacaaggt aaaatcttga atctgtcttt gggtttttct catccgatcg tatatgaaat
     7441 gcctgaaggt gtctccgttc aaactcctag ccaaacagag attgttttaa ccggctcgga
     7501 taaacaagtt gttggtcaag ttgctgctga gattcgtgcg ttccgtgctc ctgagcctta
     7561 taaaggtaaa ggtgttcgct atgtaggaga agtagtggta atgaaagaag ccaagaaaaa
     7621 ataattgagg ttcactaatg gataaacata caacccgact ccgtcgtgca cgcaaaaccc
     7681 gtgctcgtat tgcggacttg aaaatggtaa gattatgtgt gttccgaagc aataatcata
     7741 tttatgctca agtaattagt gctgaaggtg ataaagtatt ggctcaagcc tctacattgg
     7801 aagctgaggt gcgcggtagt ctgaaatctg gaagcaatgt tgaagcagct gcaatagttg
     7861 gtaaacgtat cgctgagaag gctaaagcag caggtgtaga aaaggttgct tttgatcgtt
     7921 caggtttcca atatcacggt cgtgtgaagg ctttggctga agctgctcgt gaaaatggtt
     7981 taagcttcta aatatttgga gactttcaga tggcaaaaca tgaaattgaa gaacgcggtg
     8041 acggtctgat tgaaaagatg gtcgcagtta accgtgtaac caaagtagtt aaaggtggtc
     8101 gcattatggc tttctctgcg ctaactgttg ttggtgatgg agatggtcgt attggtatgg
     8161 gtaaaggtaa gtcaaaagaa gtgcctgttg cagtccaaaa ggcgatggat caagcacgac
     8221 gctctatgat taaggtacca ttaaaaaatg gtacgattca tcatgaggtt attggtcgac
     8281 atggtgctac taaagtattt atgcagcctg ctaaagaggg tagtggcgta aaagccggtg
     8341 gacctatgcg tttggttttt gatgctatgg gcattcataa tatctccgcc aaagtgcacg
     8401 gatctactaa cccatataat atcgtacgtg caacattaga tggtttgtct aagttgcata
     8461 ctcctgctga tatcgcagcc aaacgtggct tgacagtgga agacattttg ggagttaacc
     8521 atggctgaac aaaaaaagat tagggttaca ttggttaaaa gcctgattgg tacaattgaa
     8581 tctcatcgtg catgtgcacg cggtttaggt ttgcgtcgtc gcgagcatac ggtagaggtt
     8641 ttagataccc ctgaaaaccg tggtatgatt aataaaatca gctacttgtt gaaagtggag
     8701 tcttgatatg tttttgaata caattcaacc tgctgttggt gctacgcatg ctggtcgtcg
     8761 tgttggacgc ggtattggta gtggtcttgg caaaacgggt ggtcgtggtc ataaaggtca
     8821 aaagagccgg tctggtgggt ttcataaggt gggtttcgag ggtggtcaaa tgcccttgca
     8881 acgacgcctc cctaaaagag gttttaaatc tttaacagca tcagctaatg cacagcttcg
     8941 tttaagtgaa ctggaatcaa ttgctgttaa tgagattgat attttggtct taaagcaagc
     9001 gggtctgatt gcatctacag tctctaatgt taaagttatt gcttctggtg aaatttctaa
     9061 ggcagttgct ttgaagggta ttaaagttac caaaggtgcg agagctgcta tcgaggctgt
     9121 tggtggtaag attgaaatgt aaggtttaat attgtggcta atcaacaaac gtcatcaggt
     9181 tcatccaaat ttggagatct taagaaacgt cttttgtttc tatttggagc attgattgtt
     9241 tttcgaattg gtgcccatat acccgtacct ggagttgatg ctgttgcttt agctaaatta
     9301 tacgaaagcg ctggaaacgg catcctggga atattgaata tgttttccgg tgggtcgtta
     9361 gagcgcttta gtatatttgc aataggaatt atgccatata tttcagcttc tattattgta
     9421 cagctcgctt ctgaaatttt gccatcattg aaggctttaa aaaaagaagg ggaggctggt
     9481 agaaaggtaa ttacgaaata tactaggtat ggtactgttt tgttagcaat tcttcaaagt
     9541 ctaggtgttg catctttcgt atttcagcaa ggaattgttg taacaagttc atttgagttt
     9601 catgtttcca cggtagtttc tttggtaacg ggaaccatgt ttcttatgtg gcttggggag
     9661 caaattactg aaaggggtat cgggaacggt atttctttaa tcattacggc aggtattgct
     9721 tcaggtattc cttcgggtat tgcaaagctg gttacactga cgaaccaagg ttctatgagc
     9781 atgcttacgg cgttgtttat tgtatttggt gccttattat taatttattt ggttgtatac
     9841 tttgaaagtg cacagcggaa gattcctatt cattatgcaa aacgccagtt taatggtagg
     9901 gcgggtagtc aaaatacgca tatgcctttc aagttgaata tggctggtgt tattccccca
     9961 atttttgctt ccagtattat tctatttcca tctactcttt taggttggtt tggttcggct
    10021 gatacaaata gtgttttgca caaaatagct ggattgttac aacacggtca attgctgtat
    10081 atggctttat ttgcagcgac agttattttc ttttgttatt tttatacggc tttggttttt
    10141 agccctaaag aaatggcaga gaatttaaaa aagagtggtg cttttgttcc tgggattaga
    10201 cctggtgagc agacctctag gtatttagaa aaagttgtat tacgtttgac attgtttgga
    10261 gctctttata ttacaactat ttgtttaatt ccagagttct taactacggt tttaaatgta
    10321 cctttttatt tgggtggcac gtctttgttg attctagttg ttgtaacgat ggattttagt
    10381 acacaaataa attcgtatag gcttactcaa cagtatgata agttaatgac tcgttcagaa
    10441 atgaaatcat tttctcggaa atagaattat ggcgaaagaa gatactatcc aaatgcaagg
    10501 tgaaattctt gaaactttac ctaatgcaac atttaaagta aaacttgaga atgaccatat
    10561 tgtattgggt catatttctg ggaagatgcg gatgcattac attcgtattt ctccgggaga
    10621 taaggtcaca gtagagctga caccttatga tctaactagg gctcgaatcg ttttcagagc
    10681 aagataaacc aataaaagga aaataaaatg cgtgtacaac catctgttaa gaaaatttgc
    10741 cgaaattgca agattattcg tcgaaatcgt gtagttcgtg taatttgtac tgatctccgt
    10801 cacaaacagc gtcaaggtta atggaatatt tcttttaatg tgattctgtg atatagtgac
    10861 acactttgcc ctaaaaagga aaaaatatgg ctcgtattgc aggggtaaat atccctaata
    10921 acgcacacat cgtaattggt cttcaggcta tttacggtat tggtgctact cgtgctaaat
    10981 tgatttgtga ggctgcaaat attgcgcctg atactaaagc aaaagatttg gacgagactc
    11041 aattagatgc tttgcgtgac caagttgcca agtatgaagt agaaggtgat ttgcgtcgtg
    11101 aggtaactat gagtatcaag cgattgatgg acatgggctg ctatcgtggc ttccgtcatc
    11161 gtcgcggctt accatgccgc ggtcaacgca ctcgtacaaa tgcgcgtacc cgcaaaggtc
    11221 cgcgtaaagc gattgctggt aagaaataaa ttttaaggaa ttttattaat ggctaaagca
    11281 aacacagctt cacgtgtacg taaaaaagta cgtaaaaccg tgagtgaggg tattgtgcac
    11341 gttcatgcat ctttcaacaa taccatcatt acaatcactg accgtcaagg caatgcgttg
    11401 tcttgggcta cctctggcgg cgctggtttt aaaggttctc gtaaaagtac accatttgca
    11461 gcacaagttg cagcagaagc agctggtaaa gttgcccaag agtatggcgt taaaaattta
    11521 gaggttcgta ttaaaggtcc aggtccaggt cgtgaatcct ctgtacgtgc tttgaatgct
    11581 cttggtttca agattaccag cattactgac gttaccccgt tgcctcataa cggttgccgt
    11641 ccgcctaaaa aacgtcgtat ttaatattgg agtgatttga aacatggcac gttatattgg
    11701 ccctaaatgt aagttggcac gtcgcgaagg tacggatttg tttttgaaga gtgcgcgccg
    11761 ctctttggat tctaaatgta aaattgattc cgctcccggt cagcatggtg caaaaaaacc
    11821 gcgtttgtca gactatggtt tgcagttgcg tgaaaaacaa aaaatccgcc gtatttatgg
    11881 cgtattagaa cgtcagttcc gtcgttattt cgcagaagct gatcgtcgta aaggttctac
    11941 cggcgagttg ctgttgcagt tgctggaatc tcgtttggat aatgtcgttt atcgtatggg
    12001 tttcggttct acccgagctg aagcaagaca gcttgtttct cataaggcga tagttgtgaa
    12061 tggacaagtt gtcaatattc cttctttcca agtgaaagct ggtgatgttg tctcagttcg
    12121 tgaaaaagcc aaaaaacagg tacgtattca agaagcattg ggtttggcaa ctcaaatcgg
    12181 cttgccgggt tgggtttctg tagatgcgga taaacttgag ggtgtgttca aaaacatgcc
    12241 ggatcgctcg gaattgaccg gtgatattaa tgaacagctg gtggtagagt tctactctaa
    12301 ataatgctag ctcagtgagg gacagttaaa tgcagaatag cacaaccgaa tttttgaaac
    12361 ctcgtcaaat tgatgtaaat actttttctg caactcgtgc aaaagtatct atgcagccat
    12421 ttgaacgtgg tttcggtcat accttaggta atgctttgcg ccgtatctta ctgtcatcca
    12481 tgaatggttt tgctcctact gaagtagcta ttgccggtgt attacacgaa tattctactg
    12541 ttgatggtat tcaggaagat gttgttgaca ttttgctgaa tattaaaggt attgtgttta
    12601 aactccatgg tcgtagccaa gttcaacttg tgttgaagaa atcaggttca ggtgtcgtat
    12661 ctgccggtga tattgagttg ccgcatgatg tagaaattct gaatcctggt catgtcattt
    12721 gtcatttggc tgataacggt caaattgaga tggaaattaa agtagagcaa ggtcgtggtt
    12781 atcaatctgt ttcaggtcgt caggtagttc gtgatgagaa ccgtcagatt ggtgcaatcc
    12841 agttggatgc gagcttttcg cccatcagcc gtgttagctt tgaggttgaa cctgcacgtg
    12901 tagagcagcg gacggatctt gataagttgg ttttggatat cgaaaccgac ggttctattg
    12961 atcctgagga agctgtacgc agtgcggcac gtattttgat tgatcagatg tctatttttg
    13021 ctgatttgca gggtacgcct gtggaggagg ttgaagaaaa agcacctcct atcgaccctg
    13081 ttcttttgcg tccggtggat gatctggaat tgacagtacg ttcagctaat tgtttgaaag
    13141 ctgaggatat ttattatatt ggcgatttga ttcaacgcac tgaaaccgag cttcttaaaa
    13201 cgccgaattt gggacgtaaa tctttgaatg agattaagga agtattggca tctaaaggtt
    13261 tgacactggg ttctaagttg gaagcatggc cacctgtagg cttggaaaag ccttaatgaa
    13321 gaattaaagg ataattgata tgcgtcatcg taatggcaat cgcaaattaa accgtaccag
    13381 cagtcatcgt gctgcaatgc tgcgtaatat ggcgaattca ttattgactc acgaaactat
    13441 tgtaacaact ctgcctaagg ccaaggaatt gcgccgtgta gtagagccgt tgattacatt
    13501 gggtaaaaag ccgtcattgg caaaccgccg tttggcattt gaccgtactc gcgaccgtga
    13561 tgttgtagta aaactgtttg gcgatttggg tcctcgtttt actgctcgta acggtggtta
    13621 tgttcgggtg ttgaaatacg gattccgtaa aggtgataat gcacctctgg cactggttga
    13681 attggttgac aaaccggctg ctgagtaatt ttagtcatat aacgccatct gccgaaaagc
    13741 aggtggcgtt atttttgcaa tatctgatag gtaatagggt attggctatc atgtttaaaa
    13801 tattaattga atagctaagg tttgcgcggt aaacttacat cattaaaaaa ttctatgatg
    13861 gtttatataa tgaatgcctt cgatataaag tcgacaaaga tggacgtatt gtctatatct
    13921 ttgcatacat cagacttgtt tgatttggaa gatgtgctgg tcaaattggg caagaagttt
    13981 caagagtctg gtgttgttcc atttgttctg gatgttcaag agtttgatta tcccgagtct
    14041 ttggatcttg ctgcattggt ttcgttgttt tcaaggcatg gtatgcaaat tttgggtctg
    14101 aagcattctg atgaacgttg ggctgctgcg gctatgaagt atcatttgct gttttgtctg
    14161 tctcattcgg aaaatgttaa agaactgggt caggttgagg tgcagaaaac ggaggatggt
    14221 cagaaagcaa ggaaaacagt attgattaca tcccctgtcc gtaccggtca gcaggtttat
    14281 gccgaagatg gcgatttgat tgttacgggg gcggtcagcc agggggcaga attgattgcg
    14341 gatggcaata tacatattta tgcgccgatg agggggcgtg ctttggccgg cgccaagggt
    14401 gatacttctg cccgcatatt tatccactcc atgcaggcag aactggtttc tgtggcgggt
    14461 atttaccgta attttgaaca ggatttgccg gaccatctgc acaagcagcc ggtacagata
    14521 ttgttgcagg ataaccgatt ggttatcagt gcaattggct cagagtaatt gtttgatatt
    14581 ttaaaaagga aatattgtgg caaaaattat tgtagtaact tcaggtaagg gcggtgtcgg
    14641 taaaacgact accagtgcca gtattgcgac aggtttggca ttacgcggat ataaaactgc
    14701 ggtaattgat tttgatgtgg gtttgcgtaa cctcgacctc attatgggtt gcgagcgtcg
    14761 tgtcgtttat gacctgatca atgtcattca gggggaggcg acgctcaacc aggctttgat
    14821 taaagataaa aattgtgaaa acctgtttat tttgccggct tcccagactc gggataaaga
    14881 cgctttgaca cgcgagggcg tagaaaaagt gatgcaggag ctgtccggca agaaaatggg
    14941 ctttgagtat attatttgcg actctcctgc cggtattgag cagggtgcat tgatggcgtt
    15001 gtattttgct gatgaagcca ttgtaacgac caatcccgag gtttccagtg tgcgtgactc
    15061 cgacaggatt ttgggaattt tgcaaagcaa atcccataag gcagagcaag gcggttcggt
    15121 taaagaacat ctgttgatta cgcgttattc tcccgaacgt gtggcaaaag gcgaaatgct
    15181 gtctgtacag gatatttgcg atattctgca tattcctttg ctgggtgtga ttcccgaatc
    15241 ccaaaacgtc ttgcaggcat ccaattccgg agaaccggtc atccatcagg acagcgtggc
    15301 ggcttccgag gcatataagg acgttattgc ccgtcttttg ggcgagaacc gtgaaatgcg
    15361 tttcttggaa gctgagaaaa aaagcttctt caaacgtctg ttcggaggat gaggtatgtc
    15421 attaatcgaa cttttattcg gcagaaagca gaaaacggca accgttgccc gcgaccgcct
    15481 tcaaatcatc attgcccaag agcgcgccca agaaggtcag gctccggatt acctgccgac
    15541 tttacgtaaa gagttgatgg aagtcctgtc caaatatgtg gatgtttcat tagacaatat
    15601 ccgtatttcc caggaaaaac aggatggtat ggatgtgctt gagttgaaca ttactttgcc
    15661 ggaacagaaa aaggtatagg acatgacctt aaccgaattg cggtacatcg tcgcagtcgc
    15721 ccaagaacgt catttcggca gggcggcgcg gcgttgtttt gtcagccagc ccactttgtc
    15781 tattgccatt aagaaattgg aagaagagct tgccgtctct ttgtttgacc ggagcagcaa
    15841 cgatattatt acgaccgagg cgggggaacg tatcgttgca caggcgcgta aggtgttgga
    15901 agaggcagag cttatcaggc atttggcaaa tgaagaacaa aacgagctgg agggtgcgtt
    15961 caaactcggg ctgattttta cggttgcgcc gtacctgctg ccgaaactga ttgtctcgtt
    16021 gcgccgtact gcaccgaaaa tgcctttgat gttggaagag aattacacgc atactttgac
    16081 cgagtcgctc aaacgcgggg acgttgacgc gattatcgtt gccgaaccgt ttcaagagcc
    16141 gggcattgtt accgaaccct tgtatgacga accgtttttc gtgattgtcc cgaaagggca
    16201 ttcatttgag gaactggatg ccgtttcgcc acggatgctg ggtgaggagc aggttttgct
    16261 gctgacggaa ggcaactgta tgcgggatca ggtactctca agctgttccg aattggcggc
    16321 gaaacaacgc atacaggggt tgaccaatac attgcagggc agctcgatca atacaatccg
    16381 ccatatggtc gccagcggtt tggcaatcag cgtgttaccg gcaaccgcgc tgaccgaaaa
    16441 cgatcatatg ctgttcagca ttattccgtt tgaaggtacg ccgccaagcc ggcgggtcgt
    16501 attggcgtac cgccgcaatt ttgtccgtcc gaaggcgttg tcggcgatga aggcggcgat
    16561 tatgcagtcg cagcttcacg gggtaagttt tatccgcgac taggcgcagg cattgttttc
    16621 aaaacgccat ttccctgagc cgacaacacg gtatgccaag atattgccgt catcatcgat
    16681 tttgagtata gcatcgccac ggaaactgcc gtcctgaaga tattcgactt ttgcatcact
    16741 gtgaatgttt tcatcagtgc cgatgcaatg ccatgtatag tggattaaca aaaaccagta
    16801 cggcgttgcc tcaccttgcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg
    16861 atttttgtta atccactata aaagaggccg tctgaaaaac atttttcaga cggccttgtt
    16921 gattcaatca aatcagtctt tcaacttcga caactgagtt tgcacttttg ccattttgtc
    16981 ttccaattcc gccaaatcgg ctttgtcttt ttccaccaaa tgcgccgggg ctttttcggt
    17041 gtagccgggt ttggagagtt tggcgttgag tttgtccaag gctttttgca gcttctcggc
    17101 ttctttgctc aaacgggcgg tttcggcagc tttgtcgatt tcgactttca acatcaggcg
    17161 cgcgccgttg cagacggcga cgggcgcgtc ttcgctttcg ggtagggcgg cgacttgctg
    17221 tgcttcggtc aggcgggtca tcatcggcag gtatttgagg tagtccgcca agtcgtctgc
    17281 gctttcgaca aacagcgggg ctttcacgtt gggctggatg cccatttcgc cgcgcaggtt
    17341 gcggactgcg ccgatcaaat cctgcaacac ggtcatttgc ccgaatgccg tctgaacaat
    17401 ctcgccgccg tcggcttcgg ggaagcgggc gagcatgatg ctgtcggcgg ttttcgcgtc
    17461 gcacataggg gcgacggttt gccacagttc ttcggtgatg aacgggataa tcgggtgcag
    17521 caggcgcagg gcggcttcga gtacgcgcaa taaggtatgg cgtgtggcgc gttggcggct
    17581 ggcgcagccg gtttgaagct gcactttggc aagttccaaa taccagtcgc aatagtcgtt
    17641 ccacacgaag ctgtacaggg tttccgccgc caaatcaaag cggtaggttt cgtaggcttg
    17701 cgtaacctgc tcgatggtct gattcagacg gcctacaatc cacatatcgg ggaaggaata
    17761 gccgcgcggt tcggtggcgg ttgcgccgta gccgcagtct tggttttcgg tgttcatcaa
    17821 gacgaagttg gtggcgttcc agattttgtt gcagaagttg cggtagcctt cggcgcgttt
    17881 gaagtcgaag ttcacgctgc gccccaagct ggcgtagctc gccatggtga aacgcaatgc
    17941 gtccgcgccc atactcggaa tgccttcggg aaagagtttt ttggtggctt cttccacttt
    18001 cggcgcggtt tcgggtttgc gcagaccggt ggtacgtttc accagcagtt tttccaagtc
    18061 gatgccgtcg atcaaatcca cagggtcaat gacgttgcct tcggatttgg acattttttt
    18121 gccttcgtgg tcgcgcacga tgccgtggat gtacacgtct ttaaacggta ctttgccggt
    18181 aaagtgggtg gtcatcataa tcatgcgcgc cacccagaag aagatgattt cgtagccggt
    18241 gaccaagacg ttggacggca ggaaggcttt gagttcgtcg gtttcagacg gccagccgag
    18301 cgtggagaac ggcacgagtg cggaggagaa ccatgtgtcc aatacgtctt cttctcgggt
    18361 caagcctgtt ttgccggctt gtttttcggc ttcttcctga ttgcgggcaa cgtacacatt
    18421 gccttcgttg tcgtaccatg cagggatttg atgcccccac cacagttggc gcgagatgca
    18481 ccagtcttgg atgttgttca tccattggtt gtaggtgttg acccagtttt cggggataaa
    18541 gcgcaccgcg ccgctgtcga cggctttttt ggctttgtca gcaaggctta agcctttgaa
    18601 ttcgctgtca ggctcgccgc cgtttggcgt ggcggacatg gcgacaaacc attggctggt
    18661 cagcatcggc tcaatcacgg aaccggtacg gtcgcctttc ggcgtcatca gcgtgtgcgc
    18721 tttgatttcg accaagaaac cttgttcctg caaatcggca accatttgtt tgcgcgcggc
    18781 aaagcggtcc aagcctgcgt atttttcagg cagggcaaag cttggttgcg cttcgccttt
    18841 gaagttgaac acttcggcgt ttgccaatac tttggcttcc aagtcgaaca cattaaccaa
    18901 gcgcgtatcg tggcgtttgc cgacttcgta gtcgttgaag tcgtgcgcag gcgtgatttt
    18961 cacgcagccg gtgccgaagt ctttttcaac gtattcgtcg gcaatcacgg gaatggtgcg
    19021 gccggtcagc ggcaggatta attctttgcc gattaagtgg gtataacgtt cgtcttcggg
    19081 attgacggca acggcaacgt cgcccaacag cgtttcggga cgggtggtgg cgacgatgac
    19141 ggcttcggca ggattgtccg ccagcggata gcggatgtgc cacatagagc cttgttcttc
    19201 cacgctttcc acttccaaat cagacactgc ggtacccaat accggatccc agttcaccaa
    19261 gcgtttgccg cgataaatca agccctgttc atacaggcgt acgaacactt cggttacggt
    19321 ttcggcgcgt acatcgtcca ttgtgaaata ctcgcgcgtc cagtcggcag aacagcccac
    19381 acggcgcatc tgctgcgtaa tcgtgccgcc ggaaacttct ttccattccc acactttttc
    19441 caagaatttt tcacgaccca agtcatgacg ggacacgttt tgcgcggcaa gctgacgctc
    19501 gaccacgatt tgcgtggcga tgcccgcgtg gtcggtgccg ggaatccagg cggtgttgca
    19561 gcctttcatg cggtagtagc gggtcagacc gtccataatg gtttggttga aggtatggcc
    19621 catgtgcagc gtgccggtta cgttgggcgg cggcagttgg atggaaaaag acggtttggt
    19681 caaatccata tcgggctgga aataaccttg gctttcccag ttttgatagt gtttggattc
    19741 gatttcggcg ggggagtatt tgtctaacat gatggaactt tgtgaaatta aggttatttt
    19801 tgatgtgcgg attataacgc aaaaaggccg tctgaatcat ttcagacggc ctttggcata
    19861 cgggttttaa aaatggaaca ataccaggct gacggcaatc accgccatac ccgttgtcag
    19921 gccgtaaacg gtttcatggc cgtctgaata gcgtttggcg gccggcagca gctcgtccaa
    19981 cgccaaaaac accatcacac cggctatcac gccgaatacc gaaccaaaca cggcaggcga
    20041 caaaaacggc tgcaaaacca aatagcccaa agccgccccc aacggctcgg ccaagccgga
    20101 tagcagacac gcccacaccg ttttcttacg gctgcgggtg gcaaaataaa ccggcgcggc
    20161 gatggaaatg ccctccggaa tattatggat ggcaatcgcc aaggccaaag gcatcccgac
    20221 cgccggattt tccaatgtgg caaaaaacgt cgccaagcct tcggggaaat tgtgcgcagt
    20281 aatcgcaaac gccgccatca tgccgactcg cgcgatatgg cggcgtttgc tttcttgaaa
    20341 cgacgggtct tgcgcgtcta aagtttcatg cgggttcggc accagacggt caatcagcgc
    20401 aatgccgccc atcccggcca aaaatgccat ggtcgccgcc gcaaacgcgt ggtctttatc
    20461 ataaatttca gcgaacgcct cgctggactt actgaaaatc tccgtcaggg aaacatacac
    20521 cattgcaccg ccggcaaatg ccaaaccaaa cgacaacaca cgcggattgg gcgttttgga
    20581 aaacattacc aagccgctgc ctaatacggt aaacaaaccg gcagccaacg tgatggaaaa
    20641 ggcaacggcc aaattggaca tcgaaaaatc gggcatgaga aaacctgcgc taaaagctgg
    20701 gacaggttca gactaacact ttttaatgcg tatgataata gttattattt attttattgg
    20761 ttggatacac ggattttgaa acaaaaggcc gtctgaaaaa tagttttcag acggccttta
    20821 catttgaaat gccactaaac cttatcgctt tccagcttaa gcctgatagc gcgacaggct
    20881 caaatcgtcg ctgcggattt cggtgtcttt gccgctcacg atatcggcgg ttaattttgc
    20941 cgaacccagc gacatggtcc agcctaaagt accgtggccg gtattcagaa acaggttgtc
    21001 aaagtgggtg cgaccgatta acggcgtgct gtcgggcgtc atcggtctga ggccgctcca
    21061 gaacgatgct tggctcaaat cgccgccttc cgggaacaag tcgttgacga ccaaagccaa
    21121 ggtttcgcgg cgtttttcgg gcagtttgat ttcgtagccc gacaattctg ccatgccgcc
    21181 gacgcggatt ctgttgtcaa agcgcgtgat agcgactttg tagctttcat ccaaaacggt
    21241 ggacaccggc gcgccgtctg aattggtgac cggcagggtc aaggaatagc ctttgacggg
    21301 ataaatcggc agatcgaggt ctaactgcgc caacacagtc ctactgaagc agccgagcgc
    21361 acagacaacg gcatctgctt caaaccgccc tgttttggtt tcaacggctt tgatgcgcag
    21421 cccgttatgg tcgatgcggc tgatggtttg gttgaaatga aactgtacgc ccttttcctg
    21481 acacaatttg tataggtttt cggtgaagag gtggcagtcg ccggtcgcat ctgcaggcag
    21541 gtgcaggccg ccggcaattt tggcggtaac gcgtgccagc gcaggctcaa attctgcaca
    21601 ttcttcgggt ttcagacggc ggtacggcac gccgtagcgt tccaaaacgg caatgtcttg
    21661 ttctgccgct tcaacttctt tagcctgacg gaaaatctgc aacgtccctt ttttgcgttc
    21721 ctcaaaattc atgccggttt gcgcttcaaa acggcggaac atttcacggc tatattcgga
    21781 aatcctgacc atgcgctctt tattggtttg atagtgcgct gccgtgcagt tttgcagcat
    21841 ttgccacagc cattcgattt gatacaggct gccgtcgggg cgaaacagca aaggcggatg
    21901 gcttttaaac agccatttca gtgctttggt cggaataccg ggtgcagccc aaggcgtggt
    21961 atagccgtaa gaaagctggc ctgcattggc aaaactggtt tccatcgcca caccctcggc
    22021 gcggtcgatg accgttactt catgtcctgc ctctgccaga taccacgcgg aagacacgcc
    22081 ggcaacaccc gcacctaaaa caagcacttt catgtttctc cctccggctt tttcaaaaca
    22141 gacttaatat gccgtgccgt ctgaatattc ggattcagac ggcctcggat attaatgcgg
    22201 caattcgcca tttgtgattt tttgtttgaa gtcgcgcgtt tcattgacga tgactttcgc
    22261 catcaataaa agtgcaatca ggttgggcaa tgccatcaag ccgttgaatg tgtccgaagc
    22321 cagccacacc aaatcaaggc tcaacacggt acccagcata acggaagaaa cataaccgac
    22381 gcggtacaaa ccggcaaatt tctcgccgaa aacatacacc gcgcattttt cgccgtaata
    22441 gcaccagccg agaatggttg agtaggcaaa gaaaatcagg ccgatggtaa caatccagcc
    22501 gccgatgccg ggcagcattt tttggaatgt gacggttgtc agtgccgcgc cgctcacttc
    22561 aggtttgaca aactcgccgc ccgcgccgag cagtcccatt accaacacga tgccggtaat
    22621 cgagcaaacg acgatggtat ccaaaaacgt accggtcata gaaaccaagg cctgacggac
    22681 gggatggtcg gttttcgcgg ctgcggcggc aataggcgca gaacccatac ccgcctcatt
    22741 ggagaacacg ccgcgcgcca cgccgtagcg gatgaccgta ccgatagcgc cgcccgccac
    22801 tgcctgcgcg ctgaacgcat cggagaaaat cagcttgacg gcaggcatca gtgcatcgga
    22861 attaatcgcg ataatggaaa gaccgcccaa cacataaaac accgccatag caggcacgat
    22921 gaaagaagcg gctttggcga tgcctttaat accacctaaa acgacaacgg cagtcagaac
    22981 ggtcaacgta atgccggtat aggcaggttc gataccgaag ctggtttgca ccgcctgtgc
    23041 aaccgagttg gactgcaccg agctgccgat accgaaggaa gcgaatgtgc cgaacagcgc
    23101 aaatgcaacg gccatccatt tccagttttt gcccaagcct ttttcgatgt aatacatcgg
    23161 gccgccggac atttcgcctt tggaattgtt gacgcggtat ttcaccgcca acacgccctc
    23221 gccgtatttg gtggccatac cgaaaatggc ggttatccac atccaaaata ccgcgcccgg
    23281 gccgccggtt accaccgcag tcgccacgcc ggcgatgttg cccgtaccga tggtggcgga
    23341 cagcgcggtc atcaacgccg caaaatggga aatatcgcct tcgtggcctt cgccgccttc
    23401 atacttcttt gacggcacaa acgcctgttt cagcgcatag cccaacatag tgaactgcaa
    23461 gcctttcagc aaaacggtca gcacaatgcc cgtgccgacc agcagcatca acataacaga
    23521 tccccagacc cagccgctga cggtttcgaa aaaggctttg agattgtcta aaaacaattg
    23581 catggctttc tcctttgtct gttttatttt taaaacacca cttttgtagt gtcctataat
    23641 ttcagcacag aatattcaat aagacaatat gttcttttga aaaatacttt tggttttttc
    23701 gccgaaagca ggtcggttca agctgcggaa attgtttgca attctttaaa agcagcggcg
    23761 gaggtcacaa tgaaatgtcc gaatggggat gtggcgggcg gcagaaatca tcaatgctgc
    23821 cgactgccat acttctgaaa tctacaaaat gatgcatcga tcaaacaata taccgcttta
    23881 aaaaaaccga tgccgtctga aacgctttcg gggcttcaga cggcatcaaa aggatacggt
    23941 cagcggatga tgccgcgcgt cgattgtgcg aaaaagtctc ggaatacggc aagctcggct
    24001 tgggtttcgg cgcggcggag gatgtctgcc ttggcctctt caaacggaat gccgcgatgg
    24061 tagagggttt tgtacacgtt tttgacggcg gaaatctgct ctgcggtaaa accgttgcgg
    24121 cgcatgcctt cgctgttgag ccccgccggt tcggcgcggt agcccgatgc cataaagtag
    24181 ggcggcacgt ctttgtgtac gcctgcggca aacgcggtca tggcgtagtc gccgatgcgg
    24241 cagaattgga aaaccagcgt gtagccgccc aaaacgacgt agtcgccgac ggtaacgtgt
    24301 ccggcaagcg aggcgttgtt ggcgaagatg gtgtggttgc cgaccacgca gtcgtgcgcg
    24361 aggtggcagt acgccataat ccagttgtcg tcgccgatac gggtttcgcc gatgccggtt
    24421 accgtgccta aattaaaggt ggtgaattcg cggatggtgt taccgttgcc gataatcagc
    24481 ttggtcggct cgtcgcggta ttttttgtcc tgcggaattt cgccgaggct ggcaaattgg
    24541 aaaatgcggt tgttttcgcc gatgctggtg tggccgttga tgacggcgtg cggaccgatt
    24601 tcggtattcg caccgatttg gacgttgggg ccgataacgg tgtacgcgcc gactttgacg
    24661 ccggagtcga gttcggcttt ggggtcgatg acggcggtcg ggtggatgag ggtcatgttt
    24721 tgaatactcc gctgcttgtt aagacaaata atagaaaatt acagtttgtc gatttcatcg
    24781 cagaccgcaa tcacttgatc gctaaaatgg ctaaatactg aagcagtatc tacatccatg
    24841 taattaagca gttcaaaaat agattggtga atatttctag cgtagttggt atcttttatt
    24901 gcacctttaa aacaaatcgg ctcgtgatgt gccaaacgat tacggaattt gttaatattg
    24961 gaaagttctc gaaaaatcca tttttggtta tattgcacac ttggtgtaga tttgggcttt
    25021 tttggaaaaa ctttcatcaa tactttccct gtaacatcaa attgggcatc tttccctcct
    25081 gcaaacagat accgccaaaa accgaatcct agtcctgcaa ccaattggtt gtggtcaaac
    25141 tttcccccgc tattattttg tattttagat aatgcaacct tgattaattc agcagattct
    25201 ttcgtgccat ttcttaaaaa gcaaccttga tattttaatg cgggattcgt ctgtggctgt
    25261 atgctgttat ataaccagtt tctgtcttta aacgcctgct gaaggcaaat gtcaattttg
    25321 tttcttaaaa caatctcaaa tattgaaaca acatgaaaaa gttctcttga taaagataaa
    25381 ttcaataaat acaattcagc tgctttgtct tccccaacgg catttttata ccgttccatt
    25441 ctgaaatcag aaaaaatact acagcattcc ttataatcca cgctaacacc tgattcttta
    25501 tttttaaatt gacgtttcaa actatatttg atacagttag gtaaaactaa tccccaccgt
    25561 gtccctgggt ttgaataaac ctaaaccggt gggttttctt tttattaggt cgtctgaaac
    25621 tttcagacga cctttttctg aacactcaaa ccacgcgttt ggcacacatg atgatggctt
    25681 cgacggcgac ttgcccgtcc actttggcaa cggcgttgaa tttgccgatg ccgcgccggc
    25741 tggtcagcag ctcgacttca aagacgagtt ggtcgccggg gatgacttgg cgtttgaagc
    25801 gggcttcgtc tatgccggcg aagaagaaga attcgttttc tttgcgcccg ccctcgctca
    25861 aaatcgccaa cgtgccgcac gcctgcgcca tcgcttcgat gatgagtacg ccgggcatca
    25921 cgggcaggtc gggaaagtgg ccttggaact gcggttcgtt tatggttacg tttttgatgg
    25981 cggtcagggt tttcatcggc tcgaaggcgg tgatgcggtc gagctggaga aacggatagc
    26041 ggtgggggat gagtttttgg atgtctttgg cttcgatggg gagttgtacg tccatgttcg
    26101 tcgtattcct tgaataaagt cggtttggtt atttgctgtc ttgaccggca tctgaaagct
    26161 gctgctccag tgttttgagg cgtttgttca tttcgcttaa gcggtggatg taaacggcgt
    26221 tgcgcgccca ttctttatgg gtggacatcg ggaagatgcc ggcgaggtgt ttgccgcttt
    26281 cggtaatgct gtgggtgacg gacgtgccgc cgccgatggt ggttttgtcg gcgatttcga
    26341 tgtgtccgac cgtaccgacc ccgccgccga tgatgcagta gctgcctatg gttacgctgc
    26401 cggagatgcc ggttttggcg gcgatgacgg tgtgcgaacc gattttgcag ttgtgcccga
    26461 tttggacttg gttgtcgatt ttggtgccgt tgccgacggt ggtgtcgctc atcgcgccgc
    26521 ggtcgatgtt ggtgttcgag ccgatttcta cgtcgtcgcc cagcgttacc gcgccggttt
    26581 gcgggatttt gaaccacgaa tcgccggcaa aggcgagtcc gaaaccgtcc gcgccgatga
    26641 ccgcgccgct gtggatttcg acgcgtctgc cgagtgtgca gccgtaataa acgacggcgt
    26701 tgggatgcag gacgacttcg tcgcccagtc tgcaatcgtg ttggacgacg gcgtttgcca
    26761 agatgcggca gccttcgccg agtacggtgt tcgcgccgat gtaggcgttc gcaccgattt
    26821 cgcagcttgc ggggacggtc gcgcccggtt cgacgacggc ggtcggatgg atgccgccgc
    26881 gcgctttgac gacgggtgaa aacaggcgcg cgactttggc gaaatagaga taggggtcgt
    26941 cggcgacaat caggttgcgc ccttcaaatc cgtctgccgc tttggcggaa acgatgaccg
    27001 cgcccgcgct gctgtcgtgg acttcggctt tgtatttcgg attggcaagg aagctgatgt
    27061 gttccgcctg cgcgtctgcg agcgggcgca cggcggtaac ggaaatgtcc tcgccgcgcc
    27121 attcgccgcc gagccgcgcg gtgatttggg acagggtgta ggtggccgga atcatggttt
    27181 tcctgttcgg tatgccgtct gaaagggtca gcgggcgttc atttctttaa tgacgctgtc
    27241 ggtaacgtcg tattgggtgt tgacgtaaat cacgttctgc aaaatgacat cgtaaccttc
    27301 ctgtttggcg attttgacga tgacgcggtt ggcgttttgc tggagggagg caaactcttc
    27361 gttgcggcgg aggttgtagt cttcttcaaa ctgcgcctgt tttttgcgga acgctgcgac
    27421 cagcccgcgc catttttctt cggcttgcac cttttttgcg tttctgagtt tgccttcggc
    27481 aagctgcctt tccaaatcca gaccttcgcg ttgcagtttt tgcaattcgt cctgacgagc
    27541 ggaaaattcg ctgtccagcg ttttttgaat cttgcgcgcc tgcttggatt cgaggtagat
    27601 gcgctcggtg ttgataaagc cgattttttg gaaggtgtcg gcgtgcgcgc ctgcggtgca
    27661 gcacaaaccg atcagagccg cggcaaacgc gcgggtcaaa cgggtcatgg taaaactcct
    27721 tcgaatgttg ccgcgaaatg ccgtctgaag ggcttcagac ggcatttgcg ggattagaac
    27781 gtcgtgccga gttggaattg gaagcgttgg atttcgtctt ccggtttttt cttcagcggg
    27841 taggcgtagc tgaatttcat cgggcctaaa ggcgagagcc aggtaaccgc gccgccggcg
    27901 gaatagcgca attcgttggt aaaggtggat ttatgggtat tgccggcgcc gtaaatgttt
    27961 tgaaccctgc cgccggtcgc ggaactgctg ttgtcgtcgt aggttttgcc gtcccacacg
    28021 ctgcctgcgt cggcaaacag gctcaggcgg acggtgcgcg cgtctttcgc gccgggcatc
    28081 gggaagagca gctcggcgga gacgttggct tttttgttgc cgccgtagct gattttttcg
    28141 ccgtattcgt catagacttt cggaccaagt gtgccgcttt cgtaacctcg taccgaaccc
    28201 aggccgccgc cgtagaagtt ttcaaagaag gggatttctt tggttttgcc gtagccgttg
    28261 gcatagccga tttcgccgcc aagcatcagt gtgaaggttt tgctcagggg gaagaaccag
    28321 gtttggttgt gggtggcgga gtagtattgc agtttgctgc cgggcagggc gatttcggcg
    28381 ttcacgcccg tcaggtagcc gcgcgtcggc cataacgcgc tgtcggtttt gttgcgcccc
    28441 cagccgacgg tacctttgta cagccagcct ttgaagctgc cgtctgtgcc gtcggttttg
    28501 ccgtattgtt tgataaagtc ggcatagtgt ttgggcgctt tgttgtaggt gttgacggtc
    28561 aggtgttctg ccaccaaacc gaaattcacg cggtcgtatt cggtaacagg cacgctcatg
    28621 cggatgcctg cgcctgccgt ggtggtttta tattgtttga tgctggtcga tgctttgcgc
    28681 gggtcgaagg cttttccgta aacatcgtag cctaggctga ccccgtctgc cgtgaagtac
    28741 gggtcggtaa acgacagcga gccgttgagc gtggttttgc ttcgtgaggc gcgcagggcg
    28801 gccgacttgc ccgtaccgaa caggttgtct tgggaaacgc ctgcggacat gaccaggccg
    28861 gtatcctgta cccagcccgc gctcaagtcg agcgagccgg tggaacgttc ggtcaggctc
    28921 atgttcaaat cgactttgtc gggtgtgccg gcaagcggga cggcatcaaa ctgtacgttg
    28981 tcgaagtagc ccaaaagctc gacgcgctct ttggagcgtt gcagcttgga ggtgtcgtaa
    29041 ggcgcggatt ccatttggcg caattcgcgg cgcacgactt cgtcgcgggt tttgttgttg
    29101 ccggtgatgt ggatttcgtt gacgtagatt ttccggcccg gttcgatgtg caggacgaaa
    29161 tcgacggttt tggtttcggc gtttggcagc ggctgtacgc tgatttcgct gtatgcgtag
    29221 cctgccgagc ccatgcggtt ctgaatctca cccaaaacgg cggtcatctg ctggcgttcg
    29281 taccatttgc cgggcttcat ggtcagcagt ttttccagtt cggctttggg gacttcgttg
    29341 gtgtcgcctt cgatggagac tttgccccaa cggaaacgtc cgccttcgtg gacggtgatt
    29401 ttgatggtct gcttggtttt gtcttcgttg gtttggatgt cggtatcgag gatgcggaaa
    29461 tcgaagtagc cgttgttctg gtagaagtcg gttacttttt ccatgtcttg ggcaaatttc
    29521 tgctcgttga attggttgct tcgtgtcagc catgtccaaa tgccgccttc ggtcagcgac
    29581 atctgccgca tcagtttgcg gtcggaatag acttggttgc cttcaaattc gatgtcggtg
    29641 attttggcgg atttgccctc gtcaatcgtg atgtcgatgt cgacgcggtt gcgggcgagt
    29701 ttggttactt tgggcgtgat ttggatattg agtttgccgc gcccgaggta ttcttctttc
    29761 aggccggcga ctgcctgatt gagtgtcgcc tgattaaagt attgcgactg cgccagcccg
    29821 aacgattcga ggtttttctt aatggcgtcg ttttgcagca tttttgcgcc ggtgatgttg
    29881 agcgagccga tggtggggcg ttcgataacg gtcagcagga gctgcccgtc cgcagtttcg
    29941 acgcgtacgt cgtcaaagaa accggtggcg tacaggcttt tgatgatggc actgccgtgt
    30001 gtgtcgttgt aggtgtcgcc gactttgacg ggcaggtagt tgaatacggt actcggctcg
    30061 gtacgctgca agccttcgac gcggatgtct tggatggtga agtcggcaag tgccaaaggc
    30121 gatatgccca agaccatcag tgcggaagca atctgtttca gtttcattgt cagttccttg
    30181 tggtgcggaa tgcggtttca gacggcattc cgaaacgtaa aatctaaccg agcagccggg
    30241 taacgtcgtt gaagaaggcg accgccatca tcagcatcat gagggcaagc ccgaagcgca
    30301 aaccgatgtt ttggacgcgt tcgcccaaag gtttgccgcg tatccattcg gcagtataaa
    30361 acacgaggtg gccgccgtcc aaaacgggga cgggcagcag gttcagcacg ccgaggctga
    30421 tgctgaccag tgccaaaaat tccaaataac tttgcaagcc gagttcggcg gactgtccgg
    30481 caatgtcggc aatggtcagc ggcccggaaa tatggctgac ggaggcgttg ccgctgatta
    30541 gtttgccgaa aaatttgagg gttgtccacg agtgggaaac ggttttttcc cagcccatgc
    30601 cgaatgcgcg gataacagac ggacggtagc tgcggcggat ttgcgcgtcc cacgccctgt
    30661 ccggctgcgg acggaggccg acgcgcccga tcagggtgtg gtcgggctgt tcgacagtat
    30721 cggggcggat gtcggcggta tgggtttgtc cggcgcgttc gtaggtcagg gtgatttttt
    30781 tgccggggct ttggcgggtc aggtttgccc attcctgcca tgaggcgatg ggtttgccgt
    30841 cggcggcagt cagcctgtcg cccggtttca ggcctgcttt ttcggcgggg ctgccttttt
    30901 ccacgccgcc ggcaacggtt gtgattttaa agggcatcag tccgatgtag ccttggtttt
    30961 ttgcgatttt accggcttcc ggcgtgcctg cggcatcgat ggtgcggacg gtttgcgcgc
    31021 ccgatgccgt ctgaacgccg acggcgactt tgccggcttc gaggttgagg acgatttcgg
    31081 tttgcgcgct gccccaatct gcaacgggtg tgccgttgac ggattgtatt ttgtcgccgc
    31141 tttggaagcc ggcgcgggcg gcaatggtgt cgggttcgac tgtgccgaca taggggcgca
    31201 gttcggttac gccgaaggaa aagctcagtc cgtacagcaa aaccgccagt gcgagattgg
    31261 tcagcgggcc ggcggcgacg atggcgatgc gtttggcggg gtgttgtttg tcaaaagcgt
    31321 agggtaaatc ggcttctgat acttcgcctt cgcgcgtatc gaccattttg acgtaaccgc
    31381 ccaacggaat cggggcgagg caccattcgg tgtcgccgcg ctttcgggtg aaaaacggtt
    31441 tgccgaagcc gacggaaaag cgtacgactt tgacgccgca caatctggca acgatgtagt
    31501 gtccgaactc gtgcaggctg accaaaatca ggatggcgaa gataaaagct agaagggtgt
    31561 gcaaatggtt ttcctttgat aacggtgttc agacggcatc agcgcagtgt gccgataaat
    31621 gcccgcgctt gtgcgcgtgt ccgggcatct tgcgccaaga gcccccctat gtcgcctatg
    31681 ccgtctgaaa agtcttgtga aagacaatgg gcgacggttt tggcaatgtc ggtaaactta
    31741 atctgtccgt ccaaaaaggc ggcgacggcg gcttcgttgg cggcgttcaa tacgcagggc
    31801 gcggctccgc ctgcgttcat ggcttcatag gcgagcttca ggcaggggaa gcggtcaaag
    31861 tcgggctttt ggaaggtcag cgcggacaat gcgtcgaaat ccaggtcgcc gacacccgaa
    31921 tcgatgcgct cgggcaaacc caaacaataa gcaatgggcg tacgcatatc gggattgccc
    31981 agttgcgcca acacggagcc gtcgcggtag cgcaccatgc tgtgtatcac ggattgcgga
    32041 tggatgacga cttcgagctt gtcaggcgga cagttgaaca gccaatgcgc ttcaatcagc
    32101 tccaaacctt tgttcatcat ggtggcggaa tcgacggaga ttttgcgccc catgctccaa
    32161 ttggggtgtt tgaccgcttg ggcgggcgta atgctgtcga acgtgtttaa atcggcggtc
    32221 agaaacgggc cgccggaagc ggtcaggata atcgaagcga tgccgtgttc gttcagacgg
    32281 ccggcgtaat cgcgcggcaa aacttggaaa acggcgttgt gttcgctgtc gacgggcagc
    32341 actgccgcgc cgtttgcacg ggcggtttcc ataaacaacg cgccggaaac caccagcgtc
    32401 tctttgttcg ccagataaat ggttttgcct ttttgcgccg ctgcgagcgc ggaaggcagc
    32461 cccactgccc cgacgatggc gcacatgaca ccgctgactt cgtcggcaga cgcaacgtca
    32521 accaatgcct gcgcgccgtg taaaacctgc gtcgccgtgc cgtcgcgttt caacagggct
    32581 tcaagccggg cggcgtgttc cgcatcggca acgacggcat attcggggcg gaacgtttga
    32641 cattgagccg ccaatttctc gacctgctta tgccctgcca gcgcgaatac gcggaatttt
    32701 tcggggtggc gggagacaac gtccagcgtg ctttcgccta tgctgccggt actgcctaat
    32761 atggtcagga cttgtggtgt cataatgagg ataactttat accggatgcc gtctgaagcg
    32821 ttttcagacg gcatagaatc aatttaaaac cgacatcatc gccgcataga cgctgataac
    32881 ggcaatcagg ctgtcggtac ggtcgaacac gccgccgtgt ccggacagca ggttgctgct
    32941 gtctttaatg cccgccgcgc gcttgagcca gctttccaac aggtcgccgc atacgctgac
    33001 aacggtcagc accaaaccga ttaacacggt atcgaaccag cctgtatcga atgccagcca
    33061 gccggcactt cgtacggcgg tcatgtacac tgccacgcaa accgcgccgc cgattgcacc
    33121 ttcccagctt ttgccggggc tgattgccgg tgcgattttg tgtttgccga acgccttgcc
    33181 gctgaaatac gcgcaaatat cggcaaccca caccaaaccc atcacggcga gcagcggcag
    33241 ggcatcatcg ggatgcgggc gcagtgatac gagcgcgaac caaaacggca tgaccagaag
    33301 ccagccgacg gcataaacct gccaaccgcc gttgagcctc catttgaatc tcaaccataa
    33361 aggcataacg gcgagccaaa atgccaaaac aacataccaa accaaattag gcagcatcca
    33421 gccgcccgca taggcaacca cgccgaaaac caaggttgcg gcgaggtaat ggttggtttt
    33481 aattttgcac aaaccgccca tacgggcata ttcccacaag gcaatcaggg caatcagtcc
    33541 gcaaaatgca gcccacaacc attgcggcgc gtaaaacagc atgcccagca tcagcggcag
    33601 cagccacatg gcggttatta cccgttgttt cagcatattc agttcctttg ctgttcgata
    33661 ggcagttgct cggaggtgcg tccgaaccgc cgttcgcgtt tttggaacga agcgacggca
    33721 tcgtccaaag ccttgccgtc aaaatcgggc cacaaaatat cggtgaaata cagttctgca
    33781 tatgccatct gccagagcag gaaattgctg atgcgcgttt cgccgccggt gcggatgaac
    33841 aaatccggtt ccggtgcatc gcccagcatc aagtgtttcg ccagcgtgtc ttctgtaatc
    33901 tcggatacgc cttcggcaat cagtttgttt gccgcctgca aaatatccca gcggccgccg
    33961 taatcggcgg caatgctcag ggtcaggccg gtattgtttg ccgtcaacgc ctccgcttct
    34021 tcgatgcctt gcagaatctg ccggttgaag cgttcgcggc tgcccagtat tttcaggcgc
    34081 atattgtttt cgtgcagacg gcgtacctgt ttttgcaaag cctgtaaaaa cagccccatc
    34141 aggaacgaaa cttcgtcttc ggggcggcgc cagttttcgg ttgaaaaggc aaacacggtc
    34201 agatattgca cacccagttt ggcgcaatgc ttcaccatat tttccaatgc gtccaaaccg
    34261 cgtttgtgtc ccattatgcg cgggaggaaa cgttttttcg cccaacggcc gttgccgtcc
    34321 ataatcacgg cgatatgctt gggaatggcg gtgtgttcca aaacggcctg cgtgctgctt
    34381 ttcatgtctg cctttcgcgg ttcggcattc aaatgccgtc tgaacgccga accgtgcagg
    34441 ttaaattgcc atcaaatctt cttctttggc agtcaggagt ttgtcggctt cggtaatgta
    34501 tttgtcggtc agtttttgaa ccgcttcttc gccgcgacgt gcctcgtctt cggaaatttc
    34561 tttgtctttg aggagttttt tgatgtggtc gttggcatcg cggcgcacgt tgcggataga
    34621 gacgcggcct tcttccgctt cgccgcgtac gactttaatc aggtctttgc ggcgttcctc
    34681 ggtcagcatg ggcatcggca cgcggatcag gtcgccgaca gctgccgggt tcagccccaa
    34741 gtttgaatcg cggatggctt tctcgacttt ggccgccata ttgccctcaa acggtttcac
    34801 gccgatggtg cgcgcgtcca gaagcgttac gttggcaact tggctgacgg ggaccatgct
    34861 gccccagtat tcgacttcca cttggtcgag caggccggta tgcgcgcggc cggtacgcac
    34921 tttcgccaga ttttctttca gtacttcgac cgaacgctgc attttgcctt cggctgtttt
    34981 ttgaatatcg ttgatcatat tgttctttcg gtgggataag gtgggcggga gaccgtctga
    35041 acgcgtttca aacctttcag acggcatgaa aactgttaac tgcgaatagt accgttattc
    35101 gggcatgacg acaaggcagg cggattgggg atgccgtctg aagcggcagg cgtttcagac
    35161 ggcatcgtgt ccgaccgtca gccgtgttcc cgtgtttcaa gcaggctttg gcgcaggtgt
    35221 tggcgttcgt gggcatccag ccatttgcgg cgggtgcgtt gcagcaggat gacgagggcg
    35281 gaaatttcct gacgcatatt ggtgctgagc cagaggaagc cctgccattg gtagtggagg
    35341 tgttcggcga gggcttccag ttcggggttg atggcggtgt cgatgcggat gcggcgggcg
    35401 tgtctgccgt tgataagggc gacggtttgt tgcaggtcgg tttggagcag tgtgaagtgg
    35461 cggtcaagca gccggatttc gctgccgttg agtttgggag attgcagctt ggcggcagtg
    35521 gtcaggagca gctcggtggt gttgacaatt ttacggtggg cgtgctgcat ggcttccatc
    35581 atggcggggc tgatgcggct ttcgcccgat gtggcggcga ggtggctgcg gcttttgacc
    35641 atgcgtgcgt tgatttggcg cattttaacc atattctgct ccaaacgttc gcgcgtcata
    35701 cgcctgccgt tgctgatttc ggcaatcatt ttgctgcagt cggtcaggtt gtcggcaagc
    35761 atgaaacgcc acatcagtgt ggatttcagc ggcagcagtt tggcggcggc gatggcgatg
    35821 gccgcgccga tgaggacgtt catcgcgcgc atcaggccgc tgtcgaacca ttcgctgccg
    35881 ttgtcgccga tgagcatgca catcgtcagc cccgccagca tagggacgta gccgtttttg
    35941 ccgaccgccg cccagccggc cagtgcgctt gccgtgccga cggtgaggta gaagaggagg
    36001 ttgccgtgga aataatgctg gttcagccat aaaacgccca aacccgcgcc cagcccgatg
    36061 accgtgccga gcatacgttc caccgccttg gagtaaatcg ccccttgaaa ctggagcatg
    36121 ccgaggacga cgaagacggt catgcctatc cattcgccgt gttggaggtg gagcagccgg
    36181 gcgagtgcgg tggcgaacag gacggccccg ccgagccgca cggcgtgtat gaggcggcgg
    36241 tggcggtagc gttcgtagga gttgagccag cggctgacga ggcggttgcg ttgcgaggtg
    36301 ttcatatcgg ttgccgtctg aagcggaaat gtgaaaaagc acaggcttcc cgaggaaggg
    36361 agggtctgtg cttggtattg gtgccggaga agggaatcga acccccgacc ttcgcgttac
    36421 gaatgcgctg ctctaccgac tgagctacac cggcgttttt tcgttatgat atatatgaac
    36481 ggttgtttgt gcaacttttc tggcgggcgg caaggcagtg cgcggtataa tgcggtctgc
    36541 ttcggaagag ggggacggcg atgtttgtga acgagaaaga tccttatgcg gctctgtttg
    36601 cggggctggt gtttttgacg ttgccgtttg cgttggcggt gcatgatgcc tttgcgcttg
    36661 cgttcggacg ggcagggctg ctggtgtcgg tgtcggccgg cgtggcggtt gggacggtac
    36721 tgtttggttt gtgttcggtg tgtttgcgtt tttgaacctg gtcgtgtcgg caggcctgac
    36781 gaagctggcg tacaaaaaga tgatgcggcg gcattcccgt tacgcgctgt ttctgtcggg
    36841 cgtggcggct tgcgcggcgg cagcggtggc ttggattttc gagctgctgc ttggcagtgg
    36901 ggctttgggc gggctgcgtg gggaggcggt gttggaatat gcgtttgccg tgtggctggt
    36961 ggcgatgctg acgctgccca aacgcctgac gcgcgcgccg gtgcagccgg tggtgtttca
    37021 caggaaaaaa taggttggaa cgggaaatgc cgtctgaacc ccgacacgcg gtttcagacg
    37081 gcatgttttt ccgttaacat tacgcctgaa tatggacagg aagcagatat ggaacgcaaa
    37141 gaacgcctgc aatcaggcat tgccgcgatg gggctggata tttcggaaac ggcgcaggac
    37201 aggcttttgg cctatgtgga tttgttgaaa aagtggaaca aaacctacaa tctgaccgcc
    37261 ctgcgcgacg aggaaaaaat gattgtccat catcttttgg acagcctgac gctgctgccc
    37321 catatcgagg gtgtgcaaac gatgctggat gtcggttcgg gcggcggtca gcccggcatt
    37381 ccggcggcgg tgtgccgtcc ggatgtgcag ataacccttt tggatgcgaa tacgaagaaa
    37441 acggcttttt tacagcaggc ggttatcgag ttggggttgg acaatgtgcg cgtggtatcc
    37501 ggacgcgtgg aggcggtttc ggacgtgcgt gccgacgtgg ttaccagccg tgcgtttgca
    37561 gaactggcgg attttgtgtc gtggacggtg catctgttga aagacggcgg ctactgggcg
    37621 gcgatgaagg gcgtgtatcc gcagggggaa atcgaccacc tgccgcagga tgtgtgcgtc
    37681 gaaaaagtcc aaaggcttga cgtgccgggc ttggatgcgg aacgccatat cgtcatactc
    37741 cgcaagcgtt gagcgcgctt cagacggcat gaataccttt tttgtgcgga taaaggtaaa
    37801 attccgcact gtttttcttt tttcaacatc agacgggaca cgggcgggac atgagtgcga
    37861 acatccttgc catcgccaat cagaagggcg gtgtgggcaa aacgacgacg acggtaaatt
    37921 tggcggcttc gctggcatcg cgcggcaaac gcgtgctggt ggtcgatttg gatccgcagg
    37981 gcaatgcgac gacgggcagc ggcatcgaca aggcgagttt gcagtccggc gtttatcagg
    38041 tcttattggg cgatgcggac gtgcagtcgg cggcggtacg cagcaaagag ggcggatacg
    38101 ctgtgttggg tgcgaaccgc gcgctggccg gcgcggaaat cgagttggta caggaaatcg
    38161 cccgggaagt gcgtttgaaa aacgcgctca aggcagtggc ggaagattac gactttatcc
    38221 tgatcgactg cccgccttcg ctgacgctgt tgacgcttaa cgggctggtg gcagccggcg
    38281 gcgtgattgt gccgatgttg tgcgaatatt acgcgctgga agggatttcc gatttgattg
    38341 cgaccgtgcg caaaattcgt caggcggtca atcccgattt ggacatcacg ggcatcgtgc
    38401 gcacgatgta cgacagccgc agcaggctgg ttgccgaagt cagcgaacag ttgcgcagcc
    38461 atttcgggga tttgctgttt gaaaccgtca tcccgcgcaa tatccgcctt gcggaagcgc
    38521 cgagccacgg tatgccggtg atggcttatg atgcgcaggc aaagggtacc aaggcgtatc
    38581 ttgccttggc ggacgagctg gcggcgaggg tgtcggggaa ataggtcaat ccaaatcggg
    38641 ctgcccgtgc ctttatgctg tttggccggg tgcgttaata tggcggatta aaataaaaat
    38701 acttatatcg tc
//
LOCUS       DAWKOX010000002        35255 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.002, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000002 DAWKOX010000000
VERSION     DAWKOX010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35255
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.002"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(143..233)
                     /locus_tag="WJK78_000055"
     tRNA            complement(143..233)
                     /locus_tag="WJK78_000055"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(197..199),aa:Ser,seq:gga)
     gene            complement(272..358)
                     /locus_tag="WJK78_000056"
     tRNA            complement(272..358)
                     /locus_tag="WJK78_000056"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(322..324),aa:Leu,seq:cag)
     gene            complement(394..480)
                     /locus_tag="WJK78_000057"
     tRNA            complement(394..480)
                     /locus_tag="WJK78_000057"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(444..446),aa:Leu,seq:cag)
     gene            569..2944
                     /gene="rnr"
                     /locus_tag="WJK78_000058"
     CDS             569..2944
                     /gene="rnr"
                     /locus_tag="WJK78_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ7597043.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGIDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRQ
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAVKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIGHPFKTQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLATLREQL
                     GLLGLQLGGGDNPSPKDYAALVEQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAGGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3283..4746)
                     /gene="guaB"
                     /locus_tag="WJK78_000059"
     CDS             complement(3283..4746)
                     /gene="guaB"
                     /locus_tag="WJK78_000059"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ7597044.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4887..7445)
                     /gene="glnD"
                     /locus_tag="WJK78_000060"
     CDS             complement(4887..7445)
                     /gene="glnD"
                     /locus_tag="WJK78_000060"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ7597045.1"
                     /translation="MPANLSSALETFKQQRDAAEAHYLKANRVSVFFREYTAALETLL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTADKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTCAEAGMLSHGYRRLAHIRIHLHLNAKRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGISDARQFAADHF
                     LTEEESDLLAWLVENHLLMSIVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLAGNGGNPHALFGRRQQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAETSNHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEIFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQTLLEQLS"
     gene            complement(7494..7814)
                     /locus_tag="WJK78_000061"
     CDS             complement(7494..7814)
                     /locus_tag="WJK78_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7597046.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            complement(8138..8611)
                     /gene="bfr"
                     /locus_tag="WJK78_000062"
     CDS             complement(8138..8611)
                     /gene="bfr"
                     /locus_tag="WJK78_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ7597047.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(8639..9103)
                     /gene="bfr"
                     /locus_tag="WJK78_000063"
     CDS             complement(8639..9103)
                     /gene="bfr"
                     /locus_tag="WJK78_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ7597048.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVSRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(9567..10550)
                     /gene="lipA"
                     /locus_tag="WJK78_000064"
     CDS             complement(9567..10550)
                     /gene="lipA"
                     /locus_tag="WJK78_000064"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ7597049.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPRNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(10543..11166)
                     /gene="lipB"
                     /locus_tag="WJK78_000065"
     CDS             complement(10543..11166)
                     /gene="lipB"
                     /locus_tag="WJK78_000065"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ7597050.1"
                     /translation="MKVIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11168..11443)
                     /locus_tag="WJK78_000066"
     CDS             complement(11168..11443)
                     /locus_tag="WJK78_000066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ7597051.1"
                     /translation="MTEQKNKTSLIEFPCTFSLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQIKVENQEQLDNIYRALTSHELVKVVL"
     gene            11628..12698
                     /locus_tag="WJK78_000067"
     CDS             11628..12698
                     /locus_tag="WJK78_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ7597052.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLAFALGDTLAPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNTLKAWFPVLMRQGSNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(12895..13842)
                     /locus_tag="WJK78_000068"
     CDS             complement(12895..13842)
                     /locus_tag="WJK78_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ7597053.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(13857..14264)
                     /locus_tag="WJK78_000069"
     CDS             complement(13857..14264)
                     /locus_tag="WJK78_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ7597054.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIAKP"
     gene            14345..15004
                     /gene="ung"
                     /locus_tag="WJK78_000070"
     CDS             14345..15004
                     /gene="ung"
                     /locus_tag="WJK78_000070"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ7597055.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKRKLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            complement(15512..16027)
                     /locus_tag="WJK78_000071"
     CDS             complement(15512..16027)
                     /locus_tag="WJK78_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597056.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CLSTDLPPIGNYSSERYIPPQTSEPTPSPSNGGQAVKYKAPVKTVSKPAKSNTPPPQQ
                     APVNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(16493..18415)
                     /locus_tag="WJK78_000072"
     CDS             complement(16493..18415)
                     /locus_tag="WJK78_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7597057.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKFTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERVAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIIRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIAVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSLLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(18492..18887)
                     /locus_tag="WJK78_000073"
     CDS             complement(18492..18887)
                     /locus_tag="WJK78_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEZ7597058.1"
                     /translation="MMRRRGKKMLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVH
                     KDSVCLSQCRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGIS
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            19060..20367
                     /locus_tag="WJK78_000074"
     CDS             19060..20367
                     /locus_tag="WJK78_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ7597059.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREIRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGHDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            20360..20794
                     /locus_tag="WJK78_000075"
     CDS             20360..20794
                     /locus_tag="WJK78_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597060.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(20853..21122)
                     /locus_tag="WJK78_000076"
     CDS             complement(20853..21122)
                     /locus_tag="WJK78_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ7597061.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(21304..23766)
                     /gene="lon"
                     /locus_tag="WJK78_000077"
     CDS             complement(21304..23766)
                     /gene="lon"
                     /locus_tag="WJK78_000077"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ7597062.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDADHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DKKRLSETKKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEP
                     SGAEAAAESASKPKPRSRATKH"
     gene            24017..25120
                     /locus_tag="WJK78_000078"
     CDS             24017..25120
                     /locus_tag="WJK78_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7597063.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQAGLRVADVL
                     KTKPVHKKAADPNNPLAFARNRETTFLYRLKKA"
     gene            complement(25192..26937)
                     /gene="recD"
                     /locus_tag="WJK78_000079"
     CDS             complement(25192..26937)
                     /gene="recD"
                     /locus_tag="WJK78_000079"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ7597064.1"
                     /translation="MERQTDEFAQAAARAAIRFLEHYAGSGDEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     DTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPFDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCRHVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEEAFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(27005..27700)
                     /gene="lolD"
                     /locus_tag="WJK78_000080"
     CDS             complement(27005..27700)
                     /gene="lolD"
                     /locus_tag="WJK78_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ7597065.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVLVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNHHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSREEAAEAAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(27693..28940)
                     /locus_tag="WJK78_000081"
     CDS             complement(27693..28940)
                     /locus_tag="WJK78_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ7597066.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPGGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSRRASKTQPAEALRYE"
     gene            29145..29423
                     /locus_tag="WJK78_000082"
     CDS             29145..29423
                     /locus_tag="WJK78_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597067.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAV
                     TAVGMGVKEPISLNGGSDSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(29479..30096)
                     /gene="recR"
                     /locus_tag="WJK78_000083"
     CDS             complement(29479..30096)
                     /gene="recR"
                     /locus_tag="WJK78_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ7597068.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(30163..31701)
                     /locus_tag="WJK78_000084"
     CDS             complement(30163..31701)
                     /locus_tag="WJK78_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ7597069.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQADGGGPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKVKPANGKPAYVRLTGLP
                     APVIVEVQAVTPPDDAAARIPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(31761..32135)
                     /locus_tag="WJK78_000085"
     CDS             complement(31761..32135)
                     /locus_tag="WJK78_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ7597070.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQVPSEAEICS
                     WLEQVPLATLLNKRGTSWRKFDAETQQKALFSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFNRQAPCRQG"
     gene            32225..33913
                     /locus_tag="WJK78_000086"
     CDS             32225..33913
                     /locus_tag="WJK78_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ7597071.1"
                     /translation="MLQSENSKNLISCSIKALPIMISTNGITMQFGAKPLFENVSVKF
                     GEGNRYGLIGANGSGKSTFMKILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVL
                     DVVMMGHTEMWAAMTERDAIYANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLS
                     GVGISEDLHNAKMAEVAPGFKLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVL
                     NQYDSTMIIISHDRHFLNEVCTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNA
                     KAKEKLQELQEFVARFSANKSKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEAD
                     EKAKLHRQAVEVEKLAKRFETQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAY
                     NPEYSDVLLPDEGTIKWAEKASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIR
                     GTLGRLLFGSNDVVKKVKVLSGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESL
                     NMALEKYNGTLIFVSHDRQFVSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            33985..35238
                     /locus_tag="WJK78_000087"
     CDS             33985..35238
                     /locus_tag="WJK78_000087"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ7597072.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVEKLRSKTIIDVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
BASE COUNT         7754 a         9101 c         9652 g         8748 t
ORIGIN      
        1 taccgcaaaa cataccataa aaaaacggta acggatagtt gtaagcggtt gatgacgatt
       61 atagacaata acgggttttc ccaatgaaat tattgtttga ataataaaaa atcccaaacc
      121 gtaaaagttt gggatttgta tttggcagag aggaagggat tcgaaccctc gatacgctat
      181 tcacgtatac acgctttcca ggcgtgcgac ttaaaccact catccacctc tctaatggcg
      241 gaaattatcc caatcgggat aatttattat ttggtgcccg ggagaagact cgaacttcca
      301 cacccatgag gataccagca cctgaagctg gcgcgtctac caattccgcc acccgggcaa
      361 tctaaatatt gaaataaagc aaagcatttg atttggtgcc cgggagaaga ctcgaacttc
      421 cacacccgtg aggatactag cacctgaagc tagcgcgtct accaattccg ccacccgggc
      481 tttgctttat ttgctgtttt gcggtacagt gtcctgccgc aaagaagtcg ctattatata
      541 gttcataaag agaatgtcaa cagtccaaat gaataaaaat attaaatctt taaatttacg
      601 ggaaaaagac ccgtttttaa gtcgtgaaaa acagcgttat gaacatcctt tgcccagtcg
      661 ggaatggata atcgaattgt tggagcgcaa aggtgtgcct tcaaaaatcg aatcgcttgc
      721 gcgcgagctg tcgattacgg aagacgagta tgtctttttc gaacgccgtc tgaaggcgat
      781 ggcgcgggac ggtcaggttt taatcaaccg tcggggcgcg gtttgcgcgg cggacaaatt
      841 ggatttggtc aaatgccgcg tcgaggcgca taaggacggt ttcggttttg ccgtgccgct
      901 cacgcccgcc aaagacggtg attttgtttt gtatgaacgc cagatgcgcg gcattatgca
      961 cggcgatatt gtcactgttc gtcctgccgg catcgaccgt aggggccgcc gcgaagggac
     1021 agttctggat attgtcgaac gcgcgcaaag caaagtggtc ggccgtttct atatggatag
     1081 gggcgtggcg attttggagc cggaagacaa gcgtctgaac caaagcatcg tattggaacc
     1141 ggacggcgtg gcgcgtttca aacctgaatc cggtcaggtc atcgtcggcg aaattgaggt
     1201 ttatcctgag caaaaccggc aggcagtggc aaaaatcatc gaagttttgg gcgattatgc
     1261 cgacagcggc atggagattg aaattgccgt gcgcaagcat catttgccgc accaattcag
     1321 tgaagcgtgt gccaaagccg tgaaaaaaat tcccgaccat gtacgcaaaa gcgatttgaa
     1381 aggccgcgtc gatttgcgcg acctgccttt ggtaacgatt gacggcgaaa cggcgcgcga
     1441 ttttgacgat gcggtgtttg ccgaaaaaat cggacgcaat taccgtctgg tcgtggcgat
     1501 tgccgatgtc agccattatg tccgccccga tgacgctatc gacacggacg ctcaggaacg
     1561 cagcaccagt gtttacttcc cgcgccgcgt gattcccatg ttgccggaaa acctgtccaa
     1621 cggcatctgc tcgctcaatc ctaatgtcga gcgtttgtgt atggtgtgcg atatggtcat
     1681 cacttacgcg ggcaatatta aagaataccg cttctacccc gccgtgatgc gctctcatgc
     1741 ccgcctgacc tacaaccaag tttggaaatg gctttcaggc ggcatcgggc atccgttcaa
     1801 aacacaaatc gacacgcttt acaaactctt caaaatcctt cagaaaaagc gtttcgaacg
     1861 cggggcggtg gagtttgaca gcatcgaaac ccaaatgctt ttcgacgaca acggtaaaat
     1921 tgaaaaaatc gtccccgttg tccgcaacga tgcccacaag ctgattgaag aatgtatgct
     1981 ggcggcgaat gtttgcgcgg cggattttct gttgaaaaac aagcatacgg ctttgttccg
     2041 caaccatttg ggccccacgc ccgaaaaact cgccaccctg cgcgagcagc tcggtctgtt
     2101 ggggcttcaa cttggcggcg gcgacaaccc gtcgccgaaa gactatgccg cgcttgtcga
     2161 acaattcaaa ggcagacctg atgccgaatt gctgcaagtc atgatgttgc gctccatgca
     2221 acaggcggtt tacgaaccgc attgcgacgg acactttggt cttgcctacg aagcatacgc
     2281 ccacttcacc tcgcccatcc gccgctatcc cgacctgacc gtacaccgcg ccatcaaagc
     2341 cgtgttgaat cagcaaacct acacgccaaa aaaaagctgg caggctttgg gcgtgcatac
     2401 ctcgttctgt gagcgccgtg ccgacgacgc cagccgcgac gtggaaaact ggctgaaaac
     2461 ctattatatg cgcgataagg tcggcgaagt attcgaaggt aaaatctccg gcatgaccag
     2521 ttttggtatc tttgtaacac tggacggcat ccacattgac ggcttggtgc atatcagcga
     2581 tttgggcgaa gactatttca acttccgccc cgaaatcatg gcaatcgaag gcgaacgcag
     2641 cggcatccgt ttcaacatgg gggacagggt tgccgtccgg gtcgcccgtg ccgatttgga
     2701 tgacggaaaa atcgattttg tcctgattgc cggggggagc ggcagggggc ggaaagttaa
     2761 atcatccgcg tctgccaaac cggcagggac ggcggggaaa gggaagccga aaaccgccgc
     2821 cgagaaaaaa acagcccgag gcggcaaagt aaggggaagg ggcgcgtctg ccgccgcaga
     2881 atcggggaaa aaggcaaaga aaccggttcc gattaaggta aaaaaacgga aaggcaaatc
     2941 ataatgctga cggggtggct tggggagggc ggggcatact ttcccgaagc cgccgcccga
     3001 ttttttgata tggcggccgg cgcatcattt caggccaatc gaaacgcccg tattgaaaga
     3061 ttgcgtttat ttccaccgcc gttttaaagg ccggcggtat tcggcagacg gggcgcaaac
     3121 ggcgttcaga cggcattttc attctttcgg cgtgtccgtc cgaattgctt tgcccgtccg
     3181 cgcaatcagc ccgtgcggct tgccttgaac ggacaaaaaa tgccgtctga aacccgaaaa
     3241 tcaggtttca gacggcattt tgccttgaaa aggctgttca aatcagcggt ggtagttcgg
     3301 tgcttcttta gtgatttgaa cgtcgtgaac gtgcgattcg ctcatacctg cggaagtgat
     3361 ttccacaaat tcggcttttt cgtgcatttc ggcaatattg gcgcaaccca agtaacccat
     3421 actggaacgc agaccgccgg tcagctggtg gatgatgttc acaatcgggc ctttgtaagg
     3481 aacgcggcct tcgatgcctt cggggacgta tttgtcggtg ctgtcggttt tgtcttggaa
     3541 gtagcggtcg gcagaacctt ggctcatcgc gcccaatgaa cccataccgc gataggattt
     3601 gtacgagcgg ccttgataga gttcgatttc gcccggcgct tcttccgtgc cggcaaacat
     3661 accgccgagc atgacgctgt acgcgcctgc ggcgagggct ttggcgatgt cgccggagaa
     3721 gcggatgccg ccgtcggcaa tcaggggaac gcctgtgcct ttgagggctt cggcaacgtt
     3781 gtggatggcg gtcagttgcg gcacgcccac gcctgccacg atacgggtgg tgcaaatcga
     3841 tcccgggccg ataccgactt tgacggcatc cgcaccggcg gcgaccaaat ccaaagcggc
     3901 tttggcagtg gcgatattgc cgccgatgac ttggatgtgc ggataggttt ctttcaccca
     3961 tttcacgcgg tcaatcacgc cttggctgtg cccgtgggca gtatcgacga caatcacgtc
     4021 cacgccggct tcgaccaagg ctttgacgcg ctcttcggta tcgccgccgg tgccgactgc
     4081 cgcaccgacg cgcagacggc cttcggagtc tttgttggcg ttgggaaact cggtggtttt
     4141 taaaatatct ttaacggtaa tcagaccttt gagttcgtct ttttcgttca gaaccaaaac
     4201 gcgctcgact ttgtgcgtgt gcatcagttc gcgcgcttcg tctatgcttg tgccttcggg
     4261 gacggtaacc agacgttcgc gcggggtcat aatggcggaa acgggcaaat cgacgcggtt
     4321 ttcaaaacgc aggtcgcggt tggttacgat gccgacgact ttgccgtttt caacgacggg
     4381 caggccggac attttgcgtt tgcgctgcgc acgcatttcc aagacttcgc ggatgagcgt
     4441 cgtcggtgca acggttacgg ggtctttgac cacgccgctt tcgtggcgtt tcactttgga
     4501 aacggcgcgc gcctgcattt cgggcggcat gtttttatgg atgatgccga tgccgccttc
     4561 ctgtgccatc gaaatggcga ggcgcgcctc ggtaacagtg tccatcgcag cggaaagcag
     4621 ggggaggttg agtgtgattt cgcgggtgag cttggtttga agtttaacgt ctcgcggcag
     4681 cacggtcgaa tgtgcgggaa ccaacaaaac atcgtcgaaa gtataggctt tttctacgat
     4741 acgcataatg ctcggtcttt cagtttgtgc aagatgcacg gcattatagc acgttaccgg
     4801 cggcttgaca gtttatattg tttgcaatat cccccgcctt caggcggcat acggcgtggc
     4861 ggcggaatgc cgtctgaagg cgggcgttat gataattgtt ccagcagcgt ctgcttcaat
     4921 gaggactgga tttttgggtt tttcaggtcg gggctaaaaa cggtaaaact gtcttcggcg
     4981 cgttcatcca gtgtggagat tttggcatag cgcaggctga cgttgtgggc gaaaaagatt
     5041 tccgccatat cggcgagcag gaaggggcgg ttgacggcgg taatttcgac ggagtaccag
     5101 tcggggtagt cttcttcggg ggtaatggtg atgcttggcg cgatcggcat gtagcggctg
     5161 cggcggctga tgcggcggct gtggtttgag gtttcggcaa cggtgtgtcc gtggataaag
     5221 ctgttgagtt cggcttcaag cgcgctttga atgtcggggt agtcttcggg ggcgtgttgt
     5281 gagggaattt gcacgatgaa ggtgtcgagg atgtagtcgt gttcggtgat aaaggcgcgg
     5341 gcggcgagga tatcgaagcc gtggcggctg aaaatgcggc agagacgggc aaacaggcgc
     5401 gggccgttgg gcatgaaaac catgacttga aagctgtcgc ttttgggcag gatgcggctg
     5461 cggacgatgg gggtttcaaa gtcgtggact aggttggcgg cgtgccacag gatttcgcgg
     5521 gactggtggc gggcgaagta ggcggaaccg agcgcgttcc aaagcttttt ctgctgtttt
     5581 tcggggacgg cggcgcgggt gagcaagtcg gcggcttctt gttggcggcg gccgaagagg
     5641 gcgtgcgggt tgccaccgtt gcctgcgagg tagcgtccgg cggcatggaa gaggctttcc
     5701 agcaggctgg cgcgccatgc gttccacagc ttgggattgg taccgcgtat gtcggaaatg
     5761 gtcagaaggt agagcgcgct gaggcgttcg tgggtttgga cgcgtttgca gaaggcatcg
     5821 agtacgtcgg ggtcttggat gtcttctttt tgggcgacga tggacataag aagatggttt
     5881 tcgaccagcc aggcaagcag gtcgctttct tcttcggtca ggaagtggtc ggcggcaaat
     5941 tggcgcgcgt ctgagatgcc ttgtatggca tggtcgccgc cgcgtccttt ggcgatgtca
     6001 tggaaaaagg cggcaaggta gaggatgtct tgtttttcaa aggactgcat cagtgcagag
     6061 gcgtagggca gctcgtggct gtgcatatcc aaggcaaggc ggcggacgtt gcggacgacg
     6121 gcgaggatgt ggtcgtccac gggatagatg tggaacaggt cgtgctggag caggccgacg
     6181 attttttccc acgcgggcag gtagcgtccc aatacgccgt agaggttgag gaagcgcagg
     6241 gtttgggtca gtccgttgcc gttgcggaaa aagccggcga agcggtggcg gttttcagaa
     6301 ttttggtaga agctgcggtt gattttgcgc gtcgcgcccc accatgcgcg cagggtttgc
     6361 ggttcgagcg cggtaatgtc gttgcgctgc tgcatgattt cgacgatttt gaaaatgtgt
     6421 tcgggccgtc tgaaaaaaat atcggtgtgc cgcgcggcga tttggttgtt gacttggatg
     6481 tagtcgtcgt caatccgcag ggtaacgcgc aacggggtgg aggaaacgcg gctttgcagc
     6541 ataggcgtga ggatgccgcc cagttgtttg acggttttaa tcgcgcggta aaacacgcgc
     6601 atcagttctt cgctttggcg gcggaggttc aagccttcat aacccatgct ttcggcgact
     6661 tgcggctgca aatcgaacag caggcggtct tcggcgcgct tggcgtttaa atgcagatgg
     6721 atgcggatgt gggcgaggcg gcggtagccg tgcgaaagca taccggcttc ggcacacgtc
     6781 aaaatccgct gtttgagcag gtcgggcagg tcggtcgcca agccttgcgc cttcgctatc
     6841 caaagcaggg tgtggatatc gcgcagaccg cccggacagc ttttgatatt cggctccaat
     6901 actgcccccg aaccttgcga tttggcgtgg cggtgttcca tctccaccag ttttgcctcg
     6961 acaaacgccg ccacattgcg ctgcgcgttc attttttccg ctagtttatc cgccgtttgg
     7021 cggttgccaa acaaaaacct agcctctaaa aacgctgtgt cccccgtaat atcattgcgc
     7081 acgctttcac atagttcatc aacgctgccg ctttttacag acggcatcag tttgcagtcc
     7141 cacagggttt ggacaaaccg ggcaatctgt tcctgaatgc cgtctgaaag cggggcaggg
     7201 gagacaaccg ccaaatccac atccgaacag ggatacagtt cgccgcgtcc gaagccgcct
     7261 accgccatca ggcataacgc gctgttttga aaatactctg cccacaatgc cgccagtaag
     7321 gtttcgagtg ccgccgtata ttccctgaaa aataccgaca cgcggttggc tttcaaataa
     7381 tgcgcttcgg cggcatcgcg ctgctgtttg aaggtttcca gtgctgaaga caggtttgca
     7441 ggcattttta ttctttcgat tggcgggaaa aagggaggcg gatggttcgg cggtcaaata
     7501 ccgctttcag acggcatttg tcgggtatcg gcggaattgg tcatcagctt caaccgttcc
     7561 tgcggcggca gcagcaactg atacgccgcc acgcccaaag ccgccgccat tttttcgata
     7621 ttcgacaggg cgatgttcca gcgtttgcgc tcgactgccg acacataagt cctgtccaaa
     7681 ccgcattgcc gcgccaattc ttcttgcgac caacccttgt tcacgcggaa aagccgcata
     7741 ttgtatgcca ataccgcccg caaatcctgt tcgtcaggca gttcggcagg cagagtcaat
     7801 ttgttgccca tcatttgctt ccagataaat ggttaaagtt aagcatttgc tgttacggat
     7861 tttacttcac ataaaagcca aaaaaaaggg gtggcggcag ccacacccaa acacacacac
     7921 atcaagagga aagagataaa atcagacaga ttggaaaaca gcaaacaagc accctgaatt
     7981 tcatatcggt attatcaaac aaaaaccctt atcaggtatt gattcaaatc aatttagatt
     8041 ttattcgcaa accgaaaaag aaaaacggca tatccgttta tacggatatg ccgtctgatg
     8101 gtgcggggga ctgctgtatt tggcagtagt ttgtgtttta gtcctcttgc gccgctgttt
     8161 gcaggtagtt gggcagaccg attttgccga taagctcttg ctgggtctcc agccagtcta
     8221 tatgttcttc gttggtgtct ttttgttttt ccaacaaatc gcggctgacg taatcctgtt
     8281 gcgcttctgc tgtggcgatg gcggcaagca gggcttcgtg tttttcctgt tctttggtca
     8341 aatcgcaggc gatgatttct tcggtggact cgccaatcag aagcttgccc agttcttgca
     8401 ggttcggcag accttcgagg aacagaatgc gctcgatcaa atcgtcggca gctttcattt
     8461 caacgatgga ctgtttgaag aaatgttcgc ccagttcttc aaagccccag tttttcaaaa
     8521 tacgggcgtg aaggaaatat tggttgatgg ttaccagcag caagcctaag tttttgttca
     8581 gctcgcggat aaccaaacgg tcgcctttca tacggactcc ttttattccg aatacggatt
     8641 acagttggct ttggtagtag ttgccttcgc caatcagctc gatcaggcgc agctgctgtt
     8701 ccagccagtg ggcgtggtct tcttcggtat ctttcagttg ggcgaccatc aaatcgcggc
     8761 tgacatagtc ttgcgcctct tcgcacagtt tgatgccttt tttcaaagcg tcgcgcactt
     8821 cgtattcggt ttgcaggtcg gctttgaggc aggaaaccac gtccgtgccg atattcagct
     8881 cggcgcgcgc cattttcggc gtaccgccca gcatcaggat gcgtcggatg aagtcttcgg
     8941 cgtgtgtggt ttcttcttcc atctcgtgat tgagacgttc aaaaagtttg gtgtagcccc
     9001 attcggagta gaggcgggag tggataaagt attggtcgcg tgccgccagc tcgccagaca
     9061 gcaattcgtt catataatca acaacagctt gattgccttg cataatatct ctctttccgt
     9121 aacttggttt tcggtatgtc tgaacagcat ctgtgtcgct attcgggatg cgtgcattgt
     9181 atgcaaaagc tgtcggcatg acaaattttc tatttaaaat acaaacaatt atcaaaagaa
     9241 atagggcgta ttccccgatg ccttccaaat cagtatgctg tttcttatcg gttttttgtg
     9301 ctgttaaaac taagaatcca tatcatccat aaagaacatt tacacttgtt aaccatagcg
     9361 aaaagcaaat actgtacggt tttttatcaa aatttataat gaatcgttct cattaaccga
     9421 cagattcttt tgagattatc ggattttggg aataaattat gccgtctgag gggctttcag
     9481 acggcataga caattaaagc tgattaaaca acgcggcaga cagcagcgta ggaaattatt
     9541 ttttacttcg gaacggtatt ttgggtttaa tgatgcccgc aaccgccgtg gctttcgcgt
     9601 aaggcttcgg cagcctgttc gtcggcgtgg tagctggaac gtaccatcgc gccgatggcg
     9661 gcattgctga agcccagttc gtatgcttct ttttcaaaga ttttgaactg ctcgggcgta
     9721 acgtagcgca ggacgggcag gtgtccgtct gaaggctgga ggtactgtcc gatggtaatc
     9781 atttcgatat tgtgcgcccg catatcgcgc ataatttcac gcacgtcttc gtctgtttcg
     9841 cccaagccga ccatgatgcc ggatttggtc gggatatgcg gcatcatttc tttataacgt
     9901 tttaataagt ctaaagaatg ttgataatta gcaccgggac gggcttttct gtacaggctc
     9961 ggatgggttt ctaggttgtg gttcatcacg tcgggcgggg tttcggcaag gattttgagt
    10021 gcgatgtcca agcgtcctcg gaagtcgggg acgaggattt cgattttggt gttcgggctg
    10081 gtttcgcgga tggctttgat gcagtcggcg aaatgctgtg cgccgccgtc gcgcaggtcg
    10141 tcgcggtcga cggaggtgat gacgacgtaa cgcaggttca tggctttgac ggattcggcg
    10201 aggtttctcg gttcgtcggg gtcgagcata ttgggccgac cgtgtcccac gtcgcagaac
    10261 gggcagcggc gggtgcagat gtcgcccata atcatgaagg tcgccgtgcc tttgctgaag
    10321 cattcgccga tgttggggca ggaggcttcc tcgcaaacgg tgtgcatctt ttgttcgcgc
    10381 aaaatgtctt tgatttcaaa gaatttgcgc gatgggagtt tggcgcgtat ccattcgggc
    10441 tttttcagtt tttcctgaag ggggacgact ttgatgggga tgcgcgcggt tttgtccgcg
    10501 cctctgagtt tgatgccgcg tttggggtcg tcggttttga tttcactcat tgttgtctgc
    10561 tttcggtgtg aattgtgttt caaggtgtgc ggtaagtttg gcggcgactt cgtccggcgt
    10621 ggggcagggt tggacaaaat ccgcgatttg cgtcatttcc ataccggcgt agccgcaggg
    10681 gttgatgtgg gtaaacgggc ttaaatccat attgacgttg agcgcaagcc cgtgatagac
    10741 ggagccgttt ttgatacgca gccccagtga ggcgattttg cgttctccga cataaacgcc
    10801 ggggcgtttg gggtctgccg ccgcttcgat gccgtattct gccaatgtgg cgatgatgct
    10861 gttttcaagc gcggaaacga tgtttctaac actggttttg cgccgtttga aatcaatcat
    10921 cgtataaacg accaattgcc cgggcccgtg ataggtaatc tgcccgcccc ggtcgatttg
    10981 gacgacggga atgtcgtcgc gaatcagcag gtgttcgggt tttcccgcca gtccttgtgt
    11041 gaacacgggc gggtgttcga cgacccacag ttcgtcttcg gtgtcggcat tccgtccggc
    11101 attaaaggtt ttcatcgctt caaaagtcgg cagatattcg accaaacctt tgtgtatgac
    11161 tttcatctca aagtaccact ttgaccagtt cgtgcgaagt cagcgcgcgg tagatgttgt
    11221 ccaattgttc ttggttttca acctttatct gaacggtggc gccggtatag ttgcctttgc
    11281 tgctcggacg cgtggtgatg tggtgcgcct gcgtgtcggg ggcgtggagg cggacggtgt
    11341 ctaaaaccgc ctgctcgaac tcgggatgca ccgcgcccat tacttttaat gagaaggtgc
    11401 agggaaattc gatgagggat gttttgtttt tttgttcggt catgatgtgc tgccttatcg
    11461 tgtacggtat gccgtctgaa ggcgggtttg cctttcagac ggcatcggat gtgcgttatt
    11521 ttagcctaaa ccgcgataac aggctatcgg gaaggcggag gcttttttga cggcgcggcg
    11581 gttctgctat actggcgcgc aatattattt ttagaagggt ggtttttatg tatcggagga
    11641 aagggcgggg catcaagccg tggatgggtg ccggtgcggc gtttgccgcc ttggtttggc
    11701 tggctttcgc acttggcgac acactggctc cgtttgcggt tgcggcagtg ttggcgtatg
    11761 tgttggatcc tttggtcgaa tggttgcaga aaaagggttt gaaccgtgca tccgcttcga
    11821 tgtctgtgat ggtgttttcc ttgattttgt tgttggcatt attgttgatt attgtcccta
    11881 tgctggtcgg gcagttcaac aatttggcat cgcgcctgcc ccaattaatc ggttttatgc
    11941 agaacacgct gctgccgtgg ttgaaaaata caatcggcgg atatgtggaa atcgatcagg
    12001 catctattat tgcgtggctt caggcgcata cgggtgagct gagcaacacg cttaaggcgt
    12061 ggtttcccgt tttgatgagg cagggcagca atattgtcag cagtattggc aacctgctgc
    12121 tgcttccctt gctgctttac tatttcctgc tggattggca gcggtggtcg tgcggcattg
    12181 ccaaactggt tccgaggcgt tttgccggtg cttatacgcg cattacaggc aatttgaacg
    12241 aggtattggg cgaatttttg cgcgggcagc ttctggtgat gctgattatg ggtttggttt
    12301 acggcttggg gttggtgctg gtcgggctgg attcggggtt tgcaatcggt atggttgccg
    12361 gtattttggt ttttgttccc tatttgggcg cgtttacagg actgctgctg gcaaccgtcg
    12421 ccgccttgct ccagttcggt tcgtggaacg gcatcctatc ggtttgggcg gtttttgccg
    12481 taggacagtt tctcgaaagt tttttcatta cgccgaaaat cgtgggagac cgtatcgggc
    12541 tgtcgccgtt ttgggttatc ttttccctga tggcgttcgg acagctgatg ggtttcgtcg
    12601 gaatgttggc aggattgcct ttggccgccg taaccttggt cttgcttcgc gagggcgtgc
    12661 agaaatattt tgccggcagt ttttaccggg gcaggtaggc ggttccgaaa catatagtgg
    12721 attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacaaatagg gcaacgccgt
    12781 actggttttt gttaatccac tatatttgaa gcggaataca accttgcccg ggtttaaata
    12841 aaaatgccgt ctgaaccccg aaaactggac ttcagacggc attttcatca cggcttattt
    12901 ggcggttttg ctgctgtcga taattttcat accggcagaa atcaggctgc cgatgtcggc
    12961 aacattggcg ggcataatca gcgtattgct ttctttggca agattgttga acgcggcgac
    13021 gtattgttcc gcaatcttca ggttgaccgc atccgcaccg ccttgggttt gaagggcggc
    13081 ggcaatttga cggatggctt cggcattggc ttcggcaaca aggcgcaagg attccgcttc
    13141 acctttggcg cggttgatgc gggcgatttt ctcggcattt gacgcattga ccgcagcctg
    13201 agcctcgcct tcggattgtt ggatttcggc ttcgcgctga ccgctggcaa ggttgatttg
    13261 ttcgatttta cggccttcgg attcggcgat acgggcgcgt ttttcgcgtt cggcggtaat
    13321 ttgcgcctgc attgagcgaa ggatttcttg aggcggcacc aagtctttaa tctcataacg
    13381 caaaaccttc acaccccaag ccccggccgc ctcgtccaaa gccgcaacaa cagtactgtt
    13441 gatttcgtcg cgttcttcaa acgttttgtc caactccata cgcccgataa cggaacgcag
    13501 cgtcgtttgg gcaagctggg taattgccat gatgtagttg ctcgaaccgt atgaggcgag
    13561 tttggggtcg gttacttgga aatagatgat gccgtcaaca gtcagctgcg tattgtcgcg
    13621 cgtgatgcag acctggctgg gtacgtctaa agggatttct ttcagcgaat ggcggtaggc
    13681 aacgcggtcg ataaagggaa tcaaaatatt caaaccggcc gtcagggcgc gatggaaacg
    13741 cccgagcctt tcgacaacgt ggacttcctg ttgtgggatg acaacaaagg atttgaaacc
    13801 gaaaacggca acggctgcca acaagataat gaaaaattcc ataattcctc cgagtgttaa
    13861 ggttttgcga tgataagaag gttgccttcc ttgcggacga ttagggcgcg cgttcctggt
    13921 tcaagctctt cttgccccgt attttgcgcc tgccagtgcg taccgcgata aaaaacttcg
    13981 taacggttgc cgcctgtgtg tcggaggatt tcgacatatt gtccggcatc caaatcctga
    14041 tatgaatccg tttcaacttt tctaacggcg gttttggcgt gtacgaacca aatacccagc
    14101 gcggaaagca gagcggcggt caagacggcg gcaggcgtgc tgccggtcag cccgtaagca
    14161 atgcccgaac ccgccaaagc cgcgctgaca accaaaagat aaaccgttcc cgtcaataat
    14221 tcgatgatta agacggcaac agcggcaaca aaccatacag tcatacattt ccccacaaag
    14281 cgcgtcgttt gacaaaataa cgcaatatca gcagtatagc cgaatttgaa aggatagggc
    14341 agatatggac acttggcacg atgcactcgg cggcgaaaaa cagcagccgt attttcagga
    14401 aattttaaat gcagtcaggc aggaacgttt gtcgggacaa atcatctatc cgccggcggc
    14461 ggatgtgttc aacgcattcc gcctgacagc gttcgaccgg gtcaaagccg tcattctcgg
    14521 acaagatccg tatcacgggg cagggcaggc gcacggtttg gcattttccg tccggcaggg
    14581 tatccgcata ccgccgtctt tactcaatat ctacaaagaa ttggaaaccg acatcgaagg
    14641 cttttccata cccgcgcacg gctgcctgac agcgtgggcg gagcagggcg tattacttct
    14701 gaacacggtt ttgacggtgc gtgcaggaca ggcgcattcg cacgcccttt taggctggga
    14761 acgctttacc gataccgtca tcaggcagct tgcgacacac cgcaagcatc ttgtctttat
    14821 gctgtggggt gggtatgcac aacaaaaaag gaaactgata gacagtcaaa accatttgat
    14881 attgaccgca ccgcatccgt ctcctctgtc ggcatatcgc ggttttttcg gctgccgcca
    14941 tttttcacag gcaaacagct atttgagccg gcacggtatc gatccgataa actggaagct
    15001 gtgaatgcca tctgaatgcc aagttgctta aaccccactg aaggctgctt ttgaaaccgg
    15061 aaacaaagtg attaaggaaa accggcccat aatgcaaaac cgtctgaatc ctagggttca
    15121 gacggcattt tttgccgcca tttccaaaaa caacttttgt tcgcctgccg acaaatccga
    15181 caaagtcgtt tggttgaggg ctttggcaat aatttaacat aatatacatt atgcgaacta
    15241 tcggaaacag ttgtacgtgt ccctgtggtc tttccaagta ggaaaattaa agtatggaca
    15301 atgcggctga atgtatagcc cggagcatcc gcgtatccga aggtactgaa cgatatgccc
    15361 tgcatccctt tcgatgcttc catccagccg gtattgggaa atacgttgac cttcaatata
    15421 atatacaggc agccgacaca caggatatgc cgctgctttt tcatcatttc ttctgtcaaa
    15481 tccttggaac ggtcgatttg aaaacacggc tttacatacg tcccaattct ctttgcagtg
    15541 cttggatatt ttgctgcctg tccaatacat tgctttgtaa tgcatttatt tcttgatggt
    15601 tgatgttgcc gccctttgcc agacgtgctt gtgataacat tttttgggct tcagtcaggg
    15661 ctttgcgttc gttgctcaat tctgcttcga gaatggagcg tctgctgttg tttacaggtg
    15721 cttgttgagg cgggggcgta ttggattttg ccggcttgga tactgttttg accggggctt
    15781 tatatttgac agcctgtccg ccgtttgacg gtgatggtgt cggttcggat gtttggggcg
    15841 ggatatagcg ttcgctgctg tagttgccga ttgggggcaa atcggttgag aggcagcttt
    15901 tggacggctt ggtggtgtaa acggtttctc cgttgattgt gcaggtgtag attttggccg
    15961 cattcgcacc caatgggctt gaaatcaggg aaaagttgat taggattaag gggagttttg
    16021 atttcataat gtgcttgatg ctcggataat tatttgattt tttggtattt tttgtaatgc
    16081 tttcttggcg ttttacgggc ttttcttttc ggttgtttgc ttttgatttt ctttcggggc
    16141 tttggcagcc tgcttgttct ttttcccggc aggttttttg tttttctttt tactttctat
    16201 gtgtattttg gcttcttaac tgagtttttt aattttcagg cggtatccgc ctccctgatg
    16261 gctgctgatt ttaggtaaat ccgcatcggc gcacgatcct gctggggccg atgtatatac
    16321 gcttttgcca tttgagttgc aatggtatac ggaggcttgc gccgccgcgc cggaaaggga
    16381 caggagaccc aaggcggcaa aaagtctgat gtttataccg gtaaaaggcg gtgataacgc
    16441 ccgaattata ccgttattgg caggcaaaga taagcaccct gtccgcgctt ctttatcgct
    16501 cggcaaactg tttctcgatt tcagtttcaa tccgttccaa ttcttcttga caagccagcc
    16561 aaacctcttc gatttgggca agttgtgttt tgacttttgc cagcagggat aaggtatttt
    16621 gcaatttttc tttgtttgct tcaaggtaag cgtcttcttg tgctaaaaat gcttcacatg
    16681 ccgtctgaat ttcggaaagc tgcgccattt ctttttcggc acggtctatt ttctgctgta
    16741 tcggcttgcc gcgtcgggct ttttcctgac ggatttgcgc ttcgatgcgc ttggtgtctt
    16801 tgcggctttg gctttgtgcg gatgctgcgg gtgcggcggc ggcgttttcc tgtgccaaac
    16861 gccattggcg gtaatcgttc aaatcgccgt cgaagttctt cagacggcct ttgtcgatca
    16921 ggaggaagct gtcggtagtc gcttcaagca ggctgcggtc gtgcgatacg gcgattaatg
    16981 cgccttggaa actttgcaac gcgagcgtta aggcgtggcg catatccaag tccaaatggt
    17041 tggtcggttc gtcaagcagc aacaggttcg gcttttgcca gataatcatg gcaagggcaa
    17101 ggcgggcttt ttctccgccg gaaaaaggtt cggttttctg taacgccata tcgccaacaa
    17161 aattgaagcc gccgaggaaa tttcggattt cttgttcgcg tacttcggga gaaagctgct
    17221 gaatatgcca aacagggttt tggtcggcgc ggatggtgtc gagttggtgt tgggcaaaat
    17281 agccgatatt gagtttttcg gaacggatga tgctgccgga aagcaaatcg attttgcctg
    17341 ccaaggcttt gataaaggtg gatttgccgc tgccgttgac acccaatagc ccgtagcgtg
    17401 cgccgctttc cagcgacagg gtaatgtcgt gtaggacagt tttgccttcg taacccaaat
    17461 cagcgtgttc tagctttaac aaaggattgg gcagatggtc gggatggtaa aactcaaagg
    17521 aaaactcgct gtccagatgc gcgggcgcaa cgcgttctag ctttgccaaa gccttcatgc
    17581 ggctttgcgc ttgaacggct ttggtggctt tggctttgaa gcggtcgata aaggattgca
    17641 aatgtttgat ttgcgcctgc tgtttgacat aggcagcttg ttgttgcgcg agacgctgcg
    17701 cgcgttcgtt ttggtaaaaa tcgtaattgc cgccgtattg cgtgaatttt tgctgcgata
    17761 attcaatggt ttgggtagtt gccgcgttga gaaaatcgcg gtcgtgggaa atgatgattt
    17821 gcgtgcaggg taaagaagca agatggtttt ccagccacaa gacggtttcc aaatccaagt
    17881 ggttggtcgg ttcgtccaaa agcagcaaat cggcgcggca aatcagggct tgggcgagat
    17941 tgaggcgcat acgccagccg ccggaaaagg atttgacggg gcggctgtgt tcttcttgcg
    18001 aaaaacccag cccgttcaac aattttgccg cgcgggccgg cgcggtataa gcgtcgattt
    18061 cttccaattt ggcatgatat tccgcctgct tcatgccgtc attttgcgct tctgcctgcc
    18121 tcaatgccgt ctgaaaagcc tgcaactcgg catcgccctg caaaacgtaa tccaaagcgg
    18181 aaatatccaa atcgggcgtt tcttgggaaa cggaagcgag ccgccagttt ttcggaatcg
    18241 agacatcgcc gccgtcctga gtgatttcac ccttgattaa ggcaaacagg ctcgatttgc
    18301 ccgttccgtt tttgccgatc aaaccgacgc gctgaccggg attgacggta gcgttggctt
    18361 tgtcgagcag gactttcaaa ccgcgttgca gggtgaggtt tttgatttca atcataacgg
    18421 aaacatcgtc gggcgggaaa agcccgtatt ttacctgaaa gtcagtgccg atgccgtctg
    18481 aaacgggaaa tttacggctg aagccaagcc caagccctgc gcccttccga gtgcaggaaa
    18541 accaatgtcc tgaatgccga atcggtattc atgcattcca cgctgattcc gattcgggaa
    18601 aaatccgcca tgattttggg atggataaac tcctgagccg cgcccgtccc gataatcaat
    18661 atttccggat agtcaacagg tttgatgtcg gacaacaggt tttccggagt cagatcggac
    18721 aaggttcggc attgcgacag gcagaccgaa tccttatgta caagcacggg tttatggaaa
    18781 ctttgccccg ccagccggat tccgcccgca ccgcattcat attccgcaaa ctgtccgtct
    18841 atcggatttt cttcaaacaa cattttttta ccccgtcgcc gcatcatcta caccgaaagg
    18901 ggtgcaaaat cagacaaatt catgtaggat tggcagattt catctgactc gcctgccgat
    18961 ttcagacggc atttgattca aagtgcggca ccattatatc ggcagcggat attttcgtct
    19021 ttcaatattt acatttcagt cggcttacaa ggagacacaa tgaagccagt aaacatcggt
    19081 cttttaggtt tgggtacggt cggcggcggt acggctgccg tgttgcggga caacgcggag
    19141 gaaatttccc gtcgcttggg gcgcgaaatc cgtatttctg ccgtatgcga cttgagcgaa
    19201 gaaaaagccc gccaaatctg cccgtccgca gcctttgtca aagatccgtt cgaactggtc
    19261 gcgcgtaaag acgtcgatgt cgtcgtcgaa ttgttcggcg gcacgggcat tgccaaagat
    19321 gcggtgttga aagccattga aaacggcaaa cacatcgtta ccgccaacaa aaaactgctc
    19381 gccgaatacg gcaacgaaat cttcccgctg gcggaagaaa aaaatgtcat ggtgcaattt
    19441 gaagcggcag tagcgggcgg tatcccaatc atcaaagccc tgcgcgaagg tttggcggca
    19501 aacaggatta aatccatcgc cggcattatt aacggcacca gcaacttcat cctctccgaa
    19561 atgcgtgaaa aaggcagcgc gtttgccgat gtactgaaag aagcgcaggc actgggctat
    19621 gccgaagccg acccgacctt cgacatcgaa ggacatgacg cgggccataa aatcaccatc
    19681 atgagcgcgc tggcattcgg cacgccgatg aacttttccg cctgctacct cgaaggcatc
    19741 agcaaactcg acagccgcga catcaaatac gccgaagaac ttggctaccg catcaaactg
    19801 ttgggcatca cccgcaaaac cggcaaaggc atcgagctgc gcgtccaccc taccctgatt
    19861 cccgaaagcc gcctcttggc aaacgtcaac ggcgtgatga acgccgtgcg cgtcaacgcc
    19921 gatatggttg gcgaaacctt atattacggc gcgggcgcgg gcgcattgcc gaccgcttcc
    19981 gccgtggttg ccgatatcat cgacatcgcc cgcctggttg aagccgatac cgcccaccgc
    20041 gtaccgcatc tggcgttcca acccgcgcaa gtccaagcgc aaaccatcct gcctatggac
    20101 gaaattacca gcagctacta cctgcgcgtc caagccaaag acgaaccggg cacgctgggg
    20161 caaatcgccg cgctgttggc acaagaaaac gtgtccatcg aagcactgat tcaaaaaggc
    20221 gtgattgatc agaccactgc cgaaatcgtg attctgaccc acagcacggt cgaaaaacac
    20281 atcaagtcgg caatcgcagc catcgaagca ctggattgcg tggaaaaacc gattaccatg
    20341 atccgcatgg aaagcctgca tgactgagcc gaaacacgaa atgccgacgg aagagcaggt
    20401 tgccgcgcgc aaaaaagcaa aagccaaaat ccgcaccatc cgcatttggg catgggtcat
    20461 tttggcgttg ctcgcttcaa ccgccctgct ctcccaatgc gcgatgtcca aaccgcaggc
    20521 aaaacagaaa attgtcgagt cttgcgtgaa gaatattccg tttgccgaaa aatggcaaaa
    20581 cgatttacgg gcccgcggtt tagattcaaa caatacccgc cttaccgtcg actactgcaa
    20641 atgtatgtgg gagcagcctt tggacagatt gagcgagaaa cagattagat ccttcggcaa
    20701 actcggcgca caagaacagc ttgacctgct cggcggcgca aatgcctttg aagcacgtga
    20761 caagcagtgt gttgccgatt tgaaatcaga ataatgtgga ccgataaaaa agccgattct
    20821 ttaaagaatc ggcttttttc ataaaaaacg gcttacagtg cgtctttcaa agctttgccg
    20881 gcgcggaatt taggcgtttt ggcggcggca atggtcagag gctcgccggt tttggggttg
    20941 cggccttggc gttccgcacg ttcgcccacg tagaaagtac cgaaaccgac caaagtaacg
    21001 gtgtcgcctt gtttcagggc ggtggttact gcattggtag tggcatccaa agctttttgt
    21061 gcggcggctt tggaaatgtc ggcttcttga gcaatcgctt cgatcaattc agacttgttc
    21121 acaatcagtc ccttcctgtc ttaaaaaatg atgaaatgcc cgaatactcg gggtttgtac
    21181 tgcttgagca actttcgctt tatagcaatt ctgaaattgc cgtgtcaagc aaaaaatacg
    21241 gaatcaccct atttgacagg ctttcaggac gaaaccgcat ttttacaaca catttcctgc
    21301 gtttcaatgt ttggttgccc tgctgcgggg ttttggtttt gaagcggatt ccgccgccgc
    21361 ttccgcacca gaaggttctg cccaaggctc aggctggctt tccaaaccca gagccaatac
    21421 ctcgtctatc catttgaccg gatggatggt caggccggtt ttcacgtttt cagggatttc
    21481 ttccaagtct ttgaggttgt cttttggaat taaaacgtgt ttgatgccgc cgcgaagcgc
    21541 agccaacagt ttttccttca gaccgccaat cggcaggact tcgccgcgca gggtaatttc
    21601 gcccgtcatg gcaacatcgg cgcgcaccgg gattttggtg aatgcagaca ccatcgccaa
    21661 agtcatggca atgcccgcac tcggaccgtc tttcggcgtc gcaccttcgg gaacatggac
    21721 atggatgtct tttttctcgt aaaaatcagg agccaagccc actgattccg cgcgggagcg
    21781 gacaaccgac cacgctgcag acacggattc cttcatcaca tcgcccaact ggccggtgca
    21841 ctgaatcacg cccttacccg gcaatgctgc ggcttcgacg gtcagcagtt cgccgccgac
    21901 ttctgtccac gccagaccgg ttacttgtcc gatacggttt tcgctttcgg caacgccgta
    21961 atcgaagcgg cgcacaccca aatagtcgtg cagatttttc tcatttactt taaccgcttt
    22021 aggtttggct ttgctggttt tcttggtttc agacaacctc ttcttatctt cgtccaaggt
    22081 aatctgcatc accaccttgc ggcagatttt ggcaatctcg cggtcgagcg aacgcacgcc
    22141 cgcctcgcgg gtgtagtaac ggataatatc gcgcaccgcg ctttcttcga ttgccaattc
    22201 cccttctttc acgccgttgc gcttcatttg cttcggcacg aggtactgca tcgcgatatt
    22261 gattttttcg tcttcggtgt agccggacag acggatgatt tccatacggt cgagcagcgg
    22321 ggtcgggata ttcaggctgt ttgaagtcgc aataaacatc acatcgctca aatcgtaatc
    22381 cacttcggca taatgatcgg cgaacttgtt gttttgctcg ggatcaagca cttcgagcaa
    22441 cgcgctggcg ggatcgcccc ggaagtcgct acccaatttg tcgatttcgt cgagcaggaa
    22501 caatgggttt tttacgccgg cttttgccat attctgcaga atcttaccag gcatagagcc
    22561 gatataggtg cggcggtgtc cccggatttc gctttcgtcg cgcacgccgc ccaaagccat
    22621 gcggacatat ttccgccccg ttgctttggc gatggattcg cccaaagagg ttttgcccac
    22681 gcccggagga ccgaccaggc acagaatcgg gcctttgagt ttgtccatac gtttttggac
    22741 ggcgaggtat tccaaaatcc gttctttgac tttttccagg ccgtagtggt cggcatccag
    22801 caccagtccg gctttggcga tgtctttgct gacgcgggat tttttcttcc acggcagttc
    22861 gagcagggtg tcgatgtagt tgcgtacgac ggtggattcg gcagacatcg gcggcatcat
    22921 tttgagtttt ttcagttcgg acaggcattt ttcttccgct tctttgctca tccccgcctt
    22981 tttgatgcct gcttccaagg catccagttc gccgttttcg tcttcttcgc ccaattcttt
    23041 gtgtatcgct ttaatctgtt cgttcagata atattcgcgc tgggattttt ccatttggcg
    23101 tttgacgcgt ccgcgtatgc gtttttcggc ctgcataatg tcgagttcgg attccagctg
    23161 tgccagcagg aattccatcc gtttgccgat ttcgggaatt tccaaaatct gttggcgttg
    23221 cgccagtttc aactgcaaat gcgctgcgac cgtatcggtt agccggctgt tttcggcaat
    23281 gccgttgatg ctgccgataa tttcggcggg gattttttta ttgagtttgg cgtattgttc
    23341 aaactgcgcc aacagggtgc ggcgcacggc ttcgaggtcg gtattgccgc ccgtgtcttc
    23401 ttccacgacc gcctctatat gggaaacgaa cagaccgccc gtgtcttcga tggtcagaac
    23461 acgtccgcga tacagacctt cgaccaatac ttttaccgtg ccgtccggca gtttcaatac
    23521 ctgtaagact tgtgcgacgg taccggtctg atacaggtcg gcggcaaccg gttcttctag
    23581 cgccgcatcg gtttgtgcca ataggaaaac cggttcctcg cgggtaatgg cgttttccag
    23641 tgcggcgatg gatttcggcc tgccgacaaa cagcggcaga accatatgcg ggtaaacgac
    23701 gacatcccgc aaaggaaggg ttgccaaggc ggcatattcc tcaaaatgct tttctttttg
    23761 tgtcataggt actctcttgt gtctgacaga ttgccgattt tcgcgtacat tggggttgaa
    23821 ggtattattt caagcatatg tggtttattt atggagtttg atgcgatgcc gtctgaaaca
    23881 ttccggcttc agactgcatg ggcttggaaa gacaaggcgg gaacaaaaaa ctgttctgtg
    23941 ttgccgctcc ttgctgtacc atccgtatgg tttacggttc tgccgcccta ttttcaaaac
    24001 atgacgcagg tatcccatgt cttcttttat ttttcccgat aacggggccg aatggcgcaa
    24061 cgaaagtgtg caaaagccgc ccaaaggttg gcattatgtc cgcgaaagcg gtgcagacgg
    24121 cattttgaag gctgcctatc aaaatattgc aactgtctgg cagggcgatt tccacaatgc
    24181 caaacaggtg ctttctgcaa tgaagaagag ggctcgcaaa cctgccgccg tccgttccga
    24241 tgcggatatc gccgcccttt tccatgccca ccgtatgaag caggcgcagc agagccgtat
    24301 tctgaatatg cttgccgttg aaatccgccc cggttttgtg ttggacaaca aacgcgcgcc
    24361 cgatatacgc gccgccctgc tcgacgtgta cggagaggcg gacggcaaac cgtttttcct
    24421 gccgctcaat ctgctgctgg ggtttatggg tgcgcacgag tggcataaga aaggggttgc
    24481 cgttccgcag ctgggcggca gcatacacgt tcctttcggc gtattctcgc cgttgcgcgg
    24541 cgaatacctc gacctgctcg cccatgcgcc gtcaacgggt tttcagacgg cattcgatat
    24601 cgggacgggc tcgggcgtgc ttgccgccat tttggcgaaa cagggcattc cttccgtcat
    24661 cggcacggat accaatccga aagccgtcgc ctgcgcccgt gccaatattg cccgtttggg
    24721 ctttgaaaaa caggttgaga tacgggaaac cgatctgttt cccgaagggt ttgccgatct
    24781 gattgtctgc aatccaccct ggcttcccgc caagccgact tccgccgtcg aatccgcgtt
    24841 atacgacccc gaatctgcga tgctggctgc gtttttgcgg gatgcgccga aacatctgaa
    24901 tcccgacgga gaaatccgcc tgatcatttc cgatcttgcc gaacatctgc acctgcgtcc
    24961 gtccgatttt ctggataagg catttgctca ggcgggtttg cgcgttgcgg atgttttgaa
    25021 aaccaaaccg gttcacaaaa aagctgccga tccgaacaat ccgctggctt ttgcccgaaa
    25081 cagggaaact actttcctgt accgtttgaa aaaggcataa ggggcggcgg tgcgcttccg
    25141 gcggcaggca tcggaacgcc cgcgccgccg gcacggcatc attcgggcgg attattcttg
    25201 tgaaaatacc cgctcgagca tactgcccaa tgccgtctga cgcgttttga cggtggcggc
    25261 agcttgccgg aaggcttctt ccccgccgaa gaatacgaac ttctctctcg cgcgggtaat
    25321 ggcggtatat aacagctcct tactcaatcc ggacaatgca tcgtcccctt cgtccgaagg
    25381 tgcggcggaa ggcggcagca gccatacttc ccggtattcc gaaccttggc ttttgtggac
    25441 ggtcatggcg aatgcgggtt caaattcggg caggcagctt accgctacct ttttaaatcc
    25501 gtccgcatcg gcaaaatagg cggcaaggct gccctgccgt ccgacatctt ccataatcag
    25561 tccgatgtcg ccgttgaaca gttcaagcgc gtagtcgttc tgcctgatca taatcggctc
    25621 tccggcaaaa tatgccaaat gttccggtat gttcattttg cggcgtacat ggcggcaata
    25681 ggcttcgttg aagtcttccg catcctgccg ccaagctgcc agaaccacga tatccgaaat
    25741 gcccgcgtat gcggcttcga tattgccgtc ttttaccgcc tgccaatagg ctttgtgtgc
    25801 ccggtacaac ctttcgactc gagcgttcgg actgcattcc gaatgttcca gttcgtccgg
    25861 aaaccggtca aacaatgccc acgccccttc atcgcccgat acggcggcac gggcaaggca
    25921 gccgatgccg ctgttgtcgc cgaagcggtg gctgaacgac agatgggcgg tgttttgcgc
    25981 caacacgggt ggatttgcgc tgacgctgaa accgtgttcc ggaaggaagc cggccagcct
    26041 ttggtgcgtt tctccgtcca aaacggtttt ttgtgacaaa acggacagca ccgcccctat
    26101 tccgacggac gggagctggt tttcatcccc cagcagaatc acgcgcgcgc cggttttgac
    26161 cgcttttaaa agttgcagca tcaatgccgt atccagcata gaggcttcat cgataaccaa
    26221 tacgtcaaac ggcagcgggt aaacagggtt gaacgccgcc tgcattttgg gcgggcgcag
    26281 cttcagcagt cggtggacgg tctgcccttc cagtttgagc aaatggcggc ggacggcctc
    26341 cggcgcgtca aaaccgttga ttgcacggtg cagcgcgcgc gccatatgtg ccgccgcttt
    26401 gcccgtcggt gcggcaagcg cgatgttggg aagattttcg tcttcaccgc aaatcagcgc
    26461 cagcagtttg gcaaccgttg tcgttttgcc cgttcccggc ccgccggtaa tcaccataaa
    26521 agactgcaac agtgccaagg cggcggcatc gcgctgccct tcgctgcccg tgccttgaaa
    26581 ccattttgcg aggttttgcc tcgcgcctgc cgcgtcgggg gcggacgtgt cggctgccgc
    26641 caagcgtttt atctcggcag ccaaatcgta ttccaactgc cacatcctgc ccaaaaacag
    26701 ccttctgcct tccaaaatca aaggcgcggc ggatgttccg acaacgggtg cgagtgccga
    26761 cagcgcgtca gcctcgccac cgctcaaacg gataaacgaa tgaccgtttt gcaatgcctg
    26821 aaacaggcgt tcggtgcagt ttgcaagcac ttcgtcgccg gaacccgcat agtgttccaa
    26881 aaaacggatt gccgcccttg ccgccgcttg ggcaaattca tctgtctgcc gttccatttt
    26941 attccttatc caaatgccgt ctgaaggcgt ggggcttcag acggcgcggt gttgtttcgg
    27001 ctgtttaggc gtttgcgccc tgtttggggt gcaggctgcc gtctttcatg accatcacgc
    27061 gctcgaagcg gccggcgagt tcgtcgtcgt gcgttacgac caccagcccc gttcccaatt
    27121 ctgttttcag ttccagcatc atatccaaaa cattcctggc gttcgcacga tcgagattgc
    27181 cggtcggttc gtcggcaagc aggcatttgg gttgggtaac caaggcgcgt gcaatggcgg
    27241 cacgctgccg ctcaccgcct gaaagttcgc ccgcgcggtg cgtcgaacgg tgtttcagtc
    27301 cgaccttttc cagcatcgcc attgccgcct ccgcagcctc ttcacggctt tttttgccga
    27361 tcagaagcgg catcattacg ttttccagtg ccgaaaattc aggcagaaga tggtggaact
    27421 ggtacacgaa accgagatgg tggttgcgca ggatgcccag ttgtcgctgg cttaatgtac
    27481 gtaaatcctc gcccatcagc agcaccctgc cttcagacgg catatccagc ccgcccaaaa
    27541 tatgcagcag cgtcgatttg ccgctgcccg aagaaccgat gatgccggtg ctttcccccg
    27601 cgcggatttc caaatccaag ccgtgcagca ccagaacgtc caaaccgccg tcccgatagc
    27661 gtttgcccac gccttcgcat ttcaaaatca actcactcat aacgcaaagc ctccgccggt
    27721 tgggtttttg acgcgcgccg gctcgggtag agcgtcgcca cgaaagacag ccccaaggaa
    27781 atgcaggcaa tcagggcaac gtcgcccata tcgacatcgc tgggcaggta gtcgataaaa
    27841 taaacctgcg aattgatgag gtggacaccg agcaggtttt caaaaaacgc cacgaccctg
    27901 ccgacgttcc aacccaaaag cacgccgcag accacacccg ccaacgtgcc gaaaaagcct
    27961 gaaaacgcgc cctgcaccat aaaaatcttc atcacgccgc caggggaaag acccaaagtc
    28021 cgcaaaatcg caatgtccgc ctgcttttcc gtaaccgcca tcaccaagga agagacaagg
    28081 ttgaacgccg ccacggcgat aatcagcgtc aggatgatga acatcatccg tttttccaac
    28141 tcgaccgcct caaaatagct tcgattgctg aacgtccaat cgcgcaccca aaccgtatcc
    28201 ctttgcgcct ccggaatcag tgttgccgtc aaggcggggg cgttttgcgg gtcggcgagt
    28261 ttcagccgca gccccgcaac ttccttatcc aagcggtaca gtacgcgcgc gtcttggata
    28321 tgcgtcatcg ccaatgagtt gtccacttcg taaacgcccg tcttaaccag accgaccacg
    28381 gtaaactgct tcaggcgcgg cacgactccg gcaggggtaa cgttgccctc cggcgtgatg
    28441 acggtaactt tattgccgac ttccgccccc aaagcctccg ccaagccgac accgaggata
    28501 atgtcaaact cgcccggaat caggtcttca aatttgcctg ccggcatttt gtcgccgtat
    28561 tccaccactt tgcgctcttc agacggcaaa atgccgcgca tctgcacgcc cctgatttcg
    28621 cccgcattgg ccagcaatgc ctgattggaa acatagggcg cggcagccaa aatacctttg
    28681 cggttttcgg taaaccgaag caggttgcgc caatccgtat ccgtattgtc gatatagccg
    28741 atttcggcgt gcggcgcgac attcaggagc tgcccgcgta tttctttctg aaagccgttc
    28801 ataaccgaca agacgacaat cagcgcggtt acgcccaagg cgattccggc aatcgaaacc
    28861 atcgtgataa acgacataaa gccgttgcgc tttttcgccc tgagatacct caagcctatc
    28921 caagcctcta gagaaaacat aacgctacct taaaaatgtc tgcaaacgtg ccgccccgga
    28981 cggcggtttg ggggcggcgg caaaagttta ttgtaccgta aaaccccggc agcgtccgaa
    29041 cgcccgagtg cgggggacgg ggcggcagag cgggcggaaa acttgcacaa cgcgtcaaac
    29101 tgccctatcc tttccttcag aaaaaccgtt tcttgaggaa aacaatgaat atccgaactg
    29161 cttttgcttt gtgcgccatc gccttatccg ccgctgcggc tgcctacgcc aaagaaatca
    29221 aaatcgatgc caacaacacg ccttattccg aagccgacgc gcaaaagctg gcggtaacgg
    29281 cagtcggtat gggtgttaag gaacctatca gcctgaacgg cggcagcgac agcattaccg
    29341 tgtccggcag cagcgcgacg cagtgcgtgt tcaaagtcgg caacggaggc gcattgcaga
    29401 ttcaagggct aaactgcaag taaaccgccc ggaaaaatgc cgtctgaagg cttcagacgg
    29461 cattttgcat tggcggcgtt atgccccgcc ttctttaatc aggcggcgtt cgtacaccgc
    29521 ctgcgccagc gttcccgcat cgacatattc caattcgccg cccaagggaa tgccctgcga
    29581 cagcctgctg actttgtaag gcaggttttt aaaaaactcg gacaggacat acgccgtcgc
    29641 attgccttct gcggtaaaag cggttgcaat aatgatttct tcgacttccc cgccgcccag
    29701 ccgttgcgcc agcctgtcca atgcgatggc ggatacgtcc attcccaatg ccgtattgat
    29761 ttgccccatc aggacgaaat acagcccgtc gtggcagttt gccgcttcca tattcgacac
    29821 gtcggcaggc atatgcacca ccatcagccg ccgcccgtcg cgtgtttcat cggcacaaat
    29881 atcgcacaat ccgccttcgc aaaacgtgtt gcacatcgcg caatggtaaa cctgcttcaa
    29941 tgccgtctgc aaggcatcca ccagtttttc agcctctttg cgcttgtgtt ggagcaaatg
    30001 atacgctatc cgctgtgccg atttcggccc gacgttgggt aaaaccttca gcgcgtcgat
    30061 caatccttgg aaggcatctt gttttttgtg gctcatcata ttccgccgta tgggaaaacg
    30121 gccggaatat tccgaccgtt atgttgtcaa caaaagtgtc aattactgac cgtcgccgtt
    30181 gtcgaccgat tgcgctcctt tggtctgttt gattttgccg ttgaaataac gtatcaacaa
    30241 gtcgaaggta ttggcagact gctgctgcgc caaagcctgt tttgcaagcg ggatgcgcgc
    30301 ggcggcatca tccggcgggg ttacagcctg tacttcgaca atcacgggtg ccggcaggcc
    30361 ggtcagcctg acataggcgg gtttgccgtt tgccggtttt actttcagca gttccgcata
    30421 agcctcgggc ggcatggact gccttgcctg ctgtgcgccc aaaacggaca cttccgacca
    30481 tttcacgtca actgccttgc cgccgttcag ttgggtaagc acgtcttttg ccttgttttc
    30541 ggcaagtttg gcggcttcgg tacggatata agcctgacgt accgcgtctt tggcttcggc
    30601 aaacggcagg gttttctctt cgcggacttc tttggcgcgg acgacccacg cggtttcgct
    30661 gttgatggtc agcacttcgg aattgtgttt tttcttcaat acgtcgtcgc tgaatacggc
    30721 attgatcagg ttttcgggca taccggacat ttgcgcatcc tgcctgctca gccaagtttc
    30781 ttgggtttcg actttcaaac cgctgttttt ggcggcttcg gcaagcgagg aaggatggtt
    30841 gaacgcgtca tcgcccagct tttcttttgc cttattgaag tcggcaaccg cctttttcat
    30901 tttcaattcg ttttctacgg cggctttttc ctgctcgaaa gaaggtttgg cttcatttgc
    30961 cggcaaacgc gccacgcgct cttcaaacgc atttttcact tctgtttcgc tgacggtctg
    31021 tttgtctgca aagtctttca gattcaaggc gacatattcc aatttgaccg ctttgggaag
    31081 caggtagtct tttttgtttg cgttataaaa cttctgcaaa tcggcttcag acactttgac
    31141 ttgggcgatg aattcgtcgg ggttgaaagt gtgcgaacgg atggtgcggt tgacctgcgt
    31201 cagcctgatc agctgttccg cctgcgcgtc gccgaccaat acgccgtttt ggacgaggtt
    31261 taccaaattc tgcaaggcaa actgatcgcg gatttcttcg acaaactggt cttcagacat
    31321 atggcgttgc gacaggtagc ggtttaaaag cgcgtggtcg aatttgccgt ttgcgtcgtg
    31381 gaaattggga tcatccacga taatctgctt gatttgttcg gaagaaaccg aaatgcccat
    31441 cagcttcgcg ccctgtttca ggtaggcgcg ttgcagcagg gattggaaca ccgcgtcgcg
    31501 cgaagggccg ccgccgtccg cctgttcgtt ctgtatggcg ttgttgatgg agtggtcgct
    31561 gattttttcg tcgcccactt ggacgatgta gtcggcaccc ggatgggata ccgtgctgac
    31621 cccgaagccg acgaaggtta atgcaatcag gcccaaaagg acttgggcgg gcgttctgta
    31681 tttttcgatg gaatggaaca tattttaaat cgggatatag aatgggaacg ggaaattcaa
    31741 gtcgggtatt gtaacggttt ttatccctgt ctgcacgggg cttgccggtt gaagatgccg
    31801 tcgtaggttt cttcgctgaa gccggcgtaa accttgccgc cgcactccaa tacgggacgc
    31861 ttgatcaggc tcggcatttc ggacatcagt ttgacggcct ccgctgtcga gaacagggct
    31921 ttttgctgtg tttcggcatc gaatttgcgc cagcttgtcc cgcgtttgtt gagcagggtt
    31981 gccaaaggca cttgttccag ccacgagcag atttccgctt cggaaggcac ctgtttttta
    32041 aaatcccgaa attcaaactc caagccgtat ccggcaagcc ggtttttggc ttttttgacc
    32101 gtatcgcaat ttgggatgcc gtgaaggact atcatttgga aaccttttgt ctgaaataat
    32161 aaaacggata ttttactata agtgtctgaa aatttgcccg tctgtttcag acggcagggc
    32221 ggttatgtta caatccgaaa attcgaaaaa tttaatctct tgttcaataa aggctttacc
    32281 aatcatgatt tctaccaacg gcatcaccat gcagttcggc gcgaagccgc tgtttgaaaa
    32341 cgtatccgtt aaattcggcg aaggcaaccg ctacggtttg atcggcgcga acggctcagg
    32401 caaatccacc ttcatgaaaa tcctcggcgg cgatttggaa cagacggccg gcgaagtggc
    32461 gattgaaaac ggcgtgcgtt tgggtaaatt gcgccaagac cagtttgcct acgaagacat
    32521 gcgcgtgctg gacgtggtga tgatggggca taccgaaatg tgggcggcga tgaccgaacg
    32581 tgatgcgatt tacgccaatc ccgaagccac cgaagacgac tacatgaaag ccgccgaact
    32641 ggaagccaag ttcgccgaat acgacggcta caccgccgaa gcgcgtgccg ccgaactgtt
    32701 gagcggcgtg ggcatttccg aagatttgca caatgcgaaa atggcggaag tcgccccggg
    32761 cttcaaactg cgcgtattgc tggcgcaggc gctgttctcc aagccggatg tattgctctt
    32821 ggacgaaccg accaataact tggacattaa taccatccgc tggttggaag gcgtgttgaa
    32881 ccaatacgac tccacgatga ttatcatcag ccacgaccgc cactttttga acgaagtctg
    32941 cactcacatg gcggatttgg actacaacac catcaccatc tatccgggca actacgacga
    33001 ctacatgctc gcctccgccc aatcgcgcga acgcgccctg aaagacaatg ccaaagccaa
    33061 agagaaactg caagagctgc aagagttcgt cgcccgcttc tctgccaaca aatccaaagc
    33121 ccgtcaggca accagccgtc tgaaacaggc cgacaaaatc aaatcggaga tggtcgaagt
    33181 caaaccttcc acccgtcaaa acccgtatat ccgttttgaa gccgatgaaa aagccaagct
    33241 gcaccgtcag gctgtggaag ttgaaaaact ggcgaaacgc tttgaaaccc agttgtttaa
    33301 aaacctgaac ttcatccttg aagcgggaca acgcctcgcc atcatcggcc cgaacggcgc
    33361 gggcaaatcc accctgctga aactcttggc cggcgcgtac aaccccgaat attcagacgt
    33421 cctgttaccg gacgaaggca ccatcaaatg ggcggaaaaa gccagtgtcg gctactatcc
    33481 gcaagaccat gaaaacgact tcgacgtcga tatggacctg agcgaatgga tgcgccaatg
    33541 ggggcaggaa ggcgacgacg aacaagtcat ccgcggcact ttggggcgtt tgctcttcgg
    33601 cagtaacgat gtcgtgaaaa aagtgaaggt tctctccggt ggtgaaaaag gccgtatgct
    33661 ttacggcaaa ctgttgctgt tgaaacccaa tgtcttagtc atggacgaac cgaccaacca
    33721 tatggacatg gaaagcatcg aatccttgaa catggcactg gaaaaataca acggcacgct
    33781 gatttttgtc tcccacgacc gtcagttcgt ttcctccttg gcaacccaaa tcatcgaact
    33841 ggacggcaaa ggcggatatg aacactactt gggcgattac gaaagttact tggagaaaaa
    33901 aggcgtagca taaccgccgg ttggaacaat gccgtctgaa gccgcttcag acggcattgt
    33961 tgataacttt aaaataggaa gcatatgcag acttacctcg tcggcggcgc cgtccgcgat
    34021 tatcttttgg gcttgcccgt caaagaccgc gattgggtgg tcgtcggcgc agacgcacaa
    34081 accatgctgg cgcaaggctt ccagccggtc ggcaaagatt ttcccgtgtt tctccatccc
    34141 gaaacgcacg aagaatacgc cctcgcccgc accgagcgca aaaccgccaa aggttacgtc
    34201 ggtttcagtt tccacgccga caaagacgtt acgctggagc aggacttgat gcgccgcgac
    34261 ctgaccatca acgcgatggc gcaagatgcg gacggcaaga ttatcgaccc tttcggcgga
    34321 caacgggatt tggcggcagg cattttgcgc cacgtttccc cggccttcgc cgaagacccc
    34381 gtccgcatcc tgcgtactgc ccgctttgcc gcgcgttaca ggtttgaaat cgccgaagaa
    34441 accataaagc tgatgcggca gatggtggaa aacggcgaag cggacgcatt ggttgccgaa
    34501 cgcgtctggc aggagtttgc gaaaggtttg atggaaaaaa atccgcgcaa aatgattgaa
    34561 gtgttgcgcg aatgcggcgc gctcaaagtc ttgctgcccg aagtcaatgc cctcttcggc
    34621 gtgccgcaac gcgccgacta ccatcccgaa atcgacagcg gcatccatac cctgatgacg
    34681 ctgcaacgcg ccgccgatat gggtttgagc ctgcccgaac gctatgccgc cctgctgcac
    34741 gacttgggca aagccaaaac accgtccgac atcctgccgc gccaccacgg acacgacctc
    34801 gccggtgtcg aacccgtgcg cgaagtcaat cagcggctgc gtgcgccgaa acattgcgcc
    34861 gagcttgccg aacttgtctg ccgttggcac atcatcttcc atcaggttga aaaactccgc
    34921 agcaaaacca ttatcgacgt attgaaaaaa accgatgcct tccgccgccc agaacgtttt
    34981 cagacggcat tgaacgtctg cattgccgac acgcaaggcc gtctgaaccg cgaacacacg
    35041 ccctacccgc aacgcgcgca ctggctcgcc ttactcgaag ccgccaatca ggcggattcg
    35101 ggcaaaatcg ccgccgaatg ccgcgcgcag ggaaaagcgc accttatcgc cgaacaaatc
    35161 gaccgggcgc ggctggcaca aatcgcccca ttgcaaaaag cgtttcgagc ggcgcaagac
    35221 aaaacagaaa aacattaaaa cgtccaatgc agcca
//
LOCUS       DAWKOX010000003        30069 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.003, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000003 DAWKOX010000000
VERSION     DAWKOX010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 30069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30069
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.003"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(249..896)
                     /locus_tag="WJK78_000088"
     CDS             complement(249..896)
                     /locus_tag="WJK78_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HEZ7597073.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(893..1261)
                     /locus_tag="WJK78_000089"
     CDS             complement(893..1261)
                     /locus_tag="WJK78_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ7597074.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(1271..1942)
                     /locus_tag="WJK78_000090"
     CDS             complement(1271..1942)
                     /locus_tag="WJK78_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ7597075.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(2107..2826)
                     /locus_tag="WJK78_000091"
     CDS             complement(2107..2826)
                     /locus_tag="WJK78_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ7597076.1"
                     /translation="MATLSDKTILITGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            complement(2910..4223)
                     /locus_tag="WJK78_000092"
     CDS             complement(2910..4223)
                     /locus_tag="WJK78_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ7597077.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARYADVTLFEAGRQAGG
                     RARALAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKGKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTAQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFASAEACLQSLSDAV"
     gene            complement(4621..5493)
                     /gene="hpnD"
                     /locus_tag="WJK78_000093"
     CDS             complement(4621..5493)
                     /gene="hpnD"
                     /locus_tag="WJK78_000093"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ7597078.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCHRVAGVVGCLIARILGFSDDQTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYCE
                     AVSLLPAADKKAQKVGLVMAAVYYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            5664..7526
                     /gene="hscA"
                     /locus_tag="WJK78_000094"
     CDS             5664..7526
                     /gene="hscA"
                     /locus_tag="WJK78_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ7597079.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGGNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCRLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMPIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDDTITQMLKDSMSNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLEAEELQQI
                     RQGIADLQGRVKDGKAEDIRAAAAKLGSITDNFAAKRMNRNIQRALTGQSVDNI"
     gene            7602..8249
                     /locus_tag="WJK78_000095"
     CDS             7602..8249
                     /locus_tag="WJK78_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ7597080.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISDVSNFEGRMRHLENNGYANVA
                     GLERILAVKTDNYKEKENLLHEIFSKSRTELFAVDENLVKRLFLSLRGEIVFPKNETA
                     ESEFEKSVHERRQEGNAGSGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSKIRL
                     FKEAYLRKSGTRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAEGRKPR"
     gene            8285..9046
                     /locus_tag="WJK78_000096"
     CDS             8285..9046
                     /locus_tag="WJK78_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ7597081.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESICV
                     PVDDISDWMFVCNGIPYGGFTVQAMRGQMTEEERTEHDAAWGIDFGDPGQILLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNSDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGASPASTTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            9102..9443
                     /gene="fdx"
                     /locus_tag="WJK78_000097"
     CDS             9102..9443
                     /gene="fdx"
                     /locus_tag="WJK78_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ7597082.1"
                     /translation="MPKITVLPHATLCPEGAVIDNAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(9730..10317)
                     /locus_tag="WJK78_000098"
     CDS             complement(9730..10317)
                     /locus_tag="WJK78_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ7597083.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHHQNRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLSGSGGGFT
                     VTAESVSAACPELEGRYLELVRRAAVSFGFTQGWENPAGGQEKTQAVPDAASGHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            10530..10727
                     /gene="iscX"
                     /locus_tag="WJK78_000099"
     CDS             10530..10727
                     /gene="iscX"
                     /locus_tag="WJK78_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ7597084.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(10795..11196)
                     /locus_tag="WJK78_000100"
     CDS             complement(10795..11196)
                     /locus_tag="WJK78_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ7597085.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            11407..12366
                     /locus_tag="WJK78_000101"
     CDS             11407..12366
                     /locus_tag="WJK78_000101"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ7597086.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDYAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            12434..13744
                     /gene="tilS"
                     /locus_tag="WJK78_000102"
     CDS             12434..13744
                     /gene="tilS"
                     /locus_tag="WJK78_000102"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ7597087.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKICVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHLLN
                     NVRALQEDLALLDEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRHFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNVQGFELHHYAGRLFVFRPEKTDKLRFLKDRQISGNLR
                     EILAGQGFVLKRHPFGLPGHLLEQDGILRTVAASDRLAVGGIHKDVKKILQEKRVLPA
                     LRPFWPVVADKDNRPLALANYGTDFQISVSDGILPVHPDFPVLF"
     gene            13795..14580
                     /locus_tag="WJK78_000103"
     CDS             13795..14580
                     /locus_tag="WJK78_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ7597088.1"
                     /translation="MKHISSANNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGGMPVGVYIPEAKMPSEEVRKLTAVLPEDGVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGIGAVVLGKGCADAWSPKVLRAGM
                     GAHFLSEIYPQADLEIWLARYEDRVFATALREEKQAVLYNEDLREPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            14590..14787
                     /locus_tag="WJK78_000104"
     CDS             14590..14787
                     /locus_tag="WJK78_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597089.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            15057..15401
                     /locus_tag="WJK78_000105"
     CDS             15057..15401
                     /locus_tag="WJK78_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597090.1"
                     /translation="MRIFYDPTRAIYDSGADYLTREKHRFVVIANSAWGLLLNLSCYY
                     DKVLEKRKIPFGKQEIDDDMDKVSAHKRKFKDISEIKVGDGWEYPFNYEQGMKELDEV
                     LLKYIPFFEEER"
     gene            15413..15718
                     /locus_tag="WJK78_000106"
     CDS             15413..15718
                     /locus_tag="WJK78_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597091.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPRENTHKDASNTGAKTH"
     gene            15780..17156
                     /gene="mpl"
                     /locus_tag="WJK78_000107"
     CDS             15780..17156
                     /gene="mpl"
                     /locus_tag="WJK78_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ7597092.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     KAGHVAWSLMGGHNRMNALAVIAAARHAGVDIQTACEALSTFKNVKRRMEIKGTVNGI
                     TVYDDFAHHPTAIETTIEGLRQRVGNARILAVLEPRSNTMKLGTMKSALPESLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNARTGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            17363..18415
                     /gene="bioB"
                     /locus_tag="WJK78_000108"
     CDS             17363..18415
                     /gene="bioB"
                     /locus_tag="WJK78_000108"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ7597093.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(18494..19127)
                     /locus_tag="WJK78_000109"
                     /pseudo
     CDS             complement(18494..19127)
                     /locus_tag="WJK78_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
     gene            19450..19710
                     /locus_tag="WJK78_000110"
     CDS             19450..19710
                     /locus_tag="WJK78_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ7597094.1"
                     /translation="MTKAVRRKNVQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(19773..21632)
                     /gene="ilvD"
                     /locus_tag="WJK78_000111"
     CDS             complement(19773..21632)
                     /gene="ilvD"
                     /locus_tag="WJK78_000111"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ7597095.1"
                     /translation="MPDYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPHSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPKNRDRYVSAALRAYGAMATSADKGAVRDIAQIER"
     gene            complement(21804..23573)
                     /gene="cysI"
                     /locus_tag="WJK78_000112"
     CDS             complement(21804..23573)
                     /gene="cysI"
                     /locus_tag="WJK78_000112"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ7597096.1"
                     /translation="MTVQTKTKGLEWQEKPLSNNERLKTESNFLRGTILDDLKDQLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSYYRSIRLTNRQTFQFHGVPKTKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESALHQQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGGGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIDDLDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(23600..25414)
                     /locus_tag="WJK78_000113"
     CDS             complement(23600..25414)
                     /locus_tag="WJK78_000113"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ7597097.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPAAEPFSVTVLSASQTGNAKSVADKAADSLKAAGIQVRLAELKD
                     YKAKNIADERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCQAGKDFDRRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQAMPPADLQTVPESRYCKADPFPAALLANQKITARQSDKDVRHIELDLSGSDLSYQ
                     AGDALGVWFDNNPALVGEILDLLGIDPATEIQAGGKMMPVARALSSHFELTQNTPAFV
                     KGYAAFAHYEELDKIIADNAVLQDFVQNTPIVDVLHRFPASLTAEQFIRLLRPLAPRL
                     YSISSAQAEVGDEVHLTVGVVRFEHEGRARTGGASGFLADCVEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFAADFLYQTEWQ
                     QFAKEGFLHKYDFAWSRDQEEKIYVQHKIREQAAELWQWLQEGAYVYVCGDAAKMAKD
                     VEAALLDVIIQAGHLNRDDAEEYLNTLREEKRYQRDVY"
     gene            complement(25411..26697)
                     /locus_tag="WJK78_000114"
     CDS             complement(25411..26697)
                     /locus_tag="WJK78_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ7597098.1"
                     /translation="MTAQHQAPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDAHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ETLPGADEVSRTADDFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDESTYGTVAAGMIL"
     gene            complement(26736..27659)
                     /gene="cysD"
                     /locus_tag="WJK78_000115"
     CDS             complement(26736..27659)
                     /gene="cysD"
                     /locus_tag="WJK78_000115"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ7597099.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFQLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(27697..28437)
                     /locus_tag="WJK78_000116"
     CDS             complement(27697..28437)
                     /locus_tag="WJK78_000116"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ7597100.1"
                     /translation="METTLFKPALWQIPHIGSGGETALAEKTETLKQRLHRIVGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRF
                     RPVREDADRYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRDIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(28448..29899)
                     /gene="cobA"
                     /locus_tag="WJK78_000117"
     CDS             complement(28448..29899)
                     /gene="cobA"
                     /locus_tag="WJK78_000117"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ7597101.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKGKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGD
                     RTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAA
                     VGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALI
                     AERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLH
                     EKLAWFGENGEGENRVGQTYPALGGLNAGQRAA"
BASE COUNT         6487 a         7909 c         8631 g         7042 t
ORIGIN      
        1 tcggttccgt actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat
       61 ccactatacc atacaaccac gccggaatta agtttaaatt tgaataaaag gttcgggttc
      121 tgcaaaatac agaacccgaa ccttgttcgg atattgaaac cggccgcccg attttgggcg
      181 gtgcggcttg caagtatcaa gattcgcata tgccgtctga agctcggaga ggttcagacg
      241 gcatatgctt atttgggctg ctcttcgacg aatctcggac ctttcaagat gccgttgtga
      301 gaatagggcg acagcaggtt gtatgcggcg gttttggaaa cctgataacc gcggtcggtc
      361 aggctgttgg caatctgatt gaccactgcg ctgaccaaag cccccaacag gccgctgttg
      421 ctgttgttgc tgccttcgcg gatgctggcc gaacccgacc acaactcttt tccgttgcgg
      481 gaatcgacca gccgtgcttt ggcggatacg gtcgtcacgc tgtctaaaat ttgatatgaa
      541 gtgccgtatt cggtaaccgt aatgtacaaa accgcatcat tgccgaaaat ctgatgcagt
      601 ttttccggcc ggacggcgtg aatatcggcg gcattggtca agccgttttg tttgaaggtt
      661 tcctccacga ctgcggcggg gaagacgtaa tagccggctt cggaaagcgg cgcggcggtc
      721 gaagccagta caccccatgt tccgttgaca tcgggcgatt cgttcagcgg cggaaccacc
      781 aaaattgaag ccggtttgct ttccttgaat gacgtgtagt cgaaatcggg cgctttttga
      841 acttggcagg cagacagcgc caacacggcg gcaagcccta aaatcaaagg tttcatcgct
      901 tgcctccttt acctgttttc atcaggaagt ccataaatac gcccgattcg ggaaacagcc
      961 ttttctcttc ttcaaactgg cggaacgcgc cctctttgtc tcccgaacgg gaaagcagca
     1021 gtcccagatg ggcgtgcgca cccggggcgg cattcatttt tttgttgccg gcttccacaa
     1081 agtatttttc catcttttcg gtctgcttgc ccaacgaagt gtcgtcgttt ttcaaacctt
     1141 catagacggt atcgggatag ccgccgtaat aatacaggga tttttgcccg ttgccgccgc
     1201 aggcggtcag agccaagacc gccgcacaca gcgacaaacg gctcaaggtt ttcggattca
     1261 tcatttctcc ttaacggttg ggttgccatg cgccgttgtc aacagcctga accaggctgt
     1321 tgacggcttc gcggattgcc aagtctaaaa ctttgccgtt caaagtcgca tcgtagccgg
     1381 aagtgccgcc gaaaccgatg atttcacggt tggaaagtgc gtattcgccc gcgccctgtg
     1441 cggaatagac gatttcggaa gtattgacgt tgacgatatt cagagccact tttgcatagg
     1501 cgatttgcga tttgccgcga cccaaaatgc cgaagagctg atgatcgccg acatctctgc
     1561 gtccgaattc ggttacatcg ccggtaacga cataatctgc gcctttcagg ttatgcgctt
     1621 tgccggaaat gccggattcc tgttttaatg cgttcaaatt ggtgcggttc agtacgttga
     1681 agcggttggt ctgttgcagg tgcgttacca gaatggtttt tgcctggctg cccaaacggt
     1741 cttccccgtc ggagaaaatg cctttttgga agctggagcg gttgtcgaat gttccgacgg
     1801 aaatcggggt acgaacaccg tgatattgcg tattgtagga ggcgactttc tctacctcga
     1861 gactgcgtga ggattcggtc gcacagccgg tcagtgaaac ggcagcggcg gcaaggacaa
     1921 cggcggtgga aacggttttc ataaaattta ccctaaggtc aagttaagga aataacgggt
     1981 tatcattatt gtccttatgt aaatttaagt caaggtgttt gtctgtgcgg gacggatgcg
     2041 cgcggaaggt acggatattt ttcaaacgga atcgcggcgc gggcgggatg cctgcctttt
     2101 ccggatttag aggtaaacga tttcgccgct ccgccctttg ctttcggtac ttgcccacca
     2161 gacaaatgcg ggcagcacgt ccccgtagct tttgcgttcg cttttggctt cgcccggatg
     2221 ggatttgatg cgttgcgggg aattgatggg gccggggacg aggacgttgg cgcgcaggtt
     2281 gccgaagcgt tcccattcgt cggcggcgac tttgcacagg tagttcaacg cggctttgga
     2341 cgcgccgaag ccgccccagt aggctttggg tgtttcgccg tggctttcgc cgacgaagat
     2401 gacggacgcg tcgggcgact gcttcagcag cgggaacagg gcgcgggtca gccccatagg
     2461 tgcgacggtg ttgatgcggt attggttgac ccattcggcg acggtttgga aatccagcgg
     2521 cgagagggcg taaaaatagc cggcgcagtg gacgatgccg tccagtttgc cttgcgtggc
     2581 ttcggcaatg gtggcggcga actgattgaa ttctttttct tccgcactca tcaggtcgaa
     2641 acggatggcg aagggttcgg ggtgtccggc ttcgacaatc gcgtcataga ctttttccag
     2701 ttttttctga tggcgtgcca ccagaatcac ggttgcgcct gccgccgcat aggctttggc
     2761 gacctgttcg cccagacctt gcgatgcgcc ggtaattaag atggttttgt cggacagtgt
     2821 cgccatactt tttccttttt ggtggtcggt cgggggtatt ttagcgtttt gccgcacctt
     2881 gtaaagcgtc ccgataccgg ccggcgtttt cagacggcat cgctcaggct ttgcaggcag
     2941 gcttccgccg acgcgaaacc tgattgtacg gcggcttcga gcgtggcggg gtagtctggg
     3001 tggaggtagt cgccggcggg gaagatgcgg tgccggtgca accacgacaa atccggcggc
     3061 ggggcatcgg ctgcggttgt ggcgcgtttt tcggtgatga cgcgcacggc ttcgggttcg
     3121 cccaaatgcg gaaggatgcg tttgaggtcg gcgtgaactt tgtccgccca cgctcggttt
     3181 gtaaacgcgc cgacgcggtc ggaaacgctg atgacggcgg acacttcgtt ttcaggcagt
     3241 ccgagcctgc cccggcaaag caaccattgt gccgtgccgt cggcaaggcc ggtcagcggg
     3301 gcgggcaggc ggacgggttc ggcgtagcgc agatagacgg tggtgatggc gtgatagcga
     3361 aggttttgat atgccgtctg aacgtgttcg ggcgtgcctt cgggcaggag cgcggcggcg
     3421 tggtagggcg cggtggcggg gacggcggca tcgaaagctt cgccgttgac gagcactttc
     3481 ccgtccggga gggggttcag acggcatacg cgcgtttcga ggcggatgtc cgcgccgagc
     3541 cgttgaagct ccgccaaggc aggttcggcg acgattgcgc ccaaatcctg cttgggtagg
     3601 agatagtcgc tgccggattt tttcgtcagc acgccgtcgg acaaaacgtt gcacaacacg
     3661 cgcaggcttg cggtttccaa aggcgtgttg agcgcacccc acaccagcgg ctgccaaaac
     3721 tgcatcacgg cggcacgcgg cacgttccgc tgtttcagcc attgtgcaac tgtcgtgtcg
     3781 ggctgtccga ggcgtgcgga cttctgcaaa tcggacatat cggcaagcag tttgcctttg
     3841 aatgcggacg gtacgcgccg ggcaagcagc acgccgccca aaatatgcag cggtgcgggc
     3901 agggggaggg cgcggaactg taaaccgccg tgcatatgcc agtgcagcgg tacgcgcaaa
     3961 aaggcggcac gggggtctga accgatggtt ttcatcaggc gcaacacgcc ccggtatgcg
     4021 ccgagcaaaa tgtgctgccc gttgtccaaa aaaccgaaac cgtcggtatt tccggccagt
     4081 gcgcgcgccc tgccgcccgc ctgccggccg gcttcaaaca gggtaacgtc ggcgtaccgc
     4141 gccaaggtga cggcggcgga cagtcctgcc cagcctgcgc cgatgacggc gattttcggg
     4201 cgcggatgcg gcgtgttcat catttattcc tccaatggtt ttgcagccgt atctatttcc
     4261 gtttctgaaa atgacggtag aaaaggatac aggctaaaaa taaaggcagc agaaagcgcg
     4321 catagggata tcacggatgg tctgcatgcc agtatccgta ccgtccctgt ggaacggtat
     4381 catagcggta attgtcgggg aaaaagttga tccaaaccgt tactgccggc cataaggcta
     4441 tatccctgac tgctttcatt tgcttctgct cctgtttaaa ttcccggcaa ttcgatttca
     4501 aagcgcgaac gccaacggga ttgcgcggtt acgatgcaga ctttcagacg atggttgaaa
     4561 ccccgtccgg cggggctgtg ggaatcgggt ttgcctgacg ggcggcgggc ggtatgcgcc
     4621 ttatgcccgt tccggcgtgc cggggcgcgg tttgaatccg aataaccagg ttttcagggc
     4681 aatgcgtttt ttgcgcggcg aagggagggc gattttgtat ttgaggacgt tttgtgcgcc
     4741 gtcccggtcg atttcgttca atagctcgta ataaaccgcc gccataacca gtccgacttt
     4801 ttgggctttt ttatcggcag ccggcagcag cgatacggct tcgcagtagg tttcacgggc
     4861 gcgtttgatt tggaacgcca tcaattcggc aaaattgccc gtcgggctgc attgcaaaat
     4921 cacgcttgcg ggtacgtcaa accgccgcat ttcctccatc ggcaggtaaa tccgtcccct
     4981 gcgcgcgtct tcgccgacat cgcggatgat gttggtcagt tgcagcgcaa gtcccatctt
     5041 gtcggcgtat tccagcgttt ggtcgtctga aaaccccaaa atccgcgcaa tcaggcagcc
     5101 gaccacgcct gcgacgcggt ggcaatacag tttcaattct tcaaaactgc cgtaacgggc
     5161 ttgaaccaaa tccatctgca tcccgtcgat taaggcttcc agttcatatt tcggcagctt
     5221 gaaggtttcc ttaacttgcc gcaaggcctg attgacgggg tgttccggca tcgcgccgcc
     5281 gaataccttg tccaaatcgc cgcgccacca gttcaatgtc gcctgtgcaa catcggggtt
     5341 ggaacattcg tcaaccacat cgtccaattc gcggcaaaaa gcatataaaa ccgttaccgc
     5401 atcccgtttt tcctgagtca ggaaacggaa gcccgacaaa aaactggagc ggctttcttc
     5461 tgctttttgg cggcaatagt cgagtccttt cacgatttat attcctaatg atgggcggga
     5521 aaggcggatt ttatcggcat ttggcggtag agggcaattt cggcggcacg acctaatcct
     5581 tagcggtttg ctcaactatc ggcgcaaatt ctgttaaaat gccgctttcc ttcctttaca
     5641 caccgcaccg acaggcagaa tttatggctc ttttgcagat ttcagaaccg ggtatgtccg
     5701 ccgccccgca ccggcaccgt ttggcggcag gcatcgattt gggtacgacc aacagcttgg
     5761 tcgccaccgt ccgcagcggc agtgccgcct gcctgcccga tgccgaaggg cgcgttaccc
     5821 tgccttccgt cgtccgctat ctggaaaacg gcggcattga agtcggcaaa accgccctgt
     5881 ccgcccaaaa aaccgacccg ctgaacaccg tcagctccgc caaacgcctt atcgggcgga
     5941 cgcttgccga tctgcatcaa aatacgcact acctgcctta ccgtttcggc ggcaatcaac
     6001 gcgttatcga actgcatacg cggcaggggg tgaaaacgcc tgtcgaagtg tcggcggaaa
     6061 tcctcaaaac ccttaaatcg cgcgccgaag aaaccttggg cggcgatttg gtcggcgtgg
     6121 tgattaccgt ccccgcctat ttcgacgatg cccaacgcca ggccaccaaa gatgccgcgc
     6181 gtctggcggg tttgaacgta ttgcgcctgc tcaacgaacc caccgccgcc gcaatcgcct
     6241 acgggctgga caacgcctcg gaaggcacgt ttgtcgtgta cgacttaggg ggcggcacat
     6301 tcgacgtatc cgtattgcaa ctgaccaaag gactgtttga agtcaaagcc accggcggca
     6361 acagcgcgtt gggcggcgac gatttcgacc accgcctgtt ctgccgcctg ctcgaacaaa
     6421 acggactctc ccaactcaac gaacaagaca gccaactcct gctctcgctc gtccgcgccg
     6481 ccaaagaaca attaaccacg caaaccgaag cgcgcattca ggcgacgctt tcagacggca
     6541 tgccaatcga cacaagcatc agtcgcgccg agttccacaa cctgacgcag catttggtga
     6601 tgaaaacgct cgaaccggtc acacaggcgt tgaaagatgc cggtgtcggt aaaaacgaag
     6661 tcaaaggcgt gattatggtc ggcggttcga cccgtatgct gcacgtccaa caggcagtcg
     6721 ccaccttctt cggacaaacc ccgctgaaca acctcaatcc cgacgaagtc gtcgcgctcg
     6781 gcgccgccat acaggcaaac gtcctcgcag gcaacaaaac cgacggcgaa tggctgctgc
     6841 tggacgttac acctttgtcg ctcggtttgg aaacctacgg cggcttggcg gaaaaaatca
     6901 tcccgcgcaa ttccaccatc cccaccgcgc gcgcgcagga ctttactacc ttcaaagacg
     6961 gtcagaccgc gatgacgata cacgtcgtac aaggcgagcg cgagctcgtt tccgactgcc
     7021 gcagccttgc caaattcacc ctgcgcggca ttccgcctat ggcggcgggt gcggcgcgta
     7081 tccgcgtaac cttccaaatc gatgcggacg gtctgctgtc cgtttccgcc caagaacaaa
     7141 gcaccggcgt acaggcgcaa atcgaagtca aaccttccta cggcttggac gacgacacca
     7201 tcacccaaat gctcaaagac agcatgagca acgccgccga agacatggcg gcacgtgccc
     7261 gagccgaagc cgtggtcgaa gccgaaagcc tgaccgatgc cgtcaacgcc gccctcgagt
     7321 tggacagcga tttgctggaa gccgaagaat tgcaacagat tcggcaaggc atcgccgatt
     7381 tgcaaggccg tgtgaaagac ggaaaagccg aagacatccg tgccgccgcc gccaaactcg
     7441 gcagtattac cgacaatttc gccgccaaac gcatgaaccg caacatccaa cgcgcgttga
     7501 ctggtcaaag cgttgataat atttgacggc aaatggtttc agacggcata gatataacct
     7561 gataccgtct gaaggctcga aaacacttga aaaacatcga tatggaaaag tcaggcattg
     7621 tctatctgat gaaaaccgtc atcaagggcg tgtataaaat cggcatttcg gacgtaagca
     7681 attttgaagg cagaatgcgc catttggaaa acaacggcta tgcgaacgtt gccggattgg
     7741 aacgcatcct cgccgtcaaa accgacaatt acaaagaaaa agaaaacctg ctccatgaaa
     7801 tttttagtaa aagcaggacc gaattgttcg ccgtggacga gaatcttgta aaacgtttgt
     7861 ttttatcgct tcgcggcgaa atcgtgttcc cgaaaaacga aacggcggaa tcggaatttg
     7921 aaaaaagcgt ccacgaacgc aggcaggaag ggaatgccgg atccggtcgc aaacaactgc
     7981 ttgatttggt acggcgcgga caccgggaat acccttacgc gctgccccgg cttttggcgg
     8041 gcgcggcatc ctacaagccg aaaaaatcga aaatccgcct ttttaaagaa gcatatttac
     8101 gcaaaagcgg tacgaggctg accgacgaaa ttgcagacgg catccatatt tacacctgtt
     8161 tttcgcgggc ggatttggaa aaagcctatt ccgaatattt ggaacttttc aaatccgaat
     8221 cggatgccga aggcagaaaa ccacggtaag gtgcaaacag ataccgtaca cgttgaggag
     8281 cagtatgatg ggcgattccg tcatttatta tgtagaacag gcagacgaac cggtaaaccg
     8341 tgccggcgaa cgcgcccgta aaacattcaa atacttttgg cgcgagcttt tttgggaacg
     8401 ccgccgcatc attcccgcct tagattttgc catggtcaaa gccccttttt tccaagacgg
     8461 cgaagacggc gaaatttgcg aacatatgtg gatcgacgat atttattttg acggtcttta
     8521 catttatggc gtgctgaaca atgaacccgg cgaactgacc aatgtcgaac aaggcgaaag
     8581 catttgcgtt ccggttgacg acatcagcga ctggatgttc gtgtgcaacg gcattcccta
     8641 cggcggcttt accgtacagg caatgcgcgg gcagatgacg gaagaggagc gcaccgaaca
     8701 cgatgccgca tggggaatcg atttcggcga tcccgggcag atattgctgg tgtatgaaga
     8761 aaaagaacat cccgaaaatc tggaagagca tccgatgtgc cggaactgta ttgacgattt
     8821 tcggcaacag ttgtcccaaa attcggattt tctgcatgag caggacgaag acggctatac
     8881 gccgcttcat catgaagcca tcgcaggaaa tgcacttatg gttcaagcca tgcttgaata
     8941 tggcgcaagt cctgcctcaa cgacatcgga aggctatacc gccctcgatt ttgcccgcct
     9001 ggcgggctgg caaaatgttg ccgacctgct cgaaccgaga cattaggcag acagttttcc
     9061 gaaaaacgga cgcaaccact ttttacagaa agacaataaa aatgcccaaa attaccgtac
     9121 ttccacacgc gacgttatgc cccgagggtg cagtcatcga taacgcgccg gaaggcaaaa
     9181 ccgtcctcga cgtactgctc gaccacgaca tcgaagtcga tcacgcctgc gaaaaatcct
     9241 gcgcctgcac cacctgccac gtcatcatcc gcaaaggttt cgacagtttg gaagaaccga
     9301 ccgaattgga agaagacctg ctcgaccaag catggggttt ggaagccgat tcgcgcctga
     9361 gttgtcaggc ggttgtcgcc ggcgaggatt tgattgtgga aatccccaaa tacaccatca
     9421 accacgcgcg cgaagaacac tgaaaacagg ccgtctgaag ccggcacgct tcagacggca
     9481 ttgttgcgcg gataaggcgc aatcgcccga aaacaggcgt tcgtacaggc ggaactttcg
     9541 attctatagc gaattaacaa aaatcaggac aaggcggcga gccgcagaca gtacaaatag
     9601 tacggcaagg cgaggcaacg ctgtaccggt ttaaatttaa ttcactatat attgattttt
     9661 atcggttttc tgacggaacg gattggtgcg gcatccgagg cggattactc gggcgcgatg
     9721 cacgggtatt tatcggtttt gcagccggaa aaaccgccgg cgggttactt tcagggcggc
     9781 ggtcgggcgg tatgccggat agcgttccac tttcgcttct atattgattt tgattggttt
     9841 tctgacggaa tgacccgatg cggcatccgg gacggcttgt gttttttcct gcccgcctgc
     9901 cggattttcc catccttgcg tgaaaccgaa agagacggcg gcgcggcgga caagctcgag
     9961 atagcgtcct tcaagctccg ggcaggcggc ggacacgctt tctgccgtaa ccgtgaagcc
    10021 gccgcccgac ccggaaaggc gttccgcaat ctgcgtgtag atacgccaac gttgggcgcg
    10081 caacattgcc gcatcgcaac cggcagccgc tttatccaag gcaatcaggc cgcgccggtt
    10141 ttggtggtga aggcaaaccg ttactctgga gaggatatgt tgcccgtcca atatttgata
    10201 cagtttgcgt atcagcagaa tcaggcggtc aaactcctcc atctccgaca gggaatcagg
    10261 atggtcggaa gcggtataaa ccagtttgga caattttgcg gcaaacatat tgttcatcaa
    10321 tcttccttgt cggttgaaac cccgctcttc ggggcggtag aatcagattt gtttgggagg
    10381 gacaactcct cccagatcag gacgacacat aggctggtgc ttgatgtgtt gtccggcgag
    10441 ttgaaacatt cagccatcct caaggtgcgg cagttttgcc gaaacatatt ctacacggct
    10501 tcaatgccgg acgataaaag gaaattcata tgaaatggac cgacacccgg cgtatcgccg
    10561 aagaactcta tgacctgcac ggcgaaacca tcgatcccag aaccgtgcgc tttacccaac
    10621 tgcgcgacct gattatggca ttgcccgaat ttgatgacga tcccgcccgt tgcggcgaac
    10681 gtattctcga agccgtgcag caggcatgga tagacgaggc agaataagtt tcgggaatgc
    10741 cgtctgaaat acggcggtac gcggttcgtg cttctgtttg cagtgggaac ggttttacca
    10801 gtctcctttt ttcagcctat ccagttggcg gcggtcgcgc ttggtcggtc tgccgtcggg
    10861 atgggcggaa gtgatgcggc tgaattggtc gagctgtttg cgctcttccc tcaatgctgc
    10921 cgtttttgcg tcttcttcat acagaagccg cgcctcggat gccgggcggc gttggtggtt
    10981 caaaccttta accttgattt tatagggaag ggaattgagc gtcaggtcga taatatcgcc
    11041 gatgtctatg gttttactgt ttttgacctt cgagccgttt acttgaaccc tacccagttc
    11101 gatgtgcttt tgcgcaaggg aacgggtctt gaaaaaacgt gccgcccaaa gccatttgtc
    11161 cagccgcatg gcggaagaat cgtgcttgtc tttcatacga ttttgtttga aataattgaa
    11221 tttgtttcga gtttagcata agatacgccg cctataacta gtatatatgc actaatccac
    11281 tgttttccat gctgtccgaa cacaaaaaga gggtgtggaa aagccgtttt ggacaataaa
    11341 ttaactgcgg aatatgcaca aatagcgtat gatagcggca gaatctgttg atgagagctt
    11401 cattctatga aacctgtttt tttggatttt gaacaaccca tagccgaact gaccaacaaa
    11461 atcgatgagc tgcgtttcgt ccaagacgag tctgccgtcg atatttcgga cgaaatacac
    11521 cgtttgcaga aaaaaagcaa cgacctgacc aaatcgattt tcagcaaact cacacccgcc
    11581 caaatttcac aggtttcccg gcatccgcag cgtccctata ctttggatta cattgaggca
    11641 ctgtttaccg attttgaaga actgcacggc gaccgccact ttgccgacga ttatgcgatt
    11701 gtcggcggat tggcgcgttt caacggacaa agcgtgatgg tcgtcgggca tcagaaaggg
    11761 cgcgacacca aagaaaaaat ccgccgcaac ttcggtatgc cccgtcctga aggctaccgc
    11821 aaagccctgc gcctgatgaa gacggcagaa aaattcggct tgcccgtcat gacctttatc
    11881 gatacgccgg gcgcgtatcc cggcatcggc gcggaagaac gcggacagtc ggaagccatc
    11941 ggcaaaaacc tgtacgaact gacgcgcctg cacgtccccg ttttgtgtac cgtcatcggc
    12001 gaagggggct cgggcggtgc gttggcggtc gccgtaggcg attacgtcaa tatgctgcaa
    12061 tattcgacct attctgttat ctcccccgaa ggctgcgctt cgattttgtg gaaaaccgcc
    12121 gaaaaggcgg cggatgcggc tcaggctttg ggcattactg ctgaccgcct gcaaaagctg
    12181 gacttggtcg ataccgtcat caaagaacca ttgggcggcg cgcatcggga tttcgggcaa
    12241 accatgaaaa acgtaaaagc cgttttggaa aaacaactgc acgaagcgca aagcatcccg
    12301 cttgccgatt tgctttcgcg ccgtttcgac cgcattatgg cttacggcaa attttcggaa
    12361 caataattca ggtagaacaa gcagcaagca gtttgtctga aactgcttgc tttttcttta
    12421 tcgggacgga accgtgctga ctttagatgc gtttgagcaa tgcttgaagg attgttttcc
    12481 tcaaggtctg aatggaaaaa aaacagcggt ggcattaagc ggcggcttgg attccgtcgt
    12541 tttgctgcat ctgcttgtcc gcgccgggaa aaaaggcggt tttattccgg atgcattgca
    12601 tatccatcac ggcttgagtc cccgtgccga cgattgggcg gatttctgcc aaaactattg
    12661 cgatatgctc ggggtggggc tggaaacggt taagatctgc gtggaaaaaa acggtttggg
    12721 catcgaggcg gcggcgcggc aaaagcgtta tgccgcgttt gccgaaaaag gctttgacgt
    12781 tttggcgttg gcgcaccaca gggacgatca aatcgaaacc tttatgctgg cggtcgcgcg
    12841 cggcggcggt ttgcgcgctt tggcggctat gcccgccgtc cgcccttttg gggaaaaagg
    12901 cattatctgg cggcccttgc tgcctttttc gcgccaagat atatgggatt atgcccaaaa
    12961 acacggtttg ccgaatatcg aggacgaaag caatagcgat acggcttatt tgcgaaaccg
    13021 cttccggcac cgtattttgc ccgaactttc ggcgcagatt ccccatttcg ggcggcatct
    13081 gttgaacaat gtccgtgcct tgcaggagga tttggctttg ttggacgagg tcgtcgttca
    13141 agactgccgt tgggtttgcg gagccggtta tttcgatacg gcgcggtggc tgacgttttc
    13201 cccgcgccgg aaaacccata ttttgcggca ttttttgaag gaaaacggca ttcccgtgcc
    13261 gaatcagaat gcccttgccg acattgcccg ggttttgacg gaggcaaaaa ccggacgctg
    13321 gaacgtgcaa ggctttgaat tgcatcatta tgcaggcagg ctgtttgtgt tccgaccgga
    13381 aaaaacggat aaactgcggt ttttgaaaga caggcagata agcggaaatt taagggaaat
    13441 attggcgggg cagggatttg ttttaaaacg tcatccgttc ggacttcccg ggcatctttt
    13501 ggagcaggac ggaatcttgc ggacggttgc ggcatcggac aggctggctg tcggcggtat
    13561 ccataaggat gtgaagaaaa tccttcagga aaagcgggtt ttgcccgcgc tgcgcccgtt
    13621 ttggccggtc gtcgccgaca aggacaaccg tccgctggcg ttggcaaatt acggtacgga
    13681 ttttcaaatc tcggtttcag acggcatttt gcccgtccat ccggattttc ccgttttatt
    13741 ttgatggaat cggaatcgcc gttacctatt atatattctt gaaaaggcgg taaagtgaag
    13801 catatcagtt cggcaaacaa tgaacacatc agacacctgc accgcctgtt gtctcaaggg
    13861 aagttcagac ggcaatacgc ccaaaccgtt ttggagggcg tgcacctgct tcaggttttc
    13921 ctgcaatccg gcgggatgcc ggtcggggta tatattcccg aagcgaaaat gccgtctgaa
    13981 gaagtccgta aattgacggc ggttttgccg gaagacgggg ttttttccgt ttcagacggc
    14041 atattgaaga aaatcagcag cctgacttgc gcggatgatg tgcttgcgct gattgatatt
    14101 ccggatgcgg gtgctttgcc ggccggcggc gactgtgtgg ttttggacgg cgtgcaagat
    14161 ccgggcaatg tcggcacggt gttgcggagc gcggcggcgg caggaatcgg cgcggtcgtt
    14221 ttgggcaaag gttgtgcgga cgcgtggtcg cccaaagtgc tgcgagccgg aatgggcgcg
    14281 catttcttgt cggagattta tccgcaggcg gatttggaaa tatggttggc gcgttatgaa
    14341 gaccgtgtgt ttgccaccgc gttgcgtgag gaaaaacagg cggttctgta taacgaagat
    14401 ttgcgcgaac cgacagcctg ggtgtttggc aacgaaggcg cgggtgtcgg caaagcggtt
    14461 ttagacaggg cggacaagtg cgtcaggata ccgatgcacg atgcaaccga gtctttaaat
    14521 gtcgcgatgg cggcgacaat ctgcctgttt gaacagatgc ggcagcggtc ggcgtattga
    14581 ggaaaagaaa tgccgtctga aaaaatctat tacggcgtat tgattttctt atgtatcgct
    14641 tctatgctgc tgtcgccgtt tttttatgcg ggtgctttga agcccaagaa ggcggcattg
    14701 cggaaggacg ggcagtggaa actcatctta ttgtccaata ccgtggcggc ggcggttttg
    14761 gcttgggtgt ggtggaaatg gttttgacag atattgctca aaatcgtgct aatggaatcc
    14821 gaacaaataa agaattttgt aaaaaatttg ttaaatcaac gaattaaagt tttgtggaaa
    14881 acaaaacagc tctaagcaaa tagggcgttt gtcggtaaat acggaagagt tgcggcatta
    14941 tcgggcatct ttaacaagta gtgccgtctt ggcaggcaat cggtttttat gggcagcttg
    15001 caaaatcgcg gatataaaat tgcgaatcgg ttaaagtgtg gggacgctat gaaaaattgc
    15061 gaatttttta tgacccgaca agggcaatct atgatagcgg tgcagattat ttaaccagag
    15121 aaaaacatag attcgtcgta attgcaaata gtgcttgggg gctattgctt aatttatctt
    15181 gttattatga caaggttttg gaaaagcgga aaataccgtt cggcaaacag gaaattgatg
    15241 acgatatgga caaagtgtcc gcccataagc ggaagtttaa agatatttct gaaatcaaag
    15301 taggggatgg ttgggaatac ccgttcaatt atgagcaggg aatgaaagaa ttagatgaag
    15361 tgctattgaa atacattccc ttttttgaag aagaacgata aaggaggttg atatgcgcgt
    15421 atctaaaata attggaagta tgttgcttgt tacagcggtt cagaccgtat tttcggcaaa
    15481 tgtttacgcg tgccgccata atggtaaaac cagttacagc caaactccgg gaaaacattg
    15541 taccaacgcg ggtttggggc gggatcgggt gtacagttcg gttagaccgg cagtaaaaga
    15601 cagggcggaa gacgcagggg tcggcgatta ttcggacacg gtgagggacg aacacgtcca
    15661 aaatccgaga gagaatacgc ataaggatgc ttcgaatacc ggtgcaaaga cgcattgatt
    15721 gaaaccgaat cagccatgac ggcgttgaat aatagaattt gaacgattag ggaactctga
    15781 tgaaacacat ccacattatc ggtatcggcg gcacgtttat gggtgggatt gccgccattg
    15841 ccaaagaagc agggtttgaa gtcagcggtt gcgatgcgaa gatgtatccg ccgatgagca
    15901 cccagctcga agccttgggc ataggcgtac acgaaggctt cgacgcggcg cagttggagg
    15961 aatttaaagc cgacgtttac gtcatcggca atgtcgccaa gcgcgggatg gatgtggttg
    16021 aggcgatttt gaaccgcggg ctgccttata tttccggtcc gcaatggctg gctgaaaacg
    16081 tgctgcacca tcattgggta ctcggtgtgg cggggacgca cggcaaaacg accaccgcgt
    16141 ccatgctcgc atgggtcttg gaatatgccg gactcgcacc gggcttcctt atcggcggcg
    16201 taccggaaaa cttcagcgtt tccgcccgcc tgccgcaaac gccgcgccaa gacccgaaca
    16261 gccaatcgcc gtttttcgtc attgaagccg acgaatacga caccgcgttt ttcgacaaac
    16321 gctccaaatt cgtgcattac cgtccgcgta ccgccgtgtt gaacaatctg gaattcgacc
    16381 acgccgacat cttcgccgat ttgggcgcga tacagaccca gttccaccac ctcgtgcgta
    16441 ccgtgccgtc tgaaggcctc atcgtctgca acggacggca gcaaagcctg caagacactt
    16501 tggacaaagg ctgctggacg ccggtggaaa aattcggcac ggaacacggc tggcaggccg
    16561 gcgaagccaa tgccgatggc tcgttcgacg tgttgcttga cggcaaaaaa gccggacacg
    16621 tcgcttggag tttgatgggc ggacacaacc gcatgaacgc gctcgccgtc atcgccgccg
    16681 cgcgtcatgc cggagtcgac attcagacgg cctgcgaagc cttgagcacg tttaaaaacg
    16741 tcaaacgccg catggaaatc aaaggcacgg taaacggcat cactgtttac gacgacttcg
    16801 cccaccatcc gaccgccatc gaaaccacca tagaaggtct gcgtcagcgc gtcggaaacg
    16861 cccgcatcct cgccgtcctc gagccgcgtt ccaacacgat gaagctgggc acgatgaagt
    16921 ccgccctgcc cgaaagcctc aaagaagccg accaagtgtt ctgctacgcc ggcggtgtgg
    16981 actggaacgt cgccgaagcc ctcgcacctt tgggcggcag gctgcacgtc ggcaaggatt
    17041 tcgatgcctt cgttgccgaa attgtgaaaa acgcccgaac cggcgaccat attttggtga
    17101 tgagcaacgg cggtttcggc ggaatacaca ccaaactgct ggacgctttg agatagcccg
    17161 ggcgatgccg tctgaaagcc cttcagacgg catcgtccgg ctgcgcggca caaaggcgga
    17221 aaaaccgttt gccccgtatt ttcaaacgcg ttacacttgc cgccgctgtt ttcagccatt
    17281 tgattacccg caaccgccgt cattgcgccg gcggtttgcc tgtcagcgtc attgcgccgc
    17341 tgtaaatacg aaagaacaca ttatgaccgt atcccccgtc gccttgcgcc gtaagaccga
    17401 gtgcaagcct catcccaccg cgcgctattg gaaaaaatgc gatgtcgaag ccctgttcgg
    17461 acttcccttc ctcgacctca tttaccaagc cgccgaaatc caccgccaaa atttcaaccc
    17521 gcgcgaaatc cagctttcca cgctgttgtc catcaaaacc ggcggctgtc ccgaagattg
    17581 cgcctactgt ccgcaatcgg cgcaccacaa caccaatctg ggcaaagaac agatgatgga
    17641 tgtggatgaa atcgtcgaaa aagccaaaat cgccaaatcg cgcggcgcaa gccggttttg
    17701 catgggcgcg gcgtggcgcg gccccaaacc caaagacgtg gagacggttt ccgcaatcat
    17761 caaagccgtc aagggcttgg gtatggaaac ctgcggcacg ttcggtatgc tcgaagaagg
    17821 tatggcggaa gacttgaaag aggcgggctt ggattattac aaccacaacc tcgacaccga
    17881 ccccgaccgc tacaacgaca tcatccatac acgccggcat gaagaccgta tggacacctt
    17941 gggcaaagtc cgcaacgccg gtttgaaagt ctgctgcggc ggcatcgtcg ggatgaacga
    18001 aacccgcgcc gaacgcgcag ggctgattgc cagcctcgcc aacctcgacc cgcagcccga
    18061 aagcgtgccg attaaccggt tggtcaaagt ggaaggtacg ccgcttgccg atgccgagga
    18121 tttggactgg acggaatttg tccgcaccat cgccgtggcg cggattacga tgccgcaaag
    18181 ttatgtccga ctgtcggcag ggcgcagcaa tatgccggaa gcgatgcagg cgatgtgctt
    18241 tatggcgggc gcgaactcga ttttttacgg cgacaagctg ctgaccacgg gcaatccgga
    18301 tgaagacggc gacagaatcc tgatggaaaa gctcaacctg tatcccttac agtttgagct
    18361 ggaaggcgag gtcgccgaag tggaaaaagc ctctgggatt aaagtggatt attgacgatt
    18421 gcaaaaatgc cgtctgaaac ccgaaaaaag gctttcagac gacatttgtt cggacggtat
    18481 ttccaatatc tttttaccgg cgcgtgatgt tgccgtcggg cgagacatcc agcccgttct
    18541 cgttggggaa gtcgctgcgg ttcagataaa taatccgccc gataacggtt tttcagggtc
    18601 gattttgggg attttatcgt cggcttgggt aatagggatg atagttccgg aaataaattt
    18661 accctgtttg ttggtgataa ttttgaaaat cggcgcaatg ccgctgatgc cggaggtgtt
    18721 gattgcgccg taggtggcaa agttgccgcc gctgtaagag atgaagcggt cgcggtaaag
    18781 ttcgacggcg cgtgtaacgt gcggccctgc ccgaatacga catccgcgcc ggaatcgacg
    18841 gcaagccgtg caaactcgac gacgttgccc ctgttttccc catagaagat ttcggtatcg
    18901 aacggcaggt gttccgcctg tttcccttcc gcgccgccgt ggaacattac aatgacgatg
    18961 tcggctttct gtttggtttt ggtaatccgt tttctaactt tggcataatc gttcagtttg
    19021 acggcggcaa ggttgggggc gaaggagacg aagccggatc ttacgccgtt tttcttcagg
    19081 atggcggttt caaacctgtt ttcgatgccc gaatatttga tgttcaattc gtcaaggttc
    19141 gccctttatg ccgtttccgc accgcaaacc gccggggtca agccctcggc gcatcctgcc
    19201 ggaacggaat ccccgtgctg ccgattgacg gttcaaaccc cgcgcccgtt tcaaataccg
    19261 gcgatgtgga cggacaggat gcgcctgacg aaaagacagc cgataccgtt tccattatcg
    19321 gcgtgggcga cattatgctc ggcagcaatt atccggtcga ttacctgccc gataccaata
    19381 ttctgaaaaa cgtcgaatct gccttgcaag acgcggacat taccgtcggc aacctcgaag
    19441 gcacgctgtt tgacgaaggc ggtacgccga aaaaatgtgc aaccccccaa aatatgctat
    19501 gcattccgaa cgccctccgc atacgggcaa taccttgccg acgcgggatt cgactacctc
    19561 agcttcgcca acaaccacag caacgacttc ggcgcgcaag gcatcacggc aacggcggcg
    19621 agcggcagct cttttacata ctcgatcgcg ctaaagccgc tgccgataac gaggccaaaa
    19681 ttgcggaaaa taccgccatc gcccagataa atttgtccat catcagacct ttactgttca
    19741 gacgagacag catttgccgc acgttttggg gcttatcttt cgatttgcgc tatgtcgcgc
    19801 accgcgcctt tgtcggcgga agtcgccatc gcgccgtaag ctcttaatgc ggcggagacg
    19861 tagcggtcgc ggtttttagg cttccatgct ttgctgccgc gcgcttccat ttcggcacgg
    19921 cgtgcggcaa gctcttcatc ggaaatggca aggtggatgc tgcggttggg gatgtcgatt
    19981 tcgacggtat cgccttcgtg taccaaaccg atcgcgccac cttccgccgc ttcgggcgag
    20041 gcgtgtccga tggacaaacc tgatgtgccg ccggagaagc gtccgtcggt taagagagcg
    20101 caggctttgc cgaggccttt agatttcagg taggaagtcg gatacagcat ttcctgcatg
    20161 cccgggccgc ctttcgggcc ttcgtagcgg atgatgacga tgtcgccggc gacgatttgg
    20221 ttgcccaaaa tgccttctac tgcgtcttct tggctttcaa acacgcgggc gcggccggtg
    20281 aatttgagga tgctctcgtc cacgcctgcg gtttttacca cgcagccgcg ctcggcgatg
    20341 ttgccgaaca agaccgccaa accgccgtct tgcgagtagg cgtgtgccac gtcgcggata
    20401 cagccttttt cgcggtcgag gtcgagggtt ttccacatac ggttttgcga gaacgcttgg
    20461 gtggtgcgta cgccgccggg cgcggctttg aagcgttcga tggcgcgggt gttttcaggg
    20521 ttggttacgt cccatttttc aatcgcgtct ttcagcgtcg gtgcgtggat agtgtgcacg
    20581 tcggtgtgca gcttgcccgc tttgtccaat tctttcagga tggcgaaaat gccgccggcg
    20641 cggtgcacgt cttccatata gtagtcgtgg ttgttgggtg cggttttgca gatgcagggc
    20701 acaacgcggc ttaagcggtc aatgtcggcc attttgaaat cgacaccggc ttcgttggca
    20761 acggccaaca ggtgcaaaat ggtattggtg ctgccgccca tcgcaatatc catcgtcata
    20821 gcgttttcaa acgctttttt ggtggcaatg ctgtgcggca gcacggtttc gtcgttttgt
    20881 tcgtaataac gtttggtgat ttcgacaatc atacgtcctg cttcgaggaa caattcttta
    20941 cggcctgcgt gggtcgccaa atacgaaccg ttgccgggta gggacagacc gagtgcttcg
    21001 gtcaggcagt tcatcgaatt tgccgtaaac atacccgaac acgaaccgca ggtcgggcag
    21061 gcgttttgtt cgacttcctc gacttgccgg ttgctgacat tgtcgtccgc cgattcgatc
    21121 atcgcgtcaa tcaagtccaa acggcgttcg ggttggatgt ttgccacgcc gataactttg
    21181 cccgcttcca tcgggccacc ggaaacgaag atggtcggga tattcaggcg catggcggca
    21241 atcagcattc ccggggtgat tttgtcgcag ttggaaatgc acaccagcgc gtcggcgcag
    21301 tgggcgttga ccatgtattc gatggagtcg gcaatcaaat cgcggctggg cagggaatac
    21361 agcatgccgc tgtgtcccat agcgatgccg tcgtcgatgg cgatggtgtt gaattctttg
    21421 gcgatggcgc cggctttttc gatttcgcgg gcaaccagct ggcccatatt gtgcaggtgg
    21481 acatgacctg gcacgaattg ggtgaacgag ttggcaacgg cgataatcgg tttgccgaag
    21541 tcggtttcca tcacgccggt ggcgcgccac aatgcgcgcg cgcccgccat attgcgaccg
    21601 tgggtggagg ttttggagcg gtagtccggc atagtgtgtt tccttgtctg ctatgccgtc
    21661 tgaacggcaa aaggctttca gacggcattt ttgttgtgtt ttgaaatgaa aaaaaaggta
    21721 ttttatacca agtatcggaa ttttgcggga ttgaaacggc gtgcggcaaa aaagaaaatc
    21781 cccgcaggaa tgcggggacg ggttcaggcg cgggcaatcg cgacggcttt ggatgcgtcc
    21841 caaaaatcaa cgggggcatt taatacgggt ttgacgatgc ccgtccgtat ggcgaaatcg
    21901 ccgaaacctt cgccgatatt gcgttctgcc gcccatttgc cgatcaggtc gtccaattcg
    21961 gcaaggattt cgggcagggt gatgttttct ttgtaaaggc gggggatgcg tacgccttca
    22021 cggtcgccgc cgatatggag gttgtagcgt ccgacggctt tgccgaccag cccgatttcc
    22081 gccaacattg cccgtccgca gccgttgggg cagccggtaa tgcgggtaac gatatagtcg
    22141 tccgacgtgc cgtgtttcgc cataatctta tccagatcgt cgatgaagtc tggcagcacg
    22201 cgttcggctt ccgccattgc caaggggcag gtcggaaagg aaacgcagga catcgcattt
    22261 tcgcgcagct tgctgacatc gttgcggatt aatccgtatg ttcgggcaag ttcttcgatt
    22321 tttgctttgt ctgcttcggc aacatttgcc acgatgaggt tttggtttgc ggtaatgcgg
    22381 aaatcgcctt tgtggatttt ggcgatttcc aacacgccgg tcagaagctg tttcccgcct
    22441 tcgtcaacca aacgcccgct ttcgatgaaa agggtcaaat gccagttgcc gtctatgcct
    22501 ttcacccagc cgatgcggtc gccgcgcccg gtaaatttga acgggcgtat gggttcgaac
    22561 ggcataccca tacggcgttc gacttccgcg cggaagttgt ccaagcccat attttgaatg
    22621 gtgtagcggg tgcgggcgtt tttgcggtcg ctgcggttgc cgaagtcgcg ctgtgtggtt
    22681 accaccgctt cggcggcctt cagcgcgtgt tccggaggta cgaaacccag ttccagtgaa
    22741 atgttcggat aggttttggt gttgccgtgt tccattgaaa gcccaccgcc tgccaaaaca
    22801 ttaaaaccgg caagctgtcc gccgccgtct gaaatggcga caaaatccaa gtcgttgccg
    22861 tagcagtcca catcatttaa gggcgggatg acgactgcgg ttttgaattt gcgcggcaga
    22921 taggttttgc ccaaaatcgg ctcgtcttct tgaaggaagt cgtcggaact ttgaactttt
    22981 ttgccgtcca cccaaacatc cagataaccg cgcgtgcgcg gcagcaagtg ttcggaaatc
    23041 tttttcgcgt attcgtaagc ctgttggtgg agtgccgact cgatgggatt ggaggtgcaa
    23101 agcacgttgc ggttcatatc cgccgccgtg gcgatggaat ccaaacccag tttgtgcaag
    23161 aggcggtgca tcgtctgcaa cttggttttc ggcacgccgt gaaattggaa ggtttgccgg
    23221 ttggtcagcc tgatggatcg gtaataactg ttttcgcggg cgaatttgtc caattctatc
    23281 cattgggacg gcttgatgat cccacccggc agccggcagc gcaaaagcat aaatttcaag
    23341 ggttcgagtt ttgcctcggc gcgttcggcg cggatatcgc ggtcatcctg ctcatacatg
    23401 ccgtggaagc ggatgagttg gaaattgtcg cccttgaagc cgcccgtgag ctggtctttc
    23461 aaatcgtcca aaatcgtgcc gcgtaaaaaa ttgctttcgg ttttcaggcg ttcgttgttg
    23521 gatagcggtt tttcttgcca ctccaaacct tttgtcttgg tctgtacggt cattttgtgt
    23581 tccttccgat ttcatttaat caataaacat cacgctgata gcgtttttct tcacgcagcg
    23641 tatttaaata ttcttctgcg tcgtcccggt ttaaatgtcc tgcttgaata atcacatcca
    23701 ataaggcggc ttcgacatct tttgccattt ttgccgcatc gccgcacaca taaacatatg
    23761 cgccctcctg caaccattgc caaagctctg ccgcctgttc gcggattttg tgctgcacat
    23821 agattttttc ttcctgatcg cgggaccagg cgaaatcgta tttatgcagg aaaccctctt
    23881 tggcaaactg ctgccattcg gtctgataga ggaagtcggc ggcaaaatgc ggattgccga
    23941 aaatcagcca gtttttgcct tccgcatttt ctgcggcacg ttgttggacg aaagcgcgga
    24001 acggtgcgac gccggtgccc gagccgatca tcacaatcgg cttgcggctg tcttcgggca
    24061 gtctgaagcc gtcgttgcgc tccacaaata cacgcaccgt gccgtcttct tcgacgcaat
    24121 cggcaagaaa accggatgcg ccgcccgttc tggcgcggcc ttcgtgttca aaacgaacca
    24181 cgccgacagt taaatgcact tcatcgccca cttccgcctg tgctgaagaa atcgaataca
    24241 aacggggtgc aagcggacgc agtaaacgga tgaattgttc tgccgtcagg cttgccggga
    24301 agcggtgcag cacatcgaca ataggcgtgt tttgcacgaa atcctgcaaa acggcgttat
    24361 cggcaatgat tttatcgagt tcttcataat gggcgaacgc ggcatagcct ttgacgaaag
    24421 ccggagtgtt ttgcgtgagt tcgaaatgag atgaaagtgc gcgcgcaacc ggcatcatct
    24481 ttccgcctgc ctgtatttcc gttgccggat cgatgccgag caggtctagg atttccccga
    24541 ccagtgccgg attgttgtca aaccaaacgc cgagcgcgtc gcctgcctga tagcttaaat
    24601 ccgaaccgct caaatcaagt tcgatgtggc gcacgtcttt atcggattgg cgggcggtga
    24661 ttttctgatt ggccagcagg gcggcgggaa aggggtctgc cttgcagtac ctgctctccg
    24721 gtaccgtctg aaggtcggcg gggggcattg cctgtggcgc gggtgttgcc cggttttttg
    24781 cggcttcttc ttttaagagt gcggcgatat tgtctgtcca ggcgtttgca gaggcggtaa
    24841 agtccaaatc cgcatcaacg cgttcgagca ggcgtttcgc ccccaattct tcaaaacgcc
    24901 ggtcgaaatc tttacctgcc tgacagaaat tcggatagga gctgtcgccc aagcccagta
    24961 cggcaaattg gagtttgtcc aatttcgggg cttttttgcc gttcagcagt ttgtgcagca
    25021 cgacggcttc ttccggcggt tcgccttcgc cctgggtgga cgtaaccagc agcaggcggc
    25081 gttcgtctgc gatgtttttc gccttgtagt ctttcagttc ggcgagcctg acttgtatgc
    25141 cggcggcttt caggctgtcc gccgctttgt cggcaacgga tttcgcattg ccggtttgcg
    25201 aggcggaaag gacggtaacg gaaaagggtt ctgccgccgg caatgctgtc tgaagcgcgg
    25261 gcagccctgc ggatgccccg tttcctgctt ttgcccaagc atagccggac agccacgccc
    25321 attgtgccgc gtccagcccc gacaggagct gcgtgatttc gggcggcaga ggcggtaatg
    25381 gcggatttgt gttctgcata tcgtgttcac tcataaaatc atacctgccg caacagtgcc
    25441 gtatgtcgat tcgtctatca ggataaacga accggcggcg gtgttttccg cataaggcgt
    25501 tgccgtaacg ggtttttgaa ggttgatgcg gactttggcg atgtcgttca tcttcaagga
    25561 ttccgcgccg gcctcttgtt ccagcgtgcg gacatccaaa acgctttcaa tttccccgac
    25621 ttttgccggc acggtttgcg tgccgtgctt gagcaggtat ttgcgcgcgg tgttgagcgg
    25681 acgttcgtca aaccagcaaa gcgtggcttc cagatgtttt tgcggggcga gcggggaatt
    25741 tttatcgaca aaaaggtcgc cgcgcgaaac atcgatgtcg cggtccagcc ggagggttgc
    25801 cgcctcgccg gcaaaagcct gcgccacttc ccctttcggc gtgatgattt cggacacttc
    25861 ggcggtcagc ccgttcggtt cgatgcggac ggtttgcccg acggcgaccg aaccgcgttc
    25921 gatgcgcccc tgatagcctc ggaaatcatc ggccttgtcg gcatcttggc ggacgaccag
    25981 ttgcacgggg aaataaaaat cgtcggcggt gcggctgact tcgtccgccc ccggcagggt
    26041 ttccaaaatg gacaataagg gttcgccttt ataccaaggc atattgccgc cggggtaaac
    26101 aatgttgtcg cccaagagtg cggacaccgg tacgaaatgc gcgtctttca aaccgagctg
    26161 ttcggcaagt cggcggtatg cctccacaat ggcgttgaat ttgtcttcgc tgtaatccag
    26221 caggtccatt ttgttgaccg ccaccacaat atgcgggcag ttgagttggc ggaggatggc
    26281 ggaatggcgt ttggtctgcg gcagaagctg taagggctgc gcgccgaaat ccagttggga
    26341 tgcgtcaacc agtacgactg ccgccgaagc ggtgcttgcg cccgtaacca tattgcgcgt
    26401 gtattgttcg tgccccggcg tgtcggcgat gatgaatttc cgtttcgccg tggaaaaata
    26461 gcggtatgcc acatcgatcg taatgccctg ttcgcgttcg gcttccagtc cgtcggtcag
    26521 gatggagaag tctatggttt ctttcaaacc tttgcttttg ccggattcca aggttttgat
    26581 ttggtcggac agcagggctt tgctgtcgta gagcagccgt ccgatcaggg tgcttttgcc
    26641 gtcatcgacg ctgccggcgg taatgaagcg gagcggggcc tggtgttgtg ccgtcatatt
    26701 ttcttcctca tatctgctta aagggttttt gaaatttaga aatagccttc ttttttgcgt
    26761 ttttccattg ccgcctcgct tgcctgatcg tccagccggg tcgcgctgcg ttcggaaatg
    26821 tcggcaaccg ctgtttctct gataatctcc gtcggcgtgg acgcggtgct ttctaccggg
    26881 caggtgcagc tgatgtcgcc gacggtgcgg aagcggacat caaggatttc ggaggtttca
    26941 gacggcattt tcggggtgag cggcgttacg gggaccagca gccccctgcg tctgaccact
    27001 tcgcgcctgt ggctgtaata aatcggcggc agctcgaggt tttcgcgggc gatgtattgc
    27061 cagatgtcga gttccgtcca gttggaaatc gggaagacgc gcatattttc gcctttgtgc
    27121 agcctggtgt tgtacagcga ccacagctcg gggcgttgcg ccttcggatc ccattgtccg
    27181 aactcgtcgc ggaacgagaa aatccgttct ttggcgcggg ctttttcttc gtcgcgccgc
    27241 gcgccgccca tcagcgcgtc aaagccgttt gcctcgatgg tttccaacag cgtaaccgcc
    27301 tgcgccgcat tgcgcgaatc agtttctttg cgtaaaacta ctgtgccttt ggcaatggag
    27361 tcttccacgc gccccactat caggcgggca ttgagttttg ccgcctgcgc gtcgcggaag
    27421 gcaatcactt cggggtagtt gtgccccgtg tcgatatgca ccagcgggaa gggcagtttt
    27481 accggcctgc tgcccagctg gaaggctttg caggcgaggg cgagcaggac cacggaatct
    27541 ttgccgccgg aaaagagcag ggcggggttt tcgcattctg ccgccacttc gcggataatg
    27601 tggatggatt cggattccaa ccagtcgagt tgggcgttgt tcggttcggt tttcgtcata
    27661 ccatattcct tatttcttct gtctgatatt tatgaattat ttgtgcagcc cgcattcttt
    27721 gctgtttctg ccttcccacc accaccgccc ggcgcggatg tcttcgcccg ccttgacggg
    27781 gcgggtgcag gggtcgcagc ctatgctggg aaatccttgc cggtacaaat cgttgtaagg
    27841 cacattgttg gcgaggatgt atgcccacac gtcgtgttcc gaccagtcga aaatcgggtt
    27901 gtatttgccg atgtcccgtc cggcatcgta ttcggcaaac ggcagttccg tgcgtgtggc
    27961 ggactgttcg cggcgttgcc cggtaagcca ggcgtccgcg cctgcaatgg cgcggttgag
    28021 cggttcgatt tttcggatgc ggcagcattc gcggcgcgct tcaacgctgt cgtaaaaggc
    28081 aaacctgcct ttgctttcca cataacggtc ggcatcttct cgaaccggcc ggaaacgctt
    28141 tatccgcaaa tggggatatg cgcgtccgag tctgtccagc aggtttaggg tttccgtgtg
    28201 gagcagcccc gtatccaagg taaaaatgcc gatattgagg ttttcgccgg cgataaggtc
    28261 ggtaatcacc atatcttctg ccgcaaggct gctggcaaac cgtgcatccc ggtggctgcc
    28321 gacaatccgg tgcaggcgtt gtttgagggt ttccgttttt tccgcaaggg cggtttcgcc
    28381 gccggatccg atatgcggta tctgccacag ggcgggtttg aacagtgtcg tttccatttt
    28441 tcccgcctta tgccgcccgt tgtccggcat tcagtccgcc caatgcggga tacgtctgcc
    28501 cgacccggtt ttctccttcg ccgttttcac cgaaccaggc gagtttttcg tgcagcccca
    28561 ccacttcgcc tatgacaatc aatgccggat tcggcgcggt ttcggcgagt tcggcaaggt
    28621 tggcgagcgt gccggttgcg gttttttgag ccggcagcgt gccttggctg atgacggctg
    28681 ctggcgtgtc gggcgagcgt ccgtgctgtt gcagccgttc ggcaatcagg gcggctttga
    28741 gcgcacccat ataaatcacc aaggtctggc ggctgcgggc gagggtctgc cattcgatgt
    28801 cgggcgcatc cgccttgcgg tggccggtta cgaaaaccgc actttgggca taatcgcggt
    28861 gcgtgagcgg gatgccggca taggcggtcg cgccgacggc ggcggtaatg ccggggacga
    28921 ccgaaaacgg gatctgatgg cgtgccaagg tttccaattc ttcgccgccg cgtccgaaca
    28981 cgaaagggtc tccgcctttc aaacgcacca cgcgcctgcc ttcgcgggcc agcctgacca
    29041 taagcgcatt ggtgtcctct tgcggggtgc ggtcgccccg ggcgcgcttg ccgacaaaaa
    29101 tccgttccgc atcgcggcgg acgagggaca gtatgccgtc tgaaaccagc gcgtcgtaaa
    29161 gcaccacgtc tgcctgctgg atttcctgca gccctttgag cgtcagcagc cccgcatcgc
    29221 cgggacccgc gccgaccagc gagacggagc cgccttgatc attttgacga ctttgttcca
    29281 attggcctgc caattcccgt tcggcaaggg tgttttgccg gtttttgacg agggcggcga
    29341 aacgtccgtt aaactgcttt tcccaaaagc ggcggcgttc ggtaacggat ttcagtttgc
    29401 ccttgacggc atcgcgccac cttcctgaaa tttccgccat atcgcccaaa gacggcggca
    29461 gcagggcttc cagcctttca cgcagcagtc gggcgaggac gggcgcgctg ccggagctgg
    29521 aaacggcaat ctgaaccggg ttgcggtcga taaccgacgg gaagatgaag ctgcaatggt
    29581 cgcggtcgtc caccacgttg accggctttt ggcagctttc ggcaagatgg aaaacgcgcc
    29641 ggttgagggc ttggtcgctg cttgccgcaa tgatgaggaa aaccgtgcgg atgtgttcgg
    29701 cacgaaattc ttcggcaagc cacaggattt tgttttccgc cgccaacgcg gagagttcgg
    29761 cattcaggtg ttttgcggca accctgacct ctgcgcccgc cttcagcagc aggctgattt
    29821 tgcgtgcggc gaccgcgccg ccgcctacga ccaatacggg gcggccggcg aggttggcga
    29881 aaatagggaa ataattcact ggctgactcc tttgctgttt gcccgcacct tgtttccgat
    29941 acggtgcgtc gcggcatttt tgtcggaatg cgggtcattt tagacaaaag gattttcccg
    30001 gttaaataat aaaaaggcat ttgttagaag ctgaaagcta tatgagggcg gctgcggata
    30061 cggcggttt
//
LOCUS       DAWKOX010000004        28007 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.004, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000004 DAWKOX010000000
VERSION     DAWKOX010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28007
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.004"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(306..1034)
                     /gene="rmpM"
                     /locus_tag="WJK78_000118"
     CDS             complement(306..1034)
                     /gene="rmpM"
                     /locus_tag="WJK78_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ7597102.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1398..2348
                     /locus_tag="WJK78_000119"
     CDS             1398..2348
                     /locus_tag="WJK78_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ7597103.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2461..3195)
                     /gene="fnr"
                     /locus_tag="WJK78_000120"
     CDS             complement(2461..3195)
                     /gene="fnr"
                     /locus_tag="WJK78_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ7597104.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3400..4821
                     /gene="hemN"
                     /locus_tag="WJK78_000121"
     CDS             3400..4821
                     /gene="hemN"
                     /locus_tag="WJK78_000121"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ7597105.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(5174..6748)
                     /locus_tag="WJK78_000122"
     CDS             complement(5174..6748)
                     /locus_tag="WJK78_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ7597106.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            7073..8173
                     /locus_tag="WJK78_000123"
     CDS             7073..8173
                     /locus_tag="WJK78_000123"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ7597107.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGTDELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAELTQIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDKE
                     TRAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFARPHPKSTGRELFALNWLETYLGGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAANARQMYICGGGIRNPVLMADLAECFGTRVSLHSTADLNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            8292..9233
                     /gene="mafA"
                     /locus_tag="WJK78_000124"
     CDS             8292..9233
                     /gene="mafA"
                     /locus_tag="WJK78_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ7597108.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNGMGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWTGPYKVSKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            9237..10505
                     /gene="mafB"
                     /locus_tag="WJK78_000125"
     CDS             9237..10505
                     /gene="mafB"
                     /locus_tag="WJK78_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ7597109.1"
                     /translation="MKPLRRLTNLLAACAVAVAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVETLVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            10508..10825
                     /locus_tag="WJK78_000126"
     CDS             10508..10825
                     /locus_tag="WJK78_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597110.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            10959..11588
                     /locus_tag="WJK78_000127"
     CDS             10959..11588
                     /locus_tag="WJK78_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ7597111.1"
                     /translation="MVKTADGYKAIARIRTGDRVFSKDEASGKTGYKPVTARYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSGGKWIKAEDLKAGSRLLSESGKTQTVRNIVV
                     KPTPLKAYNLTVADWHTYFVKGSQAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESRIAELKNKIIPGMPKNERLKIEKTIKNITKNANRKAKGEEHGRRGR"
     gene            11569..12024
                     /locus_tag="WJK78_000128"
     CDS             11569..12024
                     /locus_tag="WJK78_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597112.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILGTFMYEPPDEF
                     RTEYYESPDSNLLIAVKKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            12245..12604
                     /locus_tag="WJK78_000129"
     CDS             12245..12604
                     /locus_tag="WJK78_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597113.1"
                     /translation="MASYVSIKGWIECSDDDIKIIQENINNFWNNCPFNIEEKESAKI
                     YKSGWVFPTNSFNWSSYIFFGACVKSYFIIYFEKCIKTIMELDIEISGFFELDYYEDS
                     YKVHWKINNGNLIQTTN"
     gene            12819..13589
                     /locus_tag="WJK78_000130"
     CDS             12819..13589
                     /locus_tag="WJK78_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ7597114.1"
                     /translation="MVKTADGYKAIARIRVGDRVFAKDEASGKTGYKPVTTRYGNPYQ
                     ETVYIEISDGIGNNQTLISNSIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDRAETEGVWVHNDCPYGSSSAKGKSGSERNTAKRGT
                     FRQETLKNAWDLAADGSQPNSKKCPTCGKDVYGNPHNKEKRNTKDGWDGSHNPSWSNR
                     QHSSDRKEQLNDYNKGVSLECRHCNRSGGNKDERFKKK"
     gene            13586..14131
                     /locus_tag="WJK78_000131"
     CDS             13586..14131
                     /locus_tag="WJK78_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ7597115.1"
                     /translation="MITVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGGHYNTVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDSEVGNLSDMNRKPFVW"
     gene            14296..14970
                     /locus_tag="WJK78_000132"
     CDS             14296..14970
                     /locus_tag="WJK78_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pretoxin"
                     /protein_id="HEZ7597116.1"
                     /translation="MAHIQAGDRVLSKDEASGETGYKPVTTRYGNPYRETVYIKVSDG
                     IGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITFKQQPLKAYNL
                     TVADWHTYFVKGDKAETEGVWVHNDCPYGNLSDNKSVGEGKKFTPAQKKAIIQENMNR
                     NGGVVKSDQSGEVLVRPKKSQKGITPPSNEWQIDHVQAKSKGGSNSYKNAQVLSRREN
                     IKKSNK"
     gene            15416..15646
                     /locus_tag="WJK78_000133"
     CDS             15416..15646
                     /locus_tag="WJK78_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ7597117.1"
                     /translation="METLDERIKNLGKSLEDRIDANLIDATLEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
     gene            16066..16467
                     /locus_tag="WJK78_000134"
     CDS             16066..16467
                     /locus_tag="WJK78_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597118.1"
                     /translation="MKIKPLQFSNNNHRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFDF
                     FEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
     gene            16634..17128
                     /locus_tag="WJK78_000135"
     CDS             16634..17128
                     /locus_tag="WJK78_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597119.1"
                     /translation="MENRFAKIVKDIFSFTQFVSEAENKIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCDISHFLHFADWA
                     EADIPNQSRLYAEYWWEMEMFKMSVLEDWEHSGKPLDWKKWQRQYRSEAFELVKKLNR
                     SKQE"
     gene            17248..18381
                     /locus_tag="WJK78_000136"
     CDS             17248..18381
                     /locus_tag="WJK78_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597120.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGKEVWLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     VREEKQGDRLPDFPLNLEDLDKEVRRYAEAAARRSGGRRDLSH"
     gene            complement(18468..18743)
                     /locus_tag="WJK78_000137"
     CDS             complement(18468..18743)
                     /locus_tag="WJK78_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597121.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKARLMCISVFWIVVFNL"
     gene            complement(18760..19527)
                     /locus_tag="WJK78_000138"
     CDS             complement(18760..19527)
                     /locus_tag="WJK78_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ7597122.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEQTSFNNPEPMTGFE
                     HTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINLIEISVYYKKTDQGW
                     VLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPE
                     YEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNYHRYGENDYSTSVGSCINGFTVR
                     YYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNPSKK"
     gene            complement(19913..20188)
                     /locus_tag="WJK78_000139"
     CDS             complement(19913..20188)
                     /locus_tag="WJK78_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ7597123.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALKQEIAVKKLTAAQKRKLWEQAEKMPSET"
     gene            complement(20185..21468)
                     /locus_tag="WJK78_000140"
     CDS             complement(20185..21468)
                     /locus_tag="WJK78_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7597124.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFASGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWPEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGPFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(21624..23042)
                     /gene="glnA"
                     /locus_tag="WJK78_000141"
     CDS             complement(21624..23042)
                     /gene="glnA"
                     /locus_tag="WJK78_000141"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ7597125.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGETAYFGPEPEFFVFDGIEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPTVKGGYAPVAPIDCGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            23126..23275
                     /locus_tag="WJK78_000142"
     CDS             23126..23275
                     /locus_tag="WJK78_000142"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597126.1"
                     /translation="MPSETRPASNFKLENIVSDGKIVNNMLRFVCSKAEYPPFCPNAD
                     KTDAA"
     gene            23353..24162
                     /gene="aroE"
                     /locus_tag="WJK78_000143"
     CDS             23353..24162
                     /gene="aroE"
                     /locus_tag="WJK78_000143"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ7597127.1"
                     /translation="MHALPRYAVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIFLKNGKLRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTHAKA
                     EELARLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVNREIFRNCRLAYDMVYGDA
                     AQAFLNFAQSNGAAEVSDGLGMLVGQAAASYHIWRGFTPDIRPIIEYMKAL"
     gene            24165..24866
                     /gene="mtgA"
                     /locus_tag="WJK78_000144"
     CDS             24165..24866
                     /gene="mtgA"
                     /locus_tag="WJK78_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ7597128.1"
                     /translation="MFRIIKWLIALPVGIFIFFNAYVYGNIITYRAVAPHQTAFMSMR
                     MKQFEQEGRDVALDYRWMPYNRISVNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTACVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(25191..25266)
                     /locus_tag="WJK78_000145"
     tRNA            complement(25191..25266)
                     /locus_tag="WJK78_000145"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(25231..25233),aa:Phe,seq:gaa)
     gene            complement(25457..26191)
                     /gene="lptB"
                     /locus_tag="WJK78_000146"
     CDS             complement(25457..26191)
                     /gene="lptB"
                     /locus_tag="WJK78_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ7597129.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVTLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(26265..26795)
                     /gene="lptA"
                     /locus_tag="WJK78_000147"
     CDS             complement(26265..26795)
                     /gene="lptA"
                     /locus_tag="WJK78_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ7597130.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(26776..27357)
                     /gene="lptC"
                     /locus_tag="WJK78_000148"
     CDS             complement(26776..27357)
                     /gene="lptC"
                     /locus_tag="WJK78_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ7597131.1"
                     /translation="MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSSKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(27354..27890)
                     /locus_tag="WJK78_000149"
     CDS             complement(27354..27890)
                     /locus_tag="WJK78_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7597132.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
BASE COUNT         7665 a         7033 c         6631 g         6678 t
ORIGIN      
        1 gcggcaatgg gacacaaacc tgaatctgaa tctgaatctg aatctgaatc tgaatctgaa
       61 tctgaatctg aatccgaatc cgaatccgaa tccgaatccg aatccgaatc cgaatccgaa
      121 tccgaatccg aacctgcacc ccgattctga cgatagccgt ttcagaaaac cacccaaaaa
      181 aacaaacccc gcaaaagcgg gggtttgttt cacatcatcg atgccgaccg acgtttcacg
      241 aatattgcaa cagtacctgg tacaaaatcc actaacctca tgcatcggca agatattgcc
      301 tagccttagt gttggtgatg attgtgtgcc ggcacaacct gacgggttac gatgctgcgg
      361 attttcacat ccacacggcg gtcaggttcg atacatgcaa tcagagcctc acgttttttg
      421 gctttagaga ctttcgcacc cagtttggca acttcggctt cacaaacttg agtcatttgc
      481 gcttgagatt cgcccaagcc aacagcagaa attctagaaa caggtacgcc gttgctgacc
      541 aggttgtttg ccactacgta tgcgcggcgt tcggacaggg cctgattgta tttgtcagaa
      601 cccataaagt cggtatggcc ttcgacgcgg acagattgga cattggttcg actcaggcgt
      661 tgcgccaata ctttcaggtt gtcttgagct tcggcgcgca atgaatcctt atcgaaaccg
      721 aacagggttt tggcagacag ggaaatggtt tcatcaacat attgcggagc ctgctccaca
      781 acgacgacag gcgcgggtgc gggttcgggt tctggctcgg gttcgggggc agcaaccgca
      841 tcgccgcatt ctacgcgacc ttggcttgct ttatcaaagt aggcgttttt ccagcattcg
      901 ccatagttgt tgcgtacgat ttcgttcgac tggccgctta cggtgtaacc ctgaacggac
      961 gcctcgcccg caacagcagt gccggaagcg agcaatgcaa cgaataatgc gcttaatttc
     1021 agctgtttgg tcattttatt ccctcattaa atttgtacag cagatacaga agcaactgct
     1081 gaattgccaa catacaggcc gctgtagaaa catggcggca aatcggatat ttcagtctcc
     1141 actataaaga agcaggggga ggactgtcaa tactcaacgc ctgaaaacaa ccgtaaaaca
     1201 gcctgtttcc tgatagtcta tcatgccgaa aaatcaattc cgtgtcatta ctttaggggg
     1261 attttttcca tatcgcacga ttgccgttgc acaaaaacaa caaacacaac ggcaaagccc
     1321 cataccgtac cggcaagaaa atatgataaa ttataaacaa tgttcagcca cccgacacag
     1381 acccacaccg acccgccatg aaattacaac aattgaaata cgccttagaa gtttaccagc
     1441 acaacctgaa cgtttccgaa gcggccgaag ccttgtttac ttcgcaaccc ggcatctcca
     1501 aacaaatcaa attgctggaa gaagaaatcg gcattcagat ttttatccgc agcggcaagc
     1561 gcgtggtttc ggtctcgcag ccgggcaagg tggttttgga tattgcggaa cgtattttac
     1621 gcgatgtaca gaacattaaa aatatcggca gcgagtttac cggacaggac agcggttcgc
     1681 tgacggttgc cacgacgcat actcaggcac gctatgccct acccttgatt gttgccgatt
     1741 ttgtgaaacg ctatccgaaa gtcaacctga ccatcaaaca ggggagccct gccgccatcg
     1801 cacgtatggt tacctcaggc gaggcggact tggcgattgt tacggaacgg atagacgacc
     1861 atcccgaact gggaaaactt ccctgctatg actggactca tgcggttatc gtaccgaacg
     1921 accacccctt gctcgaatgc agaaaccccc tccgcattga agatttggcg aggtttccgc
     1981 tgattactta tgaatttgca ttcaatgcgg gcagcagcat cgcgcgggca ttttccaaag
     2041 cccgtttgga acagccggat gtcgcattgg cggcggcgga tacggacgta ttgaagactt
     2101 atgtgcgctt gggtttgggc gtgggactga tggcgaaaat ggcgtacaac ccggatacgg
     2161 acggcgattt gcagcttgtg gatgcggcac acctgttcga gccgtcgccg acgtggattg
     2221 ctttgcgcag cgatacttat ttgcgcggat atgcctacga ctttatccaa gcgtttgcgc
     2281 cgcacctgac acgcgagaag gtggatagga ttctgtacac gcccatcagc gaggattttt
     2341 cgatttaggc ggctgccggt tttcagacgg cactttgcgg cagatacaac aaacaggaca
     2401 gatgttttcg tctgccctgt gtttattgag aatgctgtct gaaatgttcg tacgggttaa
     2461 tcaaatggcg tgcgagcagc cggacaccat ttttttcaac acctgcagat tgaggatttt
     2521 gatgtgctta tgctcgacgg aaatcaatcc ttcctgatgg aacttggata atgtgcggct
     2581 gacggtttca agtttcagcc cgagataact gccgatttct tcacgagaca tgcgcaggat
     2641 gaaatcgttg gcagcaaaac cacgggaata aaggcgttgg gagaggttca gcaggaaggc
     2701 ggcaatccgc tcttcggcgc gcatattgcc caacagcagc ataacacctt ggtcgcgcac
     2761 gatttcacgg ctcatcatgc ggaagaagtg cgtacgcagg ctggggatgt tttgccccag
     2821 ttcttcgatg tgggtaaacg gcagttcgca cacttcgctg tcttccaagg cgaccgcgtc
     2881 gcaactgtgc acatgggaac agatgccgtc catgccgatg agttcgcccg acataaagaa
     2941 acccgttacc tgatcgcggc cgtcctgact ggcgacggtt gttttgaaga agcccgaacg
     3001 gatggcaaag agcgaggtaa aggcttcgcc gacacagaac aggtattcgc cctttttcag
     3061 gcggcggctt tgacggatga cggcatcgag ttggctgagc tcgttgggca gcagcccgac
     3121 aggcaggcag agttcccgca aagaacagga agaacacagc gttttcatct gatgtgtagt
     3181 attatgcgaa gccataccgt acctttttgt gcgctttgcc ccatcatgat tatagtggat
     3241 taaatttaaa ccagtacggc gttgcctcgc cttgtcctta tttaaattta atccactata
     3301 tgtgcttatt gacacatatc aagacaggtt tatcatactg tggcattcta ccaaactatc
     3361 caaaatttga ctaacatcat aaaatcgcac acacacacca tgaaaatcat tcagatacag
     3421 aacaatcaca atgtaaacga tgaccgcccc gagtttgacc gcgcgctgat tgccagcctg
     3481 cccgccagcg gcccgcgcta cacttcctac cctaccgccg accgtttcca tgacggtttc
     3541 cgcgaaggcg aatatatcaa agctttacat ttgcgcggta tgggcgcgtt aaacaaaccg
     3601 ctttcccttt acattcacat tccgttctgc aacaccatct gctactactg cggctgcaac
     3661 aaaatcatca ccaaagacaa aagccgcgcc gatgcctaca tcgaatatct tgaaaaagaa
     3721 atggaactgc tcgctccaca tctgaacgga cggcaccagc ttgcccaact gcacttcggc
     3781 ggcggcacgc cgaccttttt gagcgacgaa cagatcgaac gtgtcttccg catgatacgc
     3841 aaacatttcg agttaatccc caccggcgaa tactccatcg aaatcgaccc gcgcaaagtc
     3901 agccgcgaca ccgtcctcat gctcggcaga ctcggcttca accgcatgag catcggcatt
     3961 caggatttcg accccaaagt gcaggcggcg gtcaaccgca tccaaagtta cgaagaaacc
     4021 aaagaagtca tcgatgcggc gcgcgaagcg gggttcaaat ccgtcagcgt cgatttgatt
     4081 tacggcctgc cgcaccagac ttcggaaagc atcaaaacca ccatcgatac cgttttgtcg
     4141 ctcgatcccg accgcctcgc cctttatcac tacgcccacc tgccgcacgt gttcaaaccg
     4201 caacgccgca tcgataccgc cgccgttccc gacagcgaag agaagctcga tatgctgcaa
     4261 tactgcgtcc aaaccctaac cgaacgcggc tacgtcttca tcggcatgga tcatttcgcc
     4321 aaacctgacg acgaactctc catcgccctc aaagaaggct tcctccagcg caacttccaa
     4381 ggctattcga cctacgcgga ttgcgatttg gtcgccatcg gcgtgtcgtc catcggcaaa
     4441 atcggcagca cctattccca aaacgaacgc gacatcgatg cctactatgc cgccatcgac
     4501 gaaggcagac tgcccatcat gcgcggttat cagctcaatc aggacgacat cctgcgccgc
     4561 aacatcattc aggatttgat gtgccgtttc gcgctcgact accggattta cgaaagtatg
     4621 ttcggcatcc cgttcgaccg ctacttcaaa gacgaactgg cggatttgga aaaactcgcc
     4681 ggtttgggat tggtgcgcct gaacagccac gggctgaccg ttaccccgaa aggacgcttc
     4741 ctcatccgca acatcgccat ggtgttcgat taccacctgc gccataaaga aaccaaggcg
     4801 aaatattcgc aaacggtgtg attgcgtcta acgtacaaat gccgtctgaa aggctttttc
     4861 agacggcatt ttgctgccgg caggataagt gttttcaaga acaggcggcg gcatatcata
     4921 acgttccgca cctttgtgtc cgaccgttcc gaaaccaaga tatagtggat taacaaaaac
     4981 cagtacagcg ttgcctcgcc ttgccgtact agctgtactg tctgcggctt cgtcgccttg
     5041 tcctgatttt tgttaatcac tataccaaac ggcatatccc gacagaacag attgtgcata
     5101 aggcacaagc ccgcacattc catcaacaaa atgccgtctg aacacgggtt cagacggcat
     5161 cagtatttta caatcagaat actgcctgta aaaccaagta gcagacaacc gacaatacgg
     5221 cggcggcagg cagggtaatg acccacgcca aaccgatggg cttcatcagt ttccagttgg
     5281 cattgcggtt gaccagaccg atgccgagta ccgcgccgac caagatatgc gtactggaca
     5341 cgggcagccc catcagcgac gcgcccatca cgacggatgc ggcggacaat tcggcggtaa
     5401 aacccgaggc ggggtgcatt tcggccaaac tcgtaccgac ggttttaatc acctctttac
     5461 cgacaaacca caaaccgaca atcagcgcga tgccgaaagt cagcatcgca atcgggggga
     5521 cgacattttg cgcggcaacg ctgttggtac gcaaaacatc cataatcgcg gcaaacggac
     5581 cgatggcgtt ggcgatatcg ttcgcaccgt ggctgaatgc gaagccgcag gcggtaaaga
     5641 cctgcatcca tgaaaacatc tgaaaggtcg atttgcccaa gtctttacgc ttgaggcttt
     5701 tggcaaacac aaacgtcccc atccacaccg ccgcgcctat cataaagatg gtcaggaagc
     5761 tgttgacgtt gctcatcccc aaatgcaggt ttttcaagcc cttgaaaatc agcatagcgg
     5821 aaatcatcat cgcgccgaac gaagcgataa agggaatcca agaatgcagc gctttgtagg
     5881 aatcgacatt gtttttacgg ttgtcgaacg cataaagacc gcggtaatac tccgattgca
     5941 gctcttgcgg atcgaattcg ggttcgtcgt aaatttgcgc gtcgtgcgcc attttggtgg
     6001 cgtactcgac tttttcggct tcggacaaac cctcgaaaaa caggcggtgc cgttctttat
     6061 aggccttttt ttcctgcttg atgcccttga gcgtgccttc cgcccaagcg ttgtaatcta
     6121 agacgttttt cttgacgcgc gaaaacagga aataggacac cgcgccgccc aacacgggcg
     6181 acaataccca agaaacacca ataccgccca gcttgcccca acgtatcaaa tcgcccgatg
     6241 cggcatcgtt cattaccgcc atacataccg cgctgccgac aatgccgccg ataatggaat
     6301 gggtggtaga taccggaagc ccttttttcg aggcaaacaa cagccacaac gccgccgcca
     6361 aaagcgcgga catcataata aacacaaact gtatgggttc gaaatcaaca cccttcaaat
     6421 cgacgatgcc tttgcgtatg gtattggtta cctcgccgcc cgcgatgacc gcgccgctga
     6481 cctcaaatac cgccgcaatc agcaaagcct gcgggatggt cagcgtaccc gcaccgacgc
     6541 tggtgccgaa agaattggca acatcgttgc cgccgatgtt gaacgccata aacacgccga
     6601 acatcgtggc aataatgaat aaggcggcgt aattgtaatg ggtataaccc aagccccaat
     6661 aaataaaata gccgactgta cctaccagca tggcggcaaa gacggcgttg atggttttaa
     6721 catttgcgct catttggatt tgagccatgg caatcttcct ttaatgtggt ggaaatcatg
     6781 agtgttgccg acactgtact gctgcctccg gtcgaactgc cgtttcggga tatggcagac
     6841 gcatccttcc ttctgaaccg catccgaata cccccaaacc tgaccgaatg caaaactgct
     6901 gccggaaacg gtttgtatga cacttctact actggatgtt gcgggcgcat tataatattt
     6961 ttccatccgt cttgaaacat ttatttacac tttatttaca ctgcggcggc aaatcggtat
     7021 acgagcgtca atacacgtta aaatggcgtt ttgcaccagt ttgggagtga tgatggaaac
     7081 acagctttac atcggcatca tgtcgggaac cagtatggat ggggcggatg ccgtgctggt
     7141 acggatggac ggcggcaaat ggctgggcgc ggaagggcac gcctttaccc cctatcccga
     7201 caggctgcgc cgccaattgc tggatttgca ggacacaggc acagacgaac tgcaccgcag
     7261 caggattttg tcgcaagaac tcagccgcct atatgcgcaa accgccgccg aactgctgtg
     7321 cagtcaaaac ctcgcgccgt ccgacattac cgccctcggc tgccacgggc aaaccgtccg
     7381 acatgcaccg gaacacggtt acagcataca gcttgccgat ttgccgctgc tggcggaact
     7441 gactcagatt tttaccgtcg gcgacttccg cagccgcgac cttgcggccg gcggacaagg
     7501 tgcgccgctc gtccccgcct ttcacaaagc cctgttccgc gatgacaaag aaacacgcgc
     7561 ggtactgaac atcggcggga ttgccaacat cagcgtactc ccctccgacg cacccgcctt
     7621 cggcttcgac acagggccgg gcaatatgct gatggacgcg tggacgcagg cacactggca
     7681 gcttccttac gacaaaaacg gtgcaaaggc ggcacaaggc aacatattgc cgcaactgct
     7741 cgacaggctg ctcgcccacc cgtatttcgc acgaccccac cccaaaagca cggggcgcga
     7801 actgtttgcc ctaaattggc tcgaaaccta ccttggcggc ggcgaaaacc gatacgacgt
     7861 attgcggacg ctttcccgtt ttaccgcgca aaccgttttc gacgccgtct cacacgcagc
     7921 ggcaaatgcc cgtcaaatgt acatttgcgg cggcggtatc cgcaatcctg ttttaatggc
     7981 ggatttggcg gaatgtttcg gcacacgcgt ttccctgcac agcaccgccg acctgaacct
     8041 cgatccgcaa tgggtggaag ccgccgcatt tgcgtggttg gcggcgtgtt ggattaatcg
     8101 cattcccggt agtccgcaca aagcaaccgg cgcatccaaa ccgtgtattc tgggcgcggg
     8161 atattattat tgagcgcaaa taccgtctga aagccatttc cgccgctcag acggcatttt
     8221 ttcctctttc gtttacaaac ccttaaaatc catttacact caaactcgtt caaaacaaaa
     8281 caaaccctgc catgaaaacc ctgctcctcc tcatccccct cgtcctaacc gcctgcggca
     8341 cactgaccgg catacccgcc cacggcggcg gcaaacgctt tgccgtcgaa caagaactcg
     8401 tcgccgcatc gtcccgcgcc gccgtcaaag aaatggattt gtccgccctg aaaggacgca
     8461 aagccgccct ttacgtctcc gttatgggcg accaaggttc gggcaacata agcggcggac
     8521 gctactctat cgacgcactg atacgcggtg gctaccacaa caaccccgaa agtgccaccc
     8581 aatacagcta ccccgcctac gacactaccg ccaccaccaa atccgacgcg ctctccagcg
     8641 taaccacttc cacatcgctt ttgaacgccc ccgccgccgc cctgactaga aacagcggac
     8701 gcaaaggcga acgctccgcc ggactgtccg tcaacggcat gggcgactac cgcaacgaaa
     8761 ccctgctcgc caacccccgc gacgtttcct tcctgaccaa cctcatccaa accgtcttct
     8821 acctgcgcgg catcgaagtc gtaccgcccg aatacgccga caccgacgta ttcgtaaccg
     8881 tcgacgtatt cggcaccgtc cgcagccgta ccgaactgca cctctacaac gccgaaaccc
     8941 ttaaagccca aaccaagctc gaatatttcg ccgtcgaccg cgacagccgg aaactgctga
     9001 ttgcccctaa aaccgccgcc tacgaatccc aataccaaga acaatacgcc ctttggaccg
     9061 gcccttacaa agtcagcaaa accgtcaaag cctcagaccg cctgatggtc gatttctccg
     9121 acatcacccc ctacggcgac acaaccgccc aaaaccgtcc cgacttcaaa caaaacaacg
     9181 gtaaaaaccc cgatgtcggc aacgaagtca tccgccgccg caaaggagga taaaccgtga
     9241 aaccgctgcg cagactgaca aacctccttg ccgcctgcgc cgtagcggtc gccgccttcg
     9301 gacagcccgc cctcgcggcg gacttggcgc aagacccgtt cattaccgat aacgcccaac
     9361 ggcagcacta cgaacccggc ggcaaatacc acctcttcgg cgacccgcgc ggcagcgttt
     9421 ccgaccgcac cggcaaaatc aacgtcatcc aagactatac ccaccagatg ggcaacctgc
     9481 tcatccaaca ggcaaacatc aacggcacaa tcggctacca cacccgcttt tccggacacg
     9541 gacacgaaga acacgccccc ttcgacaacc acgccgccga cagcgcaagc aaagaacaag
     9601 gcaacgttga cgaaggcttt accgtgtacc ggctcaactg ggaaggacac gagcaccatc
     9661 ccgccgatgc ctacgacggc ccgaagggcg gcaattaccc caaacctacg ggcgcacgcg
     9721 acgaatacac ctatcacgtc aacggcacag cacgcagcat caaactcaat ccgaccgaca
     9781 cccgcagcat ccggcaacgc atatccgaca actacaacaa cctcggcagc aatttctccg
     9841 accgcgccga tgaagccaac agaaaaatgt tcgagcacaa tgccaagctc gaccgctggg
     9901 gcaacagcat ggagtttatc aacggcgtcg ccgccggcgc gcttaacccc tttatcagcg
     9961 cgggcgaagc cgttgaccag tggatgcagg aaaaccccaa tgccgccgaa accgtcgaaa
    10021 ccctggtcaa cgtcctgccg tttgccaaag tcaaaaacct gacaaaggcg gcaaaaccgg
    10081 ggaaggctgc ggttagtggg gatttctcag actcctacaa gcataacact gcttcaagat
    10141 tatctcagtc tgtagatgga gaaatgtttc aaacccgcaa tgttgatttt aaagcaaaat
    10201 ctattgggac taaaattcat gatggagctc aagggaaaca tatttcagga catagaaact
    10261 acattgaagg taagagtact ttaaatcaaa acattaatcc tcaagaattg ttgaacggaa
    10321 tacattcagg tgcttatcca gttatttcta aaggagcaag aggaaatcct gttgttgatt
    10381 ttgggtatcc tataggcagc gatgggaaat caggattaag taccaatttt ggtacgattc
    10441 attcaggtaa aaatggagtt cacattgttc cggctaaccc taaaaccatt aaaaaggtgc
    10501 aatagttatg aatatattac caagctggct gcgagtcggt atgaatatag caatgctggg
    10561 catgatacac tcagatatca ggttaattac cgtagattac gaggaaggaa gaaggttttt
    10621 aaaaatcaaa aattatttat caagagaagc catcacagaa gaccatgaag atatggaata
    10681 tttgattaca gagttatggt ctatgtgtgg agaatatttt gatgaagctg actttgaatg
    10741 tatttattct aatcattctt ctatggagtt aaaccaaata aatggtgcag tattcaggag
    10801 aaaggaatta atttcgcaag cgtaggttaa aaaaccaaca atcacaatgt cttctgaaac
    10861 cgtgtttaat tttcagacgg catttccttc atttgaaata ggatattgag aactgagttc
    10921 ttcaaaaatc ctacacctgc tccttccacg gcagcacctt ggtcaaaacg gcagacggct
    10981 acaaagccat tgcccgtatc cgaaccggcg accgcgtctt ctccaaggac gaggcaagcg
    11041 gaaaaacggg atacaaaccc gttaccgccc gatacggcaa tccgtatcaa gaaaccgttt
    11101 acattaaagt ttcagacggc atcggcaaca gccaaaccct gatttccaac cgcatccatc
    11161 cgttttattc gggcggcaaa tggattaaag cggaagattt gaaagcggga agcaggctgt
    11221 tatccgaaag tggcaaaacc caaaccgtcc gcaacatcgt tgtcaaacca acaccgctca
    11281 aagcctacaa tctgaccgtt gccgactggc atacttactt cgtcaagggc agtcaggcgg
    11341 aaacggaagg ggtttgggtt cataattctt gtccgcctaa aagaacagga agctccaaga
    11401 atgaaaaaca tggagacggc ggtcgaagtc aaatatcagc ggaatcaaga attgctgaat
    11461 taaaaaataa aattattccc ggaatgccca aaaatgaacg cttaaagatt gagaaaacaa
    11521 tcaaaaatat tacaaaaaat gccaatcgaa aagcaaaagg agaagagcat ggtcgacgcg
    11581 gtcgttaaaa ctcccgaatt tttacctttt acttctgtag gaatattccg ttttggtgcg
    11641 gatataacac agtacaaaaa catactggga acttttatgt atgaacctcc tgatgagttt
    11701 agaacagaat attatgaatc tcccgactca aatttactaa ttgccgtcaa gaaaaacaaa
    11761 attatttcga tattttgtta tcaggagcta tattttatgg gcgttaatat aataggtctg
    11821 aattttgaag attttaaaca gcttttccat caccctaaat catacggtgt tgataaatat
    11881 tatttatcaa atgaatctta tccgacatat gtctatgagt ttgatgaaat aggagtacaa
    11941 gcttgggaag caaaagggaa aattgttact atcattgccg ggggcaaaga caattattcg
    12001 acagaacctt actacgatga ataacattaa tggcaggcat aggttgggtt gagaactcaa
    12061 caacaaaagg tcgtctgaaa ccgtaatcga tttttcagac gacctttctg tcaatccaaa
    12121 cagattgtcg aatcttaatc caacctgtgc ttgctgtacg gaacaggcac ggtgttcatt
    12181 cacaagttaa gtcatatatt gaatcaaaag gcggcattgt taaaacaggt ttaggagatt
    12241 aaacatggca tcatatgttt ccataaaagg atggattgaa tgctctgacg atgatataaa
    12301 aatcatccaa gaaaacatta ataatttttg gaataattgt cccttcaata tcgaagagaa
    12361 agaatctgca aaaatatata aaagcgggtg ggttttcccg acaaatagtt ttaattggag
    12421 cagctatatt ttttttggtg catgcgtaaa atcttatttc attatttatt ttgaaaaatg
    12481 cattaaaaca ataatggaat tggatattga aatatcaggt ttttttgaat tagattatta
    12541 tgaagatagt tataaagtac attggaaaat aaataatgga aatttgatac aaacgactaa
    12601 ttaaatggac aaatataagt tagattggac acccaaacct aaaaactgtc tgaaactcaa
    12661 tttggttttc agtaagcgta ggttggctta aaaacccaac caccaaaatg ccgtctgaag
    12721 cggtattcag ctttcagacg gcattttgat gaatgaaaca ggatattgag aactaagttc
    12781 tttaaaaatc ctacacctgc tccttccacg gcagcacctt ggtcaaaacg gcagacggct
    12841 acaaagccat tgcccgtatc cgagtcggcg accgcgtctt tgccaaggac gaggcaagcg
    12901 gaaaaacagg atacaaaccc gttaccaccc gatacggcaa tccgtaccag gaaaccgttt
    12961 acattgaaat ttcagacggc atcggcaaca accaaaccct gatttccaac agcatccatc
    13021 cgttttacag tcaaggaaaa tggatacagg caggtcgtct gaaaaaaggc gacaccctgc
    13081 tttccgaaag cggtgcaaaa cagacggttc aaaacattac cctcaaacag cagccgctca
    13141 aagcctacaa tctgaccgtt gccgattggc atacttactt cgtcaagggt gatagggcgg
    13201 aaacggaagg ggtttgggtt cataatgatt gtccgtatgg tagttctagc gcaaaaggta
    13261 aaagtggcag tgagagaaat actgctaaac gtggaacctt cagacaagaa acgctaaaaa
    13321 atgcatggga tttggcagca gatggtagcc agcctaattc aaaaaaatgt cctacatgtg
    13381 gtaaagatgt atatggtaat ccccataaca aggagaaacg taatacaaaa gatggttggg
    13441 atggaagtca taatccatca tggagtaacc gtcaacatag ttctgatcgt aaggagcaac
    13501 taaatgatta taataaagga gtaagtttag aatgcagaca ttgcaatcga tctggtggca
    13561 acaaggatga aaggtttaag aaaaaatgat tacagtcgaa catttagagc attatttggg
    13621 tgaaatcgaa agcggtataa aatgcttgga tcgacgttat catctcagcg tttccgtctt
    13681 cccatcacaa ccatataaag gggtaactac tttttctact ttaggcttga atcgatatga
    13741 cttgaactat aaaagtaggt ttgaattaat ttttacctgt tctgaagaat ggaataaaga
    13801 aaatattgca gcttttctat caggagtggc tgaatatttg attgacaata gacaacctat
    13861 tttaagaggt gaaattattc aattacccag ggtaattatc gaaggtagca aaatggatgc
    13921 actgtatgtt tccgccccat tttatttcga tgatgatttt caggtctgtt atggcggaca
    13981 ctacaatact gtttttcctt tgcttgtccc gttgtataaa caggaagcag aattggtgga
    14041 aaaaaagggt tggaatgctt ttgagcagtt cttgctggat agtgaagttg gcaacctttc
    14101 ggatatgaat cggaaaccgt ttgtttggta agggctttct taaatttgat taaaggtcgt
    14161 ctgaaaccgt gtttaacttt cagacaacct ttccttcatt tgaaacagga tattgggaac
    14221 taagttcttc aaaaatcctg tctccgtccc ttatacgtcg gtgctttagt caaaacggca
    14281 gacggctaca aagccattgc ccatattcaa gccggagacc gcgtcctttc caaggacgag
    14341 gcaagcggag aaacgggata caaacccgtt accacccgat acggtaatcc gtatcgggaa
    14401 accgtttaca ttaaagtttc agacggcatc ggcaacagcc aaaccctgat ttccaaccgc
    14461 atccatccgt tttacagtca aggaaaatgg atacaggcag gtcgtctgaa aaaaggcgac
    14521 accctgcttt ccgaaagcgg cgcaaaacag acggttcaaa acattacctt caaacagcag
    14581 ccgctcaaag cctacaatct gaccgttgcc gactggcata cttactttgt caaaggcgat
    14641 aaggcggaaa cggaaggggt ttgggttcat aatgattgtc cgtatggaaa tttatcggat
    14701 aataaatctg ttggcgaagg aaaaaaattt acaccagctc aaaagaaagc aatcatccaa
    14761 gaaaacatga atagaaacgg aggggtagtg aagtctgacc aatctggaga agttttggtt
    14821 cgtcctaaaa agagccaaaa aggtatcacc cccccatcaa atgaatggca gattgaccat
    14881 gtgcaagcaa aaagtaaagg aggttcaaat agttataaaa atgcacaggt tttatccaga
    14941 agagaaaata ttaagaaatc aaataaatag gtatcaatat gcaatggaaa tttgaagatc
    15001 ctcaaaatac tgccgttatt accaccagaa gaattttgtc taaaaaaacg gaatcttaga
    15061 agtatggcat gatgctgatg atggaatgtg gcaattctta gatggcaatg aaattcatga
    15121 aggagatgct gtgatagtta gtttaaaaga aattgtcact attgattcct cagtcaatct
    15181 cttaagtaat ttacctcttg gtggttacgc ttggagaaat actatatcgg aaaaatggaa
    15241 tgttgattag caagcgtagg ttaggttaaa aaaccaacaa tcaaaggtcg tctgaaaccg
    15301 tgtttagttt ttcaaacgac ctttccttca attaacatag aatgttgggt ctcgacccaa
    15361 cctacacgct tactaatctc aaatataacc ttatgaaata atgagtattt aaaagatgga
    15421 aacattagac gaacgaataa aaaatttagg aaaatctctt gaagatagaa ttgacgctaa
    15481 tctaattgat gccacactag agtacattac tttttcagaa cgtttgctag cttttgaaac
    15541 gctatgtgat tatattgaag atttcaatat ccagcttacg gaaaaagaat cccaagaaat
    15601 ctcttttatt aataaggaat ttggaattga aagtacatca gattaataaa tattaggtcg
    15661 gtttaaaaac ccaacaatca aaaagtcgtc tgaaactgct tttaattttc agacgaccta
    15721 tttccttcat ttgaaatagg atattgagaa ctaagttctt caaaaatcct acacttgctc
    15781 cttccacggc agcaccttgg tcaaaacggc agacggctga aaagcaaaca ccgtccgtcg
    15841 tgttgccgtt tgcggatgag tacgggtcaa ccccaatgcc gccgaaaccg tcgaagccgc
    15901 cttcaacatt gccgccgcca aagccgcgaa gttggcaaaa acggtaaaac cggggagata
    15961 aaagccgatg gcaggaaagt aaatgtgagg atagacagta cggaggcaga cctgctttat
    16021 ccggcagggc aataagaaaa caaaaatcag atatggaaaa cgatagtgaa gattaaacca
    16081 ttacaatttt ctaacaataa tcacagattt tacgtagaca aaatttgtgt taccgaacaa
    16141 gatgtgaaca ttttggcatc cgaccgaaat tatgaattaa atattgaaat atttattgac
    16201 aatataattc attttcaaat aacagatgaa tcttataaag taaaattttc agaatattta
    16261 tttgaaaata aagaaaaaaa tgattgggat agaaatcctg ctataaatta ttttttcgag
    16321 ataatagatg acagttatat ggactggttg aaagaagaaa gttttgattt ttttgaaaag
    16381 aaatattata aggcttatat tttctttttt agcgattctg taatagaagt tatcagctcg
    16441 acagaacctg tattttattc aaaataacaa attatcaaac aaagctctga ttaaaaaccc
    16501 aacaatcaaa atgccgtctg aagcggtatt cggctttcag acggcatttt ctccgattgg
    16561 cacagaatgc aggggcttgc cggcttgatt ttgccgaagt tgttggcacg caatttggaa
    16621 gaggcagcaa tttatggaaa atagatttgc aaaaatcgtt aaggatattt ttagttttac
    16681 ccaatttgtt tccgaagcgg aaaataaaat tcctaaccaa tcctctcgtt attacgattg
    16741 ctggtgggaa ttggaaatct tgaatgcttc cgcattggaa gattgggaaa tatcgggaaa
    16801 gcctgaaaaa tgggagaaat ggacagaaaa atatcagacc gaagcgttac agtcagtcaa
    16861 gcatctattt gccgaagaag ttcctgaaaa taatatagtt tgcgatattt ctcatttttt
    16921 gcattttgcc gattgggcag aagccgacat tcccaatcaa tcacgtttat atgccgaata
    16981 ttggtgggaa atggaaatgt tcaaaatgtc ggttttagaa gattgggaac actcgggaaa
    17041 accgttagat tggaaaaaat ggcaaaggca atatcgatct gaagcatttg aattagttaa
    17101 aaaattgaac cgaagcaaac aagagtaaca agccgcagcc tgcataaggg tttttaaagt
    17161 acggcagcaa ccgtagatta aattaaaaat caaacaatca aagctcgtct gatataatcg
    17221 atatattctg ttaaacgaaa aataaatatg tttaaaaaat tcaaaccggt actgttgtca
    17281 ttttttgcac ttgtatttgc cttttggctg ggaacgggta ttgcctatga gattaatccg
    17341 cgttggtttt tgagcgatac ggcaactgaa atacctgaaa atccgaatgc ttttgtggcg
    17401 aaacttgccc gcctgttccg aaatgccgac agggcggttg tcatcgtgaa ggaatcgatg
    17461 aggacggagg aaagtcttgc cggagctgtg gatgacggtc cgttgcagtc ggagaaggat
    17521 tatctcgcgc tcgctatccg gctcagtcgt ttgaaagaaa aggcgaaatg gtttcacgta
    17581 acggagcagg aacatgggaa agaggtttgg ctggattacc atatcggcga gggcggtttg
    17641 gttgcggttt cgctttcgca acgctcgccg gaagcgtttg ttaatgccga atatctgtat
    17701 cggaacgatc gtccgttttc tgtaaatgtg tacggcggaa cggctcacgg agaaaattat
    17761 gaaacgacag gagaatatcg ggttgtttgg caaccggacg gttcggtatt tgatgcgtcg
    17821 gggcgcggga aaatcgggga agatgtttat gagcattgcc tcgggtgtta tcagatggcc
    17881 caggtatatt tggcgaaata ccgggatgtc gcgaatgatg agcagaaggt ttgggacttc
    17941 cgcgaagaga gcaaccggat tgcatcggac tcgcgcgatt ctgtgtttta tcagaatatg
    18001 cgggaattga tgccccgggg gatgaaggcg aacagtcttg tggtcggcta tgatgcggac
    18061 ggtctgccgc aaaaagtcta ttggagtttc gacaatggaa aaaaacgcca gagtttcgaa
    18121 tattatttga aaaacggaaa tctttttatt gcacaatctt cgacggtagc attgaaagcg
    18181 gatggcgtaa cagcggatat gcagacctat catgcgcaac agacgtggta tttggatggc
    18241 gggcggattg tccgcgaaga gaaacaggga gacagactgc ctgattttcc tttgaacttg
    18301 gaagatttgg acaaagaagt gcgccgttat gcggaggctg cggcgagacg ttcgggcggc
    18361 aggcgcgacc tttctcactg aacgcaaatg ccgtctgaaa ccggttttca gacggcattg
    18421 gagagtcaaa cgctttttgc aataccgtat atgccgaatc cgattcgcta caaattgaaa
    18481 accacaatcc aaaaaacgga aatacacatt aaacgggcct ttttaccgac cgtatcatcc
    18541 cataggtttt ccacaccttt tttcatccat aaattcaaac catttaagtt tgcatcctta
    18601 ccgacaattg cagcagcatc atccgcataa cggtcaccca aattagccaa ataacgccaa
    18661 ccgccatagg tatcgccacg gaaagcataa ccacgcaagg tttggatttg ttctggtgtt
    18721 aaaacaactt caccctcatt cataataaga tcctttaaat tattttttac ttggattgtt
    18781 tacaaaactc tgtaccaatt gctctacttg ttggtgataa cctaccaact cctgctgtgt
    18841 gagctgctgc ttttcccgaa taaacgggta ataccgtacc gtgaaaccgt taatacagga
    18901 acctacgcta gtgctgtaat cgttctctcc atacctatga tagttccgat gagtaataat
    18961 cgccggattt tctccttttt taatatagta aaattcatga aaatatggat tttcaggaat
    19021 atgtctttta tcttcataag cttcatattc aggataggca gatggcattt ttttaacccc
    19081 gtaagtaagc aatctttctc ccatagtcgt gcttaaacta cacgcatctt ttcggataac
    19141 aatatcgtcc acgctatcca aaccgtcgcg tagaaattgg ataaagtgtg ctttgttttg
    19201 ctggttgtat ggctcaagaa cccagccttg gtcggttttt ttgtaataga cgctaatctc
    19261 tatcaaatta atggagtaag catcctgccc gggcgtgtcg gaaagccatt ttgtggcatt
    19321 gtcttgcgta taccgtgcaa gatagccata agggataacc attttggtgc cctgaaaatc
    19381 aaatgtaacc gtatgttcaa atcctgtcat tggctcggga ttgttgaaac tggtttgttc
    19441 attaacaggt tcacatgagg tcatagtaaa aacactccca ataaacaaaa taaaaagttg
    19501 ataaatggta gtagcatatg gtctcataat ttcaagccta gaaattagtt aaagaatata
    19561 ttatggtaga tactaactct ttaagttgac atattgtgcg atgtcgaggg ctgtaccata
    19621 ttttcccatc gtattttccc gttctttata tgagcggcag gcatcctcat aaaagaaggg
    19681 ataccgatac ggaaaaatac cccggcataa aaaatatact gattaatcaa tacaaatcca
    19741 acaaacagtt catcgtattc ttttctgttg gcgtataaaa aatactgata tatgccttca
    19801 ctttcatagg gcgacgcttt atgtaccgtc ctgtgtgttg aaacgtcggt tttccttacc
    19861 gcctgccccg cttttccctg attgctgcca actgccgtcc gaacctgaac cgtcaggttt
    19921 cagacggcat tttttccgcc tgttcccaca atttccgttt ttgtgcggcg gtcagttttt
    19981 tgacggcgat ttcctgtttg agcgccgtgc ctttatccat cccgcctgca acgatacgca
    20041 tcgccaccgg tttgaatacg cgggtatatt tcgcgccttt accggttgtg tgggcggcaa
    20101 gccgctgttg cggattcggg ctgatgccgc aatagaacgc gctgttttca cacaatatca
    20161 ggtaaacgct ccagtttgac gcgttcatct gcctgcatcc tgagtttttt ccccgttcca
    20221 aggcgcaact ttcagcagca gcagcatacc cggcagggca agtatgaaac acagctggaa
    20281 aaacggtaca taaccgagcc attcgatcag ataaccggca aaggaattga tgaccgtgcg
    20341 cgggacggcg gacaggctgg taaacagcgc aagctgcgtt gcggtaaatg cgggattggt
    20401 ttcacgcgcc atatacgata cgaacgccgc cgtccccaac cccacgccga ccgcttccgc
    20461 gccgataact gccgccagca tcagcctctc gcctgtgccg accgtgtcga aaggtccgaa
    20521 ccctgccagc catacaaacc ccaaaacggt tacagcctgc accgcgccga atagccacaa
    20581 ggctttgttt acgccgattt tcagcatcca cacgccgccc aagatacctg ccgccactgc
    20641 cggccacagt cctgcatttt ttgcaatcaa accgatgtct gtcttactga aacccatatc
    20701 cagataaaac ggcgttgcca acgcggttgc catactgtcg ccgagtttgt aaaggaagat
    20761 aaacagcagc acgcacaccg ccgaagcgat gcccttgcgc gtaaaaaatt ctttaaacgg
    20821 ctctaccacg gtctgcttca acgttttagg aacggcaggc ggcaacacgg gttcgcgcgc
    20881 aagaaacagc gtcatcagaa gaccgggcag cataaacagc gaagtgatga caaacacctc
    20941 cggccacggc atcctgtctg ccagcaccaa actcaatgaa ccgggaatca gggcggcaac
    21001 ccgataggcg ttcacatgaa ccgagttgcc caaacccaat tcctcatccg acaaaatctc
    21061 gcgcctgaac gcatccaata caatgtcctg actggcggaa aaaaaagcga caagcaccga
    21121 caagccggca atcagcggca gatgattacg agggtttaaa aaggcataag ccgccaaagc
    21181 cgccagcaaa cctgcctgcg tcagcagcat ccacccgcgc cgccgcccca aaacgggcag
    21241 cctgaccgcg tccatcagcg gcgaccacaa aaatttccaa gtaaacggca gaccgattaa
    21301 cgccatcagc ccgatgctct tcaaatccac ctgctcgctg cgtaaccacg ccggaatcag
    21361 gttaatcaga aagtacagcg gcagccccga ggcaaacccc gtaaaaatac agacaagcat
    21421 attgcgggaa aagatttgcc cgataaaacc tgatttcgat gcagtcatcg ttcgtgcagc
    21481 ccaaaaaaaa caaaagccta ttgtagcaaa tatcgcccgc ctgctgaaaa acgccgcccc
    21541 gcgccgccgg tttgccgttc aaatgcaaaa tgccgtctga aactgtgttc agacggcatt
    21601 gcttttctga aaaccagacg tgcttacagg ctgtaataca tttcaaattc cagcgggtgc
    21661 ggcgccatgc ggatgcggcg tacgtcttct tctttgaaag cgatgtagct gtcgatccag
    21721 tctttgctga acacgccgcc gcgcaggagg aattcgtggt cggctttgag ggcggccagt
    21781 gcttcttcca aagaagcgca aacggtcggc accaatgcat cttcttccgg cggcagatcg
    21841 tacaggtttt tatcggcagg gtcgcccgga tggattttgt tttgaatgcc gtccaaaccc
    21901 gccatcaaca gggcggcaaa tgccaaatac gggttggcgg tcggatcggg gaaacgcgct
    21961 tcgatgcggc gcgccttgct gctgttcacg gacggaatgc ggatggaagc ggaacggttt
    22021 ttggcggagt atgccagttt ggtcggcgct tcaaagtgcg gcacgaggcg tttgtaggag
    22081 ttggtggacg gattggtaat cgcgttcaag gctttggcgt gtttgatgat gccgccgatg
    22141 tagtagagcg cggtgtcgct caagccggca tagccgtcgc ctgcgaacag gttttgaccg
    22201 tctttccaaa tggattggtg aacgtgcata ccgctgccgt tgtcgcccat aatgggtttg
    22261 ggcatgaaag tggcggtttt gccgaagttg tgggcaacgt tttgaatcac atatttcatg
    22321 tcttgggttt ggtcggcgcg tttgaccaaa gtagcaaagc gcgtgccgat ttccatttgg
    22381 ctgccggtgc cgacttcgct gtggtgcact tccacttcaa taccgagttc ttccaaaatg
    22441 tttaccatcg ccgaacgcaa atcctgaccg cagtcaatcg gtgcaacagg tgcgtaaccg
    22501 cctttgacgg tcgggcggtg gccggtgttt tgaccgtcca tatgcagacc gcttgcccac
    22561 gcgccgcttt cggacgtgat ttcgtaacgg gttttgtgca tatcggtttc aaattctatg
    22621 ccgtcgaata cgaaaaactc gggttcggga ccgaaatagg cggtctcgcc gataccggaa
    22681 gatttcaaat aggcttcggc tcggcgggcg atggagcgcg ggtcgcggtc gtaaccctga
    22741 ccgtcggcgg gatcgataac gtcgcaagtc aacacaacag tcgcatcatc ataaaaagga
    22801 tcgacgaagg ctgtagacgc atcgggacgc aactgcatat cggaagcctg aatgcctttc
    22861 cagccgccga tagacgaacc gtcaaacgcc tgaccgtttt cgaaccactc ttcggggtct
    22921 tccaacacga tgcgcgcagg cacggtaaag tggtgctgct tgcctttggt atcggtaaag
    22981 cgcaaatcga caaagcgggc ttcgctttct tcaatcaatt ttacggcgtt tttaatagac
    23041 atttttcagc tcctggaaaa gggaaatagc aaaatatacg gaacgcggca gattagccca
    23101 aagccagcat gattctacca cgtccatgcc gtctgaaact cgccctgcgt caaatttcaa
    23161 gctggaaaat atagtttcag acggcaagat tgtcaacaat atgcttcggt ttgtctgttc
    23221 aaaagcagaa tacccgccct tttgtccgaa tgccgacaaa acagatgccg cctgaaaaca
    23281 gtttagacgg catcgttccc atcttcgcgc cgccgttata aaatgaccgc cccgccttga
    23341 tggaatatga ctatgcacgc cctcccccgc tacgccgttt ttggcaaccc cgtcgcccac
    23401 agcaagtcgc cgcagattca tcaacaattt gcccttcagg aaggcgttga cattgaatac
    23461 gaacgcattt gcgccgacat cggcggtttc gcgcaggcgg tttcgacatt ttttgaaaca
    23521 ggcggttgcg gggcaaacgt taccgtaccg ttcaagcagg aagcgtttca tctggcggac
    23581 gagcattctg aacgcgcatt ggctgccggc gcggtcaaca cgctgatttt tctgaaaaac
    23641 ggaaaactgc gcggcgacaa taccgacggt atcggtttgg ccaacgacat cacgcaggtc
    23701 aaaaacattg ccatcgaagg caaaaccatc ttgcttttgg gcgcgggcgg cgcggtgcgc
    23761 ggcgtgattc ctgttttgaa agaacaccgt cctgcccgta tcgtcattgc caaccgcacc
    23821 cacgccaaag ccgaagaatt ggcgcggctt ttcggcattg aagccgtccc gatggcggat
    23881 gtgaacggcg gttttgatat catcatcaac ggcacgtccg gcggcttgag cggtcagctt
    23941 cctgccgtca accgtgaaat ttttcgcaac tgccgccttg cctacgatat ggtttacggc
    24001 gacgcggcgc aggcgttttt gaactttgcc caaagcaacg gcgcggccga agtttcagac
    24061 ggcctgggca tgctggtcgg tcaggctgcc gcctcctacc atatttggcg cgggtttacg
    24121 cctgatatcc gccccattat cgaatacatg aaagccctgt aaccatgttc cgcatcatca
    24181 aatggctgat tgccctgccc gtcggcatct ttatcttttt caatgcctat gtgtacggca
    24241 acatcattac ctaccgcgcc gtcgcgcccc atcagactgc ctttatgtcg atgcggatga
    24301 agcagtttga acaggaaggt cgcgatgtcg cactggatta ccgctggatg ccctacaacc
    24361 gcatctcggt caacctgaaa aaagccctga ttgcttccga agatgcccgt ttcgccgggc
    24421 acggcggctt cgattggggc ggcattcaaa acgccatcag gcgcaaccgg aacagcggca
    24481 aagtgaaggc gggcggctcg accatcagcc agcagcttgc caaaaacctc ttcctcaacg
    24541 aaagccgcag ctatatccgc aaaggcgaag aagcggcgat taccgcgatg atggaagccg
    24601 ttaccgacaa agacaggatt tttgaactgt atttaaactc aatcgaatgg cactacggcg
    24661 ttttcggcgc ggaagccgcg tcccggtatt tttatcaaat acccgccgcc aagctgacca
    24721 aacagcaggc ggcaaaactg acggcgtgcg tccccgcccc gctctactac gccgaccatc
    24781 cgaaaagcaa acggctccgc aacaaaacca atatcgtgct cagacgcatg ggttcggcag
    24841 agttgcctga aagcgacacg gactgattgt ttcagatatg gaaatgccgt ctgaactgcg
    24901 gttcggacgg catatgtttt ctggttttta tagtggatta acaaaaatca ggacaaggcg
    24961 acgaagccgc agacagtaca aatagcacgg aatcgattca cttggtgctt cagcacctta
    25021 gagaatcgtt ctctttgagc taaggcgagc caacgctgta ccggtttaaa tttaatccac
    25081 tatacctgcc cgacagccgc aaagaccgta tcatacatag caggcattgc ggtgcgggat
    25141 tactgccgca aacggcaggc aaaaaaaata accgcttcaa ggcggttttt tggtggccag
    25201 aggcggaatc gaaccgccga cacacggatt ttcaatccgt tgctctacca actgagctat
    25261 ctggcctttg tctgtctcgt taagagatgc gtattaaacc aaattacggg acgacatgca
    25321 agcatatcgg gcaatattct ttgaaaacag gtttaagtca atgttttaaa tttgaattaa
    25381 tttatgtaaa aacaacataa atccgtattt ttgccgcctg cccgacgata ttaggtcgcc
    25441 cgtctgaaaa atattttcaa tatttgaagt tcttacccag ataaacagaa cgaacctgtt
    25501 cgtttccgac caaatcatca ggttttcccg atgccagcac cgcaccgtct gaaatgatgt
    25561 aggcgcggtc gcagatgctg agggtttcgc gtacgttgtg gtcggtaatc agtacgccga
    25621 taccgcgcga cttgagaaat ccgatgattt tttggatgtc gatgacggcg atgggatcaa
    25681 caccggcaaa aggctcatcc agcaaaataa aatgcggttt catggcgagt acgcgggcga
    25741 tttcgacgcg ccgccgttcg ccgccggaca gcgacggcgc ggggctgcgg cgcaagtgtc
    25801 cgatattaag gtcggcgagc agtttttcga tttccctgtc gatttgattt ttatctttgg
    25861 ttctgatttc caagatggcg cggatgtttt gttcgacggt cattttgcgg aatatcgagg
    25921 cttcctgcgg caggtagccg acaccgaggc gggcgcgttc gtgtatgggc aggtggcgca
    25981 attcttgtcc gtctagggtt acgctgcctg cgtcggcggc aatgagtccg actatcatgt
    26041 agaagctggt ggttttaccc gcgccgttgg gcccgagcag gccgacgact tctccgcttt
    26101 cgatttcgag ggagaagctt ttaacgactt ggcgtttttt gaaacttttt tgcaggtttt
    26161 gaacaacaag gcggctgacg tttgcgctca taaatatctc ttcaatatct tcggtcggca
    26221 aatgccgtcc gaaccaggtt tatgtttcag acggcatttt gggattattc ggatttttgc
    26281 gtactcgaag gctggataac gacgctgacc ctgccggatt tggaagcgga ttttgcgccg
    26341 gattttgtgc tgccgctgat ggtatagact tcggttttgg tgttgtatgt aatcaccgca
    26401 ccttcggcga catcgccgcc gcgctgtact ttggcattac cggttaagac tacggtgctg
    26461 cctgcagatg aataagcaac gttgtttgcc tgtccgcgca ccgtgccttt gccgccgtcc
    26521 aatgtctggc tgaagcggac tggcgaacct tccgccctca cggattcgcc gcctttgccg
    26581 ccgcgtgtaa cattgacgcg ggcggcggaa atattgagcg taccctgtct gatgacgacg
    26641 tttccgctga atgtggtgct ttggttggct tgatcgagcg aaccttggtc ggcctcaatc
    26701 tgaataggct gcctgctgtc gctttgaagg gcaaaagcgg gggacgccga aaaaaatgct
    26761 attaaaacaa atagcttaca tatcttttgt atcataaatc gtggctttca ctttagatga
    26821 gaagttcaac atgcctgttt tgtggtcgta agtcatgccg cccgcctgac cgtgcgatgc
    26881 accatattgg aaactgacag gcgtatcggt ttgggcatat tgagattcgg tatcgacgtg
    26941 cagcttttcg gcttcaactt tacccgcctg ccgtttgccg tcggcggttt tggtcagcac
    27001 aacgttgttt ttaaaaagaa cctgtttgtt ttcggtatgg taaacggctt catcgctgcc
    27061 gacttcgtac aacaacctgc cttcttggaa gaacacgaga tgcggtgagt cgaaatgaat
    27121 gtcgctgctt tcgggaaact gtttcgcgcc cttcgaactc aaatgttctt tcaagtatcc
    27181 ctgttcgtca aaccgcctgc catccaatcc gtccattgtg tattgcggtt cgtcgggatt
    27241 gagcctgact tcttcaatct cgacttcgct gatgcgtccc aaccatgccg acaggctgcc
    27301 caaggcaacc gccaatatca atgggaacgc aattccgtac cgccatctta ctttcatttg
    27361 atgtactcgt tcaaagccgc gcccaaagtc ccttgcgcct gcataatcag gtcgcacact
    27421 tcgcgcaccg cgcccgcacc gccggggcgt ttggcaatat aggcggcgtg ttgcagcgta
    27481 aaccaatgcg cgtcggggac ggcaaccggc aatccgcagc gtaccataac gggcaaatcg
    27541 accacgtcgt cgccgacaaa ggcacactcg gcttcttcca cgccgacctg agcgcgcagc
    27601 tcttcatacg cggcgcgttt gtccgaaatg cctttgaagt agtaatttat gcccaactgt
    27661 ttgacgcgga tgccgacgga gggcgcgtcc cgacctgtga taatcgcagt ctgcacgccg
    27721 cttgcctgaa gcattttcag accgtgtccg tccagtgtgt gaaacgattt gatttcttcg
    27781 ccgttatcgc ggataaagat gcgcccgtcg gtcaaaacgc cgtccacatc caggatcaac
    27841 agtttgattt tggcggcgcg cgcctgtaat tcgggagaaa ttgcctgcat gggatttcct
    27901 tgttttcaga cggcatatct taccacaaat gccgtctgaa acggctgcaa cgccttatat
    27961 agtggattaa caaaaatcag gacaaggcga cgaagccgca gacagta
//
LOCUS       DAWKOX010000005        26899 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.005, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000005 DAWKOX010000000
VERSION     DAWKOX010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26899
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.005"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(112..858)
                     /gene="fabG"
                     /locus_tag="WJK78_000150"
     CDS             complement(112..858)
                     /gene="fabG"
                     /locus_tag="WJK78_000150"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ7597133.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
     gene            complement(920..2485)
                     /gene="guaA"
                     /locus_tag="WJK78_000151"
     CDS             complement(920..2485)
                     /gene="guaA"
                     /locus_tag="WJK78_000151"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ7597134.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRDIFDDAPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAKEKKLTNAKWLAQGTIYPDVIES
                     AGAKTQKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            complement(2585..4450)
                     /gene="msbA"
                     /locus_tag="WJK78_000152"
     CDS             complement(2585..4450)
                     /gene="msbA"
                     /locus_tag="WJK78_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ7597135.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            complement(4589..5515)
                     /gene="fabD"
                     /locus_tag="WJK78_000153"
     CDS             complement(4589..5515)
                     /gene="fabD"
                     /locus_tag="WJK78_000153"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ7597136.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFTGQAVVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVKQICAESTQGEVVEAVNFN
                     SPGQVVIAGNTAAVERAMLAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQVAAFIEAH"
     gene            complement(5541..5912)
                     /locus_tag="WJK78_000154"
                     /pseudo
     CDS             complement(5541..5912)
                     /locus_tag="WJK78_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
     gene            complement(5959..6921)
                     /locus_tag="WJK78_000155"
     CDS             complement(5959..6921)
                     /locus_tag="WJK78_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ7597137.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDATGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            complement(6948..7151)
                     /locus_tag="WJK78_000156"
     CDS             complement(6948..7151)
                     /locus_tag="WJK78_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597138.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPVHGNLHLKTICIPNHTPI
                     PVSVICTLPVLGNHRFFAYNSRI"
     gene            complement(7171..7362)
                     /locus_tag="WJK78_000157"
     CDS             complement(7171..7362)
                     /locus_tag="WJK78_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597139.1"
                     /translation="MIQTILEDGDIEVKNLKTENYSGKAREILGDSYPIEHISKNIST
                     IQNIISEFMIQKQTPAPII"
     gene            complement(7613..7864)
                     /locus_tag="WJK78_000158"
     CDS             complement(7613..7864)
                     /locus_tag="WJK78_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ7597140.1"
                     /translation="MKTLEKRMKALDKQMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            complement(8000..9055)
                     /gene="plsX"
                     /locus_tag="WJK78_000159"
     CDS             complement(8000..9055)
                     /gene="plsX"
                     /locus_tag="WJK78_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ7597141.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENADGL"
     gene            complement(9143..9670)
                     /locus_tag="WJK78_000160"
     CDS             complement(9143..9670)
                     /locus_tag="WJK78_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ7597142.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            complement(9845..10024)
                     /gene="rpmF"
                     /locus_tag="WJK78_000161"
     CDS             complement(9845..10024)
                     /gene="rpmF"
                     /locus_tag="WJK78_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ7597143.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            complement(10058..10561)
                     /locus_tag="WJK78_000162"
     CDS             complement(10058..10561)
                     /locus_tag="WJK78_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ7597144.1"
                     /translation="MSDPNLIDSEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            10709..11299
                     /gene="maf"
                     /locus_tag="WJK78_000163"
     CDS             10709..11299
                     /gene="maf"
                     /locus_tag="WJK78_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ7597145.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLAGRFPEALIVGADQVAWCDGRQWGKPMNLANAHKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEAL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            11358..12071
                     /locus_tag="WJK78_000164"
     CDS             11358..12071
                     /locus_tag="WJK78_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ7597146.1"
                     /translation="MVSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQSVVSKTVADWRR
                     MKEMPNLKKRPTIFVMYAG"
     gene            complement(12152..13789)
                     /gene="yidC"
                     /locus_tag="WJK78_000165"
     CDS             complement(12152..13789)
                     /gene="yidC"
                     /locus_tag="WJK78_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ7597147.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKAEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMVAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRTQGEVVS"
     gene            complement(13961..14182)
                     /gene="yidD"
                     /locus_tag="WJK78_000166"
     CDS             complement(13961..14182)
                     /gene="yidD"
                     /locus_tag="WJK78_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ7597148.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            complement(14247..14612)
                     /locus_tag="WJK78_000167"
     CDS             complement(14247..14612)
                     /locus_tag="WJK78_000167"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ7597149.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVHRKFDRSTAKQAR
                     AELAQLMFGNPATGCGKQV"
     gene            complement(14615..14749)
                     /gene="rpmH"
                     /locus_tag="WJK78_000168"
     CDS             complement(14615..14749)
                     /gene="rpmH"
                     /locus_tag="WJK78_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ7597150.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            15041..16597
                     /gene="dnaA"
                     /locus_tag="WJK78_000169"
     CDS             15041..16597
                     /gene="dnaA"
                     /locus_tag="WJK78_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ7597151.1"
                     /translation="MTLAEFWPLCLRRLHDILPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVESAVEPAEPSLHA
                     VSEEMPVQEVLLDELPSEGSAKSVQAKTAADILAERMKNLPHEPRHTAGSASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            16676..17779
                     /locus_tag="WJK78_000170"
     CDS             16676..17779
                     /locus_tag="WJK78_000170"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ7597152.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(17748..18017)
                     /locus_tag="WJK78_000171"
                     /pseudo
     CDS             complement(17748..18017)
                     /locus_tag="WJK78_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(18042..20099)
                     /gene="ppk1"
                     /locus_tag="WJK78_000172"
     CDS             complement(18042..20099)
                     /gene="ppk1"
                     /locus_tag="WJK78_000172"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ7597153.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELAQEGIHFYRRRNWTGAQKKWIESYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDVQNLRAAIQNELHDREYGDGVRLEVADTCPSYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIIGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALDDNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            complement(20268..20711)
                     /locus_tag="WJK78_000173"
     CDS             complement(20268..20711)
                     /locus_tag="WJK78_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ7597154.1"
                     /translation="MPFRLFLGILCDLSMVAPVYAQGQPDAVNAYIQKKKVIVNTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            complement(20718..21233)
                     /locus_tag="WJK78_000174"
     CDS             complement(20718..21233)
                     /locus_tag="WJK78_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ7597155.1"
                     /translation="MKIKQIVKPGLAVLAAGILSACATKSNVKADGATDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVHEWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            21500..24130
                     /locus_tag="WJK78_000175"
     CDS             21500..24130
                     /locus_tag="WJK78_000175"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ7597156.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     AAAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYADKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVSAEAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFKRLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLEAAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEASLVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            24365..25177
                     /locus_tag="WJK78_000176"
     CDS             24365..25177
                     /locus_tag="WJK78_000176"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HEZ7597157.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEQYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KNLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKEGFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            25170..25979
                     /locus_tag="WJK78_000177"
     CDS             25170..25979
                     /locus_tag="WJK78_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ7597158.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFADPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            25976..26530
                     /locus_tag="WJK78_000178"
     CDS             25976..26530
                     /locus_tag="WJK78_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597159.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRKLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYSINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
BASE COUNT         5929 a         6526 c         7808 g         6636 t
ORIGIN      
        1 cttgtgcctg atccgcaggg gcagggcggg gtgtggcgtg tgttcatttt gtttgggaat
       61 gcaaatgccg tctgaaaggg cttcagacgg cattgtcggc acggctgtcc gtcagggcat
      121 cagcatgccg ccgttgacgt gcagcgtctg gccggtaatg tattttgcct gatcggaagc
      181 caagaacaag actgcatcgg caatgtcttg cgcgtcgccg aatctgccca aggcggtttg
      241 ggcggtaaag gtttggcggg tttcttccgg cagggcgcgg gtcatgtcgg tatcgataaa
      301 gccgggggcg acgcagttga cggtaatgcc ccggctgccg acttcgcgcg ccatggattt
      361 ggagaaaccg attaagcctg cttttgccgc ggcatagttg gtttgaccgg cattgcccat
      421 cacgccgacg acggatgtga tgttgatgat acggccggcg cgctgcttca tcatgccgcg
      481 caagacggct ttggaggcgc gaaagacgga tttgaggttg acctgcatga tgtcgtccca
      541 ctcttcttct ttcatacgca tcaggaggtt gtcgcgggtg atgccggcgt tgttgaccag
      601 aatatcgagt ttgccgaacg ttttttcgat gtcggcaatc aggttttcga cggtttcggg
      661 ttcggcggaa tttaatacgc ggccttcgcc gccccattgc gccaaccgct cgctaatcgc
      721 cgccgcaccg ctctcactgg tcgccgtacc gatgactttg gcaccggctg ccgccagtgt
      781 gtcggcaatt gctgcaccga taccgcgcga ggcgcctgtt accaaagcga ttttgccgct
      841 taaatcttgt gtgctcatat tttttccttt tttccgataa tcgaaagact gcgccggacg
      901 gtgcagccct gtttgctggt tattcccact cgatggtggc aggcggtttg ccgctgacat
      961 cgtacaccac gcggttgatg cctttgactt cgttgatgat gcggttggac acgcgtccga
     1021 gcagtgagta aggcaactca gcccaatgtg cggtcataaa gtcgctggtg atgactgcgc
     1081 gcagtgcgac gacgtagtcg taagtgcgtc cgtcgcccat tacgccgacg gatttcacag
     1141 gcaggaacac ggcgaaggct tggctggtca ggtcgtacca agacgtgccg ttttcgtcgg
     1201 tggtgttgcg taattcttga ataaaaatat cgtctgcttg acgcaataag tcggcgtatt
     1261 cttttttcac ttcgcccaag atgcgcacgc ccaaaccggg gccggggaac ggatggcggt
     1321 acaccatttc gcgcggcaga cccaaagcaa cgcccagttc gcgcacttcg tctttaaaca
     1381 agtcgcgcaa cggctcaagc agcttgagct tcatattttc gggcagaccg ccgacgttgt
     1441 ggtgcgattt gatggcgtgg gctttttggg ttttcgcgcc tgcggattcg attacgtcgg
     1501 ggtaaatcgt gccttgcgcc agccatttgg cgttggtgag ttttttctct ttggcatcaa
     1561 atacttcgat aaattccgcg ccgatgattt tgcgtttttt ctcagggtcg gtaacgccgg
     1621 cgagtttcgc cataaactgc ccttcggcat cgacgtgaat cactttcaca cccaagttgc
     1681 gggcgaacat atccatcacc attttgcctt cgttcaggcg caacaaaccg tgatcgacga
     1741 acacgcaggt cagttggtcg ccgatggcgc ggtgaatcag cgcggcggct acggaagagt
     1801 ctacgccgcc tgacaaacct aaaatcactt cgtcgctgcc gacctgttcg cggattttgg
     1861 caacggcttc ttcgatgtag ttcggcatcg tccagcccgg ttgtgcgccg caaatatcca
     1921 agacaaagcg gttcaacagg gcgcggcctt gtttggtgtg ggtaacttcg gggtggaact
     1981 ggatgccgta gaattgtttt tcggcgtttt ccatcatggc aatcgggcag gacggggtgt
     2041 tgccgatgac ggcgaagccg tcgggcagtt tggacacttt gtcgccgtgg ctcatccata
     2101 cgtcgagtgt gttgggcgcg tcgtcgaaaa tatcgcgggt cagttcgctg tcgatggttt
     2161 tgacttgcgc gtaaccgaat tcgcgctggt tgccgggctg cacttcgccg cccaagtggt
     2221 gcgccataaa ctgcattccg tagcagatgc ccaaaaccgg aatgcccaaa tcaaaaatac
     2281 cggtatcggc ctgatagtcg gattcgtaaa cggaattagg gccgccggaa aggatgatgc
     2341 ctttggggtt gaaggctttg atttcgtcca aaggcatatc gaaggaatgc agttcgcagt
     2401 aaacgtgggc ttcgcgcacg cggcgggcaa tcagctgggt aacttgcgaa ccgaagtcga
     2461 ggatgaggat tttgtcttgg gtcataatgg gttttacagt gattgaagat aatcggatgg
     2521 gtcggcggat atagtgccgt ctgaaagggt cggggcgatt ataccatttc ggacggcatt
     2581 ttgtttatgc cgtccggacg gcggcatctt tgtttgagat attgcgtaac atcgtgtagt
     2641 agccgttttg ggacatcagt tgttcgtgtg tgccttgttc gatgattttg ccgtcgtcca
     2701 ttacgatgat gcggtcggcc ccttcgatgg tggtcaggcg gtgggcgacg atgatgccgg
     2761 tgcggttttc catcaggcgt tcgagcgctt gttggacgag gcgttcggat tcgttgtcta
     2821 atgcgctggt ggcttcgtcc aataataata tcggcgcgtc tttcaaaatg gcgcgggcga
     2881 tggcgacgcg ttgccgctgt ccgccggaca agttgctgcc gttcgatccg atgggctggt
     2941 gcagtccgag cggggagctg tcaatcaggc tttgcaggtt ggcggcttgg agggcggaca
     3001 ggacttcggc ttcgcctgcg tcgggacggc tgtatcggac gttttcaaac agggtgtcgt
     3061 caaacaggaa tacgtcttgg gagacgaggg cgaattgggc gcgcaggcag tcgagtttga
     3121 tgtcggcgat gtcgataccg tctatgcaga tgttgccggc agacggttcg acaaagcggg
     3181 gcagcaggtt gacgacggtg gatttgccgc tgccggaacg tccgaccagg gcgacgcgtt
     3241 cgccttgtct gatgtcgagg ttgaagttgt cgagggcttt gatgccgtcc gaacggtatt
     3301 cgacatcgac gttgcggaag ctgatacgcc cttcgacacg ctgcggcgcg agcgtgcctt
     3361 tgtcctgttc gggcggggtg tcgagaaatg cacatacgcc gtcggcggcg aggaacatcg
     3421 tctgcatagg gatgctgatg ttggcaaggc ttttgatggg tgcgtacatt tgcagcatcg
     3481 cgacgatgaa tgccataaat tcgccgatgg tggtgtagcc gttttggctt tgccacaggg
     3541 cgatgaagat gacaacggcg agggcaatcg aggcaatcag ttcgctgaac ggggaatgtg
     3601 ccgccgttgc ctgcgtgatt tttttgctga ggcggacgat ggtgcggttg accgcgtcaa
     3661 accggtttgc cgcctgcgcc tgcccgttga acagcttgac gacgcggtgt ccctgatggg
     3721 tttcggcaat cacgttgttc atcgtgccta tgcttttttg cgagtcggaa atgacgtgct
     3781 tcagacggtc gcggtagtag cgcgagagca gggagagcag ggggaacatc aggacaacga
     3841 tgaggctgag ctgccagttg aggtaaagca ggacgatggt caggccggta acgatcatcg
     3901 tgtcgcgcgt gaggacggtg aagatgtcgc tggcgttact gaccgactgt tcggtcaggt
     3961 tgagcatatt catcagtacg gtgccggacg gcgtttcctg atggtagcgg gaggaaaggg
     4021 tcagcatttt ggcaaacata tctttgcgga ttttgctgat ggtcatcacg gagacccaag
     4081 tcatcagata ggtgctggta aagcggcaga tgccacggat gacgacgagg atgatgagga
     4141 agagggggac ggtccagatt ttgttttccg tcccccaaac catataggta aactgttcgc
     4201 gccagttttg cagggtggaa atgatgccgg cggcggcaga cagctcgggc ggcgcggcag
     4261 gtgcggaaaa gccgtggtta atcagggggg cgatgaaggc ggcaaggtag ctttcggtgg
     4321 cggcaacgcc gaaaatggca atcagggcgg caacgatgcg gattttgtag gggcggacgt
     4381 acgccatcag gcgcataaag ctgcgcgcgt cttctttttt aaacagtccg aaagtcagtt
     4441 tttctatcat atcggtaggg cgggaactgc aacggcagcc gctgtcggtg gtttggtcgt
     4501 catcaattat agcgcaaata tgcggctgtt tgccgttcgg acgtgaaaag cagcctgaag
     4561 agggcaggct gctttttgcg gaacgaagtc agtgcgcttc gataaaggcg gcaacctgtc
     4621 cggcatcggt cagtgcgctg cacgcggcgg ccttgttgat gcgttttgcc aagcccgcca
     4681 acactttgcc cgggccgcat tcggcggatt cggcaatgcc gtctgaaaca agggcgttga
     4741 cggtttctgt ccagcgtacg gggctgtaaa gctggcggac gagcgcgtct ttgattttgt
     4801 cggcatcatc gtaggcggca acgtcggcgt tgtggatgac gcggatttgc ggctgcttga
     4861 tttcaacggt tttcagggct tcggcgagtt tgtcggcggc gggtttcatc aggctgcaat
     4921 gggaaggtac ggacacgggc agcggcaggg cgcgtttggc gccggcttct ttggcggcaa
     4981 gcatagcgcg ctcgacggcg gcggtattgc ctgcaatcac gacttgtccg ggcgagttga
     5041 agttgacggc ttcaaccact tcgccttgtg tggattcggc gcaaatttgt tttacctgtt
     5101 catcttccaa gccgagaatc gccgccattg cgcccacgcc ttgcggtacg gcagactgca
     5161 tcagttcggc gcgcaggcgc acgagtttga ccgcgtcggc aaaatccaat gcgccggcgg
     5221 caacgagtgc ggtatattcg ccgaggctgt gtccggcaac ggcggcaggc gttttgccgc
     5281 ccgcttccaa ataggcgcgg taaacggcaa cgccggcggc gagcatgatg ggttgggtat
     5341 tgacggtttg accgatgatt tcggcatcgc taccgttaat catcgcccac aagtcttgac
     5401 ccaatatggc ggatgcttcg tcaaatgtgt ttttgacgac ggcctgccct gtaaagccgt
     5461 tcatcatgcc gaggctttga gaaccttgtc cgggaaagaa gaatgcaaaa gacatggtat
     5521 tcctttgttt ggttggattg tcagagatgt tgcccgagtt tgacaaaaag ttcgggcgga
     5581 acgaaataat caatcaggat gagggtcgcc aggacattac ctgaaacagt cagacggaac
     5641 agcacaacaa aacgcttttt cgccgtttta tgcctgaata tcctgctgcc caagtatgcg
     5701 cccgctcaac cgccgaacaa ggcaggcagc agcaggcggt gttcgggaat gcggcgtttt
     5761 ccccgcacgg cacgccgttt gtcgatgccg taaagtgcaa acgcatagag ggacaatatt
     5821 gcgtaacacg cgcccaatac ggggaggcgc agcgaaatgg cagacagaaa tgccgcacac
     5881 gcaattggtt tgaagaaagc ctgccgcttc atgatatggg aaataccgtc tgaaaacctg
     5941 cttcagacgg catggtattc aatattgcag caataccgcg ccccacgcga aaccgccgcc
     6001 gatgccttcg agcagcaggt tttgaccgcg tttgatttgt ccgctgcgga tgcccgtatc
     6061 caaagccagc ggaatcgatg cggcggatgt gttgccgtgg tcttggacgg tcaggacgac
     6121 tttgtccata ctcaaaccta aatgtttcgc ggtcgattcg ataatgcggc ggtttgcctg
     6181 atgcggcacg atccagtcga tttgagcggc ggtataaccg gcttcttcga taacgtcatc
     6241 ggcgattttg gacagcattt tgacggcaaa cttgaacacg ccgggaccgt ccatcgaaat
     6301 gtacggcgaa ccggaaactt tgccgcaggc gatttgcccg gggacgttta agagtttcag
     6361 ataattgccg tcggctttga gtttgctgtg gatgatgccc ggtttgtcgg acgcgcttaa
     6421 aaccaccgcg cccgcaccgt cgccgaacaa tacgcaggtt gtgcggtcgt tccagtctac
     6481 aatgcgactg aaggtttccg cgccgatgac cagcgcgttt tttgccatgc cgcttttgat
     6541 gtaggcgttt gccgtggtca gcgcgtacat aaagcccgca cacaccgcct gtacgtcaaa
     6601 cgcggggcag ccgttggtga tgcccagttt ttgttggacg atggtggcgg tagaaggaaa
     6661 ctgcatatcc ggcgttgccg tcgccacaat aattaaatcg atttcgccgc tgtctaatcc
     6721 ggttgcatcc agtgcgcggc gggctgcttc ggcggcaaga tcgctggttt tctcattttc
     6781 ggctgcaata tggcggaact tgatgcccgt acgcgcggta atccactcgt cagaggtatc
     6841 taccttttgg gcaaggtcgt cattgctgac gcggttggcg ggaagatagc tgcccgtgcc
     6901 ggaaattttt gcatactgca tgggaacggc ctttttagag agttggttca gattcggcta
     6961 ttgtaagcga aaaaccgatg attgcccaat acgggcaggg tgcaaatgac ggaaacaggg
     7021 atgggggtgt ggtttgggat acagatggtt ttcagatgca gattgccgtg gacaggcagg
     7081 gcggggttgc cgatacgctg ttttaagcga aggaaatgcc gtctgaaaac caaacatgct
     7141 tcagacggca ttttgattgt tggttttcca tcaaattatt ggtgccggtg tttgtttttg
     7201 tatcataaat tcagaaatta tattttgaat tgtagaaata tttttagaga tatgctcaat
     7261 agggtaggaa tctcccaaga tttcccttgc cttcccgctg taattttctg ttttaaggtt
     7321 tttgacttca atatccccgt cttctaaaat tgtttgaatc attggcaaat aatatccttt
     7381 ttcaaaatag atagttaatt cggtatcgcc aaattccggc tcggggatga ttctgaaaac
     7441 aaggacgccg gcttttttct caaaatttga tacggaaaaa agtgattgat ttccctaatg
     7501 tcaggatttt ccaaaacggg gatttggatt cgctctccgt tgtctgccat aaaaaatccg
     7561 ccaaaaacga ccgtcgatgt tttcatgttt atcaacccat tggctttatt ggttaatcgg
     7621 acgtgctttc tatctcaaat tccttgttga taaaagaaat ttcccgggat tcttgttccg
     7681 tcagccggac atcgaaatct tcgatataag tacacaggat ttcaaaagcc aaaaaacgtt
     7741 ccgaataatg aatataatcc aatgcggatt caatcagacg ggcatcaagc ctgccttcaa
     7801 gggattttcc gaacttcatc atctgtttgt ctagagcttt catccgtttt tctaatgtct
     7861 tcatttttca aatactcctt attttacagg gaagtatttg ggaagtgccg gacaggcgca
     7921 tcgccgtccg cgcccgcagg tttggtgcgg gcggatgccg tctgaaaggg gcgggggcgt
     7981 tcagacggca tcgtgtgtgt tacagaccgt cggcattttc gttttggacg gctttggcag
     8041 tttcgagtgc ggcgagttgt tcggcaacgc cttgttcgat tttggaaagg ccggcggact
     8101 tggcttcgtg gtaggcttct tcgagtgcgt agcggaaacc ggtttcgtct gtgccgccgt
     8161 ggcttttgat gacgatgccg cgcagcccga gcaggatggc cccgttgaat ttgcgcggat
     8221 cgagtttgtt tttcagccct ttgagggcgg gtagggcggc aacggcggca agtttgttga
     8281 acaggttgct ttggaattcg cggcggatgg ctccgctcat gaatttgacc gcgccttcga
     8341 tggttttgag catgacgttg ccgacaaagc cgtcggcgac gacgacatct gcttcgccgt
     8401 acaggatgcc gttgctttcg atgttgccga taaagttgag tttgctgttt tgcagcagtt
     8461 tgtaggtttg tttgacggtg tccgtacctt tgatgtcttc cgtgccgacg ttgaccagcc
     8521 cgacacgcgg ctgtcctttt tgaggatgga gtgcgtggac gagttcgctg ccgataacgg
     8581 caaattgggc gagctgttcg ggcgtgcagt cgacgtttgc gccgaggtcg agggcgaggg
     8641 taacgtggtc ggtgtcggaa ggaaggaatt tggcgatggc ggggcgttcg atgccgggaa
     8701 tggttttgag gacgaaacgt gcggttgcca tgagtgcgcc cgtgttgcct gcggatacgg
     8761 cggcttgggc tttgccttct ttaacttggt tgatggcaac gcgcatggag gagtcttttt
     8821 tgttctttag ggcggactga ggggattcat ccatgccgac aacttgggtg gtatggcaga
     8881 tgtcgatgcg ttccatcggt gcgcctgccg cggtcagggc ttggcgcagt tgcgtttcgt
     8941 cgccggtcat aatcaggcgg acatcggggt gtgcttggag gaatgcggtt gcgccgggta
     9001 cggtaacggc aagtccttgg tcgccgccca tggcatctac ggcaagtgta atcatagggt
     9061 tctccggtag gttttcggtc tgcggcaggg gtcgtgcggg cttcagacgg catcggttcg
     9121 gaaaatatgc cgtctgaaag ggtcagcctc ggccggcctc ggcaaggcgg ttgtgttcgt
     9181 cgatgtcgag tgcgtcccac ggatagttga tccaccagtc ttctacggtg atgccgctga
     9241 aatagggaat gccttcgggg attttgcctg ctttggcttt gattttttcg tgcagtacgg
     9301 cgacgccgat cgtaccgaag tcttctttga gcagctctgt caggcaaaat tccatggtta
     9361 cgcggctgtc gtccacttca tcgacgacga gtacgttttt gccccgcagg gcttcgggaa
     9421 cggggtcgag ccattggact tttttgactt cttctgtaac ctgtccttcg ttgtcgctgt
     9481 cgtaataggc ggtggttacg gcataaatcg gaatttccag aaaacagcgc agcatacgtg
     9541 ccggaataaa gccgccgccg ccgatggcaa tcatggcatc gtatttgatg tcggcgttcc
     9601 ggattttttc tgccaatgct ttgatgacgc ggtggatgtc atcgtaggtg taccagattt
     9661 tctgtttcat cggaatttcc ttggtggttg gggcttttgg aatattttca cgggttatta
     9721 tacggaacgc tttgcccctg tgtgttgacg tatggcgaaa gtttggacgg atggtgcgtc
     9781 caatgcaaaa aaagccagta attgcatggc aatgttctgg ctttttcagt cagtcgaata
     9841 gggattattc gcctttggct ttgaccactt tgcggccgcg gtacataccg ttgggggaaa
     9901 tgtggtgcgg gcggtgtact tcgccggttg tgctgtcgac agacagtgcg ggcgcggtca
     9961 gcgcgtcgtg cgaacggtgc ataccgcgtt tggaagggga ttttttgttt tgttgaacgg
    10021 ccatttcaag ctcctagata aataaactgt gtcctaatca attgcttttc aaacctgcca
    10081 aaacagcaaa ggggttgggt ttgtcccgat tgacttcttc cagtgtccca ttgtcgccgc
    10141 agtcttcgtg tcgcggcgaa aagggcaggg acatcaggat ttggtcttct accaatgtgc
    10201 gcacgtcgag ttctttttca atcagtatgc cttcgagttc ttcgtcggca agcatggatt
    10261 cgtccaagga ctcttcgttg gaaaacagga cgatacggct gctttcatca agcatgaacg
    10321 gcatgggttt gatacatctc tggcaaatca ggggcatatc ggctttgacg ttcaggtcga
    10381 ggaacaggcg ttgcagccgg tcgcgaccgc cggtcagtgt aaacgatatt ttggtctgcc
    10441 tgtcggcggg ataatcgtgc gaactgacgc gttcatccaa ttcttccagc agaaaactgc
    10501 cttgcaggtt ctgcccttcg gcggcaaaaa tttccgagtc aatcaaatta gggtctgaca
    10561 taaacgggat atgatataat ttagatgttc taacgtcaat atttttaaga aaaatgttgc
    10621 ggtacgccga aggcgggtat ccgtgtttcg gcgcatggct ggattttact gccccttcgg
    10681 gcgtgttttc aacggtaagg aggatgggat gggtttggaa ctgcctttga ttttgggtac
    10741 gagttcggtt ttccgccgcg aacagatgga aaggctcggc attgcctttc aggcggcgtc
    10801 ccccgatttt gacgaaacgc cgatgttggg ggaatccgcc cctcagacgg cattgcgcct
    10861 tgccgagggt aaggcgcggt cgttggccgg gcgtttccca gaggcgttga ttgtcggtgc
    10921 ggaccaggtg gcgtggtgcg acggcaggca gtggggcaag ccgatgaacc ttgctaatgc
    10981 gcacaagatg ttgatgcatt tgagcggcag ggagattgag ttttacagcg cggtcgttct
    11041 gctaaatacg gttacgggca ggatgcagcg gcatatcgat aagacggtgg tcgtgatgag
    11101 gaagttggac gagctacaca tcctccgcta tttggagcgc gagcctgatg cggtttattg
    11161 ctcgtgtgcg ttgaagagcg aggctttggg tgcattgttg atcgaaagga ttgagagtac
    11221 cgatccgaat gctttaatcg gtttgccggt tttccgtctg gttgattttt tgaaaaatga
    11281 gggcgtggag gttctgtaac tgcccgttta tgccgtctga agggttcaga cggcattttt
    11341 aaccgatgag tgagggaatg gtgtctcctg ttttgtattt gattcctacg cctttgggta
    11401 cgcctgacac gccgtgcctg ttgccgcatg aacaacaggc gattgtcggg ctgacggatt
    11461 ttgtcgtgga agcggaaaaa acggcgcgcg cgcatttgaa acatttgggc gtgacaatgc
    11521 ctatccgcga actgaatttg caaacgctga acgaacacac ggatttgaag actttgccgg
    11581 aattgctgaa acctttgcaa gaagggcgca gtatgggcat tgtcagcgag gcgggttgcc
    11641 cggctgtggc tgatccgggt gcgaatttgg tggcattggc gcataaacac ggttttgaag
    11701 tacggccttt ggtcggtccg tccagcttgt tgctggcgct gatggcttcg ggtgcgaatg
    11761 ggcagaactt tgcgtttaag ggttatttgc cgtctgaaaa aaatgagcgg attcagagtt
    11821 tgaaggcttt ggaacaacgt tcgcgccagc agaatgaaac gcagctgttt atcgaaacgc
    11881 cgtatcgcaa cgatgtgttg ttggcggatg cggtggaaaa cctgcatcct gaaacgcgct
    11941 tgtgcacggc tacggatttg acgttgccga ctcagtcggt ggtcagtaaa acggttgcgg
    12001 attggcgcag gatgaaggaa atgcccaatc tgaaaaaacg cccgacgatt tttgtgatgt
    12061 atgcaggttg aagatttccg ccccgatagg gggtgaacaa taaaaatgcc gtctgaacag
    12121 gtttcagacg gcatttttca tgctgcggca tttaggaaac gacttcgcct tgggtgcgtt
    12181 gtttttcgat gctgcggttg atgtgccatt gctgggcgat ggtcaggagg ttgttgacta
    12241 cccagtacaa taccagaccg gcagggaaga agaagaacat gacggagaaa accaacggca
    12301 tgattttcat cattttcgcc tgcatcgggt cggtcggcgg cgggttcaga taagtttggg
    12361 cgaccatcgt tgccgccata atgatgggca ggatgtagta ggggtcggcg cggctgaggt
    12421 cggtaatcca acccagccaa ggtgcctggc gcaattctac ggaggcgaac aatgcccaat
    12481 acaatccgat gaagacgggg atttgcaaca gcataggcag gcagccgccc agcgggttga
    12541 ttttctcgtc tgtgtaaagc tgcatcatcg cctgttgttg cgccatgcgg tcatcgccgt
    12601 atttctcttt gattgcctgc agtttgggcg cggcagcacg cattttcgcc atcgaacggt
    12661 aggacgcgtt ggtcaatgga tacagtacgg ctttgacgat gatggttaaa acgataatcg
    12721 cccagcccca gttgccgatg atgttgtgca gttggttcag gagccagaag agcggggaag
    12781 cgaaccagtg tactttgccg tagtctttgg ccagttgcag gttgtcggcg atgtttgcga
    12841 taacggatgt ggtctgtggg ccggcgtaga ggttgatgga ggcttcggct ttcgcgccgt
    12901 tttggatggc ggctaaaggc acgctgacgc tggtgctgta cagcttgtcg ttgcggcgtt
    12961 tgatgtcgat acggcagtcg ccagcggcgc aaacgctttg tccgcctttg ggttggagga
    13021 tccaggtgga catgaagtgg tgttcaatca tgccgagcca gccggtcggg gttttgcgga
    13081 tgtattcggc ctcggatttg ccggatttgg catcgtcgtc caagtcggag aagctgactt
    13141 tttggaagtt gccttcaggg gtataaacaa cagggccgac gtaagagtgg gtaaagtagc
    13201 cttgaccctc gggttcgctg tggtcgcgga cgatgcggta gtccgcgctc aggttggcgg
    13261 tttgaccgct gccgttggcg atgtcgaagc ggacgttgac cagatagctg cctttggtga
    13321 aagtataaac tttgtcgatt ttcagaccgc gtgtttcagg cgcgctcagg cggacttcaa
    13381 ctttgtcgcc ttccaagctg tactgttttt tcggtgcgct aaagccgatg ccttttagaa
    13441 tgttgttgcc ctgcgcgtcc aaaagttcgg attgggcgac gtaggtgtat tctttgccgt
    13501 cgccaaacag gatgaacggt ttattttcgt cgccggttgc tttgtatttg agcagggtca
    13561 gccggcgcag gtcgccgctt ttttcatcaa tgacggcttg aaccgtgtcg gtcgttacgg
    13621 taatcggcgt tgcgggcgcg agcgcggctt cggcggaagc ggttacggcc tgttgttgtg
    13681 ctgcctgttg gggcgcgggg acgggcttcg gagtggggaa catcttttcc catccgatca
    13741 taatcaccag tgcgatggcg aaaaacgccg tgagtctttt aaaatccata agagtttcct
    13801 gaatggtcgg aaatgccgca ggttgcgtgt tccgatagac ggggaataag ggtgggcttc
    13861 atacccgacg gtcgtgccgc cagcccgaag tttcagacgg cattatatag aaaccgatgg
    13921 gaaataaaag gaaagcgtgc aatttgaata ttgcgtcggg tcagggaacg gggtcgtgtc
    13981 cgtgtccgcc gaaagggtgg cagcgtgcaa tgcgcttgat ggcgagccgg ccgcctttga
    14041 atgcgccgta ttttttgacc gcttcgaccg cgtattgcga acaggtcggc gtataacggc
    14101 agcgcggcgg aatcagcggg ctgatgcaat attggtagaa ccgtatcagt cccagcagga
    14161 gtttggacaa tagaaagttc atcgggatgt tccttgtatg ggaaacccgt tgccgtctga
    14221 accttgcctg cagagtaccg ttctaatcat acctgtttcc cgcatccggt tgcggggttg
    14281 ccgaacatga gttgtgccag ttccgccctt gcctgttttg cggtagacct gtcgaattta
    14341 cggtggacgc gcacgacgaa atcttgcggc ggcagccggt ttttgttcaa tctaaaccag
    14401 tcgcggataa cgcgcttcat ataatttcgt tcgttggcgc gtttggcggt ttttttgccg
    14461 accaccagac cgatgcgggg atggtccagc ccgttgccgt ttgaacgcga aacttgcagc
    14521 aggtcgcggc tgcggcggtt tctgaatgca aaaacggatg aaaaatcatc cgtttttaac
    14581 aagcggtact gccttccgaa gcggtagtcc aaaattatac cgctaggcgt ttgcggcctt
    14641 tggcgcggcg tgcagccaat actgcgcggc cgccgcgtgt tttggagcgc accaggaagc
    14701 cgtgggtgcg tttgcgtttg gtaacggaag gttgataagt gcgtttcatg atgtttccta
    14761 aaatagaatg ggtagataat taaaccgtga attacactcc aatttgccgc ttttgtcaat
    14821 caatatagaa actttgcagg aggattgccc gattgcctgc ggatttctgc cgcctttctg
    14881 tggataaatt tttgcacggg ttgtggataa aatattcgtg agtcggtata atcgggcagt
    14941 cgcgttttga accgatgcgc gttcaacaga tttgttttct ttttgaaaat attatatttt
    15001 ctttgttttc gatttcattt ttaccgattc gagcctatcc atgacattag cagagttttg
    15061 gccgctgtgc ctccgccgtc ttcacgatat cttgcctcaa gggcagtttg cgcaatggat
    15121 tgcgcccctt accgtcggtg aggagggtgg cgtatgggtg gtgtacggca agaaccagtt
    15181 tgcctgcaat atgcttaaga gccagtttgc cgggaaaata gaagcggtga gggaagagtt
    15241 ggctgctggc cgttccgcct tcgtattcaa accgggagaa ggcgtgcgtt atgagatggc
    15301 ggcggttgaa agtgctgtcg aacctgctga gccgtccttg catgcggtgt cggaggaaat
    15361 gcccgtgcag gaggttctgt tggacgagct gccgtctgaa gggtctgcca aatccgtaca
    15421 ggcgaaaacg gcggcggata ttttggcgga acgtatgaaa aacctcccgc atgagccgcg
    15481 ccatactgcc gggtctgctt cccgtccgga atcggaggta cttgcgaaag cgcggacgga
    15541 tgcgcagcgt gatgcggaag aggcgcgtta cgaacaaacc aacctgtctc cggattacac
    15601 atttgatacg ttggtagaag gcaagggcaa ccgccttgcg gcagctgccg cgcaggcgat
    15661 tgcggaaagt ccgggacaga gttataaccc gttcttcctc tatggcagta cgggtttggg
    15721 taaaacccac cttgtgcagg cggtcggcaa cgaactgttg aaaaaccgtc ccgatgccaa
    15781 agtgcgctat atgcattcgg acgactatat ccgcagcttt atgaaggcgg ttcgcaacaa
    15841 tacctacgac gtgttcaagc agcaatacaa gcaatacgac ctgctgatta tcgacgacat
    15901 ccagttcatc aaaggcaaag accgtacgat ggaggaattc ttctatctgt acaatcattt
    15961 ccataacgag aaaaaacagc tcatcctcac ttgcgatgtt ttacccgcca aaatcgaagg
    16021 tatggacgac cgcctcaaat cccgtttttc atggggactg actttggaac tcgagccgcc
    16081 cgaattggaa atgcgtatcg ccattttgca gaaaaaggcg gaagcggcgg gcatcagtat
    16141 tgaagacgaa gccgcgctgt tcattgccaa tctgatccgt tccaacgtgc gtgagcttga
    16201 aggcgcgttc aaccgcgtcg gagcgagcag ccgctttatg aaccgtcccg tcatcgacat
    16261 cgatttggcg cgtaccgctt tgcaggacat tattgccgag aagcacaaag tcatcaccgc
    16321 cgatattatt attgatgccg ttgcgaaata ttaccgcatc aaaatcagcg atgtgctcgg
    16381 taagaaacgg acacgaaaca ttgcccgtcc gcgccaggtg gcgatgagcc tgaccaaaga
    16441 actgaccact ttgagcctgc cgtctatcgg cgattcgttc ggcggacgcg accatacgac
    16501 cgttatgcac ggcatcaggg cagtggcgaa actgcgcgaa gaagatccgg aattggctca
    16561 ggattatgaa aagctgctga ttctgattca aaactgatgg aaaacgtttt cagacggcat
    16621 gatattgccc atgccgtccg aagggtaaaa aatccaaccg atttaaggag cgaaaatgtt
    16681 gattttacaa gccgaacgcg acagcctgct caagccgctg caagccgtta ccggcatcgt
    16741 cgaacgccgc cacaccctgc ccatcctgtc caacgtcctg attgagggaa aaggcggtca
    16801 gaccaaactc ttggcaaccg atttggaaat ccaaatcgac actgcgggtc ccgagggcgg
    16861 cgcgggcgac ttccgcatca ccaccaatgc caagaaattt caggacattt tgcgcgcgct
    16921 gcctgccggt gcgctggtgt cgctggattg ggacgacagc cgtctgacgc tgaaggcggg
    16981 caaatcgcgt tttgccctgc agaccctgcc tgccgccgat tttccgatga tgaatgtcgg
    17041 cgaggacatc agcgcgactt tctcgctgga gcaggagcgt ttcaaaacca tgctgtcgca
    17101 agtgcagtac agcatggcgg tgcaggacat ccgctattat ctcaacggtc tgctgatgca
    17161 ggttgagggc agccagttgc gccttgtggc gaccgacgga caccgccttg cctatgcagc
    17221 ctgcgcgatt gatgcggatt tgccgcgcgc cgaagtgatt ttgccgcgca aaacggtgct
    17281 ggaactgttc aaactgttga acaaccccga cgatccgatt caaatcgagc tgctggacaa
    17341 acaggtgcgt ttccaatgca acggcacgac catcgtcagc aaggttatcg acggcaaatt
    17401 ccccgatttc aaccgcgtga ttcctttgga caacgacaag attttcgttt tgtcccgtgc
    17461 cgaacttttg ggcgcgctgg aacgtgtgtc cattcttgcc aacgaaaaat tccgtggcgc
    17521 gcgcctgttc ctgcaatccg gcctgttgag cgtcgtgtgc agcaacaacg agcaggaaga
    17581 agcgcgcgaa gaaatcgaga ttgcctatca gggcggcgaa ctcgaagtcg gtttcaatat
    17641 cggctatctg atggacgtgt tgcgcaacat ccattccgac gatatgcagc ttgccttcgg
    17701 cgatgccaac cgctcgacgc tgtttaccgt gccgaacaat ccgaatttca aatatattgt
    17761 gatgccgatg cggatttgac ggttttccgg agcacgatgc ccgtattgga gatatgcccc
    17821 gaaccgtgca gacggattcg gggttttgtt cggctgtcgg aaaggcaatg ccgtctggaa
    17881 tgcggcggat tggggttggg agcgtatagg ggaagtgctt atgcggaaat ggcgaaggtg
    17941 tgtttttgac tccggtccgc cctgtttaga ttgctgtaaa accatgccgt ctgaaacgga
    18001 aaggtttcag acggcatggt ttttgattgg ggcggtgcgg ttcagcctcc gagcagtgtc
    18061 cacaaatcgt tttgcagatc ggcttcgctt tcgccctcgg cgggcgcggc gcggatatag
    18121 ccgccgtcgg gctgcatcag ccatgcgtgg gtgttgtcgt ccagtgccat ttccaaacct
    18181 tcgcggatga cgcgtttttt gagttcgggc gcggtaatcg gcgcggcggt ttcgatgcgg
    18241 cggaagaagt tgcgccccat ccaatccgcg ctggagataa aggtatcgtc cgcgccgttg
    18301 ttgtggaagc aatacacgcg cgcgtgttcg agctgcctgc cgatgatgga gcggacgcgg
    18361 atgttttcgg acaagccttt tacacccggg cgcaaggtgc acataccgcg cacaatcaaa
    18421 tcgatttgta cgcctgccgc gcttgcccga tacagggctt cgatgacggt cggttcgatg
    18481 agcgaattca tcttggcggt aatccgcgcc ggtttgccgg cttttgcgtg ttcggtttcg
    18541 cgtgcgatgc ggtcgataac cattttgtgc agggtaaacg ggctttggta gagtttgttc
    18601 agccgcccgg gtttgcccaa gcctgtgatt tccataaaca atgtgttcac atcggcggtg
    18661 atttgttcgt cggcggtaat gatgccgaag tcggtgtaga tgcgcgatgt gccttggtgg
    18721 tagttacccg tgccgaggtg ggcgtaacgc ttgagtacgc cgtcttcgcg gcggatgacc
    18781 agtgccatct tggcgtggac tttgtagccg aacacgccgt acacgacgtg cgcgcccgcc
    18841 tcttcgagct gcttcgccca gttgacgttg ttggcttcgt caaaacgcgc catcagttcg
    18901 acgacgacgg ttacttgttt gccggcgagt gccgccttca tcagggcgcg gacgagttcg
    18961 gaacgcgtgc cggtgcggta aatcgtcatt ttgacggcaa gcacgtcggg gtcggcggca
    19021 gcttcgcgca tcatttcgac aacggggtcg aacgattggt aggggtggtg cagcaggatg
    19081 ggcgattggc gcaccaaatc gaatatggac gcggttttgc ccaaggcttt cagtctgccc
    19141 ggcgtgtgtg tgggaaattt caaatcgggg cggttgacta ggtcggggac ggcgttgagg
    19201 cgcacgaggt tgaccgggcc tttgacctga tagagttcgg cggcggtcag tttgaattgc
    19261 gcgagcagaa agtcgcggat gtaggaggga caggtgtcgg cgacttcgag ccgcacgccg
    19321 tcgccgtatt cgcggtcgtg cagttcgttt tgaatggcgg cgcggaggtt ttgtacgtct
    19381 tcttcgtcaa cggtcaagtc gctgtcgcgc gtgaggcgga actggtggca gcctttgacg
    19441 ttcatgcccg ggaagagttt gccgacgtgg gcgtgcagga tggaggagag gaagacgaag
    19501 ccgtgtccgc cgccacacag ttcggacggc aggggaacaa cgcgcggcag gatgcgcggt
    19561 gcctgcacaa tcgccatccc cgaaggcctg ccgaacgcgt ccgtgccgtc gagttcgacg
    19621 gcgaagttga gcgatttgtt cagcggtcgc gggaaggggt gggacgggtc gagtccgatg
    19681 ggggtcagaa tcggcagcaa ttcgcggtcg aaatagcttt cgatccactt tttctgcgcg
    19741 cccgtccagt tgcggcggcg gtaaaaatgg atgccttctt gtgccagctc gggctgaagg
    19801 acgttgttga acaggtcgta ctggtgccgt atcagggagc gcgccgcttc ggtaacgtcg
    19861 gcgatggttt cagacggcat tttgccgttg tccagcctgc gccgggggtg cagcttgttt
    19921 tcacgcttga gccacgccat gcggacttcg aaaaactcgt caagattgga cgacacgatg
    19981 cacaggaagc gcaggcgttc caaaaggggg acgtttttgt cttccgcctg tgccaacacg
    20041 cggcggttga atgccagcag gcttagttcg cggcagagga tgcggttttg ttcgggcata
    20101 aggttctccc aaagatggtt gttgttcggt cggagcgggc aggcaatgcc gtctgaaggc
    20161 ttggcggcat ctgcgccggt ttcagacggc atgacgtggc ggacagtctg tttcaggcat
    20221 cggggcaatg tgaaaacaga taccggcgcg tgcggtatcc gtctgtttca aatcacttcc
    20281 aacacaaaat aatgacgcag tttttcgtac accgcatcgc tgacgttgat gcagccgttg
    20341 gtcataatcc tgtcggacac ggacggggag gcgatgcgtt cgttccgcct ttccgacggt
    20401 atctgattcc aaacgcggtg cagggcgaaa agaaaatcac cctcctgctt gaaaccgatg
    20461 acttcgccgc cgtatccagg cttgtcggta ctgttcagcg tcagcccgaa cgtccccttg
    20521 ggcgtggcaa caccgatgag gacggggtgg cactgcctgt catcggcaaa acagagttcc
    20581 gctttggatg tgtttacgat gacttttttc ttttgaatat aagcgttgac cgcatccggt
    20641 tgcccctgtg catatacggg ggcaaccatc gataggtcgc acaatatccc taaaaacagg
    20701 cggaacggca tgtcggatta ttggcggata cgtttcggtt ttgccggcac gatttcgcgg
    20761 atgatgactt gcggctcggc tttgggtgcg ggcggcggac aggcggcatc tttcgggaag
    20821 acggggttcc agtagaagct gcgggcaaat ttgtctttat cgaaaatcac tttgtattgg
    20881 caggtagtaa catcttctac gccggacgtg ttttcagggt cgatacctac gcccggggta
    20941 tggaagtgga acaggtaatc ccattcgtgt acgccgtaca tgccttcgtc gtaatgcggg
    21001 cgacccagga ttttgtagat gtcgtctttg gtcaggccgg ggcgcatctg atccagttcg
    21061 tcataggtcg ggaatgtgcc gcgcttgttg tcgagcgtta cggaataggg tttcgggaaa
    21121 accggattgt cggtcgctcc gtcggctttg acgttgcttt tggttgcgca ggcagacaga
    21181 atgcccgccg ccaatactgc caagcccggt ttgacgattt gtttgatttt catatgcaga
    21241 atcctttttt acccgatgcc cgtctgcctt ttgttcggaa gagccgcatc aggagagttt
    21301 taaacatttg attttggttt gtaatattag cataaaaaac gtgcgtatca gtaaacgcgg
    21361 tgtatttgta cggcatacgg aatgatgcgc gtgcgaattt acgcatcctg ccggcaattt
    21421 gccgattcgc cgacatcggc aacctgttat aattcctcct ttaaattcct aacgttttca
    21481 agcgaaaaac agaatgacta tgcaagaaca atatcaaccc gccgccatcg agcctgcggc
    21541 gcagaaaaaa tgggacgacg cccgtatttt caacgtctcc gaagacgctt ccaaacccaa
    21601 atactactgc ctctccatgt tcccctaccc cagcggcaag ctgcatatgg ggcatgtgcg
    21661 caactacacc atcggcgacg tattgagccg cttcaaactt ttaaacggct tcaacgtcat
    21721 gcagcctatg ggttgggacg cgttcggcat gccggcggaa aacgcggcga tgaaaaacaa
    21781 cgtcgcccct gccgcttgga cgtacgataa catcgaatac atgaaaaccc agctcaaaag
    21841 cctgggtttt gcgattgact gggcgcgcga aaccgcaacc tgcaaacccg aatactaccg
    21901 ctgggaacaa tggctgttta ccaagctgtt tgaaaaaggc atcgtttatc gcaaaaacgg
    21961 cacggtaaac tgggacccgg tcgaccaaac cgtccttgcc aacgagcaag ttatcgacgg
    22021 acgcggttgg cgttcgggcg cgttgatcga aaaacgcgaa atcccgatgt attacttcaa
    22081 aatcaccgat tacgccgaag agctgctcaa cgacttggac aagctggaac actggcctga
    22141 acaagtcaaa accatgcagc gcaactggat cggcaaatct cgcggcatga ccgtgcgctt
    22201 tgctgtttca gacgacagca aacaaggctt ggaaggcgat tacgcgaaat tcctgcaagt
    22261 ttataccacc cgccccgaca cgctgatggg tgcgacttat gttgccgttg ccgccgagca
    22321 tccgctggca gccgccgcag ccgccgacaa acccgaattg caggcattta ttgccgaatg
    22381 caaagccggt tcggttgccg aagccgatat ggcgacgatg gagaaaaaag gcgtgccgac
    22441 cggtcgctac gtcgtcaacc cgctcaacgg cgacaagctg gaagtgtgga ttgccaacta
    22501 tgtattgtgg ggctacggcg acggcgcagt gatggcggtt ccggcgcacg acgaacgcga
    22561 ttttgagttc gccgccaaat acaatctgcc taaaaaacaa gtcattgccg tcggcgacaa
    22621 cgcattcgac gcaaaccgat ggcaagaatg gtatgccgac aaagaaaacg gcgtattggt
    22681 caacagcggc gacttggacg gcttggattt tcagacggca ttcgatgccg ttgccgccaa
    22741 gctgcaaagc caaggcgcgg gcgaaccgaa aacccaatac cgcctgcgcg actggggcat
    22801 ttcgcgccaa cgctactggg gctgtccaat tcccatcgtc cattgtgaaa aatgcggcga
    22861 cgtacccgtc ccagccgacc aactgcccgt cgttctgccc gaaaacgtcg tacccgacgg
    22921 catgggttcg ccgctggcaa aaatgcccga gttttacgaa actgcctgcc cgtgctgcgg
    22981 cggcgcggcg aaacgcgaaa ccgacaccat ggacaccttc atggaatcaa gctggtattt
    23041 cttccgctat atgtcgccca agttttcaga cggcatggta tcggcagaag ccgcgaaata
    23101 ctggggcgcg gtcgaccaat acatcggcgg tatcgaacac gcgattttgc atctcttgta
    23161 cgcgcgtttc ttcaccaaac tgatgcgcga cgaaggtttg gtcaatgttg acgaaccgtt
    23221 caaacgcctg ctcacgcaag gcatggtcgt ctgcgaaacc tactaccgcg aaaacgacaa
    23281 aggcggcaaa gactggatca accccgccga tgtcgagctg acgttcgacg acaaaggccg
    23341 ccccgtttcc gccgtcctca aagccgacgg cctgcccgtc gtcatcagcg gcacggaaaa
    23401 aatgtccaag tccaaaaaca acggcgtcga tccgcaagaa ctgattaacg cctacggcgc
    23461 ggacaccgcc cgcctgttca tgatgtttgc cgcaccgccc gaacagtccc tcgaatggag
    23521 cgacagcggc gtcgaaggcg cacaccgctt cctgcgccgc ctgtggcgca ccgtttacga
    23581 atacctgaaa caaggcggcg cggtcaaagc gttcgcaggc agccaagatg gtttgtctaa
    23641 agaactcaaa gacctgcgcc acaaactgca ttccactatc gccaaagtca gcgacgacta
    23701 cggccgccgc cagcagttca acaccgccat cgccgccgtg atggaattgc tcaaccaata
    23761 cgacaaaacc gacaccggca gcgaacaagg ccgcgccgtc gcccaagaag tattggaagc
    23821 cgccgtacgt ctgctgtggc ccatcgtgcc gcacatctgc gaaaccctgt ggagcgaatt
    23881 gaacggcgcg aaattgtggg aagcaggctg gccgacagtc gacgaagcct ccttggtcaa
    23941 atccgaaatc gaagtcatgg ttcaagtcaa cggcaaactg cgcggaaaaa tcaccgtcgc
    24001 cgccgacgca tccaaagccg acctcgaagc cgccgcactc gccaccgagg gcgcagtgaa
    24061 attcatggaa ggcaagcccg ccaagaaaat catcgtcgtg ccgggcagac tggtgaacat
    24121 cgtcgtctaa ccgcttttaa ggtttagcca cacggataaa ggccgtctga aacttggaaa
    24181 cagggtttca gacggccttt ttaaggcaga tggagttgat aagtccaata acatattgga
    24241 atggaaaggt tctattggat ttagactcac tctacacacg cccccaaata taaatccatt
    24301 gtattcctca cgatgttttg gcacaattcc aagccaatca accacgcttg tactcggcat
    24361 cctaatggct tcaaaacctt ttctaaaatg ggcaggcggc aaacataaac ttgtcccctt
    24421 tatcgaacac aatctaccta ctcccacacg aaaacgcctg attgaaccct tttgcggttc
    24481 tgccgctttg tctcttgcat tggatttcga acaatatctg ctcaatgata ttaacgctga
    24541 cttaatcggc ttattccgta tcctaaaaga agaaaaatcc ggattcatcg actacgcccg
    24601 ctctttcttt atttccgaaa acaatagcga ttcaagattc tatgaattgc gggaacaatt
    24661 caacttcagc aaaaatctgc acgaacgctc ggcactattt atttatttga accgtcatgc
    24721 ttttaacggt ttatgccgtt acaacagcaa aggggtattc aatgtgccgt tcggacgcta
    24781 caaatcgccg tactttcccc aacaagaaat ggaaggtttc attcagaaat ctgacagagt
    24841 tgaattaatg tgcggagatt ttcaaatgat tctatctcag acagacaata ccgatacggt
    24901 ttattgcgat cccccttacg cgcctttaag cccaaccgct tcatttacca cttatgccaa
    24961 agaaggtttc aatttagaca atcaaatccg tcttgcccag tcagcccaac aaattgcgcc
    25021 cgattcccaa ggcgttttga tttcaaatca tgatactgaa ttcacaaggg atatttattc
    25081 ttttgctatt ctgaaaacaa ttgaagtaca acgcaatatt gccgcaaaag gcagcagccg
    25141 taaaaaagtc ggagaattat tggcaattta tgattgattt tgacaaaccg gctgaagaag
    25201 acgccattta tcaaagtcgt ttgaaaaaaa tcgtttcaga cgaccttgtc ctctacaacg
    25261 aaaattccct taacgtcatg cggaagatat tggaaaaata tccaaacggc tgttttgata
    25321 tgattttcgc agacccgcct tactttcttt ccaatgacgg cttcagttgt caaaacggac
    25381 aaatggtttc cgtcaataag ggcaactggg ataaatccaa aggaatggcg gcagatttgg
    25441 aattctacga agaatggctc cgactgtgtt acgccttatt aaaaccaaac ggcacaattt
    25501 gggtttgcgg cacattccat aatatttatt taatcggcta cctgatgcaa actatcggat
    25561 accatatttt gaacaatatt acttgggaaa aacccaatcc tccccctaat ttgtcctgcc
    25621 gtttttttac ccattcgaca gaaacaatct tatgggcaaa gaaaaataaa aaagccaaac
    25681 acacgtttca ttatgaaatg atgaaagcac aaaatgatgg caaacagatg aaatgtgttt
    25741 ggacatttcc tcctccaaac aaagccgaaa aaacattcgg caaacatccg acacaaaaac
    25801 cactcccctt gcttgaacgc tgcatactct cagcttcaaa catcggagat ttaatttttg
    25861 accctttcat gggcagcggc acaacaggcg ttgccgcctt aaaacatggt cggaaatttt
    25921 gtggttgcga actggaagaa gatttttttg aattagcaaa aaaaaggtta gaaaaatgat
    25981 tattggcgga atcggtggtg caaggacaca aacaggactc agattcgaag aacgtacaga
    26041 cttacgaaag ttgtttgaag aaattcccgg gtacgactta agaaaaacat atgataatgc
    26101 gggttatgaa gtttggttca atggagaatt gaaggcttat tgttttaaaa aatatgagtt
    26161 ttaccgattt ttgaaaagac cgggatacag tattaattgg aaagaccatc tgtctaaaag
    26221 attactaccc gacaatggct tatttatcat catccgtgat accttattta ttattgagat
    26281 caaattccaa caaactcccg gttcagtaga tgagaaatta caaacttgcg attttaagag
    26341 aaaacaatat acaaaattgg ttcactcttt aggttggcgg gttgaatatg tctatgtttt
    26401 gaatgattgg tttacaaagc cggaatataa agatgtttta gattatatta tcagtgttaa
    26461 ctgccattac caatttaaca cgattccctt aaggtggttt ggactgcctg atggtgaaac
    26521 aaatgaataa ataccatatt taaaacacag ccgttcaagg tcgtctgaat atcatttcag
    26581 acgacctttc accaatcccc gccgttttcc atctttctgc tattgtgata aagtagcccg
    26641 accttttgtt caaaatacgc ggattccgcg acactgaatg cagcatctgt caaagattat
    26701 ttgaaaacgg tcgagttaga caagtctgcc gacaatgtcg ataccacatc caaaactatc
    26761 cgcagggttt aggcggtatt ccagagtacg gtgtcttatg ctgatgctgt aaacaatgcc
    26821 cgtatagaaa atctaaaacg gttgttgccg accgttatgc cggtttatga gcaaagtgtc
    26881 agaaataagg ggcgcgtta
//
LOCUS       DAWKOX010000006        26765 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.006, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000006 DAWKOX010000000
VERSION     DAWKOX010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26765)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26765)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26765
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.006"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..1200)
                     /locus_tag="WJK78_000179"
     CDS             complement(<1..1200)
                     /locus_tag="WJK78_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ7597160.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGVWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQ"
     gene            complement(1205..1858)
                     /locus_tag="WJK78_000180"
     CDS             complement(1205..1858)
                     /locus_tag="WJK78_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ7597161.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYGDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2009..2299
                     /gene="gatC"
                     /locus_tag="WJK78_000181"
     CDS             2009..2299
                     /gene="gatC"
                     /locus_tag="WJK78_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ7597162.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQNI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAVAPEVRDRLYIVPQVIEE"
     gene            2362..3807
                     /gene="gatA"
                     /locus_tag="WJK78_000182"
     CDS             2362..3807
                     /gene="gatA"
                     /locus_tag="WJK78_000182"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ7597163.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            3804..4736
                     /locus_tag="WJK78_000183"
     CDS             3804..4736
                     /locus_tag="WJK78_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ7597164.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            4779..6209
                     /gene="gatB"
                     /locus_tag="WJK78_000184"
     CDS             4779..6209
                     /gene="gatB"
                     /locus_tag="WJK78_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ7597165.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAESEATIAEIIEKHGLQQMTDTGAIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            6301..7311
                     /locus_tag="WJK78_000185"
     CDS             6301..7311
                     /locus_tag="WJK78_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ7597166.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMDGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILE
                     LHIRRRKNGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQNSSRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(7440..8072)
                     /gene="pdxH"
                     /locus_tag="WJK78_000186"
     CDS             complement(7440..8072)
                     /gene="pdxH"
                     /locus_tag="WJK78_000186"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ7597167.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            8303..9352
                     /locus_tag="WJK78_000187"
     CDS             8303..9352
                     /locus_tag="WJK78_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ7597168.1"
                     /translation="MSKQPTSKRQWRDGVAPSAKKTAKPFKSKARPKDETDKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANILK
                     WAEMLLPGERRRKKA"
     gene            complement(9421..10962)
                     /locus_tag="WJK78_000188"
     CDS             complement(9421..10962)
                     /locus_tag="WJK78_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ7597169.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVSTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVVETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSVGRQASVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMACLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(11573..12928)
                     /locus_tag="WJK78_000189"
     CDS             complement(11573..12928)
                     /locus_tag="WJK78_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ7597170.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPTRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            13125..13946
                     /gene="nadE"
                     /locus_tag="WJK78_000190"
     CDS             13125..13946
                     /gene="nadE"
                     /locus_tag="WJK78_000190"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ7597171.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGVHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(14016..14489)
                     /locus_tag="WJK78_000191"
     CDS             complement(14016..14489)
                     /locus_tag="WJK78_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ7597172.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAELLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQAPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            14791..15123
                     /gene="trxA"
                     /locus_tag="WJK78_000192"
     CDS             14791..15123
                     /gene="trxA"
                     /locus_tag="WJK78_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ7597173.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(15176..16123)
                     /locus_tag="WJK78_000193"
     CDS             complement(15176..16123)
                     /locus_tag="WJK78_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7597174.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            16452..17840
                     /locus_tag="WJK78_000194"
     CDS             16452..17840
                     /locus_tag="WJK78_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ7597175.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGRGERRYKDR"
     gene            complement(18115..18315)
                     /locus_tag="WJK78_000195"
     CDS             complement(18115..18315)
                     /locus_tag="WJK78_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597176.1"
                     /translation="MPSEGLSDGIFAFVRDIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVMPPLGFQTASYRTVKP"
     gene            complement(18329..18883)
                     /locus_tag="WJK78_000196"
     CDS             complement(18329..18883)
                     /locus_tag="WJK78_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597177.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSAHPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            complement(18968..19468)
                     /locus_tag="WJK78_000197"
     CDS             complement(18968..19468)
                     /locus_tag="WJK78_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597178.1"
                     /translation="MNAMPQTAAQNETLHICSIIVDDARDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            19872..21065
                     /locus_tag="WJK78_000198"
     CDS             19872..21065
                     /locus_tag="WJK78_000198"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine/succinyldiaminopimelate
                     transaminase"
                     /protein_id="HEZ7597179.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALADALNTQMHKLWHISNIYTTRPAQELAQKLVKNSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATETIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVCSQGQKLQTALRSLGEQTGVFKQVRGMGLLLGCVL
                     DAPYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLDDEDTAEGLRRLEHVLTEFA
                     AANRP"
     gene            complement(21130..22374)
                     /gene="clpX"
                     /locus_tag="WJK78_000199"
     CDS             complement(21130..22374)
                     /gene="clpX"
                     /locus_tag="WJK78_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ7597180.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIAWQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGKEPELVFES"
     gene            22564..22935
                     /gene="rbfA"
                     /locus_tag="WJK78_000200"
     CDS             22564..22935
                     /gene="rbfA"
                     /locus_tag="WJK78_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ7597181.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKIPELHFKYDESL
                     ERGMNLSALIDQVAAEKPVED"
     gene            22968..23891
                     /gene="truB"
                     /locus_tag="WJK78_000201"
     CDS             22968..23891
                     /gene="truB"
                     /locus_tag="WJK78_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ7597182.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFRAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIVATARAD
                     ISLAEFQTACKALTGDIRQVPPMFSALKHEGKPLYEYARKGIVIERKARYITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLSCDVLVSHFPQTVLNDYAVHMLRCGQRPRFEEDLPSGTPVRVYT
                     EIGEFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            24108..24611
                     /locus_tag="WJK78_000202"
     CDS             24108..24611
                     /locus_tag="WJK78_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597183.1"
                     /translation="MKTVIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNSQPASQPASQPASQPASQPASQP
                     ASQPIIH"
     gene            26312..>26765
                     /locus_tag="WJK78_000203"
     CDS             26312..>26765
                     /locus_tag="WJK78_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ7597184.1"
                     /translation="MANNKTLFDWVEDRKSTLEEIEQTDFFALPEFVERNLKYPFFEW
                     QKSALENFVIFDRASKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPAHSKFLFTEKILQGDQVIPIHKVETFSP"
BASE COUNT         6808 a         7360 c         6682 g         5915 t
ORIGIN      
        1 ctgtattttt tcggcaaacc gccaagcgcg ttcggtatcg gcggtataaa tgcaggcacc
       61 gagcccgaac ggggaatcat tggcaagggc gatggcatgt tcttcgtttt cggcgcgcaa
      121 aatcagggcg gccggcccga atacttcttc tctccagacg cggcaggcag gatttaccct
      181 gtctaaaacc gtcgcgggat aaaaccagcc tcgcccttgt gggatttttc cgccggtcag
      241 gcataccgcg ccgtttgaaa cggcatcttc aacctgcccg tgaaccctgt cccgcaaatc
      301 ttcgcggtgc agcggtgcaa gcgtagtatc gggatgtttg gggtcgccca ttttcaattt
      361 agcgcattcg gcaagaaaca gcgtgataaa acgatcggct gcggcttcgg ttacgatgat
      421 gcgcttggcg gcgttacacg attgccccgc atcgcggaaa cgggaataac aggcttctgc
      481 ggcggcacgc tccaaatcag catcgggcat cacgataaag gcgttgctac cgccgagctc
      541 caacacggtt ttcttaaggt ttgcgcccgc gtgtgccgca aggatgcgcc ccgtatgcgt
      601 tgaaccggta aacgccattg catcggtatc ttcaaccgcc ttgagcgtgc ccgcctcatc
      661 cagccacacg cctgccagag gaatgccgtc tgaagccaaa tcgaacagtg cctgactgac
      721 gcgtgccacg ctgggcgcgg gtttgacggc gcacgcgttg cccgcgcaca tagcgggaac
      781 ggcgaaacgc aatacctgcc agacgggata gttccaaggc atgacggcaa acaccacgcc
      841 caaaggctcg aagcgcacct gactcaaact cgcctgcgtc gcgatggttt tgtgggcaag
      901 cagttcgggg gcaaggcggg cgtaatagcg tatcagttcg atagacttgc cgatttccgc
      961 acggcattcg tgcaagcagc gtccgacttc ctcacacacc atttccgcaa aacgctcttt
     1021 ctccgcctcc aaacggtcgg caaatttttg caggcgcgcg gcacgttcgg ttacgcccag
     1081 ttgcgcgaac gccccgccgc gcattttcaa atccgccagc cgccgttcaa actccgcata
     1141 atcttgagct ggacggcggt aaagcgtttc gcccgtaaat acattgacac tgtgaaacat
     1201 cgaatcaacc tgccagttgc gggaatatcg ttttcagtcc cgacacaata atctccaccg
     1261 ataccgccgc cagcatcata cccataatgc ggtttaaaat cgtcagcccc gtcgcgccca
     1321 gcaggcggct gaccttcccg gcaacgatta aaatggcata acaaatcgca ctgaccacca
     1381 aaccggccgc gataatcaac gcgatgtcgc cgtatgtttt agccgccgaa gcgtaaataa
     1441 tcacggtcga aataccgccc gggccgatgg tgatcggtat ggcgatgggc acgacggcaa
     1501 tcgctccggc attgcgggcg gggcgcgcct gccccgtttc cggctgcgcg ccgagattct
     1561 gcttggcggg attgtcgttg ccgttcatca tagaaatggc aatcagcaac accaaaattc
     1621 cgccgccgac ctgaaacgaa ccgacgctga tgcccaaaac cttcagcagc gtaccgccga
     1681 tcagcgcaaa taccgcaatc acggcaaaca cggcaacggc ggccgtccgc gcgaccttcc
     1741 tgcgctcctt cgtgctgtgc ccgttggtca ggtcaaggta aagcgacaac gcgctaaacg
     1801 gattgatcag caccaaaaaa gccacaatca gcttgccgat ttccatgccc aatcccatta
     1861 tttccccctc cttcaaaccc gtgcggcagg catccgatgc tgcaaattgc cgccgcaacg
     1921 gatttttccg ttataattaa aaattcaagc aatacgcccc atcatacccg aacgacggta
     1981 tctttaccat cagacaagga tgcttttcat ggcactgaca cttgccgacg tagacaaaat
     2041 cgcccgactc tcccgactgc acctgactgc ggaagaaaaa gaaaaatcgc ttcaagaatt
     2101 aaacgacatt ttcactatgg tcgaacagat gcagaacatc aacacagacg gcatcgaacc
     2161 gatggcgcac ccgcacgagg ccgccctgcg cctgcgcgaa gacgaagtaa ccgaaaccga
     2221 ccgcgccgcc gaatatcagg cggtcgcacc ggaagtacgc gaccgcctgt acatcgtacc
     2281 gcaagttatc gaagaataat ccgaatacgc ttcagacggc atcagcaata ccgcccgaag
     2341 ccctttaagg atggaagatt tatgacccaa tacacattga aacaggcaag cgtcctgttg
     2401 cagtccaaac agatttccgc cgtcgaactg gcaagcgcat accttgccgc catcgccgaa
     2461 aaaaatcccg ccctcaacgg ctatatcacc atcgaccaag ataaaaccct tgcagaagcc
     2521 cgtgccgccg acgaacgtat cgcgcagggc aacgcctccg cgcttaccgg cgtacccgtc
     2581 gcctacaagg atattttctg ccaaaccggc tggcgcagcg cgtgcgcttc caaaatgctc
     2641 gacaacttca tctcccccta caccgccacc gtcgtccaaa acctgctcga cgaaggtatg
     2701 gtaacgctcg gccgcaccaa tatggatgag ttcgctatgg gttcgaccaa tgaaaactca
     2761 ttctacggtg cagccaaaaa cccatggaat cttgagcacg tccccggcgg ttcgtcaggc
     2821 ggttccgccg ccgtcgttgc cgcgcgcctc gcccctgccg cgctcggttc ggacaccggc
     2881 ggctctatcc gccaacccgc atcgcactgc ggcattaccg gcatcaaacc cacatacggc
     2941 acggtttccc gcttcggtat ggtcgcctac gcctccagct tcgatcaaac cggcccgatg
     3001 gcgcaaactg ccgaagactg cgcgattctg ttaaacgcga tggcaggttt cgaccccaaa
     3061 gactccacca gcctcgagcg cgaaaaagaa gactacaccc gcgatttgaa ccaaccgctc
     3121 aaaggtttga aaatcggcct gcccaaagaa tatttcggcg aaggcaacag cgccgatgtt
     3181 ctgacggcat tgcaaaacac cattgatttg ctgaaagccc aaggcgcgga attgattgaa
     3241 gtttccctgc cgcaaaccaa gctgtccatc cccgcctact acgtcctcgc ctccgcagaa
     3301 gccagcacca acctttcacg ttacgacggc gtacgttacg gacaccgtgc cgcccaattc
     3361 gccgatttgg aagaaatgta cggcaaaacc cgcgccgaag gtttcggcag cgaagtcaaa
     3421 cgccgcatca tgatcggcac ttatgtactg tcgcacggct actacgatgc ctactatctc
     3481 aaagcccaaa aactgcgccg cctcgttgcc gatgattttc agacggcatt tgcacggtgc
     3541 gacctcatcc tcgcgccgac cgcacccact gcagccccaa aaatcggagc ggatgcttcg
     3601 ccggttgaaa cctacttgag cgatatctac accatcgccg tcaacctcgc cggactgccc
     3661 gcattgaccc tgcccgcagg cttcagcggc ggcggactgc ccgtcggcgt tcagcttgtc
     3721 ggcaactact tcgccgaagc caaaatcctc ggtgcggcgc atcaaatcca actcaacagc
     3781 gattggcacg gcaaacgacc cgaatgaagc agaaccgcac ctttaccttc cccgattttc
     3841 gcaccgttta cagctatgcg cctttatatc ggctgcaaca tttaaaatac acattgcgaa
     3901 aatttttcgg aaaaaaagaa atttacgcct tcgagcagtt tgtcaacgcc tcccctatcc
     3961 gtcaggggct gttcctccac tgcccgcaaa atgcctatcc gctgctgcgc gaatttgttg
     4021 acaggcgttt taactgcaaa cgccgtttag atgcgatgac ggcagatttt ctcatggcgg
     4081 aaaaactgtt cggcacagac atcctgcacc aaatggaaga ctaccgcttc catttggtct
     4141 tggcgcacct ttcagacggc atcagcttgt ggctcaaccg caacgacaac tgcgtcgaag
     4201 aaggcgcgtg gtctttatct ttgcgcgacg aagcaggcaa ccggctgtat atggcgactt
     4261 tcgcctttgt cggcacacac ctgctgacag cctccgtaca agggcctgcg ggtgaagaag
     4321 ccaaagacac tgtccgccgc ataaccaaac aacttcacgg cttgcgtccc caacaactga
     4381 tggtaaccgc cctgcaatat ttcgccgccg tactcggctt ggacggcgca atgggcattg
     4441 cacaaaaaca tcaggtcaaa ctgcgctgga aacttaaaaa gcgtgtcaaa atgaattacg
     4501 acgcattctg gcaggaatac ggcgcaagtt tggaacggga cggctactgg catctccccc
     4561 aaacccccgc ccgcaaagac cttaccgaca tcgaaagcaa aaaacgctcg atgtaccgca
     4621 agcgttatga aatgctggac aacatggttg cagagatgaa ggacggtctg aaaacagaag
     4681 cacgcggcat ttcagacggc atccaaacgg aaaaaccgct ccgccggaca gcctgacgcg
     4741 aagactatcg aattgatatt ttagagaaag aagctcttat gacctgggaa accgtaatcg
     4801 gcttggaaat ccacgtccaa ttgaacacca aatccaaaat cttcagcggc gcatcgaccg
     4861 cattcggcgc agaacccaac gcgcacgccg gcgtagtgga atgtgctttg ccgggcgtac
     4921 tgccggtaat gaaccgagaa gtcgttgaaa aagccatcaa attaggcttg gctttggatg
     4981 cgaaaatcaa ccggaaaaac gtgttcgacc gtaaaaacta cttctatccc gacttaccaa
     5041 aaggctatca aatcagccag ttggacttac cgattgtcga acacggcaaa ttggaaatcg
     5101 tagtcggcga cgatgtgaaa accatcaacg taacccgcgc ccatatggaa gaagacgcgg
     5161 gcaagtccgt acatgaaggc ttgaacggcg cgaccggtat cgatttgaac cgcgccggca
     5221 cgcctttatt ggaagtcgta tccgaacccg aaatgcgctc cgccgccgaa gccgttgcct
     5281 acgccaaagc cttgcacagc ttggtaacct ggctgaacat ttgcgacggc aatatggcgg
     5341 aaggttcgtt ccgcgtcgat gccaacgtat ccgttcgccc gaaaggtcaa gcggaattcg
     5401 gcacgcgccg cgagattaaa aacctcaatt ccttccgttt cttggagcag gcgattaatt
     5461 acgaagcaga agcgcaaatc gagattttgg aagacggcgg caaagtacag caggcaacga
     5521 tgctgtttga tcccgaaaaa ggcgaaaccc gcgtaatgcg cctgaaagaa gacgcgcaag
     5581 actaccgcta cttccccgac cccgatttgc tgcccgtcat catttcagat gcccaaatgc
     5641 aaaaagccaa agcagaaatg cccgagctgc cgaaagaaat ggcagcgcgt ttcgtggcgg
     5701 actacggcgt gtccgaatac gacgcgcgcc tgctcaccgc aagccgcgca caggccgcct
     5761 attttgaaga agccgccaaa gagagcggac aaggcaagcc gactgccaac tggatgaacg
     5821 gcgaactcgc cgccgcactg aacaaagaag gcatggaact tgccgacagc ccgattaccg
     5881 ctccgcgcct cgccgcgctg gtaggcaaaa tcgccgacgg cacattaagc agcaaattag
     5941 cgaaaaaagc ctttgaagcc atgtgggcag aatccgaagc caccattgcc gaaatcattg
     6001 aaaaacacgg tttgcagcaa atgaccgata ccggcgcgat tgaagccatg gtggacgaag
     6061 tgctggcaaa caacgccaaa gccgtggaac agttcaaatc cggcaacgaa aaagccctga
     6121 atgcgattgt gggacaagtg atgaaggcca gcaaaggcaa agccaacccc gcgcaggttc
     6181 aagagctgat taaagccaaa cttgcctgac aagcaagatg ccgtctgaaa cccaaatccg
     6241 acgttcagac ggcattttca cagtctgacc acattaaaac agcataaaaa acaatattcc
     6301 atgaaccaca ccgttaccct gcccgaccaa accacctttg ccgccaacga cggcgaaacc
     6361 gttttggccg ctgccgcccg acaaaacctc aacctgcccc attcctgcaa aagcggtgtc
     6421 tgcggacaat gcaaagccga actggtcagc ggcgatattc aaatggacgg acactcggaa
     6481 caggctttat ccgaagcaga aaaagcgcaa ggcaagattt tgatgtgccg caccaccgcg
     6541 caaagcgata tcagcatcaa catccccggc tacaaagccg atgccctacc cgtccgcacc
     6601 ctgcccgcac gcatcgaaag tattattttc aaacacgatg tcgccctcct gaaacttgcc
     6661 ctgcccaaag ccccgccgtt tgccttctac gccgggcaat acattgattt actgctgccg
     6721 ggcaacgtca gccgcagcta ctccatcgcc aatccgcccg accaagaagg cattttggaa
     6781 ctacacatcc gcaggcgcaa aaacggtgtc tgctcggaaa tgattttcgg cagcgaaccc
     6841 aaagtcaaag aaaaaggcat cgtccgcgtt aaaggtccgc tcggttcgtt taccctgcag
     6901 gaagatagcg gcaaacccgt catcctgctg gcaaccggca caggctacgc ccccatccgc
     6961 agcatcctgc tcgaccttat ccgccaaaac agcagccgcg ccgtccattt ctactggggc
     7021 gcgcgtcatc aagatgattt gtatgccctc gaagaagcac aagggttggc atgccgtctg
     7081 aaaaacgcct gcttcacccc cgtattgtcc cgccccggag agggctggca gggaagaaaa
     7141 gggcacgtac aagacatcgc ggcacaagac caccccgacc tgtcggaata cgaagtattt
     7201 gcctgcggct ctccggccat gaccgaacaa gcaaaaaatc tgtttgtgca acagcataag
     7261 ctgccggaaa acttgttttt ctccgacgca ttcacgccgt ccgcatcata attccccggt
     7321 ataaaaaaga ttcaggcttt ccgttcggaa cacaaaaaac ttcccgtccg tattttcccc
     7381 ataaaaaatg ccgtctgaag cccgattccg gttttcagac ggcatatgtt ttttcctgtt
     7441 caaggcgaca gccgctcgcg tatccagcca ccatccagca aacggtattg gatgcggtcg
     7501 tgcagcctgc tcggcctgcc ctgccaaaac tcaatcaaat cgggaatcac aatatagccg
     7561 ccccaatgcg gcggacgcgg cacgtgcaaa ggatgtttga gtccgaccgc cgccgccttt
     7621 gccaccaata ccgccttgtt cggaatcacc tcgctctgcg cacttgccca cgcacccaaa
     7681 cggctctgat acgggcggct ctcaaaatat tcgtccgaca acttctccgc cagcctttca
     7741 acacgccctt ccacgcgcac ctgacgctcc agctccggcc aaaaaaacgt catcgccgca
     7801 aatggatgag catccagcga acgtccctta cggctgtgat aattcgtaaa gaaaacaaaa
     7861 ccttcagaat taacttcctt cagcagcacc atacggctgt tgggtctgcc gcgtccgtcg
     7921 accgccgcca cattaaccgc cgtcggctcg ttgacctgtg cgcgtaccgc ctcgtccaac
     7981 caccgctcga actgctcgat cggattgtcg gcgcaatcgc cttccgacaa ttcccgttta
     8041 ctgtaatctt cccgaatatt gtgcaaatcc atttaccgct cctcttgtca tttgaaagat
     8101 tctacccccg cacgcaaacc gatttcaacc gttgcacaaa ctttgcctcg cttctccaaa
     8161 cctcaggaca caacgatttc atccgcaaaa ccgccgcata aggtacaata tcgaaccgtc
     8221 cgaccgaggg cggcatttta tcaacccgtc ctgccgcaca cgccgcagaa gaaccgcctt
     8281 atcaggcgag ttaggaaaaa tgatgtccaa acagcccacc agcaaacgcc aatggcgcga
     8341 cggcgtagcc ccgtctgcca agaaaaccgc caaacctttc aaaagcaaag cccgtcccaa
     8401 agacgaaacg gacaaaaccg catcccaacc ttacggacaa aaagcttcag acggcatcaa
     8461 acctcaaaac ctccccaaac agcgcgccgc caaagccaaa aaactcgtcg tccgcaatcc
     8521 caaccaaaaa attatggaac acgcgcgcga tttaaaagaa cgccgcagcg acctatcgcg
     8581 catggaaccc gaacgcctgc aaaaagtgct tgccgcgtcc ggcgtcggct cgcgccgcga
     8641 aatggaagaa tggatcaaca acggctgggt aacggtcaac ggcaaaaccg cgcaactggg
     8701 cgacaaagtc acccccgacg accacgttac cgtcaaaggc agcatcatca aactcaaatg
     8761 ggccgaccgc ctgccgcgca tcatcctata ttacaaacaa gaaggcgaaa tcgtttcccg
     8821 cgacgacccg caaggccgcg tcagcatatt cgaccgcctg ccgcaggccg ccagcagccg
     8881 ctgggtcgcc atcggacgct tggacatcaa caccagcgga cttctgattc tcaccacctc
     8941 cggcgaactc gtccaacgtt tcgcccaccc cagcttcgaa gtcgaacgcg aatacgccgt
     9001 gcgcgtactg ggcgggctga ccggcgaaca aatgcgcgtc ctcaccgaag aaggcgtgat
     9061 gctcgaagac ggcttggcaa aagtcgaacg catccgcgaa caaggcggcg aaggcgcgaa
     9121 caaatggtac aacgtcgtga ttaaagaagg ccgcaaccgc gaagtgcgcc gcatttttga
     9181 aagccaagga ctcaccgtca gccgcctcgt gcgcgtcggc ttcggcccca tcggactgcc
     9241 caaccgcctc aaacgcggac agttctacga actcaacccc gccgaagtcg ccaacatcct
     9301 caaatgggcg gaaatgctgc tgccgggcga acgccgccgc aaaaaagcct aaacccgcca
     9361 aaacacaaaa atgccgtctg aaacatctac tgtttcagac ggcattttat tcgggcgttt
     9421 tcaggagaaa aggtcgagtg ctttgacaaa gaccatcacc acgccgtagg cgagcggtat
     9481 gacggccaat gcccaacgcc accagaccga tatgccgccg ccggaaactt tttcgcccac
     9541 aaggtaagcg tcggatatgg cggtttcgtc atcggggttg ccgctgtgtg cggcggtttt
     9601 gatgtctttt tcgtggtgtt tttcgtgtac ggatttgacg gcgaggttgc acaacaaacc
     9661 gataatcagc aggcacgcca tgatgtacat ggttacgctg tatgcctgtg ccgccggtat
     9721 gccgctgtcg atttggcttt ggcgtatgta attgaccagt accgggccga tgacggcggc
     9781 ggttgaccag gccagcagga tgcgcccgtg aatcgcgccg acctgatagg tgccgaacag
     9841 gtctttcagg taggcgggaa tggcggcaaa tccgccgccg tacatggaaa taatcacgca
     9901 aaagccgatg atgaacaggg ctttgctgcc gccctcgccg atggagggaa cggcgaaata
     9961 cagcagcgaa ccgagtacga agaaaatggt gtaggtgttt ttgcgtccga ttttgtcgga
    10021 aacgctcgac cataaaaagc gtccgcccat gttaaacagg ctcaggaggc tgacgaagcc
    10081 tgccgccgca cctgcgccga ctgacgcctg cctgcctacg gaggtttcgg aaaagagttc
    10141 ctgaatcatc acggatgcct gacccaatac gccaatgccg gcggttacgt tcaggcacaa
    10201 tacccagaac aacagccaaa attgcggcgt tttcatggct tgtgacacgt tgacatgatt
    10261 gctgctgacc agcttgtttt gcgttttcgg cgcggtatag ccttcaggtt tccagccgtc
    10321 ggcaggtacg cggatggtaa acgcgccgaa catcatcagt gcgaggtaaa gcaggcccaa
    10381 tacggcgaag gtttcaacaa ccccgactga agcggcgttt gaaaaggcgt tcatcagtga
    10441 tacggaaagc ggagaggcca gcattgcgcc gccgccgaaa cccataatcg ccaaaccggt
    10501 cgccataccc ggcttgtcgg gaaaccattt catcagtgtg gaaaccggcc cgatgtagcc
    10561 taagcctaag cctacgccac cgatgacgcc gttgcccaaa taaagcagga agaggttgtg
    10621 cgtactcacg ccgaatgcgg atacgaagaa gcccaggctg aaacagcagg cggcggcaaa
    10681 tatggctttg cgcggcccta cccgttccat ccatgtgccg aacagggcgg ccgacgcgcc
    10741 cagcatcgcg agtgcgatac tgaaaatcca acctacggtc gtcagcttcc aatctccggc
    10801 cgccgattcg gttatgccga taagtttggt cagcggcgcg ttgaatacgg aataggcgta
    10861 aatctgcccg atggcaaggt gtaccgccaa tgctgcgggc ggtacgagcc aacggttgaa
    10921 acccggcttg gcaatgcttg cctcacggtc taaaaacttc ataacatcct ctttctgtca
    10981 gttgaaaaat aaaatttcat ttgctcaatg gaaacttatt gaaaactata aaaaaatatc
    11041 ggatcggttt tttatccgcc ccaagatgcc ccgtctgaaa catttcgggt gtacggaaag
    11101 gtttctgttt tttccgacaa attcctgcgg cttttcgctt ccggattccc gcttttgcgg
    11161 gaatgacgaa ttaaagatta tcttaaggtc aagggactgg attcccgctt ttgcgggaat
    11221 gacggcggcg ggttgctgtt ttttatttat aaatttctgt aactttggat ttcagccatc
    11281 ttcaataaat tatcgaaacg tatcaatcgt cattcccgcg caggcgggaa tccatccagt
    11341 tcgttcgatt tcggtttttt aagtttcgag taacttctga ctcgtcattc ccgcgtaggc
    11401 gggaatccgg ttttttgagt ttcagtcatt tctaatacat tcccaccact tttcgcttcc
    11461 ggattcccgc tttttcagga atgacgaatt aaagattatc ttaaggtcaa gggactggac
    11521 tcccgctttt gcgggaatga cggcggaggg ggagcggttt ttccgattgg gtttaaatgc
    11581 aatcgaacaa atcctgctgc ccttgttctt tgcttacgcg cacgtcggtt tcgccgtcgg
    11641 cgaaggtaat gtgcagcttc tgcccctgct tcaaaacatc ggcgttgcgg atgacttgtc
    11701 cgcgtgtgtt tttgacgacg gaaaagccgc gctccagaat gtgctgcggc gaaacggctt
    11761 cgagcaatgc ggcttgggcg gtcaggcttt ggcggcggtg ggtaagcagt tggctgaagg
    11821 cggcgggcaa tgccgtctga aggcggacga tgttgttttt gcaaacggaa acatcaggac
    11881 ggtaatgttg cagggcttgg gtttggcgtt caaaacgggc ggtgtgggca cggaggtttt
    11941 gcttcatcga gtaagacagc gtttgcgcca gcttgccgat tgaagcgcgc tgctcatcaa
    12001 gtttttggcg cggatgacgg atttgccgcg caagccagtc gagtttttgg ctggcatcga
    12061 aatagcgttg ttccaaaacg gttttcagac ggccttgcgc ctgagcgaga cgatgtagcg
    12121 attcttggcg gttggggctg accagctccg ccgcaccggt cggcgtgggc gcgcgcacgt
    12181 cggcgacaaa atcggcaagc gtaaaatcgg tttcgtgtcc cacgccactg acgacgggaa
    12241 ccgtgcaggc ttcgattgcg cgcacgaccg gttcttcgtt aaacgcccac aagtcttcaa
    12301 tgctgccgcc gccgcgacag acaatcaaca cgtcgcattc ggcgcgttgc gaggcggttt
    12361 taatcgcttg ggcaatttgt aactcgctgc ctgcgccttg aacaggtgtc ggataaacga
    12421 taacgggaat ttcgggcgcg cggcgtttca aggtggtaac gacatcgcgc aatgccgctg
    12481 ctgccaggct ggtgacgatg ccgatacatt gcggacgggt aggcaacggc tttttgcgtt
    12541 ccgccgcaaa cgcgccttcc gcctgcaact gtgccttcaa ccgctcgtag gcttcgtaaa
    12601 gctgccccaa acctttgagc cgcacctcat tcacggtaat ttgaaattcg ccccgcgcct
    12661 cgtaaatact gatttttcct gatacttcga tatggtcgcc ttctttcaaa ggcttcgcca
    12721 aacgcgccgc cgcacctttg aacatcgcgc aacgcacctg cgcgcggctg tctttgagcg
    12781 agaaataata atgtccgctg gcggcacggg tcaggttgga cacttcgccc gcaatccaca
    12841 ggccggcaag gtggttttcc aaaagacttt tggcaaatgc gttcaactcg gaaacggaca
    12901 acacgtcaga atgaaaaaaa tcagacatag aatcaatcaa ataataaaaa atatgaatat
    12961 gttttgaagc ctaaggcggt attagtccgc ctaaattgtc aacaatatta taacacgcgc
    13021 catcttgccg cccgcctttt cccgtatgac ttttttaagc ggggaatggg aaaaatattc
    13081 atcaacccgc cctcaatcta ttcaaattac accgccgaca agctatgatg cggatatttt
    13141 cgacaggagg aaaaatggat acgcaggcag ttatcacaca tattgtccga tggttggacg
    13201 aatacgccgc ccgggcaaat gcaaaagggt ttgtcgtggg cgtttccggc ggcatcgatt
    13261 ccgccgtcgt ctccgcactc gccgcccgca ccggccgcac cacgctgctt ctggatatgc
    13321 cgatacgcca acaccccgac cagcttgagc gggcaaggct gcacatccgc aatctgcaac
    13381 ggcaatatgc caatgtaagc gcacaaacgg tcgatctgac cgacaccttc cagacctttg
    13441 aacaaaccgt cggcgttcat cagacggcat ttgacaatca gccgctttcc ctcgccaacg
    13501 ccagaagccg cctgcgtatg ctgaccctgt actactacgg gcagatacac ggactactgg
    13561 ttacggggac aggtaacaaa attgaagatt tcggtgtagg attttttacc aaatacggcg
    13621 acggcggcgt ggacatcagc ccgattgccg acctgaccaa aacccaggtt taccggcttg
    13681 ccgaagcatt gggcgtggac gaggcgattc aaaaagcccc gccgaccgac ggcctgtggg
    13741 atacggaacg caccgacgaa gaacagatgg gcgcaagcta tcccgaactg gagtgggcaa
    13801 tgggcgtgta cggcacgcgc aaacccgaag attttgaagg gcggcagcgc gaagttctgg
    13861 aaatctatac gcggctgcac cgcgcgatgc agcacaaaat caacccgatt cccgtgtgcc
    13921 gcattccgcc cgaattgttg ggctgaaacg tggaaatgcc gtctgaagcg gaaaaccgtg
    13981 tttcagacgg cattgacata tccggctcct atcccttaag aatcgagtac gcgggcaaac
    14041 aaaatatcgt tttccaaatg aatgtggtcg ttcaaatcct ccaccatttc tttggccaaa
    14101 gcgtaaagcc gcgtccagct tccgcaggct ccttcgggcg cttggaaatt atcggtcagc
    14161 tctttgagcc ttgcgatggc gcggtcgtgt tcttcatgtt cgtgcatcat cacgctgatg
    14221 ggcatcgccg caccccgacc gacaccctga ttaatcatcg gaaacagcat cctttcctct
    14281 ttcatcatat gcatcagcag ttcgttctgc atataggcaa gcagctcggc aatttccgcc
    14341 ggaaaggtat cggcatgaac ttgggccact ttttgcgcca gcggcaccaa ttcttcaaat
    14401 tgtgcacggt gtacattgtg gtagcgttgc aggatatgat cgacggttgc accaaaggga
    14461 gcagtttccc aaacggaaaa atcagtcatg gcagggttcc ttttatttat agggtttcgg
    14521 gtttggtttt gaacattcat actttaagaa tctatttaaa cggagcatac accgcccgcg
    14581 cgcttctgta cagcctcaaa cgtattcctt acattttgat aataaaagta attttcagaa
    14641 ataaaatact gtccgaaccg ttttttagaa tttgcaaagg cgattggggc ggtacagaaa
    14701 aactattatc ccgcccgccc acttgaaatt tttatgccca agccctatcc tgcacgctat
    14761 cgtgccaatc ccaaccgaaa aggaaaaata atgagcagcg aattgattgt acacaccagc
    14821 gatgccgctt ttgaaaaaga cgttttaaat gcagatatcc ccgtcctgct ggacttttgg
    14881 gctccgtggt gcggcccctg caaaatgatt gccccgattt tggacgacat tgccgccgaa
    14941 tttgaaggcc gtctgaaagt ggtcaaaatc aacatcgacg acaacgaagc caccccgtcc
    15001 cgtttcggcg tgcgcggcat tccgaccctg atggtgttca aaaacggcga agtcgtcgcc
    15061 accaaagtcg gcgcattggc aaaaggtcag ctgaccgcct ttgtcgaagc ctctatcgcc
    15121 tgataaagcg caatcgaaaa agccgccgga agattccggc ggctttttcg cacccttaag
    15181 atttgtggcg gatttcccag cacctatgga tttttttgtt gcggaaatct tcgggaacgg
    15241 attgtttgga aatgtctttg acggcgtatt gttccgatac caagtcgtct aagacgaagc
    15301 tgcgcaggtt gttggaaaag tacaaaatgc cgtctgaagc gagcagcttc accgcgccgt
    15361 caatcagctt tttgtggtcg cgctggatgt cgaggatgtc ggacattttc ttgctgttgg
    15421 aaaaactggg cgggtccatc acaatgaggt cgaaccgcct gccttcccca tatgccgtct
    15481 gaagatattg gaacacgtcg gcgcggacga ttttatgccg ttccgtatcg atgccgttca
    15541 attcaaaatt gcgtctcgcc caatcgagat aagtgttaga caaatcgaca gtttcgctgg
    15601 atgccgcgcc gccggtggcg gcatagacag tgaagctgcc ggtgtaggaa aacaggttta
    15661 aaaaacgttt gcccgccgcc gtttcgccga cttttttgcg cgtgtttcga tgatccaaaa
    15721 aaagccccgt atccaaatac ttatcaaggt tgacccaaaa cttgcggccg ttttcggtga
    15781 tgacgaaatc gtcgcccgcc ttgccggttt tttcgtattg ctgcaaacct ttttggcgtt
    15841 cgcggcgttt gaggcggatt tgttcgggcg caaaaccggt aacgaaggcg acggcttcca
    15901 agacttcggc aagccacgct tcgtattctt cgggccgcat cagccagccg gtatcgtatt
    15961 cctgaaggtg gattcgatcg ccgtaaacat cggcggcaaa ggggaattgg gggatgtcgc
    16021 ggtcgtaaat gcgccaggct tcaatgccgt tgcgtttcgc ccatttcata aggtgtttga
    16081 tgtttttgcc caagcggttg gcaaacggtg tgatgtcggt cattggtttc aggcggaata
    16141 aagtggaaaa cggcaatttt actgtaatta acgcccgatt gcttgaccgt ttcgggcaaa
    16201 ccctatacca tccgccgctt atcttgtcat acgaagccat cgccttccaa cctaaaccgc
    16261 ccttacgggc gcgtttcttt tgttgcttgc atatttgcca agcctttctg tgcaggttgt
    16321 cgtcgatgta aaccacaagc aagccgcttg cgacaaccct gtaacttcac attccccgta
    16381 tcgttaccct tccctgcttc aggccgtctg aacctttcgg acgcgggcgt tgttgtcttc
    16441 caaggatagc catgtctatt aaatttgccg atttgaacct cgataaaaac atcttgtccg
    16501 ccgtcagcag cgagggttac gaaagcccga cgccgattca ggcgcaggcg attccgtttg
    16561 ctttggaagg ccgcgacatc atggcttcgg cgcaaaccgg ctccggcaaa accgccgcct
    16621 ttctgttacc gactttgcaa aaactgacca aacgcagcga aaaaccgggc aaaggcccgc
    16681 gtgctttggt gttgaccccg acccgcgaat tggcggctca agtcgagaaa aacgcgctgg
    16741 cgtatgccaa aaatatgcgt tggttccgta ccgtcagcat cgtcggcggc gcatcgttcg
    16801 gctaccaaac ccgcgccctg agcaaaccgg tcgatctgat tgtcgccacg ccgggccgtc
    16861 tgatggacct gatgcaaagc ggcaaagttg attttgaacg tttggaagtg ctgattttgg
    16921 acgaagccga ccgcatgtta gacatgggct ttatcgacga catcgaaacc atcgtggaag
    16981 caacgccgag cgaccgtcag actttgttgt tctccgccac ttgggacggc gcggtcggca
    17041 aactggcgcg caaactgacc aaagaccctg aaatcatcga agtcgaacgc gtggacgacc
    17101 aaggcaaaat cgaagaacaa ctgctgtact gcgacgatat gcgtcacaaa aaccgcctgc
    17161 tcgaccacat cctgcgtgat gccaacatcg atcaatgcgt gattttcacg tccaccaaag
    17221 cgatgaccga agtcatcgcg gatgaattgt acgaaaaagg tttcgccgcc aactgcctgc
    17281 acggcgacat gccgcagggc tggcgcaacc gcacgctgat ggatttacgc aaaggccgct
    17341 gcaaaatttt ggttgccacc gacgttgccg cacgcggtat cgacgtaccg accattaccc
    17401 acgtcatcaa ctacgacctg ccgaaacagg cggaagacta cgtccaccgc atcgggcgca
    17461 ccggccgcgc aggccgcacg ggtattgcga ttacgtttgc cgaagtgaac gaatacgtca
    17521 aagtccacaa aatcgaaaaa tacattaacc gcaaactgcc cgaactgacc atcgaaggca
    17581 tggaaccgac ccgcaaacgc aaatccgcag gcggtaagcc aaaaggcaaa ggcggctggg
    17641 gcgataggaa atccggcggc cggcgcggcg atcataaacc gggcaaagaa ggcttcggcg
    17701 gcaaaacgcg cggcgaaggt ttcaagaaag aaggctttaa gaaagacggt ttcaaaaaaa
    17761 ccggcgaagg cttcaaaggc aaacgtaaag ccggcgattc ttttgcaggc agaggcgaac
    17821 gccgttacaa agaccgctaa gccccaacct gccgcataaa ccaatgccgt ctgaaaccga
    17881 tttcgggttt cagacggcat ttttgcaatg tttcaacacc gcccggcttt gatacccaaa
    17941 ggattaggct gtaataaaaa cccttttccg ctttggcaac gattgaaaat ttacgtaaat
    18001 tcaaatatct agattccttc ctgcacggga atgacacgga agggtttcag atgcagggtg
    18061 ggcattcctg cccacccaat cccgcccttg caacggtggg caagaatgct cgccctacgg
    18121 cttgactgtt cgatatgatg ccgtctgaaa acccaacggc ggcatgacaa tgccaccctg
    18181 ccaacgcacg taaatcagaa ttgccatccc gacatcaaac gcttggaaac aaaatgccgt
    18241 ctgaaaatca aacggcaaca taacaatgtc cctaacaaat gcaaaaatgc cgtctgaaag
    18301 cccttcagac ggcattggca cgccgggttt accgcctcct gccgaaaccg cgcatagcgg
    18361 ggcggcggta attggcgggc gggcgcgttg tcgggcggta acgctgcgcc tgcgccgcct
    18421 gttgttttgc acggaggctg cgcgtgttca aatccctgct ggtgcgcgca ttgggatgtg
    18481 cggactgatg gtaggctgca cgcgcgcgtc gggcgacggg actgtcttgg ttgcctgccc
    18541 gtgtgaattt gtttgccagc gcgttgccga taaacgcgcc tgccgccgcg ccgaccaggc
    18601 tttgcagcag ccagcttcct gtcgattggt cgtaaatata ctgctgcccg tctttaccgg
    18661 taacgggttg cccgttgttg ccgtttgcct gtgcttcggc aggaatggtg tctttgactg
    18721 cttcgggagt cagttggtaa accgtatcgt ctgcctgctg tgcgagctgc tgttgcaggg
    18781 cttcaatctg tttctgctgc tgttcgagcc gcgcctgcgt gtcgtcttgg caggcggcga
    18841 gtgcgaatgt tgcgataagc gcggaggcga tgattttttt catgtgtgtc ctgtttgggt
    18901 ggaaaatcgg ttttattgta tcgccgtcgg gaattttggc aagcattctg ccggcaaatc
    18961 gtgatgttta caggggcagg gtgtgcaatt tgcggacaaa tgcgaggctg ttggcgactg
    19021 ggttgccttt gttttcgact tcgtgttcgg tttctacggt cagcaggcgg cggtttttgt
    19081 gtttgttcag gctcaattcg gcttgtgcgg gtgtgaaaaa caggcggtgt ttttcggcaa
    19141 agcggcgggc gcggctgttg gcggttttca aaatctgaag cagcgatacg tccagatgga
    19201 agcgtcgcac gcccaatacg agaatccgtg cggcaaaaaa atcggcggca tcggtaaact
    19261 cggcggggct gctgcggctg aagtcgtgcc gttcggcggc tatcagggcg gcaacagtgc
    19321 ggatttgcgg aatcatcgat tcgctgatga gtgtgtcgtc ccgccctgca tcgagaagca
    19381 tgggggaaaa atcccgtgca tcatcgacaa taatgctgca aatgtgcagg gtttcgtttt
    19441 gtgcggcggt ttggggcatt gcattcatgg tcattttcct gattctgtcg tgtgttgccg
    19501 aatcgggcga cctgtgtgaa ggtaacaaaa aagccgcccc attttcgagc ggcctgtttt
    19561 gcgtatggga tggatttcaa gcaagcgcaa aaaagtaccg cacgtctgtg tggtaccaat
    19621 agcaataagc ggttgtaaat tttttgcctt gcatgatgaa atgccgtctg aagataaaaa
    19681 tattggggag attctaaatc aaaacgctgc cgcgcctcaa gcattttatc gaaatttttt
    19741 tgatttttca tctatccgat tgaaaatatt tcggtttatt tttaccgctg cccgatattg
    19801 tcggcaattt ccctttatct gctttgaaaa acggtgcata atcccgagca aaaccgcaat
    19861 caggagcaat tatgcaaaac tatctgaccc ccaatttcgc ctttgcaccg atgattcccg
    19921 aacgcgcttc aggcagccgc gtttgggata cggaagggcg tgaatatatt gacttttcag
    19981 gcggcatcgc cgtcaatgcg ctgggacact gccaccctgc ccttgccgat gctttaaaca
    20041 cgcagatgca caagctgtgg cacatttcca atatctatac gacgcgtccg gcgcaggaat
    20101 tggcgcaaaa attggtgaag aacagttttg ccgacaaggt ttttttctgc aactcgggcg
    20161 cggaagcgaa tgaggcggcg ttgaagctgg caaggaaata tgcgcgcgac cgtttcggcg
    20221 gaggaaaaag cgaaatcgtc gcctgtatca acagtttcca cggacgcacg ctgtttaccg
    20281 tgtccgtcgg cggtcagccg aaatacagca aggattatgc acccctgccg caaggcatta
    20341 cgcacgttcc gttcaacgat attgccgcgc tggaagctgc cgtcggcgaa cagacctgcg
    20401 cggtcatcat cgagccgata cagggcgaaa gcggcatcct gcccgccact gcggaatatt
    20461 tgcaaaccgc gcgccgtctg tgcgaccggc acaatgcgtt gttgattttg gacgaagttc
    20521 aaaccgggat ggggcatacg ggcaggctgt ttgcctatga acattacggc gttgttcccg
    20581 atattttgag ttcggcaaaa gccttgggct gcggctttcc gatcggcgcg atgctggcga
    20641 cagaaacgat tgccgccgcc ttccaaccgg gcacgcatgg ctcgactttc ggcggcaacc
    20701 cgatggcgtg tgcggtcggc agccgcgcct tcgacatcat caacgcgccg gaaaccttgc
    20761 acaacgtctg cagtcagggg cagaaacttc agacggcatt gcggtctttg ggagaacaaa
    20821 cgggcgtgtt taagcaagtt cgcggcatgg ggctgctgct cggctgcgtg ttggacgcgc
    20881 cttatcgcgg acgcgcatcc gaaataaccg ccgccgcctt gaaacacggc gtgatgattt
    20941 tggttgcggg tgcggacgta ttgcgtttcg cgccttcgct gctgttggac gatgaggata
    21001 cggcggaagg tttgcggcgt ttggaacacg tgctgacgga atttgccgcc gcaaaccgcc
    21061 cctaggcatc aaaaacaaaa aaccgcttcg gaaacgtggt tcaacgttcc gaagcggttt
    21121 tgtttgccat caggactcga acaccaattc cggttccttg ccctcttcga tgactgcctt
    21181 accgaccacc acttttttca agccttgcaa atcaggcagg cggtacatcg tatcgagcag
    21241 gcagcgttcg acgatggaac gcaggccgcg cgcgccggtt ttgcgctcca ttgcctgcca
    21301 cgcaatggaa cgcaatgcgc cttcttcaaa ttccaactcg acattttcca taccgaacaa
    21361 ggcttgatac tgcttgacca aagcgttttt cggctcggtc aaaatattaa tcagcgcgtc
    21421 ctcatccagt tcttctaacg ttgcaatcac aggcaaacgt ccgattaatt ccggaatcag
    21481 accgaatttg attaaatctt ccggttcgac gatgccgaac agcttggtaa tgtcggcatt
    21541 ttcgtccttg ctgtgaacgg acgcaccgaa accgataccg cctttttcag tacgctggcg
    21601 gatgactttt tccaagcctg caaacgcgcc gccgcagata aacaggatgt tggtggtatc
    21661 gacgttgata aattcctgat tcggatgctt gcggccgcct tggggcggaa cgctggccac
    21721 cgtaccttca atcagtttca gcaaggcttg ttgcacgcct tcgccggaca cgtcacgcgt
    21781 gatggacgga ttgtcgcttt tgcgtgaaat cttatcgatt tcgtcgatat agacgatgcc
    21841 gcgttgggct ttttcgacat cgaaatcaca tttgcccaag agtttggtga tgatttgctc
    21901 gacatcttcg ccgacataac ctgcttcggt cagcgtggtt gcatctgcca tcacgaacgg
    21961 cacatccagt ttgcgcgcca aagattgcgc cagcagggtt ttacccgatc cggtcgggcc
    22021 gataagcagg atgttggatt tcgacaattc gacattagct ccggctttcg ggtggcgcag
    22081 gcgtttgtaa tggttgtaca ccgacaccgc caaggctttc ttggcttgtt cctgaccgat
    22141 aacgtggtcg ttgaggttgg cgacgatttc ggcgggcgtg gggagcttgc cggattcttc
    22201 cggctcccct ccggcacttt ccgaaggcgt gccgtcattt ccgtcttcat gcaatatttc
    22261 aatacagttt gagacgcatt cgtcacagat aaaggcgttt tcgccctcaa ttaaatgttt
    22321 gacgtgtgat ttggattttc cgcaaaagga acaggtacgg ttttcgttgg acatggcttt
    22381 ctttacaatg tatgcgttac agaaacggca cgcgccgttc gggttgccaa gtataataac
    22441 tatatccgtt cttatcaatg tattacctta aaatcccgcc gattcggcta taatacgccc
    22501 tttcgcaacc gccccggcgg caaaaatgcc gtctgaaacc aaatctgaaa tctgaggata
    22561 ttcatgagaa aaccccaacg cggctatgcc cgccaagacc gtgtcaaaga acaaattatg
    22621 cgcgagcttg ccgaactcgt ccgtaccgga ctgaaagacc cgcgcgccgg cttcattacc
    22681 gtcaacgaag tcgaagttac ccgcgattac agccacgcca ccgtgttcta caccatttta
    22741 aaccaagacg cgcgcgaaat tacggaagaa gtgctggaac acgcgcgcgg acacctccgc
    22801 agcgaattgg ccaaacgcat caagctgttc aaaatccccg agctgcattt caaatacgac
    22861 gaatccttgg aacgcggtat gaacctgtcc gcccttatcg accaagtagc ggcggaaaaa
    22921 ccggttgaag actgacggat atgcccatgc cgtccgaaca tcgaaccatg aatacaggca
    22981 aaccccaaaa acgtgccgtc aacggtgttt tgctcttgga caaacccgaa ggcctttcca
    23041 gcaacaccgc gctgcaaaaa gcgcggcgtt tgttccgtgc cgaaaaagcc ggacataccg
    23101 gcgtgctcga tcctttggca accggacttt tgcccgtctg cttcggcgaa gcgaccaagt
    23161 tcgcccaata cctgctggat gccgacaaag cctacaccgc cacgctgaaa ctcggcgaag
    23221 ccagcagcac gggtgatgcc gaaggcgaaa tcgttgccac cgcccgtgcc gatatttcct
    23281 tagccgaatt tcagacggcc tgcaaagcat taacgggcga catccgccaa gtgccgccaa
    23341 tgttttccgc gctcaagcac gaaggcaaac cgctgtacga atacgcccgc aaaggcatcg
    23401 tcatcgaacg caaagcgcgc tacattaccg tttacgccat cgatattgcc gaatttgacg
    23461 cgcccaaagc cgtcatcgac gtacgttgca gcaaaggcac ctacatccgc accctcagcg
    23521 aagacatcgc caaacacatc ggcacgttcg cccacctgac cgccttgcgc cgcaccgaaa
    23581 ccgccggctt taccatcgcc caaagccaca cgcttgaggc cttggcaaat ttgaacgaaa
    23641 cagaacgcga cagcttgctg ctatcctgcg acgtattggt ttcacacttt ccccaaaccg
    23701 ttttaaacga ttatgccgtc catatgctcc gctgcggaca acgtccgcgt ttcgaggaag
    23761 acctaccttc cggcacgccg gtacgcgttt acactgaaat tggagaattt gtcggtttgg
    23821 cagaatatca aaaggaaata tgccgtctga aagccttgcg cctgatgaac acggcggcat
    23881 ccgccgcctg aacgacggtt aaaaatacgg gctgtgtttg aataatgtgt tgatatttcc
    23941 gcaaaatccc gacacactcg gacaccctcc ccgcttatcg caactttgcg aacgcccccc
    24001 gaaacagaaa agacatcaaa ggattgattt tattagaatt tatttgcaaa gccatttgcc
    24061 gttacacaag aatggcacat taaaatgact gatgaggatt tataacgatg aagacagtca
    24121 ttcaaaccga attaacccaa gccctgctat cacacgaaaa agtatgggcg aacgaagaaa
    24181 aaaccatttt agccaaaaac attctgttgg atttggtgga aaaaaccgac ccgaccatta
    24241 tcggtttgtt attgaataat gatgagttaa aacgccattt ctttgtggaa gtgaatggtg
    24301 ttttggtgtt taaattgcag gatttacgtt ttttcttgga caaacacagc gtcaataatt
    24361 cctacacaaa atacgccaac cgcattggtt tgacggacgg caaccgcttt ttgaaagaca
    24421 attcggatat tgtgttggat tttccgttta aagattgcgt attgaatggc ggacaaagca
    24481 ccgaagaagg cgaagagatt tattttaaac gcagtaatag ccagccagcc agccagccag
    24541 ccagccagcc agccagccag ccagccagcc agccagccag ccagccagcc agccagccaa
    24601 ttatacacta aattaacccg aaaaagacaa gaaatctttt ttaatcaaac gcttgctttt
    24661 gatgaaatcg atcggctttt tgacgcaaaa gcattctcaa aattctctcg ctataccgca
    24721 gacggcaaac aagcggttgg cgaaatcaaa cgtcattcag acggcacacc cgccgaaaat
    24781 ctcattatca aaggcaataa tctgatagcc ctacattcgc ttgccaaaca gtttaaaggc
    24841 aaagtgaagt tgatttatat tgatccgcct tattattttg ttaaaaagaa acaacaagat
    24901 agttttggtt ataacactaa ctttaaatta tctacttggc ttacatttat gaaaaatcgt
    24961 ttatcaattg ccaaagaatt attaactgat gatgggatta ttgttatttc cattgatgat
    25021 gacggaaatg cttatttaaa gattttgtta gatgaaattt ttggatttga aaattttatc
    25081 ggaaatttac ccactattat gaatttaaaa ggtaataatg atgaatatgc ttttgcaggc
    25141 actcacgaat acacactagt ctttgctaaa aataaagata aatctacttt ttatgaattt
    25201 ccaatagatg aagataattt tttagagaaa tgggaagaag atgaaattgg gttttataaa
    25261 aaaggagctc caatgcgagc aacaggaacc gaagataaaa gagaagatag acctgaaatg
    25321 ttctatcctt ttttggtaaa aaataacaca gttagtacaa ttacagatga agaattttct
    25381 caaatctata ataaagattt agaagtattc aatgatgatt ttattcaaaa actaaaagag
    25441 aaatacgaaa atcttggata caattttatt ttacctattg ctgataaaca atgggggcgt
    25501 tggcgttggg ggtattcaat aaagaataag gcaaggctgc agacggatat tattgttagc
    25561 caatctaaaa atggaatttc cttgtataaa aaacaaagac ctgaattaga tgatttacct
    25621 acaaaaaaac ctaaaactat tttttataaa cctgaataca gtagtggtaa tggaactgaa
    25681 cagatgaaaa atctttttgg tgaaaaggca tttaaaaatc ctaaaccaga agaacttatc
    25741 caagatttta ttaccatcac aaccaacgaa tccgacatcg tcttagacta ccatcttggt
    25801 agtggcacaa ccgccgccgt tgcccacaaa atgaaccgac aatatatcgg tattgaacaa
    25861 atggattata ttgaaacgct tgccgttgaa cgcttgaaaa aagtgattga tggcgagcaa
    25921 ggcggtattt ccaaagccgt gaattggcaa ggtggcggcg agtttgtcta tgccgaactt
    25981 gctccattta acgaaaccgc aaaacaacaa attttggctt gcgaagattc agacggcatc
    26041 aaaacgctgt ttgaaggttt atgcgaacgc tatttcttga aatacaacgt cagcgtaaat
    26101 gaatttagtc aaatcattca agagcctgaa tttcaatcct tggcattaga cgaacaaaaa
    26161 caaatggtgc ttgaaatgtt ggatttaaat caaatgtatg tttcattatc cgaaatggat
    26221 gatgagcaat ttgcaggttg cttaaatgat gacgataaag cgttaagccg tgaattctat
    26281 caatcagcaa aaaatcaagc ggagaaaaaa gatggcgaat aataaaacgt tatttgattg
    26341 ggtggaagac cgcaaatcaa cgctggaaga aatagaacag acagattttt tcgcgctgcc
    26401 tgaatttgta gaacgcaatt taaaatatcc gttttttgaa tggcaaaaat cggctttaga
    26461 aaactttgtg atttttgacc gcgcttcaaa attaaaggat ttccctgaca tcaaaaaccg
    26521 ccctacccat ttgctgttca atatggcaac aggtgctggc aaaacgatga tgatggcggc
    26581 gttgattttg tattattttg aaaaaggtta tcggcatttt ttgtttttcg tcaatcaaaa
    26641 taatatcgtg gataaaacgg aaaataattt tattgacccg gcgcactcaa aatttttatt
    26701 taccgagaag attttgcaag gcgaccaagt tattcccatt cacaaagtag aaacgtttag
    26761 cccac
//
LOCUS       DAWKOX010000007        25808 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.007, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000007 DAWKOX010000000
VERSION     DAWKOX010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25808)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25808)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25808
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.007"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(220..2193)
                     /locus_tag="WJK78_000204"
     CDS             complement(220..2193)
                     /locus_tag="WJK78_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEZ7597185.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGADADNAHIVFGDDTLRLHGANNRISYNNHDIFHKANKPRFAEDIEGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAGGSSNLPVENTACHIQVIAGTKHGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPVGAIVSFPKAVRNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAANGLAVGTKQEDEIKRHVHKVFSHWVNHPHAA
                     ALGYEDHNERQRSALVSTWTDENLNDNGFLTPRPDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETVNAGALDAGTLAQNLQDKADRAHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRHRDSLLEALQD"
     gene            complement(2204..2764)
                     /locus_tag="WJK78_000205"
     CDS             complement(2204..2764)
                     /locus_tag="WJK78_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HEZ7597186.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPRSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            complement(2761..3372)
                     /locus_tag="WJK78_000206"
     CDS             complement(2761..3372)
                     /locus_tag="WJK78_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ7597187.1"
                     /translation="MAAPAGVATECRLTVQGGTDRESDASLLARLLEIIRRPPAGGNR
                     YDYKNWALSVDGVTSAYVYPLRRGLGTVDIAITSADGVPSEETVRRVQAYIDEMRPVT
                     AKNALVLKPTVTAVPVTVQVKLDGIDLDEAKRRIRTALKEYFDTLIPGDGLTVSQIEA
                     AISNVDGVIDRRLTAPTANRAADTVNRIEWFKAGAINVTEMPS"
     gene            complement(3372..3815)
                     /locus_tag="WJK78_000207"
     CDS             complement(3372..3815)
                     /locus_tag="WJK78_000207"
                     /inference="COORDINATES: protein motif:HMM:NF016736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ7597188.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADEPGAAANVATARRN"
     gene            complement(3829..4176)
                     /locus_tag="WJK78_000208"
     CDS             complement(3829..4176)
                     /locus_tag="WJK78_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HEZ7597189.1"
                     /translation="MDKELNPDTGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            complement(4276..4944)
                     /locus_tag="WJK78_000209"
     CDS             complement(4276..4944)
                     /locus_tag="WJK78_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEZ7597190.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            complement(4941..6086)
                     /locus_tag="WJK78_000210"
     CDS             complement(4941..6086)
                     /locus_tag="WJK78_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ7597191.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            complement(6076..7407)
                     /locus_tag="WJK78_000211"
     CDS             complement(6076..7407)
                     /locus_tag="WJK78_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HEZ7597192.1"
                     /translation="MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDL
                     EDMGMTGRQVQINAVFWGKGYAGRLKKLLDALEQPGGGVLVHPVWGRMHNMIAASWSY
                     RHEADYVDYAGIDITFREAAEAQEIFVFENAFLVELEALIADIDTYREAAIGFVDAVL
                     AVDAGVSALWGSALGIWSAASGTFGAVRRLFDLDKIAFPDRGGYSAAAFKNGSAKLFA
                     DISVMVDTGIRREAGLADNAMHHAGWSPRQRFDGAVAVADRAAAIPDNLLTGRFSDGL
                     QNRLNRLTAKQVQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMRRRM
                     QAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGRLNALVAAAINQKPPLI
                     VRQAPIDGTIHQIAHEFYGDMARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            complement(7407..9578)
                     /locus_tag="WJK78_000212"
     CDS             complement(7407..9578)
                     /locus_tag="WJK78_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRTRC system protein F"
                     /protein_id="HEZ7597193.1"
                     /translation="MANGNMKLSLVLTARDDGARRLLADTQRQLDRTAKSRAQLERQS
                     HTYALTGIRSEKQIQREIMLTQAAFNRLARSGKASQNDLARAAVATRNRIRELNAELK
                     QGTGFADKMGKIGRFGAAAVAGGAAAYTVLKPAMDNRKQLDENINRVSRQAFIEDNSK
                     SAAWIATEGAQQIKDLALELVEKNGGTHDKALDLISGMMTTSLNFAQTKNEAQAAYAF
                     ALASEGSGEDTAKLIKTLKDGGMSGKDLQLGLEHVLQSGLDGTFEVRDMVRELPSLLP
                     AAQQAGMNGVGGLDYLLSLLQSAANKSGSPAEAATNVQNLLSKTLSPYTIGRLKKMAN
                     PNDPKKGVDWIGSVVQGKQNGENAVQVLSRLADAMLVKDKQYQDYKKRAAAGDKTAAE
                     QANMLKGALLAQLLPDLQAKQGLLAATDMTQIREYMASLAGVTLDNGKIAKNNEARML
                     SAAAQQEQQESLAMLRESLTGTLVDMETSFKKLAAEYPNATLALQALTTAATAASAAM
                     LLTAGGGKGAGFLKDVGSKALVWGKASAGGVAAGATAAGGKLLSWGKSAGSGLMNNPA
                     LVKRAGLLGMLLYSESLGDGTLPKGLRGTKTTPEMINRLKNNGIRFEPAPKREQARGG
                     VPQYLAAPSAQPTDKMLSPLFSTQTAAYQAAIQQQTAAYQAALAQDTAAVTTGLAQVQ
                     SAMASASQTINTNVSLNIDGRVIANEVSRYQVAMFGRGAGQ"
     gene            9733..10315
                     /locus_tag="WJK78_000213"
                     /pseudo
     CDS             9733..10315
                     /locus_tag="WJK78_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249360.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10359..10628)
                     /locus_tag="WJK78_000214"
     CDS             complement(10359..10628)
                     /locus_tag="WJK78_000214"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597194.1"
                     /translation="MPKTVRRYGEPRRAVGGGAVKRSYLTAHKSYRQAVILMAKAGIG
                     ADAVRDMCHAELSAWFEDILSSLGIKTPKEEGVIVSKRLRKPEGK"
     gene            complement(10568..10933)
                     /locus_tag="WJK78_000215"
     CDS             complement(10568..10933)
                     /locus_tag="WJK78_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597195.1"
                     /translation="MITVKLTHGLTYNGKVVSELRLKPLTVGGELAAFALIDDLPELP
                     ENATKAELLQRDVLETLTYWSQQIEAQGIPSDILTAQWLMENLSTEDYHTVMAAQEDL
                     CLKPSAATASPDAPSAAEQ"
     gene            complement(10937..11314)
                     /locus_tag="WJK78_000216"
     CDS             complement(10937..11314)
                     /locus_tag="WJK78_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ7597196.1"
                     /translation="MSDATYTGAVIMEVNGRDIEIVSIKPQTTTGRKPVKTMNRNGRV
                     NGYCDGVTEHKLSVTAAIPIDGTEIDWDNITKAKITIYPINDEGRRTSYLDCFTVDTS
                     EQYEVDNEARIDIEMIALHKIKE"
     gene            complement(11379..12788)
                     /locus_tag="WJK78_000217"
     CDS             complement(11379..12788)
                     /locus_tag="WJK78_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HEZ7597197.1"
                     /translation="MPHIDFDTIPGSIRVPGQYIEFNTRNAVQGLPQNPQKVLMVAPM
                     LTAGIQPALEPVQLFSDAEAADLFGQGSLAHLMVRQAFANNPYLDLTVIGIADHSAGV
                     QATATVTLSGTATAPGVVEITIGGKQVSTAVNTGETAATVAGRLKTAITAADVTVTAS
                     GSGVAVTLTAKHKGEIGNESGLTVSTGNTGLTYQANVFTGGAKNADIATALSKVAGKH
                     YHIICSPFSDDANAKALSNHITNVFNAIEQRGCIGVLGMSAALSTATTATGKINDGRI
                     TCAWYKGAVEPNGIIAAGYAAVLAFEEDPAKPLNTLEIKGLAVTPDAQWPWFAECNNA
                     LYNGLTPLTAVNNRVQIMRAVSTYTKSANNTDDPALLDITTIRTLDYVRRSVKERIAL
                     RFPRDKLSDRLLPKVKSEILDVLIKLDQAEIIENAEANKGKLVVARAQNDPNRVNAII
                     PADVVNGLHVFAGRIDLIL"
     gene            complement(12791..12988)
                     /locus_tag="WJK78_000218"
     CDS             complement(12791..12988)
                     /locus_tag="WJK78_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HEZ7597198.1"
                     /translation="MSKIKVTAADGLRVPTEHNPHEYIGQEPVEVDGNSLYYRRMIDD
                     GDLVVVEDAAPNTKTRNTKGE"
     gene            complement(12985..13635)
                     /locus_tag="WJK78_000219"
     CDS             complement(12985..13635)
                     /locus_tag="WJK78_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HEZ7597199.1"
                     /translation="MITDIEQAITDRLKRGLGRMVRTVKSYNGEADDLAGQIHTLPAV
                     WVTYGGSKVEPASTGGVCGRYQDTAEFVVMVAARNLRNEQAQRQGGIDSREIGSNDLI
                     RAVRRLLDGQRLGFADSRGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLEND
                     RYPERTDNPDDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ"
     gene            complement(13625..14047)
                     /locus_tag="WJK78_000220"
     CDS             complement(13625..14047)
                     /locus_tag="WJK78_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HEZ7597200.1"
                     /translation="MAYATVEDMVARFGELEVLQLTDRNNEGLIDREVAQTALVDATA
                     EIDAYLGRFRRPFEDLPPILVRLCCDIARYRLTAAQGVLITDEIRNRYKIDVLDLLRA
                     MAKGEVQLGVDDSGEEVAAGEDGIVFVNGKNKVFGRDH"
     gene            complement(14047..14445)
                     /locus_tag="WJK78_000221"
     CDS             complement(14047..14445)
                     /locus_tag="WJK78_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597201.1"
                     /translation="MAKTNNKPETAETAAPSFEDIKAELDAVQAELAAARNDVEMLTT
                     ALEKAEDDKKALSAELAELKVQHTQRAADALADSRDVMLVSTGADGKEFWRGGLLFDG
                     GWREVKRAEVGEAVWKAICAEPMLQRKAVE"
     gene            complement(14510..15418)
                     /locus_tag="WJK78_000222"
     CDS             complement(14510..15418)
                     /locus_tag="WJK78_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HEZ7597202.1"
                     /translation="MDKSAILTAITAAFRKEFQTGLESVKPDYTAVAMTIPSNTATNT
                     YAWLGKFPQMREWVGSRQIEKMNKQAMSLDNKKFEATVGVARTDIEDDQVGMYRPMMA
                     AMGESAAALPDTLVWGLLKKGKTTVGYDGQYFFDTDHPVYEKSDGTGQNTPHSNLTTG
                     TDNDAPTFYVVDDTKTLKPLIFQNRTDSEFETKFDPSKSDRVFMEDEYLYGSRRRCNA
                     GFGLWQLMHMAEKTALTRENLAAIIVKMQKIKADGGYVLNVKPSLLVVPPELEDKARE
                     LLEADKINGTTNTFKGRLKLHVCVHL"
     gene            complement(15418..16479)
                     /locus_tag="WJK78_000223"
     CDS             complement(15418..16479)
                     /locus_tag="WJK78_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597203.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKSETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEK
                     DSRIAALTAQTAKPDLTKYAPISVVQELQSKVAALTAKQEADKGNELITAALTSGKLL
                     PAQKEWAEGVLKQPGGLAFLTGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            complement(16710..17126)
                     /locus_tag="WJK78_000224"
     CDS             complement(16710..17126)
                     /locus_tag="WJK78_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HEZ7597204.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            complement(17254..18579)
                     /locus_tag="WJK78_000225"
     CDS             complement(17254..18579)
                     /locus_tag="WJK78_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEZ7597205.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLGNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDTYLTLAYKAPDGSLYTTDRGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQSFGTDLYAMLPDLIHEPEYIFYDKSRGKESFVLLGK
                     PLEGNEKYRLMAVLKYLPQYDSIFLDSFRRADEKEIVKSKKRYEMKKGY"
     gene            complement(18566..20134)
                     /locus_tag="WJK78_000226"
     CDS             complement(18566..20134)
                     /locus_tag="WJK78_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HEZ7597206.1"
                     /translation="MAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDNGLLLRTRENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTMATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPNADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPINRTALAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            complement(20134..21756)
                     /gene="terL"
                     /locus_tag="WJK78_000227"
     CDS             complement(20134..21756)
                     /gene="terL"
                     /locus_tag="WJK78_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEZ7597207.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDALPKAIAARRAKVFD
                     PVGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIATANDVKVQVAGSGKKLRGLRHGPYRPDLTILDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWRGVKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYLANKDEMERGAQTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIIIGGYQRETG
                     KLYVVEAQIKKRLPDLIIEDVIRLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFDDEIKSKWSR"
     gene            21768..22280
                     /locus_tag="WJK78_000228"
     CDS             21768..22280
                     /locus_tag="WJK78_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597208.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDGY"
     gene            complement(22277..22783)
                     /locus_tag="WJK78_000229"
     CDS             complement(22277..22783)
                     /locus_tag="WJK78_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEZ7597209.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     AEVEKKFG"
     gene            complement(22786..22983)
                     /locus_tag="WJK78_000230"
     CDS             complement(22786..22983)
                     /locus_tag="WJK78_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597210.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            complement(22980..23246)
                     /locus_tag="WJK78_000231"
     CDS             complement(22980..23246)
                     /locus_tag="WJK78_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597211.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKQDAKADRDNIAASLGRIENKLEKVNEKLDRKADKS"
     gene            complement(23258..23596)
                     /locus_tag="WJK78_000232"
     CDS             complement(23258..23596)
                     /locus_tag="WJK78_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597212.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            complement(23593..23811)
                     /locus_tag="WJK78_000233"
     CDS             complement(23593..23811)
                     /locus_tag="WJK78_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597213.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWAGNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            23824..23994
                     /locus_tag="WJK78_000234"
     CDS             23824..23994
                     /locus_tag="WJK78_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ7597214.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            complement(24039..24344)
                     /locus_tag="WJK78_000235"
     CDS             complement(24039..24344)
                     /locus_tag="WJK78_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597215.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(24241..24660)
                     /locus_tag="WJK78_000236"
     CDS             complement(24241..24660)
                     /locus_tag="WJK78_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597216.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKSAFAKQQVVIE
                     KMKRDKAQAMLLSAQNYARELEQARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            complement(24632..24868)
                     /locus_tag="WJK78_000237"
     CDS             complement(24632..24868)
                     /locus_tag="WJK78_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597217.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSLVSVKRQEVENESRETASE"
     gene            complement(24871..25035)
                     /locus_tag="WJK78_000238"
     CDS             complement(24871..25035)
                     /locus_tag="WJK78_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597218.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            complement(25038..25244)
                     /locus_tag="WJK78_000239"
     CDS             complement(25038..25244)
                     /locus_tag="WJK78_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597219.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            complement(25241..25783)
                     /locus_tag="WJK78_000240"
     CDS             complement(25241..25783)
                     /locus_tag="WJK78_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ7597220.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVAAILRDDY
                     GLTVKTDGTGKGNMPLREAVKLIRGSDVAIEFHTNSAAGKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGHHSRLAYAQAGGIVEPFFISNDTDLALFKTTK
                     WGICRAIADAIAMKLGAARV"
BASE COUNT         5278 a         7303 c         6713 g         6514 t
ORIGIN      
        1 gatagattcc tgccgcgttt gggggctgga ttcccgcttt cgcgggaatg acgaaagagg
       61 cgggaatgac gaaagcggcg ggaatgacga agagtggcag gattggcggg gcataggttt
      121 cgggggattg gcggcgcggc cggtttcggt cggattgctt ggatcggcgg gctgaagccc
      181 atctctacag cccatctcta cagccatctc tacagcccgc tagtcttgca gtgcctcgag
      241 caagctgtct cggtggcggc ggtttcgggg gccggttgat gttcttccac tctctctttg
      301 cggttcttcg ttggtttcag gtatttcggg gcctatcggg gagctggcgg cgtttcccga
      361 ggcggctttg ccgatggcca tccagtcgca actgccttcg taccagttgg taataatggc
      421 ggcggcgtgg ttttttgcgc ggataaacag ccagttgtgt tgccttcgat cgccggtaac
      481 gcgtcccgaa tggcgttcgg atacgaagca tttgacgttg ccgtcggcaa aggcgacggg
      541 gaagacgact tcgttttcta tggggccgcc gcttcgtgtg aacctgtagc tgccggtctg
      601 tatcattgtg ccgtcgggga atctgacaat atccacgccg ccgatggttt ggcgtgtgaa
      661 ttgcgcggca acggcggtgc tgattttttc gtccagccct tggatttggg cggcggtgtg
      721 ggtgtgggcg cggtctgctt tgtcttggag gttttgcgcc agcgtgcccg cgtccagcgc
      781 gccggcgttg acggtttcgc cgtgggactt tatccagaac acggcttcgc ccaaggtgtc
      841 ggcggctttg atgcacagtt ttaaaaccag ggctttgggg cggttttcgt cgccgcctgt
      901 cgccattttg ctgtccgggc gcggggttaa aaagccgttg tcgtttaaat tttcgtccgt
      961 ccaagtcgat acgagcgcgc ttctctgcct ttcgttgtgg tcttcgtaac cgagggctgc
     1021 cgcgtgcggg tggtttaccc agtgtgaaaa tactttgtgg acgtgccgtt tgatttcgtc
     1081 ttcctgcttc gttccgactg ccaagccgtt ggcggcgttg cggataaagc ggtcttccgc
     1141 ctgcgggacg ttttggatgc tgccgtattt tccggtcagc agacggtaca gctcgggata
     1201 agcggtttcg gttacgcgcg tgcggatgtc gtcaaacgcc agccagccgg tcgggatttg
     1261 gtcggacgga aaccatgcgg tgatgccgat gtcggtacgg cttaaatcgg gcaggcggtt
     1321 gctgttgccc agggcgcggt agaggtcggg gaaggtgttt tgtgcaaagg tcgtgccgtt
     1381 ggctttgaga tagcctgcgg ggtttcggac ggctttggga aaggatacga tcgcgccgac
     1441 ggggatgccg tccgaattga gttttttcca tgcggaccag ttgtcgtttg cgctgctcgt
     1501 ttggtggcgt tcgtacacgt cggacgtgta ggcgggataa cccaactgcc tgcaccagcc
     1561 gtgtttcgtg ccggcgatga cttggatatg gcaggcggtg ttttcaacgg gcaggttgga
     1621 gctgccgccc gccgtcggca gggaatagat gccgtctgtt ttgagggtgt tcaaatcgcc
     1681 ccggaaggtt tcgactttga aattgccgat gccgtatccg gacagtgtgt tcggcttacc
     1741 ttcgatgtct tcggcaaaac gcggtttgtt ggctttgtgg aagatgtcgt ggttgttgta
     1801 ggaaatgcgg ttgtttgcgc cgtgcaggcg gagggtgtcg tcgccgaaga cgatgtgggc
     1861 gttgtcggca tccgcgccga tgtaggcttt gtggccgccg ttccagttcg tctggttggc
     1921 ggataaatgg atgccgcttt ggaattgggt ttgggcggta aaggtttttt ggccggtgat
     1981 ggtttggtcg ccggtggtaa ctacagccag cctatttagt gctgccagta attgattagg
     2041 ctgcgactta tccggctgga taccggccgc agtcagcacg gccagcagct cggattgcac
     2101 ttggttgagc caccacgcgg gcaggatggt gcccaattcg gacacgccgt cgccgtcgtg
     2161 gaaggtcttg tcgggggttt cgatggggtg catggtttag tccttatcgg taggtaaatc
     2221 ggatagcggt gtgggcgggc ttgaggcggt tgaacaggct ctcgatcacg gcatcgctgt
     2281 aatcggtcag cctgtcgccc gccgccgaga taccggcgcg gaatcgggta atgcggttgt
     2341 tgccgccgcg cacgttaacg tgccacaccc acatgatttc ctgcggcgca agacggtcgc
     2401 cggcgcggtt tacaccggcg cggaacggct gcggttcgtc gatttggatt tgatagcccg
     2461 ccgcctcggc caaacgcaca aaataaggaa tactcaagcc gcctgtttcg tttagcttgg
     2521 ccatgacggc caacacacgg cgctggcggt ttttgcccgt accgtccaaa cctaatacgc
     2581 gctcccaatc ggccagcatt tggccggcgc tgcgcgggtc gacggcatcg gcaacgcttt
     2641 gagccgattc cgccaccgca tccagcgctg cgccgtctat ttctgcctgc gcccgcacac
     2701 gcggggcatt gcgggcatac gacacggggg gcaacaggcc ccgcaagatg tcttgatagc
     2761 tcatgacggc atctccgtta cattaatcgc gcccgcttta aaccactcga tgcggttaac
     2821 cgtatcggcg gcacggttgg ccgtcggcgc agtcagacgg cggtcgatca caccatccac
     2881 attgctgata gccgcctcga tttgcgacac agtcaggccg tcgccgggga tcagggtgtc
     2941 gaaatattct tttagggccg tccgtatgcg gcgcttggcc tcgtccaagt cgatgccgtc
     3001 gagcttgact tgcacggtaa caggcaccgc cgttacggtt ggcttgagta ccagcgcatt
     3061 ttttgccgtt accgggcgca tctcgtcgat ataagcctgt acgcggcgca cagtttcttc
     3121 cgatggcaca ccgtcggcgg aggtaatggc aatatccacc gtacccaagc cgcggcgcag
     3181 cggataaaca tatgcgctgg ttacgccgtc aacactcaac gcccagtttt tatagtcgta
     3241 acggttgccg cctgcgggcg gtcggcggat gatttccaac agacgcgcca gcagtgaggc
     3301 atcgctttct cggtcggtgc cgccttgtac ggtaaggcgg cattcggtgg ccacaccggc
     3361 gggggcggcc atcagttgcg cctcgccgtc gccacattgg cggccgcgcc cggctcgtcg
     3421 gcgattgccg gtatttccgc cgtgccgccg ctgccgataa cggcgcgggc ggtagtgcgg
     3481 taaaaacgct ggccgatacg cacttgcagg ccgtctgaaa gcatggattg cgcaataccg
     3541 cttacggtca gcgtgccgct ggccgtggta ggattgcggc ggcgcaagcc gcgcatggag
     3601 gcatgccgct ccaaatactc gcggtcggcg gtatcaggga aaatctgccg cacaatccag
     3661 ctttgatgcg catattgccc ttcggcgcag ctggccaaac ggctggcgtg cacataatgg
     3721 tcgctgtcgg ggctgatatc ggcatccggc cacaggcttt tggtatcgcg caggatacgc
     3781 tcgcggattt gctcaaatgt cggcgtttca aacacgttta aaacctcttt aaatcacggg
     3841 cacttcgtgg cggtaatcaa acccgcccgc cgccgtatcc acccggatat gcaggatcag
     3901 gcggccgtcg tgcggctgct ctgcgcgcac ggtaatcttg tcggcacgcc cgctcttaac
     3961 aatcggttgc agtgcctcat cggcatattg ctcggccaac aggctgaccc gttgcaggtc
     4021 tttttcgcgc tgcaacaaat gcagcagcga gccgagcgtt ttatccgccc accagctgcc
     4081 caacggtgtc atcaaacgga tatacacggc attttgcagc gtatcgacgg tgcggccggt
     4141 atagtcgccg gtgtcggggt ttagctcttt gtccatgttg gcattttgcc gttttcagac
     4201 ggcctcacgg agtacacggg cttcaatccc gcacgcacaa aaaagcagcc cgaaggctgc
     4261 caaaggtctg cttgtctatg ccggttccgc cggtaaggtt ttgccgccga tgctgtcggt
     4321 atgcgggtgc tggcgcaacg atatattgcc ggccaccacg tcgccgtcgg tgttaaagct
     4381 gccgcccgtt tggttaacat cgccgctaaa ggtggctccg tcgccgccct cgacggccat
     4441 gccgccgttg ccgttgattt ggccttgcgc cgtcaacact gcactggtct ccaccaacgg
     4501 agcgttaaat ttggcatccg tggccgcatt aacctcgtat tgtttgcagt taacccggta
     4561 cacgtcgcaa tcggcctcaa tgattttgcc ttgcttaatc acgatttttg caccctcatg
     4621 attaaaaatc gccgtctcgc cgggcttaag gtttttgatg cggtagctgc cgtgctggct
     4681 gcacacaatc acaccgtgcg aagtattgcc gcccagcggt atcactaccg cttcgctgcc
     4741 gtcgggcgga tggctggcaa agccgtattc ctgcaaatgt tcaaggtctt gcagggtttc
     4801 gtcggccaag ccgctcaact gcacgcgctg tatcggctcg gacgacacca ccagcgtgat
     4861 ttttccccga aaggccgcgc gcagggtttc gccgatattt ttagcagttt gtgccgtttt
     4921 tttcgccaat ttactcaaac tcattcaaac accgccgttt ctgcttgttt tttgccgcct
     4981 tttttgccct tatggctcac gcctttgcgt ttgcctttgc gcttgcgcgc cgcctcggcc
     5041 tttttggggt aagcgtcggg tgtccaaata ccgtcctctt tgagccgcag ctcggtttgc
     5101 gtgccatcca tgcgggatag cataaaccgc cgccccatca gaaaaaacac cgcatcgata
     5161 ccgtgctcgt cgtcgatcac atgcacacgc tggccaggtt gccacaatac gccgtcgcgg
     5221 gttttatggc cgcccacggt tatcgtgagt gtaaatccct ccagccgcca gtcggccagc
     5281 tgctttttag cctgcttttg caatgcggcc aaattgtcgg catcggacac caccaccgtt
     5341 ttagggcggt gcagcgtcat cgtcgggtct ttgtacaccc actttaaatc gtgtttggcg
     5401 ctgtcgccgc tgcggccgtg cgattgcgcc aaaaaagtaa cctcggaaaa gcggttgtcg
     5461 gtatcccact caatgtccat gcgctcgata ttgcagcggc tgtcggtgcg gctccaacac
     5521 aatgtcgcca ccggcgggct gctgtaatcc gcaccgccca ccaccaacgt gccgtccggc
     5581 tccagccacg gatgcagccc gaccgagttg gcaatatggg ttaatgcctg ccatacggtt
     5641 tcgcccggct cgatgtcgat tttgtccaaa gcggggttgt tttcggcctt aagcaccacc
     5701 gctttaatct gcggccacgg cgcggccagc tttttggctg catccaatac cgtcatgccc
     5761 tttacattga gctgcggcgc ggagcaatcc accaaaaaac cggccaaatc acgcccgctc
     5821 aagctcaact cgcggctgcc cttgcttttg ccgtggcgct ggctgccgat gatgcccgtc
     5881 atcacgattt gcccgtctat cactacctcg cagctctctc cgcttaaatc gggtatggcc
     5941 gcctccggcc ccaacctgcc gatgacaaaa tcgaagctgt cggcagggat taaaaagtcg
     6001 ctgtcgatgt cgtagcgctc ccagtggcgg tgctctttac cgcccacgcg caccgacacg
     6061 gcatagccgt atgaattatt ttgcatagct gttgaccaaa gtgccgcgct tgataaacgc
     6121 ggggtggtgg atatggggat tgagccgcac cagctctgct gcgcgggcca tatcgccgta
     6181 aaactcgtgg gcgatttggt gtatcgtacc gtcgattggg gcttggcgca caatcagcgg
     6241 cggcttttgg ttgatggccg ccgcaaccaa cgcattcaga cggcctgccg ccgcgcgcag
     6301 ggattctgcc gtttggtaag cctcggtata cacggcgttg gccgtcagcc caccagactc
     6361 ggcagcagcc gtctgcaccg cccgcaaggc ggcaatctcg gcctgcatac ggcggcgcat
     6421 ggcgcggtta acctcaatca aatcgggcgc ggtcatctct tcgccatgcg cctcgattaa
     6481 tgccgttgcc accgacaaca gcgatgacgt ggataacagg cgcaccgcct gcgctaccgg
     6541 ctgcacctgt ttggcggtta accggttcag gcggttttgc aggccgtctg aaaagcggcc
     6601 ggtcagtaaa ttatcaggga tagcggcggc acggtcggca acagccacag ccccgtcaaa
     6661 ccgctgtcgc ggcgaccaac cggcatggtg catggcatta tcggccaaac ccgcctcacg
     6721 gcgtatgcca gtatctacca tgaccgatat atccgcaaac agcttggccg agccgttttt
     6781 aaacgccgct gcgctgtatc cgccccgatc gggaaaggca attttgtcca aatcaaacaa
     6841 acggcgcacc gcaccaaacg tacccgatgc cgcactccaa atgcccagcg cgctgcccca
     6901 taaagccgat acgcccgcat ccaccgccaa caccgcatca acaaagccga tagccgcctc
     6961 gcggtaggtg tcgatatcag caatcaacgc ctcaagctcg accaaaaagg cgttttcaaa
     7021 aacaaagatt tcctgcgctt cggccgcctc gcggaaagta atatcgatgc ccgcataatc
     7081 cacataatcg gcctcatgtc ggtaactcca tgatgccgca atcatgttgt gcatccgccc
     7141 ccaaacaggg tgcaccagca cgccgccgcc cggctgctcc agcgcatcca gcagcttttt
     7201 cagacggcct gcatagccct tgccccaaaa caccgcatta atctgcacct gccgcccggt
     7261 catgcccatg tcttcaaggt cgataccctg cacaaacggc cgcgcatgct cggccaatgc
     7321 cttgccgttg ctctcgtcca ccacctcaat atcaaagccg acgcccttgt aagatgcgtc
     7381 ctgcaataag gtatgccatc cgctcattat tgacccgctc cacggccgaa catggccact
     7441 tgataccgcg atacctcatt cgcgataaca cgtccgtcga tattcaggct cacattggta
     7501 ttgatggtct gacttgccga cgccatcgca ctttgcactt gtgccaaacc tgttgtaact
     7561 gcagccgtat cctgcgccaa tgctgcctga tacgccgccg tctgctgctg aatggctgcc
     7621 tgatacgccg ccgtctgagt tgaaaacaac ggagacaaca tcttatcggt aggctgcgct
     7681 gacggagcag ccaaatactg agggacacca ccccgcgcct gttcccgctt cggcgcaggt
     7741 tcaaatcgga taccgttgtt tttcagacga ttaatcattt caggagttgt cttggtacca
     7801 cgcaaaccct ttggcaatgt gccgtcaccc aaagactcgg aatacagcaa catacctaac
     7861 aaacccgccc gtttaactaa cgctggatta ttcatgagcc cgctaccggc agattttccc
     7921 catgacagca acttaccgcc tgccgctgtg gcacctgctg ccacgccgcc tgcggaagcc
     7981 ttaccccata ccaacgcttt actacctaca tctttcagaa agcctgcacc tttaccgcca
     8041 ccggcggtta ataacattgc ggcagacgcc gctgttgccg ccgtcgtcaa tgcttgcagg
     8101 gctagagtgg cattagggta ttccgctgcc agctttttaa acgaggtttc catatccacc
     8161 aatgttcccg tcagactttc ccgcaacatt gccagcgatt cctgttgctc ttgttgcgcc
     8221 gctgccgaca acattcgcgc ctcgttgttc ttagcaattt ttccgttatc caacgttacg
     8281 ccagccaacg aagccatata ttcacggatt tgcgtcatat ccgttgcagc cagcaaacct
     8341 tgttttgcct gcaaatcagg cagcagttgc gccaaaagcg cgcccttaag catatttgcc
     8401 tgctccgccg ccgtcttatc gcctgcagcc gcgcgtttct tataatcttg gtattgctta
     8461 tcctttacta gcatggcatc ggcaagacgg gacaacacct gcactgcgtt ttcgccgttt
     8521 tgcttgcctt gcacaaccga gcctatccaa tcgacacctt tcttcgggtc atttggattt
     8581 gccatcttct tcaaacgacc tatcgtgtaa ggcgacagag ttttactcaa aagattttgc
     8641 acattagtcg ccgcttcggc aggactgccc gatttattcg ccgcagattg taagagtgag
     8701 agcaggtagt ccaaaccgcc gacaccattc atccctgcct gttgcgcggc agggagcagg
     8761 ctcggcagct cccgaaccat atcccgcacc tcgaaagtgc cgtctaaacc cgattgcaag
     8821 acgtgctcaa gcccgagttg caggtcttta ccgctcatgc cgccatcttt cagggtttta
     8881 atcagttttg ccgtatcctc gccactgcct tctgaggcaa gtgcaaaagc atatgccgcc
     8941 tgcgcttcat tcttggtttg ggcaaaattc agactggtgg tcatcatgcc gctgattaaa
     9001 tccaaagcct tatcgtgggt cccgccattt ttctcgacaa gttcaagtgc caaatccttg
     9061 atctgttgcg caccttcagt tgcaatccac gctgccgatt tactgttatc ctcaataaat
     9121 gcctgtctgg acacgcggtt gatgttctca tcaagctgct ttctgttgtc catagcaggc
     9181 ttaagcaccg tatacgctgc cgcgccacca gccaccgcag ctgcaccgaa tcttccgatt
     9241 tttcccatct tgtccgcaaa tcccgtgccc tgtttcagtt ccgcgttcag ctcgcgaatt
     9301 cggttacgcg tagcgaccgc cgcccgtgcc aaatcatttt gtgatgcctt gccgctgcgc
     9361 gccaaacggt taaacgcagc ctgtgtcagc atgatttcgc gttgaatctg tttttctgag
     9421 cggatgccgg tcaacgcata agtatggctt tgccgttcaa gttgcgcccg cgatttcgcg
     9481 gtacgatcta attgtcgttg agtatcagcc agtagccgtc tcgctccgtc atctcgggcg
     9541 gttaacacca acgacagttt catgttcccg tttgccataa aaagcagcct ttaaacgtat
     9601 taactcaagg tcaattatcg tttaaaggct gtttaaggga ggcggtatgg gcttcaaccc
     9661 cgttttcgtg ctttatttgt ttgttgcgtt ataataccag aatgataacc attttattca
     9721 aagggatatt ttatgaatat gaaaaaattg atttccgcaa tttgtgtttc aattgtttta
     9781 tcagcctgca accaacaatc aaaaacggca caagccgaag aacctgtcca aagtatccag
     9841 gctgctgatt gtaccgcccc aatggacatc acagttgaac aatatctcat caatttggag
     9901 caagcattta aaactcagaa cgtctcaaca aaaatccata ataaaaatat tgtcaagacc
     9961 gattgtggtt atgaccttac tttggtaatg gattttgggg cgattgcgct caaactggac
    10021 gagcagcaaa aaattagagc tatctcagta ggctacattt taaaaaccga cggagagaaa
    10081 ggacaaaatc tagtcaataa tgccataaat ggattacaca gtattcaggc agttctgtct
    10141 ttaactacca cagacaaatt gggcgaatcg gaagcaggaa aacaacttcg tcaaagaatc
    10201 caatcagaca ggagcaacag cgcaaaaaga cgttccggca gatggtattt tatatagcgt
    10261 tgtttttgaa aaagaaacaa acaccattgc aataatcggc agaaaacaac cctaaccgtc
    10321 aaataaaaaa aaggtcgtct gaaactcaga cgaccttttt attttccctc cggctttctc
    10381 agccgtttcg acacaatcac tccctcttcc ttcggcgttt ttatgcccag gctcgacagg
    10441 atgtcttcaa accatgccga cagctcggcg tggcacatat cgcgcactgc gtccgcccct
    10501 atccccgcct ttgccatcag gatgaccgcc tgacggtagc ttttgtgtgc cgtcaggtag
    10561 ctgcgtttta ctgctccgcc gccgacggcg cgtcggggct cgccgtagcg gcggacggtt
    10621 ttaggcacaa atcctcctga gccgccatca cggtatggta gtcttcggta gagaggtttt
    10681 ccatcagcca ctgcgccgtc aggatgtcgg atgggatacc ttgggcttca atctgctgcg
    10741 accagtaggt cagcgtctct aggacgtcgc gttgcagcag ttcggctttt gtggcgtttt
    10801 cgggcagctc gggcaagtca tcaatcaggg cgaacgccgc cagttcgccg ccgacggtca
    10861 gtggcttgag gcgtaattca gatacgactt tgccattgta ggtcagcccg tgggtcagtt
    10921 tgacggtaat cacgcattac tccttgattt tgtgcaaagc aatcatctca atgtcgatgc
    10981 gtgcctcgtt atcgacttca tattgctcgc tggtatcgac ggtaaagcag tcgaggtagg
    11041 aagtgcggcg accttcgtcg ttgatggggt aaatcgtgat tttcgccttg gtgatgttgt
    11101 cccagtcgat ttccgtaccg tcgatcggaa tggcggcggt aacgcttaat ttgtgttcgg
    11161 ttacgccgtc acaataaccg ttgactcggc cgttgcggtt catcgttttg accggcttgc
    11221 ggcctgtagt ggtttgcggt ttgatgctca caatctcgat atcgcggccg ttcacctcca
    11281 taatcaccgc gccggtatag gtagcgtcgc tcatgcttta tcctttttta aggtttcaga
    11341 cggcctttaa acctgtttta aacgccgtct gaaaagggtt acaaaatcaa atcaatgcgc
    11401 ccggcaaaga cgtgcaggcc gttgaccaca tcggcgggga taatggcatt aacacggttg
    11461 gggtcgtttt gcgcacgcgc caccaccagc ttgcctttgt tggcctcggc gttttcgatg
    11521 atttcggctt ggtcgagctt aatcagcacg tccaaaatct cgctcttaac cttgggcagc
    11581 aggcggtcgc tcaatttgtc gcgcggaaaa cgcagggcaa tgcgctcttt aacgctgcgg
    11641 cgcacataat ccagcgtgcg aatggtggta atgtcgagta gtgccgggtc gtcggtgttg
    11701 ttggccgact tggtataggt tgatacggca cgcataatct gcacgcggtt gttgaccgct
    11761 gtgagcgggg tcaagccgtt gtacagcgca ttgttgcatt ctgcaaacca cggccattgc
    11821 gcatcaggtg taacggccag ccctttgatt tccagcgtgt tcagcggctt ggcagggtct
    11881 tcttcaaagg ccaacaccgc cgcataacct gcggcgatga tgccgtttgg ctctaccgca
    11941 cctttgtacc aagcacaggt aatgcggccg tcgttgattt tgccggtagc ggtggtggcc
    12001 gtgctcaagg ccgcactcat acccaatacg ccgatacagc cgcgctgctc gatggcgttg
    12061 aatacgttgg taatatggtt gctcaaggct ttggcgttgg cgtcatcgct aaacgggctg
    12121 caaataatgt gataatgctt gcccgccact ttggacaagg ccgtggcaat gtccgcattt
    12181 ttggcaccgc cggtaaagac attggcttga taagtcaggc cggtattgcc ggtgctcacg
    12241 gttaagccgc tctcgttgcc gatctcgcct ttgtgtttgg ccgtcagcgt aacggctacg
    12301 ccgctgccgg atgcggtaac ggttacatcg gcggcagtga tggcggtttt cagacggcct
    12361 gccactgtgg cggcggtctc gccggtgtta acggccgtgc ttacctgctt gccgccaatc
    12421 gtgatttcca ccacgcccgg cgcggtggcc gtgccggaaa gggtaacggt tgcggttgcc
    12481 tgcacgcctg cgctgtggtc ggcaataccg ataacggtca aatccaaata agggttgttg
    12541 gcaaatgctt ggcgcaccat caaatgcgcc agcgagcctt gtccgaacaa atcggccgcc
    12601 tcggcatcgc taaatagttg caccggctct aaggcgggct gtatgcccgc ggtcagcatg
    12661 ggtgcaacca tcaatacctt ttgcggattt tgcggcaaac cttgcacggc attgcgggtg
    12721 ttaaattcaa tatactgccc gggcacgcgg atgctgcccg gaatcgtgtc aaaatcaata
    12781 tggggcatca ttactctccc ttagtattgc gggttttggt atttggggcg gcatcctcaa
    12841 ccaccaccaa atcgccgtca tcaatcatgc ggcggtaata caggctgttg ccgtccacct
    12901 ccaccggctc ttggccgata tattcgtgcg ggttgtgttc ggtcggcaca cgcaggccat
    12961 ctgccgccgt tactttgatt ttgctcattg cttatcctta agggttaggt ttacaggtat
    13021 ttcatcggcg gattgcgggt cgtaaatttt gccgtccaac ccctcgaaat caggccacgg
    13081 ctcgctcaat gtaccctgat acttggtaaa gatatggttg gggtcgtcgg gattgtcggt
    13141 gcgttcgggg tagcggtcat tttccaaccc gcaggtgtta aagcggatgg catactcaac
    13201 cgcatatatg cttactgcgg cgttttgcac cagcacatga ttggcaatcg cgcgcaccgc
    13261 tttgggcacc aagccgcggc tatcggcaaa accgagccgc tggccgtcaa gcaggcggcg
    13321 aacagcgcgg attaaatcgt tgctgccgat ttcgcggctg tcgatgccgc cttgccgctg
    13381 cgcctgctcg ttgcgcagat tgcgggccgc caccatcacc acaaattcgg cggtatcctg
    13441 ataacgtccg catacgccgc cggtgctggc aggctcaact ttgctgccgc catacgttac
    13501 ccaaaccgca ggcagcgtat ggatttgccc cgccaaatcg tcggcctcgc cgttgtagct
    13561 tttaaccgtg cgcaccatgc gacccaagcc ccgtttcaga cggtctgtta tcgcttgctc
    13621 aatatcagtg atcacgcccg aacaccttat ttttaccgtt tacaaacaca ataccgtctt
    13681 cgcccgcggc cacttcttcg ccgctatcat ccacgcccag ctgcacttcg cctttggcca
    13741 tagcacgcag caggtcgagc acgtcgattt tgtagcggtt gcggatttcg tcggtaatca
    13801 acacgccctg agccgccgtc agacggtagc gggcaatgtc gcagcaaagg cgcaccaaga
    13861 tgggcggcag atcctcaaaa ggtcgtctga accgccccag atacgcgtcg atttcggcag
    13921 tggcgtccac cagcgcggtt tgtgcgacct cgcggtcaat cagcccctcg ttgttgcggt
    13981 cggtgagctg caagacttcc agctcaccga aacgcgcaac catatcctca accgtcgcgt
    14041 atgccattac tcgaccgcct tgcgttgcag cataggctcg gcgcagattg ccttccacac
    14101 cgcttcgccg acttcggcgc gcttcacttc acgccagccg ccgtcaaaca gcaggccgcc
    14161 gcgccaaaat tctttgccgt ctgcgccggt actgacgagc atcacatcgc ggctgtccgc
    14221 caaagcgtcg gcggcgcgtt gcgtatgctg cactttgagt tcggcaagtt cggcggacag
    14281 tgcctttttg tcgtcttcgg ctttttccaa ggctgtggtc agcatttcga catcgtttcg
    14341 ggcggcggca agctctgcct gcacggcgtc caattcggct ttgatgtctt caaacgacgg
    14401 ggcggcggtt tcggcggttt ctggtttgtt gttggttttt gccatgatga ctccttgttt
    14461 cagacggcct ttaaataggt gttaaaggtc gtctgaaaac ggttcggggt tacaggtgga
    14521 cgcaaacgtg cagtttcaga cggcctttga aggtattggt cgtgccgttg attttgtcgg
    14581 cttccaataa ttcacgggct ttgtcttcca gctcgggcgg aacgaccaag aggctgggct
    14641 tcacattcaa cacatagcca ccgtcggctt tgattttctg cattttgacg ataatggcgg
    14701 cgaggttttc gcgggtcagc gcggtttttt ccgccatgtg catcagttgc cacaaaccga
    14761 aaccggcatt gcagcggcgg cgcgatccgt acaggtattc gtcttccata aacacgcggt
    14821 cggatttgga cgggtcgaat ttggtttcaa actcggagtc ggtgcggttt tggaaaatca
    14881 gcggcttcag ggtcttggtg tcatcgacga cgtagaaggt cggcgcgtcg ttgtccgtac
    14941 cggtcgtcag attggagtgc ggcgtattct gacccgtgcc gtccgatttc tcgtaaacgg
    15001 ggtggtcggt atcgaagaaa tattggccgt cataaccgac agtggtttta ccttttttga
    15061 gcagacccca caccagcgta tcgggcaggg cggcggcgga ctcgcccatt gccgccatca
    15121 tcgggcggta catgccgact tggtcgtctt cgatgtccgt acgcgctacg ccgacggttg
    15181 cttcaaactt tttgttgtcg aggctcatcg cctgcttgtt cattttttcg atttggcgcg
    15241 agccgaccca ttcgcgcatt tgggggaatt tgccgagcca cgcataagta ttggttgccg
    15301 tattggacgg aatggtcatc gcaacggcgg tatagtcggg cttgacggat tccaaacccg
    15361 tttgaaattc tttgcggaat gctgccgtga ttgcggtcaa aatcgctgat ttgtccatta
    15421 cttaccttcg ctttctttga tttttacaaa ttcttcgccg gacatgccca gcatttttgc
    15481 tgcggctgcc tcttccgcag tcagtgcggc gacgcgttcg tcgggtgctt taccgcccgt
    15541 ttgcgagcct gccagtgcag cgaccggctg ggcgttttca ataaagccgg tcaaaaatgc
    15601 caagccgccc ggctgtttca atacgccttc tgcccactcc ttctgagcag gcagcaattt
    15661 gcctgaagtc agcgcggcgg taatcaattc gttgcctttg tctgcttcct gcttggcagt
    15721 cagcgcggcg actttgcttt gcagctcttg aaccactgag ataggcgcgt atttagtcaa
    15781 atcaggcttg gcggtttgcg ccgtcaatgc cgcgatgcgg ctgtcttttt ccgccagctg
    15841 cgcgaacacg tcggcagaca atgccacgtc tttcggcttg gcttccacga gcgcggacaa
    15901 tgccgccttc agttcttctt cgcccgcatc aggcagaccg aacagttgct gtaacaactc
    15961 tttcataggg ttttgctccg tttccgattt taaaatttgc gccgacgctg ccgccagcac
    16021 ctcgtccata ccgtccaacg cggggaaatt tgtcagcgcg gcgtgaaaaa ttttgcttac
    16081 atatcccttt gtgtcatagg aaaacacagc agagatgtag cgatactctt ttgcggcaat
    16141 tgccgcagcc gccttgtccg tccactccac ttcggcaaac atgcctttag gcgtgaactc
    16201 cagccaacgc atccaaccgg cggcaggtgc aggttgtccg tttttctctt tgtagagcgt
    16261 ctggtgttca taatcgacaa ccaactgatt gcgcgagctg ttggccaaca acgcgacatc
    16321 atgaccgttt tcttcggtca gataccacgc agggacatca gtcggacgac cgtctactgc
    16381 gcgaaattcg ccatatggca gcagttggat tcgcccgtct tttggctgca cctcgaaact
    16441 gcacacggca agtagggttt tttgtgcatt tttggacatg tgtacctctc tcaatacggt
    16501 cattttgcct atttgaaaaa acaacaaaga gtaggcgtgc ttcaaaccct cccgccattt
    16561 ttttaaaacc tgtccgcgcg atacacaatt aatcgttttc aggggctttt tagaagcgtc
    16621 taggattgat ttttatatct tgggcagggg tttgtattac ccgcataaaa aaacgcgcta
    16681 aaaagcgcgt ttttgagggt tttataaatt cacggtatca gacccgaaaa ataatcctgc
    16741 acatcgtcca tcaaagcctg tttgtcgtcg tccgtcagcg tcaaaaattc ccgttgcgga
    16801 atccgaactt tgcggttgcg ccccgccata ccgccgaagt tgtggatggc ggcatagacg
    16861 atattcgtac cgacaagggc ggtatcgttg tctgacagtg tggaaaaact gtctttcaga
    16921 cgacccgaat ccgaaagcgg cttgccgtcg cggtatttta gccccaacca tttcggacgg
    16981 cctgcgtagc ggaaattgag cttgaccgcc gtgtgcatgg tttcggacag tcggcgcatc
    17041 agcaggtagc ggttttcgat cccgttgcca agccgctcga tttggtttag gacgacaaag
    17101 atattgtcta ttttgacatc aatcatggta ttatcctgcc taggctacta aaaaagcggt
    17161 gaatttgtct gccctccgca gcccttatgc agtcctcgga ctgggattgg tatccgttac
    17221 ataagcgaga gtgtgtcggg attgcagtcc gacttagtag ccttttttca tttcatagcg
    17281 tttcttactt ttcacaattt ctttttcatc cgccctgcga aacgaatcca aaaaaatcga
    17341 atcgtactgt ggcagatatt tcaaaactgc catcaatctg tatttttcgt tcccctccaa
    17401 cggttttccg agcaaaacaa aactttcttt tcctctgctt ttgtcataaa aaatatattc
    17461 gggctcatga atcagatcgg ggagcatggc atataaatct gttccaaacg attgcccctc
    17521 ccgactgtcc acctgtttga ccaatgtatc atcagacagc cacaccgtcg ctcgtgtcat
    17581 acctgccaat tcttgcgttt ccttgctcaa tacacccgca gcaaatttaa gctgtcttga
    17641 tagcgcattt cggattttga ttttctgctc tttatcgggc ttgccatcaa tatccaaacg
    17701 ttgcttgact tcataaaact ctttttcaag ctgtttaaag ctggttttaa aatccgcacc
    17761 acccatttcc gctttggcaa attgatgcgc caacgcacgg tcgtacttgt ctaaatcggg
    17821 gcggtagttc attcgtccgg cgttgtaatc aaatcctcga tcggtcgtgt acagactgcc
    17881 atccggtgct ttataggcaa gggtcagata agtatcgcct tttttgttgt agattttatg
    17941 ggtctcgact agattgtccg ccgtgctttg cccgacaatc cgcccctggc gttccacatc
    18001 ccgctccgac agcgcgatga ccgagcaacg gcagttgtag ccgttgggcg ggtaaaacgt
    18061 tgcccaaaac gggtcgtcgt agcggtacac cagcccgtct attgccgaat gcgccggacg
    18121 ggtgcggctg tcgcctaccg cgtcatacat ccaatagggc cgtgcatcaa tatttgccat
    18181 atatccttga tattgaccgg cgttgtaggc agtttgcatg ttggtacggt aaatcgtctc
    18241 caacctccgc ggcgaaccga atacctcgcc ggtggctggg tcgatgatat ccttaccgtt
    18301 atgcccgttc ggatgcagcc agcccttgtt gccgagcaga ttcaagatac cttttcgcca
    18361 atcgtcaaac gactgtccac tttttgccga ttcaaccatc gaagttttga tgtcgttgag
    18421 catatccaag tcggtcatgc gggcaatcgt atagactttg gcaatttcgg aggctgtcag
    18481 attgcggtag ctctccgccg taaccttttt actttccagc cactcgattg ccttttttgg
    18541 cggcagactt aaggcaaatc ccaaatcagg cgcgggcatg gtcttgtccc aaaatatcgc
    18601 tgataaacaa ggcctgctgc atataggtac gcagtttcgc gttgtccaaa ttcggataaa
    18661 gcgcattcag tgcggcatct gcctcctcgt agctgttgca agcattaagt gcggcaaccg
    18721 cctgacgcac catcgggttg agctgagaat tgaaatcggg ctcaaccagc gcgtcatcca
    18781 acgcgccgtc caatatttcc tgatgcctgc ccgtagcctt agatggtacg gtgtgggcgg
    18841 ataaagccgc caatgcagtt ctgtttatcg gattgtccgg tacctgccgc accaacacag
    18901 cctcaccctc ctgcacatct ggaatgacca gtttgtcgcg cacccagctt tcggggattt
    18961 gtacgccgac atccaccagt ttcgggatag cgtcggcaaa gaccgcgatg tctttcggct
    19021 cgcgcgtgtc aaattcaaat ttcggcacgc ggtttgggtc ggcattggga tagttgattt
    19081 gcaggaacgg tccgatgatt tggcttgtga tggtttgcgc cacctgtttt gcgtccgaca
    19141 ccagcaaatc gcggcgtacc tcgttgtgga tattgcccag cgcgttggtg ctggattttc
    19201 cgtccgcacc gctggttagc gtttgcccca aaatcagccg cgccgccgat ttttcgcacc
    19261 agtcggccat ctgcaaaaac ggattgctgg ttgccatcgt accgcttgca gcgttgtgca
    19321 gctcgatttc cataccttct ggcatgatgc ctgccgcgtt gtgaccgatc tccgccaccg
    19381 ctcgaagcag ggtgtttttt tcctctttgg ttgcgcccgc gccgtatttg ccgatacgga
    19441 tgggcatgcc gtacagctcc aaaaactcgg caaaatcgtg gacggcgtag tgtttgaaca
    19501 tatacagcca ggaaagcgtg cggaaaagcc cgttgcgcgc ctgctggacg ctgcgcgatt
    19561 tttgggtatg aacgacccag cccagcggcc acaacgcttc gccttccgga ttttcgcggg
    19621 tacgcagcag cagcccgttg tctttgtccc atttgaacca gctttgcggg cggtggataa
    19681 agtttcgggg taggtaaagg ccgtctgaaa atacccactc gacctccaac gcagaaaatc
    19741 cgtgccctac cgcgtccatc aaatccataa tcaggtcttc gagggtaggc aggctgtcca
    19801 tcatttcgta ggcttggtcg gacagctttt cttcttcggg cgtcgcattt cgcggcgggg
    19861 cgacgcgcca gttgagcgtc agcagcgcgc gtttgcgcgt ccccatattt gccgcgatgt
    19921 cgctgtcgcg ctcctcaatg tccgcgaaaa gctcgtgttg ggcgcggatg tcgccgcttt
    19981 ccgcatcctc gaagagggcc cgcatctttt gcggtgtaat aaaattggac ggatgctcgg
    20041 cgataacccg accggtcgcc gtaatttgag ccacgtccgt ctgcaatgca gcttcgggct
    20101 tttggatttt agttttattg ttcttttttg ccattatcgg ctccatttac tttttatctc
    20161 gtcatcaaaa tcgttatcgg tagggctttg ccattctatc ggcacacaat tggccaccgc
    20221 ccccgaccag agcatatgca ctgcatcagg accatcatca tgatcagcct ttggaaaatg
    20281 gcggaactgc tgtatcagcg tctgttggct ctcattcaac agaatcaaac cgttcgccat
    20341 gtgaggctgt aaagtctcaa tccgcaagag cttgtccgat accggcttga ccgcccgcgc
    20401 cgggacaggt attccacgcg ccgcgctgcg cttgaccagc tcatctttca aaaattcctg
    20461 aaactgaacc gtctcaacaa accacagttt gcaacgatat tgacggtgca atctgataac
    20521 gtcctcaata atcaaatcag ggagacgttt tttaatctga gcttccacga catacagttt
    20581 gccggtttca cgttgataac cgccaatgat aatcgccgac gggtcacggc tcgcccccgc
    20641 tttacccagc gacgggtcga gcgcaccgaa atacaccaaa tcggacggca ggtcgttcca
    20701 aaacttcatc gacttggcaa acggcgcatc ttcgccgctg accgggtcgt tttgatactc
    20761 gctgtcaaat gtcgcatgac cgtcacgggc gcggattttc atcagcgcga gtacgccgcg
    20821 agccgcccag cttgtttgcg cgccgcgctc catctcgtct ttattggcga gataaaacgc
    20881 ctcggccacc gtctcgccgt cgtttcggaa aagttcctcc catctgtccc acaagtccat
    20941 gcggtcgggc cagcgtttca tcgccttaaa cttaacaccc cgccaaaacg gattattcag
    21001 ggtgcggttt agcacgctgt cgtaatgcaa aatcgtgccg atataaatca catcgtattt
    21061 ctgaccgaca ccgcccaaag gcaatacagt cttagtcagc cacgcattga gcttgtcgcg
    21121 ctgttcgggg ttgcggactt gctcgtcatt ctcaatatcg tccaatatgg tcaggtcagg
    21181 acggtaaggg ccgtgacgca aaccgcgcag ctttttaccg ctaccggcca cttggacttt
    21241 aacgtcattg gccgtcgcaa tcgtaccggc ctgccatacg cggccctgcc cgcatacttc
    21301 cggaaagtcg gttttcaagc gcggattaaa ttccaattcc gccttgatgg cttcgagcat
    21361 cgggtatgcc tgatctatgc tgtccatcac aataacggca taatgttttt ggcctgtcac
    21421 aatacaccac agcgtaaaca actgagtaac ctgcgtcgac ttaccctcgc cacgcggcgc
    21481 acccaccgcc tcattttccc ctttggggga gcggataatc tccggcagac ggctgaataa
    21541 aaacgcatgc agttcggatt tttcagggga gcggatataa tgcggaaagt aggtgttgac
    21601 gaaatactcg taaccgccta ccgggtcaaa caccttggca cggcgtgcag caatagcctt
    21661 gggcaacgca tcaaagccgt ccacttccgc ttcgatgact tggcgcaaac tggcggccag
    21721 ttcggcaagg gatttgagga attcttttgt tttcatgagt atttataatg actggattca
    21781 tttctaacgc atttataggc ctaaaagaag caggatcact tttaaaaggg tttaaccagc
    21841 tcaaaacaga ggcagaggta gcgcaaaaaa ccatcgaact taatcaaatc attgctggta
    21901 ttcaaactga tttatttgaa gcccaatctt cttatacggc ggcaattagc cgtatagatg
    21961 agttggaaaa agaactggtg gcagtaaaaa attggtctac agagaagcaa cgctaccaat
    22021 tgtatgaact tgctcctggt tctttcgtct atcgattgaa aacagagatg gcgaacagcg
    22081 agccaattca tgatatttgt ccccaatgtt acgagcaggg tgtcaaatcg attcttcaat
    22141 tcaatgggta tgaaggtgct tttcataaat attcctgttc ccgttgccaa accataatat
    22201 tgggagagcg tttaaagtca gatgttgaag tattttcagt aggaggatca cgttatggga
    22261 gattgataga cggctattaa ccaaacttct tctccacttc cgccccaaac ggctccaata
    22321 cctccacaaa ggcaggcaaa tgtttgggat gtttttcttg cacaaacgcc atcaagaact
    22381 caatcaattc caaagccgtc gccagttttg acgtttccgg catcacacgc gcattggccg
    22441 atacggtttt cgtaaacgca tcggccaggc tggccaacag cttggcgcgg tcggacgggg
    22501 gcaaatcttc ggtactcgaa tcctgcagca tcgtcatcgt gctgttgtac tgcaccataa
    22561 aaccggccaa catcgcacgg ctcaagtcct caataccgcc gccggccaaa gtgtaggcgg
    22621 cgcgcatctt atcccagtcg tcgccttttt ccttatccgc acgtttccac gcacgcgcag
    22681 tggtctgcgg gatttcgcac atcaaggccg ccgtttccaa agtttgctcg ccgctcacat
    22741 agagccgacg taacttttca cggatttctt gcgggtgagc cataattaca gtcccatttt
    22801 cgctttaagc aattcccagc cgaccgtaat cacgccgccg cccagtgcgc cgaatgtaat
    22861 ggccgtgcgt ttcgtgtctt ggcggatttg cgcaatttcc gcctgcattt ctttctgatt
    22921 tttcagcgtt tgatcagtct tgttttcaat acgcgccaag gcttccaaaa tcgggtcgct
    22981 catgatttgt ctgctttcct gtccagtttt tcgtttactt tttccaactt gttttcgatg
    23041 cgtcccaacg aagccgcaat attgtcgcgg tctgccttgg catcttgctt ggtgtgataa
    23101 gagagcttga ccgcgtgcag ctcctctttc aggtcgtcga tacgcttgtc cgcctctttc
    23161 agacggcctg aaatgccgtt gacccaaaac caaaatgccg ccgtcgcaat cggccacagg
    23221 gttctgaaac caaattcaaa gtccatttaa aaccccttta aaccggcaca tcgccgaata
    23281 cgatacggac ggcgtaaccg tcagggcgat tgctggcaat ctccagtcca tcaccatcat
    23341 tacaaacaca gtaatacgcc cccaaagttt gccaaaccgc acgtttaaag gtgtcatagt
    23401 tcgtaattgg atattcaagg tgaaacgtcg tctgaaaatc cttatccatg cgtaccgcgt
    23461 actcaatgcc tgccttatcc aacagatcgg aaacatgaat gacaaacggc tcttgctcgc
    23521 gtgcgcggct taagcccaat tccaaatcgg catggcgcac agccaactga cgttcaacta
    23581 attcacggta ggtcattctt tgatacccat taaatatttt gtccgcttgt acaatttctt
    23641 aacccacgaa atatttacaa atgtataaac ctttgctaca acttcgccgt catagtgcgc
    23701 attttctcgt gcagcccgaa atttcgccct ggcttcttca gggttgcccg cccaaatgct
    23761 caatgaccag gacttgccgt taaagcggta agaaaacgtg tactcattca taggagaaac
    23821 cttatgtatt ttgaaatcta taaagacgca aaaggcgaat accgttggcg tttgaaagca
    23881 gccaaccatg aaatcatcgc tcagggcgaa ggctacacca gcaagcaaaa ctgtcagcac
    23941 gcagtcgatt tgctgaaaag cactaccgcc gctacccctg taaaagaggt ataaaatccg
    24001 ctttcaccct cagcccgcgc cctacgcggg cttttttgtc agtttccgac tttgcgggag
    24061 tgattgcccg cccagtcgcg ccaagcctga ttttgatttt ccaactccgc cacatagccg
    24121 ccaaactcgg cggcgtgttc caacagcgtg gccgtcttgc cgtctttcgg cggatttggg
    24181 cgtaccggcg cgaccatcaa tgcggcaggc ggtgtcggca tgaccgcctt ttcgacaacc
    24241 ttaatttccg tagccgaggg cgcgcttgta gagctgcaag ccgtgatggc caaagccgtc
    24301 aatacaaccg ccgcctgcat ttttacggtc ttgagtaagg acattttcga tttccttttt
    24361 attttccgtt ttcagacggc tgacttccgc ctgttttttc gccaaagcca tgccgacggc
    24421 gtgcgccttg acttcatatt ttttcgcttc cgcgcgcgcc tgttccagct cgcgtgcata
    24481 gttttgagcc gacaacagca tggcttgcgc cttgtcgcgc ttcattttct caatgaccac
    24541 ctgctgcttc gcaaacgccg acttatagcc ttgatggtgc gacaccgcca aacccgtgcc
    24601 gacaagcgcg ataatggcaa ttggttgcca gttattcgct agcagtttca cgagattcat
    24661 tctcgacctc ctgacgtttg acgctgacca acgaacgcgc caccgcatag ccgccgacaa
    24721 tgcccaaata caccgcccaa atctccgccg atgggtcggg caacatcaca aatttaaacg
    24781 tccccgccgc gcaggcgacg tttgcccaca gcttcgagtg cgacacattg cctgtcgccg
    24841 ggtttttaaa aatatccaaa atacgcattg ctattccaca cttttggttt gcaggtgccg
    24901 tttcagcatt tcctgataat tggccagttc gccctccgca aattcaaacg ccgccaagtc
    24961 tgcctgttcg cttgcctcac ggcttttggc cgaccacagc ccaatcatct tttcgtaaaa
    25021 cgcaacctgt cccatgatta acgacgattc ttgcgtttgc gcgcagcccg tttcgcggct
    25081 gccacgcctg agtttcttaa atttgggcgt ggataggtgt gtatcggacg aacatttggc
    25141 atctgtataa gtgcgcggtt tacctgctca ttactaggat tttctccaat caattttgta
    25201 agaaaatagg aagcagcttc tttcaattta ccaataatat tcatactctt gccgccccca
    25261 atttcatcgc aatcgcgtcc gcaatcgcgc ggcagatgcc ccatttggtc gtcttaaaca
    25321 aggccaaatc agtgtcgttg ctgatgaaaa aaggctcaac aatgccgcca gcctgcgcat
    25381 aagccaggcg cgaatgatgg cccgcattgt cgggtttaaa gccgtcttcg ccgcgcagtt
    25441 tccagccggt tttcttggca acagctttgc tcaacacctg acaccagcgt ttgtttttaa
    25501 cggtactcaa cgcctcaatg cccgtagctg ctttaccggc cgccgagttg gtatggaact
    25561 caatcgccac atccgagccg cgaatcagtt ttacagcttc acgcagcggc atattgcctt
    25621 tgcctgtgcc gtcggtttta acagtcaaac cgtagtcatc gcgcaaaata gcagccacaa
    25681 tgttgcgcat atcctgcgcc aagtccgcct cacggtcgct gccgttgacc gcacccgggt
    25741 cggtgttgct gtgtccagcg gttaaggtta cggttttgcc cattcatcat ctccaaaaaa
    25801 tattgatt
//
LOCUS       DAWKOX010000008        25636 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.008, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000008 DAWKOX010000000
VERSION     DAWKOX010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25636)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25636)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25636
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.008"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            32..922
                     /locus_tag="WJK78_000241"
     CDS             32..922
                     /locus_tag="WJK78_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEZ7597221.1"
                     /translation="MFGFRLSGGKGILQRSQVALVVTESTGGLEIPAAKAIRRAGIAV
                     IIANPRQTHQFAQSQPLTKTDAKDAKMPAFFTQMMTQKEDWQTMPYQPPTEAEEVLEA
                     LVNRRNQSADMRTAEKNRLHQVHETQVGSVKQLIAHFDRLIDELDKQIDDHTHTHFDG
                     KAQVAEQIKGIGSITTATLMAMLPELGRLSHKRIAGLVGIAPHPRESGETKFKSRCFG
                     GRSAVRKALYMATVAATRFEPLIRDFYQRLPSEGKPYKVAVTACMRKLLTISNARMRD
                     YFAENDTAENDTAENGIRTA"
     gene            970..2043
                     /locus_tag="WJK78_000242"
     CDS             970..2043
                     /locus_tag="WJK78_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ7597222.1"
                     /translation="MRPFFVGAAVLAILGALVFFINPGAIVLHRQIFLELMLPAAYGG
                     FLTAALLDWTGFSGNLKPVATLMAALLLAASAILPFSPQTASFFVAAYWLVLLLFCAR
                     LIWLDRNTDNFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSILL
                     GAEALKECRLKDPVFIPNVVYKNIAITFLLLHAAAELWLPAQTAGFTSLAVGFILLAK
                     LRELHHHELLRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGSV
                     MMVWLTAGLWHSGFTKLDYPKLCRIAVPILFAAAVSRTFLMNVNPIFFITIPAILTAV
                     VFTLYLFTFVPIFRANAFTGDPE"
     gene            complement(2089..4278)
                     /locus_tag="WJK78_000243"
     CDS             complement(2089..4278)
                     /locus_tag="WJK78_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ7597223.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSVRTAFSDEPLLPESWRDLLSFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVGNRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPIILGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRTFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNKIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            4417..5199
                     /locus_tag="WJK78_000244"
     CDS             4417..5199
                     /locus_tag="WJK78_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ7597224.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            complement(5517..7451)
                     /locus_tag="WJK78_000245"
     CDS             complement(5517..7451)
                     /locus_tag="WJK78_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ7597225.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDDIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(7517..8695)
                     /locus_tag="WJK78_000246"
     CDS             complement(7517..8695)
                     /locus_tag="WJK78_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ7597226.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQDALAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            8921..9310
                     /locus_tag="WJK78_000247"
     CDS             8921..9310
                     /locus_tag="WJK78_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ7597227.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVK
                     STLLMNAQNLERYYRQKGTFDNYDQTKLKQNKYFKITLSKVNPDHFTLQAVPDPTTNE
                     GETCIVTLNDGGTLSAAGNGQSCPDFD"
     gene            9594..10640
                     /gene="adhP"
                     /locus_tag="WJK78_000248"
     CDS             9594..10640
                     /gene="adhP"
                     /locus_tag="WJK78_000248"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ7597228.1"
                     /translation="MKMQAVVVNKNVAGDVEVIEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPESLDPAQASSITCAGVTTYKAIKV
                     SGVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDEKLAFAKESGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECSCGHHH"
     gene            complement(10805..14290)
                     /gene="smc"
                     /locus_tag="WJK78_000249"
     CDS             complement(10805..14290)
                     /gene="smc"
                     /locus_tag="WJK78_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ7597229.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQ
                     TTEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQE
                     QQQIRVKLEENESQVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREVFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATGHAAAPQLWQHITAPAEWQHALSVILAERLHARDVPQGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLSPELSSAEAAFKQAE
                     ATVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIAILQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELALAYETEFQNDEQHIKLDELT
                     EAVQTLDEEYIAVQEKLAQIQAQGREQYAKVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNTSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITILEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            14292..14543
                     /locus_tag="WJK78_000250"
     CDS             14292..14543
                     /locus_tag="WJK78_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597230.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            14540..15262
                     /gene="lpxH"
                     /locus_tag="WJK78_000251"
     CDS             14540..15262
                     /gene="lpxH"
                     /locus_tag="WJK78_000251"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ7597231.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            15531..17117
                     /locus_tag="WJK78_000252"
     CDS             15531..17117
                     /locus_tag="WJK78_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ7597232.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(17286..17489)
                     /locus_tag="WJK78_000253"
     CDS             complement(17286..17489)
                     /locus_tag="WJK78_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ7597233.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            17605..18102
                     /locus_tag="WJK78_000254"
     CDS             17605..18102
                     /locus_tag="WJK78_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ7597234.1"
                     /translation="MTALTLPEDIRQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGETIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHILSNWETFA
                     HIGQA"
     gene            18184..19377
                     /locus_tag="WJK78_000255"
     CDS             18184..19377
                     /locus_tag="WJK78_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ7597235.1"
                     /translation="MFFKHIEAALADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PIVKAVKEAEKHLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSRAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAIRAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVALLKAKG
                     ASQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(19781..20716)
                     /gene="hemC"
                     /locus_tag="WJK78_000256"
     CDS             complement(19781..20716)
                     /gene="hemC"
                     /locus_tag="WJK78_000256"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ7597236.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            20835..21350
                     /gene="ybeY"
                     /locus_tag="WJK78_000257"
     CDS             20835..21350
                     /gene="ybeY"
                     /locus_tag="WJK78_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ7597237.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KSGYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            21352..22176
                     /locus_tag="WJK78_000258"
     CDS             21352..22176
                     /locus_tag="WJK78_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ7597238.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVIIGSLQFTVARADNRRLHTLMATRVK"
     gene            complement(22319..23698)
                     /gene="nhaC"
                     /locus_tag="WJK78_000259"
     CDS             complement(22319..23698)
                     /gene="nhaC"
                     /locus_tag="WJK78_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ7597239.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFQADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHCYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(23989..25212)
                     /locus_tag="WJK78_000260"
     CDS             complement(23989..25212)
                     /locus_tag="WJK78_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ7597240.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         5897 a         7293 c         6636 g         5810 t
ORIGIN      
        1 gctgaaaaca gctgaaaaca gctgaaaacc tgtgtttggg tttcggctgt cgggagggaa
       61 aggaattttg caaaggtctc aggtcgcact cgtcgtgacg gaaagtaccg gcggtctcga
      121 aatccccgcc gccaaagcca tccgccgagc aggcatagcc gtgattatcg ccaacccgcg
      181 tcagacgcat cagtttgccc aatcgcagcc gctgaccaaa accgacgcca aagatgccaa
      241 aatgcccgcc ttcttcacac agatgatgac gcagaaagaa gattggcaaa ccatgcccta
      301 ccaaccgccc accgaagcgg aagaagtgtt ggaagccttg gttaaccgcc gcaaccaatc
      361 ggcggatatg cggactgccg agaaaaaccg tctgcatcag gttcatgaaa cgcaagtcgg
      421 aagcgtcaaa caactgattg cccattttga ccggctgatt gacgaattgg acaaacaaat
      481 cgacgaccac acccacacgc attttgacgg caaagcccaa gtggcagaac aaatcaaagg
      541 catcggttcg ataacgacgg ctacgctgat ggcaatgcta cccgaattgg ggcggctgtc
      601 gcacaaacgg atagcgggtt tggtcggcat tgccccgcac ccgagggaga gcggggaaac
      661 caaattcaaa agccgctgct ttggcggaag gtctgcggtg cgtaaggcac tgtatatggc
      721 taccgtggca gcgacacgtt ttgaaccgct tattcgggat ttctaccaac gcctgccgtc
      781 cgagggtaag ccgtataagg ttgccgttac ggcatgtatg cgcaaactgc tgacgatatc
      841 gaatgcccgg atgcgtgatt attttgccga aaacgatacc gccgaaaacg ataccgccga
      901 aaacggtatc cggacggctt gatttgagtt ttggtatttt tgcccgacgg ggtgaaaaat
      961 acagttgcta tgcggccgtt tttcgtcggc gcggcggtgc ttgccatact cggtgcgctg
     1021 gtgtttttca tcaaccccgg tgccatcgtc ctgcaccgcc aaattttctt ggaacttatg
     1081 ctgccggcgg catacggcgg ttttttgact gcggctttgt tggactggac gggtttttcg
     1141 ggtaacctga aacctgtcgc gactttgatg gcggcattat tgctcgccgc atccgctata
     1201 ctgccctttt cgccgcaaac tgcctcgttt ttcgtcgccg cctattggct ggtgttgctg
     1261 ctgttctgcg cccggctgat ttggctagac cgaaacaccg acaacttcgc cctgctaatg
     1321 ttacttgccg cgttcactgt ttttcagacg gcatatgccg tcagcggcga tttgaacctg
     1381 ttgcgcgcgc aagtgcatct aaatatggcg gcggtgatgt tcgtatccgt gcgcgtcagt
     1441 attcttttgg gcgcggaagc cctgaaagaa tgccgtctga aagacccagt attcatcccc
     1501 aatgtcgtct ataaaaacat cgccattacc ttcctgctcc tgcacgccgc cgccgaactt
     1561 tggctgcctg cgcaaaccgc cggttttacc tcgctcgccg tcggctttat cctgcttgcc
     1621 aagctgcgtg agcttcacca tcacgaactc ctgcgcaaac actacgtccg cacttattac
     1681 ctgctccaac tctttgccgc cgcaggctat ttgtggacag gcgcggcgaa attacaaaac
     1741 ctgcccgcct ccgcgcccct gcacctgatt accctcggtg gcatgatggg cagcgtgatg
     1801 atggtgtggc tgaccgccgg actgtggcac agcggcttta ccaaactcga ctaccccaaa
     1861 ctctgccgca ttgccgtccc catcctcttc gccgccgccg tctcgcgcac tttcttgatg
     1921 aacgtgaacc cgatattctt catcaccatc cccgcgattc tgaccgccgt cgtgttcacg
     1981 ctttatcttt tcacgtttgt tccgattttt cgggcgaatg cgtttacggg cgacccggaa
     2041 taaaaatgcc gtctgaaacg gtttcagacg gcatcgtatt gccgataatc aagcctcctg
     2101 cggatcgaca tccaccgacc atctgatttt gccgtcgcgg ttttgctgca acacctgcac
     2161 ccacaaactc acggcacggt gcaaatcctg tcgggatgtc gattcgagga agatttgcgc
     2221 gcgttcgcgt tcggcgaggc gcaccatcag catcggggcc gcgccgaact gggaaacgct
     2281 ttcgggcaac agcggggcga gggtttcttt ggcggcattg agaaattcca tcgcatcggc
     2341 aacgcgcggc gcatcggcgc ggacggcggt ctggaaaccg aagggcggca tggcgaacat
     2401 ttgccgctcg ttcaattcgt tttcggcaaa cacggcatag tcttgcgctt tgacggcggc
     2461 gaagacagga tgttcgggca gttgggtctg tatcaacacc ttgccgggtt tgtcggcgcg
     2521 ccccgccctg cctgacactt gcatcagctc ggcaaacagc ctttccggcg cgcgaaagtc
     2581 cgcgctgtac aggctgccgt cggcgttcaa tacgataacg aggttgagcc gcgcgaaatc
     2641 atggcctttg gcaagcatct gcgtgccgac caaaatgtcg attttgttgt cggcgatgcg
     2701 gcggtacaaa tccgcccagt catttttgtg cgcggtgctg tccctgtcaa cacggacgac
     2761 ggctgccttg ggcaggaagg tgcgcagggt ttcttcgacg cgctgcgtgc cgtggccgac
     2821 ggcggtcagg tcttggttgc cgcagtcggg gcatttgtac gggatgggtt cgcggtggtc
     2881 gcagtggtga cagcgcagtt ggcgggcgcg ttggtgcagt accattttgg cggagcagtt
     2941 tgggcagccg aaggtatggc cgcagtcgcc gcaaaacagc gcgggtgcga agccgcgccg
     3001 gttgaggtac accagcgaca taccgcccgc ttcaaaattc tgtttcaaaa gctgcaaggc
     3061 ttgcggcgag aaaccgttgt cgagtttcag acggcctacg ttgagaatgt ccacttgcgg
     3121 cagttgcgcg gcggtatggg cgcgttcggt cagttgcagc aggcggtacg cgccgctttg
     3181 cgccttgtgc cagctttcca agctgggcgt ggcactgccc aatatgatgg ggcagccgcc
     3241 ctgcttcgcc cgccacaccg ccaaatcgcg ggcgtggtag cgcaattcgt tgtcttgttt
     3301 gaacgagccg tcgtgttcct catcgactac aatcagcccg acatcatcca tcggcgtaaa
     3361 caccgccagc cgcgtgccga tgaccaattt cgcctgcccc aacatcgcgc gcaaataatc
     3421 ctgcgtgcgc ctgcctgccg ccatctgact gtgcaacacg gcggtcggca cgtcggcaaa
     3481 acgatttccc acccgcttca aaagctgcgg cgtgaggttg atttcgggca acagaaacaa
     3541 cacctgccgc ccctgagcca acactttcgc catcgcatcg aaatacactt cggtcttgcc
     3601 gctgccggtg atgccgtaca gcagaaacgg ctggaagcgt cccaatgccg tctgaatggc
     3661 atcggaagcc ttctgctggt cagcatttaa tacaaattca gagtgcgaag cctgcccatt
     3721 acacgacctt aaaacgggct tcgccgcttc cgtcgtttca atccaaccct gctccgccca
     3781 atcttcgatt aacttcgccg cctgcgcgtt tacctgcttc aacgctgcca tcgtcatttc
     3841 gcccgacagc agcgcgtccc acaaagccgc ttttttgttg aaccgcgccg gcggcggcgt
     3901 ttgcgccctg cccgcttcgt tcaacgcgta aaacaagggc ggctgcggca tttccaccgc
     3961 gcgcgtttcc ttcaaacctt gcggcaatgc ggcaaatact gcctgcccgg tcggatagtg
     4021 gtaataacgc gacgtaaacg agagcaaatc acgccagctt tcgggcagca gcggctcgtc
     4081 cgaaaaggcc gtccgaacgc tcaaaatccg cgccgtatcc atatccggcg caatatccgt
     4141 ttcccacacc atcccgacca cggttttatt gcggaaaggc acaagcaccc gcgttcccgg
     4201 aggaagcgga tcggaatggg aataagtcaa aaggccgtct gaaagcggca cgtttacggc
     4261 gatgcggtgg tagatcatac aggcaggcaa atcatttttt tgcgtatttt aacaggcgga
     4321 agctattttc agacgataaa ttgagcctag gcgcaatgca ggcgcaacag agatttgata
     4381 caattccgct tttccaacac gcgcaatcat ctttatatga aaaccaagtt aatcaaaatc
     4441 ttgaccccct ttaccgtcct cccactgctg gcttgcgggc aaacgcccgt ttccaatgcc
     4501 aacgccgaac ccgccgtcaa agccgagtcc gccggcaaat ccgttgccgc ctctttgaaa
     4561 gcgcgtttgg aaaaaaccta ttccgcccaa gatttgaaag tgttgagcgt cagcgaaaca
     4621 ccggtcaaag gcatttacga agtcgtcgtc agcggcaggc agattatcta caccgatgcc
     4681 gaaggcggct atatgttcgt cggcgaactc atcaacatcg acacgcgcaa aaacctgacc
     4741 gaagaacgcg ccgccgattt gaacaaaatc gacttcgcct ccctgccttt ggacaaagcc
     4801 atcaaagaag tgcgcggcaa cggcaagctg aaagtcgccg tcttttccga ccccgattgt
     4861 ccgttctgca aacgcttgga acacgagttt gaaaaaatga ccgacgtgac ggtttacagc
     4921 tttatgatgc ccattgccgg cctgcacccc gatgccgcgc gcaaggcgca aatcttatgg
     4981 tgtcagcccg accgcgccaa agcgtggacg gattggatgc gtaaaggcaa attcccggtc
     5041 ggcggcagca tctgcgacaa tcccgtcgcg gaaaccactt ccttgggcga acaattcggc
     5101 ttcaacggca cgccgaccct cgtcttcccc aacgggcgca gccaaagcgg ctacagcccg
     5161 atgccccaac tggaggaaat catccgcaaa aatcaataat ccatccgcaa aacaaaaggc
     5221 ttggaaaatt ccaagccttt tttgcgggaa atgccgcctg aaaaccaatc cgcactgaaa
     5281 gttatagtgg attaaattta tagtggatta aatttaaacc agtacagcaa gccaacaaac
     5341 acatcctaac ccattgaatg attgaaaata ataaattgaa caatacgaaa cacaccgccg
     5401 tcattcccac gcaagtggga atttggaacg tagaatctaa gaaaccgttt ttgtccaata
     5461 agtttctgct ccaaaatgac cggttctgca gcttcaggcg gcatctttgt ccaacctcaa
     5521 tcctgtgcca atgcgtctat cggattgagt ttggctgctt tattggcagg cataaagccg
     5581 aacgcgatgc cgattccggt cgagcaggcg accgccccga taacggatgc cgccgaaatg
     5641 tccatcggga agtcggttac aaaatgattg aacacgaggc tgacggcggc ggacaaaccc
     5701 acgccgacca aaccgccgat gacgcagatt aacaccgcct caatcaaaaa ctgctgcaaa
     5761 atattgccgc gccgcgcgcc gattgccatc cgtatgccga tttctttggt gcgctcggta
     5821 acggacacca gcatgatgtt catcacgccg atgccgccga ctaccaatga aatcagggcg
     5881 atggaggaaa tcagcagctt catcgtaccg gtggtgcttt cgactatctg cctgatgctg
     5941 tcgctgttgt tcatgaagaa atcttccgtg ccgtgccgcg ctttgagcag atcggtcagc
     6001 cctttttcgg caacctgggt attggcattg tctttgattt tgacggtgat ggagttggtg
     6061 tggctctcgc ctgtgatttg gtgcatcacc gtcgtatagg gcgaccaaag catcagcacg
     6121 tcggaattgc cgaaagcgtt ttcgtctttt ttcatcacgc cgatgacggt caaggggcgt
     6181 ttcctgaaca aaatggtttt acccaacgga tccgagtccg caaagagttt gtctttgaca
     6241 ttttggtcga tgacgacgac ctgcgcgtct tctttcacat cgttttcgtc aaacagccgc
     6301 cccgtttcca gcttcagtcc gcgcacgtcg aaatattgtt cgcccacgcc gtacaaagaa
     6361 gcggtcaggt cggtattgcg gtaagtcagc gtgccgccgc tcgaagtcat gggcgtggcg
     6421 gaagcaacgt agctttgttt ggcgatgatt tttgcgtcgt ctatggtcag ggttttaatc
     6481 ctgccgctgc gcctgtcgcc gaagccgcgc cccgggaaga tgctgatggt gttcgtccct
     6541 atcgaactga tgtcttcaag gatttttttc tgcgaaccgt tgcccaatgc gacgacggaa
     6601 accaccgacg cgatgccgat gatgatgccg agcatcgtca gaagcgaacg cattttgtgc
     6661 gccaatactg cttgcaccga cattctgaag gcttcgacaa actggtcgta ataaaacgac
     6721 cacgaggctt tttcccgaat cctcccgaca ttgcttgcgg ggatttcggg atttttcgag
     6781 gtgtcggaaa tgatttcgcc gtcccggatt tcgatgacgc ggttggcatt ggcggcgatg
     6841 ccggggtcgt gcgtgaccat aatgacagta tgcccggctt cgtgcagctt gtggatgatt
     6901 tccatcacgt ttttgccgct ggcggtatcg agtgcgccgg tcggctcgtc ggcgaagatg
     6961 atttctccgc cgttcatcag ggcgcgggcg atggagacgc gctgctgctg tccgcccgag
     7021 agttcgccgg gcttgttgcc ctctttgctt gccaaaccca aatcctgcaa caacttctcc
     7081 gcacgcgcgg aacgctcttt gccgcccgcg cccatataga cggctggcag cgcgacgttg
     7141 tcccttgcgg tcagcgagct taagaggttg tagcgttgga agatgaaacc gaagcgttcg
     7201 cggcgcaatg ccgccagctc gtcaggctgc attttggcag tttcgatgtc gtcgattcgg
     7261 tacgaaccgg aaccggcggt atccaaacag ccgagtatgt tcatcagcgt ggacttgccc
     7321 gaaccggact gcccgatgat ggcgacaaaa tcgcccttct ctatcgacag gctgatgtct
     7381 ttcaaaatat ggacgcggtt ctcgccgctg ccgaaatagc ggttgatgtt tttacattcg
     7441 atcaagctca taatattccg taaatcaata acaaatgccg tctgaaaccg tttccgtgtt
     7501 cagacggcat attcgtttat cggcgcggcg ggccgcctag ggcgcgttcg ccgctttcct
     7561 gctgctcggc ggcggttatt tcggagatga ccactttgtc cccctctttc aacccgcttt
     7621 ttacttcggt attcatactg tctctcatac cggtccggat ttcgcgttcc gccgccttgc
     7681 cgtccgcacc caacacgcgc acaaacgcct tgccgccgcg atttttcacg gtcagcgacg
     7741 gaataatcag cacatttttc acgccgtcga tttcaaccgt attctgcgtc gtcatccccg
     7801 tggcgagttt gccgtccgga ttcggcacaa acgaacgggc ataatagtag accgcattgg
     7861 aagccgtatc cgtactgctg ttgtaaccgc ccgacgacat cgtggtcagc ccggggtcga
     7921 cgctgtcgag cttcgcctta atcggcgtat ccggttcgga caaaatcgta aacgaaatat
     7981 cctgccccgc cttcaccttg gtaatatcgc cctcggcaat ctgcattttg ttcaacatca
     8041 tatccagatt cgccaattgg acaatcgtcg gcgtagactg cgccgcgttc acagtctgcc
     8101 cctcttccac gagaatcgcc accaccgtgc cgtccatcgt tgcggtaatg cgcgtgtagc
     8161 ccaattccga ctcggcggta ttgatggaaa ttttgctctg tctgattaga gccttcagct
     8221 cggcaacatt ggctttggcg gcggcaagcg catcctgtgc gctttccaaa tcttctttag
     8281 cggtcgcatc atccttccac aacgccgcct gacgcttata tttcttctcc gcgctgccca
     8341 atgcaatctg tgccgacacc agcttcgcct gatacgtttc caacttggat ttttccgtat
     8401 tgagcgtatt ggtctgcgag gtcgaattga tttccgcaat caaatcgccc tttttaacct
     8461 gttgcccgag tttgacataa agtttcttaa tctgccccga tgcctgcgcg ccgaccgata
     8521 ccaggttgga cggcgaaatc tcccctgttg cagaaaccgt ccggctgatg tcgccgcgcc
     8581 tgaccgtttc cgtaatataa gcagcctgcg gctcgggctt cagataagac catccgcccc
     8641 aaaccgctgc cgccgcgacc gccgcaacag ccgcccattt catcattttt gccatgtttt
     8701 caattctctg tatgcgtcaa tcccataaat cggaagcgga ttctaccgca agtccctgcc
     8761 ccatccaagg cggcaaactg ccgacaataa aaataaccat ttgttttaaa tggcttatac
     8821 aatctgcttt cccgaaaatt tcaatccgtt tacatattcc gccatttccg atacggcgtt
     8881 ataatgccgt cgaccgacaa acaaatggaa acacattgct atgaaaaacg ttcaaaaagg
     8941 ctttacgctg ctcgagctga tgattgccgt cgccatcctc ggcatcctga cgctcatcac
     9001 ctacccttcc tataaaacct acatccggcg cgtccgcctg tcggaagtca aatccaccct
     9061 gctgatgaac gcgcaaaact tagagcgtta ctaccgccaa aaagggacgt ttgacaacta
     9121 cgaccaaacc aaactgaaac aaaacaagta tttcaaaatt accttaagca aagtcaaccc
     9181 cgaccacttc acccttcagg ccgtccccga tccgacgacc aacgaaggcg aaacctgcat
     9241 cgtcacgctc aacgacggcg gcacactgtc cgccgccggc aacgggcagt cctgcccgga
     9301 cttcgactaa tcctccgccg aagcccgcaa acccgtaaag atgccgtccg gacacagctt
     9361 cagacggtat ctttacgggt ttgcccatcc ggtttttcaa acttgaaacc tgccgcccct
     9421 catccggcaa ccgccccgat gccgcgcctt tccaagctgt tataatataa catataatct
     9481 atatttttca acaacatacc acttgacctg tgagatgcgg aagcgtatgc ttacccttat
     9541 atcggacaac attccgttta caggtttttt tgccgtaact aaggagcgca atcatgaaaa
     9601 tgcaggcagt tgttgtgaat aaaaatgtag cgggcgatgt ggaagtaatc gaacgcgagg
     9661 ttcgcccgtt ggaatacggc gaggcattgg tcgaagtcga atattgcggc gtgtgccaca
     9721 ccgacctgca cgttgcggca ggcgactacg gcgaaaaacc gggccgcgtg ttgggacacg
     9781 aaggcatcgg tttggttaaa gaagttgccg acggtgtgaa aaatctgaaa gtcggcgacc
     9841 gcgtcagcat cgcctggctg ttccaaagct gcggctcgtg cgaatactgc aataccggcc
     9901 gcgaaaccct gtgccgctct gtattgaacg ctggctatac tgccgacggc ggcatggcga
     9961 cccactgtat cgtgagtgcc gattacgcgg tcaaagtccc agaaagcttg gatcctgcgc
    10021 aagcttcgag cattacttgt gccggtgtaa ccacttataa agccattaaa gtttccggcg
    10081 ttcgtccggg ccaatggatt gcgatttacg gcgcaggcgg tttgggcaac ttgggggtcc
    10141 aatacgcgaa aaaagtattt ggcgcacacg tcgtcgccat cgacatcaac gatgaaaaac
    10201 tggcttttgc caaagaaagc ggcgcagatt tggttgtcaa cgccgccaaa gaagacgctg
    10261 ccaaagtgat tcaggaaaaa accggcggcg cacacgctgc ggtcgtaacc gccgtatctg
    10321 ctgccgcatt caactctgcc gtgaattgcg tccgcgcggg cggacgtgtg gttgccatcg
    10381 ggctgccgcc ggaatcgatg gatttgtcca tcccgcgttt ggttttggac ggcatcgaag
    10441 tggtcggctc tttggtcggc acacgcaaag atttggaaga agccttccaa ttcggcgcgg
    10501 aaggtttggt tgtgccgaaa gtccaactgc gtgctttgga tgaagcaccc gccattttcc
    10561 aagaaatgcg cgaaggcaaa atcaccggcc gtatggtgat cgatatgaaa aaagaatgca
    10621 gctgcggtca tcaccactga tttgacgtgg cgatacacat cgaaatgccg tctgaacgct
    10681 gttcagacgg cattttttat ggatttggat ttgattttaa tccgttctgt ttgaaatgcc
    10741 gtctgaaaac ccgtatcgca acacgtcatt aagaacggca agattcaacc gttctgcaac
    10801 ccgttcaaac ggcttccgcc atttccaacg cttgtttgat gtccacggcg acgacgcgcg
    10861 agacaccttt ttcctgcatg gttacgccga cgagctgctc cgccatttcc atggtcaggc
    10921 ggttgtggga gatgtagagg aactgggttt gcgccgacat ttctttgacc aggttgcaga
    10981 aacgcgaggt gttggcatcg tccagcggag cgtcgacttc gtccaaaagg cagaacggag
    11041 caggattgag gctgaacagg gcgaacacga ggctcatggc ggtgagggct ttttcgccgc
    11101 cggaaaggag gtggatggtg ctgtttttct tgccgggcgg acgcgccata atggacacgc
    11161 cggcggtcag gaggtcgtcg cctatcattt tgagggtggc ttcgccgccg ccgaacaggg
    11221 tcgggaagaa agtttggact ttgccgttga cggcgtcgaa ggtttctttg aaacgcgctt
    11281 tggttttgtc gtcgatttgg gcgatggctt cttccaaaat ggtgatggcg gcctgcacgt
    11341 cttcgctctg gctgcggtag tagccgtcgc gttcgcgcgc ttcttcgagt tcttgcaggg
    11401 cggcgaggtt gaccgcgccg agtgcttcga tttgttgcga aaggctgccg atgctggtgt
    11461 tcaatacttt cggcgattct ttcgccaacg cttcgagcgc gtccaaatcg gcggcgcgtt
    11521 cggtcaggtt ttgatggtag cgtttggcgt tgatcagggc ttcctgctgc tgcaacaggg
    11581 cggtttgggt agcggcctga agctgcggca gcttggtttg cagggtttgc actttagcgt
    11641 attgctccct gccctgcgcc tgaatctgcg cgagtttttc ctgtacggcg atgtactctt
    11701 catccaaagt ttgtacggct tcggtcaact cgtcgagttt tatgtgctgc tcgtcgtttt
    11761 ggaactcggt ttcataggcg agggcaagct cttgctggcg ttcctgccaa tcgagggttt
    11821 gctgttcgag tcgggcgatt tgctgttggt agttttgttt ttgctggttg agcttgtgga
    11881 cggcgacttc ggcaagcccg tattggcggt tggcttccag cagggcaagc tgcgcctgtt
    11941 tcagacgacc ttgctgctct tggcggctgt gtgcggtggt ttgctgctgg tgttcgagtt
    12001 cggcggcggc ttcctgcaaa atggcgatgt cgtctgaaag cccgtcggac gtgtgttgca
    12061 acacggtctg ctcttccgcc aactgcgcca gttcgcgctc gatgtgttcg cggcggattt
    12121 gcccttggtt ggtgcgcgcc agaagttcgg cggcgcgttg ctgcgcttgg ctgtattggc
    12181 gcgtgtgctg ctgttgctgc tgcatcaggt ttttatgttg cacttcggac gagcgcacgg
    12241 ttgcctccgc ctgtttgaac gcggcttcgg cggaggagag ttcgggggag aggttttcca
    12301 gttcggacgc gatgccgtcg aggcgcgctt tttgggcaat caggctttcc tgcgcgggtt
    12361 tggcatagag caggacgctg accttatcga cctgatggcc ttcgggcgtg agccagattt
    12421 gatgtgcgcc caaatcgttt tgatgcgcga gggcgtaact caaatcaggc gcacacaata
    12481 cgccgtcgag ccagtggtgc aatgccgtct gaaacggcgg ctgcgcttgg atttggttca
    12541 gcaatgcctg tacgggcagg gattttttga tgccgccgga gagaccgtct gaaagccacg
    12601 ccgcctgccc ctgcggcaaa ggttcgggcg gtacgaaacc ttgcggcacg tcgcgggcgt
    12661 gcaggcgttc ggcaaggatg acggacaggg cgtgctgcca ctcagcaggc gcggtaatgt
    12721 gttgccacag ttgcggcgcg gcggcgtggc cggttgcctg ccagaaatcg gctgcttcct
    12781 gctgttgcga caggatttgc gacaacgcct gctgctgcgc ctgcaaggtg atatgttgct
    12841 gcttcaggct ttggaagcgg tttgaggccg tctgaaacac ctcgcgggcg gcgtgtaagg
    12901 cttcttcggc ggcgatgatt tgttcttcgt aatgctcttg ccggctttgc aacaaggcag
    12961 cggcctcctg cgcggcggcg gtttccgctt cgtcgggcag gttcagggct tggttctcct
    13021 gtttcagacg gcctttgcgc tcttcgtgct tggcaacggt ttgttcggca tgggcaagct
    13081 gctgctgctt caacgccagt tcgcggcgga tgcggtttgc ctcgtcctgc tgggtttgga
    13141 aggcggcatt gagcgcggtt tgggtttctt ccaattcggg cagacgctct tcgtgttcgg
    13201 caacctgcat cgcccattcc gccagctcgg tttgcttttc ttcgacctgc gactcgtttt
    13261 cttccagctt gacgcggatt tgctgctgct cctgatggat gcgttgcatc tgcgcctgcg
    13321 ctgcctgctt gtcgcgttcg atgcgttggt gcaggttttg ctgatggcgg atttgttctt
    13381 ccaaacgggc aatctgctcg cgcaacacgc cgcgtttgtt gcccagttcg tgtaccgcct
    13441 gctgctgcga ttgttcggtg gtctgcaagg cgtgtacttc gtcgtttaac gcctgaacct
    13501 gcgcggcggt ttcgtcctgc tgcgcctgca aagactgatg ctgcgcggtc gccttgtcgg
    13561 cggcggcaag cgattgctgc cattgggcgt aatcgagcaa atcctgctgt tggttcaact
    13621 gcgcggtcag ggatttgtag cgttcggcgg tttccgcttg tttttccagc ttttccacct
    13681 gacgcgccaa ctcgttctgc aaatcgccca aacgctgcaa atgctcgcgc gtgtctttca
    13741 gacgaccttc cgtctccttg cggcgttcct tatatttgga cacgcccgcc gcctcctcga
    13801 tataggcgcg caactcctcc ggccgagctt cgatgatgcg cgaaatcatc ccctgctcga
    13861 taacggcata accgcgcgcg cccacgcccg tacccagaaa caaatcagta atatcgcggc
    13921 ggcgcacggt ctgattgttg atgaaatatg tcgattcgcc ctgacgcgtc aactgccgct
    13981 tgatgctcac ctcggcatac tgcccccacg ccccctgcaa actgtggtcg ctgttgtcaa
    14041 acaccagctc caccgaagcc ctcggcgcag gacggcgcgt cgccgcaccg ttaaaaatca
    14101 cgtcctgcat actctcgcca cgaagctgct tcgccgaagc ctcgcccaac acccagcgca
    14161 ccgcgtcaat cacattcgac ttgccgcagc cgttgggccc gataaccgcg acaagctgcc
    14221 ccggaacatg aatcgtggtc gggtcggtaa aagatttgaa gccggagagt ttgatgtggg
    14281 tcaggcgcat aatggtcgga aaaaataaaa aagaagcgta ttttaacgga aatcccgccg
    14341 caccacccca tatcttgccg gcaaaacctt accgcatccc gcaccctcga tgccgtctga
    14401 agccttcaga cggcattttt aacgcgcccg aaccccgatt ccgccaacgc ccgatgcttg
    14461 gcgcggcatt tgccgtattg ccccgccgcc gggcgcgtta taatccgcca cgacatccgc
    14521 ccgatttgga aacctgccta tgaaacccgc ctatttcatc tccgacctgc atttgagcga
    14581 aaagcacccc gaactgaccg cgctgttgct gcgtttttta cgttcttccg ccgccgggca
    14641 ggcgcgggcg gtttacattt tgggcgattt gtttgatttt tgggtgggcg atgacgaagt
    14701 ttccgagttg aatacttcgg ttgcgcgtga aatcaggaaa ttgtccgaca aaggcgttgc
    14761 cgtgttcttc gtcaggggca accgcgactt cctgattggt caggattttt gccggcaggc
    14821 aggcatgacg ctgctgccgg attactcggt tttggacttg ttcggctgca aaaccctcat
    14881 ctgccacggc gacactctgt gtacggatga cagggcatac caacgtttcc gcaaaatcgt
    14941 gcatcggaag cggctgcaaa aactgttcct gatgctgccc ctgaagtggc gcacgcgcct
    15001 tgccgccaaa atcaggcgcg tcagcaaaat ggaaaaacag gtcaagcccg ccgatattat
    15061 ggatgtcaat gccgccttta ccgcgcggca ggttcgcgcc tttaacgcgg aaaggctgat
    15121 acacggacac acccaccgcg agcatatcca tcacgaaaac ggctttaccc gcatcgtttt
    15181 gggcgactgg cataacgact atgcttcaat cctccgcgtg gacggggacg gcgcggtatt
    15241 cgtgccgctg gaaaaatgct gaaaatgccg tctgaagcct ttcgggcggc tttttttaca
    15301 cgcccctttc ccacactccc tccgccgcat catcaccatc cttaacccgc attaatgggc
    15361 gttatcgata aaatgcttga ccgattacat aagattacgt aaagtgtgca aacgcataac
    15421 aattggtctt accaatttat cttttaacca aaatatcggg tgtacgggat ttgaacgtct
    15481 ttccaaacct cgacgcgcct tatgatgcaa atgcctaaaa aggattcgtt atggcacttt
    15541 tcctcagcat attccccatc gtcctgctga tttggctgat ggtgaaaaaa aacagtatgc
    15601 cctcctacgt cgcgctgccg attaccgcag tgctgattta cgccatcaaa cttttctact
    15661 tcggcgatgc gggcatgctg ctcaacgcca ccgccgcttc cggcctcgtc aaaacgctca
    15721 cgccgattac cgtgattttc ggcgcgatta tgttcaaccg tatgatggaa accacgggct
    15781 gcattgatgt catccgcaaa tggctggcga ccatcagccc caaccccgta gcgcaactga
    15841 tgattatcgg ctgggctttt gcctttatga ttgaaggcgc atccggcttc ggcacgcctg
    15901 ccgcgattgc cgcgccgatt ctgatgagct tgggcttcaa cccgttgaaa gtggcgattt
    15961 tcactttggt gatgaactcc gtccccgtct ctttcggcgc ggtcggtacg ccgacctggt
    16021 tcggtttcgc accgctgaac ctgagtgccg aagacatcct cgccatcggc aggcagaccg
    16081 gcgtaatgca cttcttcgca ggtttcgtca tccccgtcat cggcttgggc ttcatcgtac
    16141 cttggtctga aatccgcaaa aacttgggct tcgtcgccat tgccgtcttc tcctgcacca
    16201 ttccttatgt cgcattggcg atggtcaacg aagaattccc gtcgctcgtc gccggcgcaa
    16261 tcggcctgat ggtgtccgta ttcgccgcca accaaggctg gggcttgagc aaagaccacg
    16321 ccaaagaccc gaatgccgaa aaagtgccgt tcgcccaagt cgccaaagca ctcgcccctt
    16381 tgggtatgct gatcggcatg ctggtggtta cgcgcatcaa acagctcggc atcaaaggca
    16441 ttttgaccag caaagaagaa tggttcagct tccaactgcc gtttgatttg tccaaaatca
    16501 ccgtcagcga ctccctgacg attaccttcg gcaatatttt cggacaagat gtcagcgcgt
    16561 cttaccaaac gctgtacgtc ccggcttgga ttccgtttgt gctgaccgtt tggatttgca
    16621 tcctgctgta taaaaccaaa ttcaaagatg cctggacgat ttatgccgta accttcaatc
    16681 aaaccaaaaa accgctgctt gccctgatgg gcgcgctgat tatggttcag ctgatgctgg
    16741 tcggcggcga caattcgatg gtgaaaatca tcggtaaaga atttgccgca atggcgggcg
    16801 aacactgggt ttatttctcg ccgtatctgg gcgcgattgg cgcgttcttc tccggttcca
    16861 acaccgtgtc caacctgacc ttcggcccga ttcagcagca aatcgccttg gataccggcc
    16921 tgtccgttac cctgattctg gcgttgcagt ccgtcggcgg cgcgatgggc aatatggtgt
    16981 gcctcaacaa catcatcgcc gtatgtaccg tattggatgt gaaaaattcc gaaggtgcga
    17041 ttatcaagaa aaccgttatc ccgatggcga tttacggcgt gattgccgtc gtcgcggcaa
    17101 tgattttctt cctctaggcg aaacgccacc atccatagcg gcagcacgcg gggaacggaa
    17161 accgccgttc cccgtctggg cggcgcgtcg ggcagaatcc cggtgccgga acaagcccgc
    17221 cccgccaaac aaatgccgtc tgaaaccgga aaaggcttca gacggcattt ttccgccgct
    17281 tgcgttcagg cgtaatgatg atgcggcatc ttgccgtcaa ggcggtagcg cgtgccgcaa
    17341 tacgggcagg caacgctgcc cgattctcct tcgcacaaag gcaaaaacac tctcggatgc
    17401 ccgttccact gctcgttgtc gggtcccgag caatacagcg gcagattttc cggcaacacg
    17461 gaaatttcct gcagattcag attgtccatt tgattttcct ttgcgtggtt ggcgtgcgcc
    17521 cattttacgc catcggcagg ctaaaggata ttttcggcgc aaagccgcaa tccgctataa
    17581 tccccacttt tcagacggca taccatgact gcgcttaccc ttccggaaga catccgccaa
    17641 caagaaccat ccgttctgct ctataccctc gtttccgcct acctcgaaca caccgcccaa
    17701 accggcgacg aatccctctc ctgcctgtcc gacgaccagc acacgctgac cgcattctgc
    17761 tacctcgaca gccaagtcga agaaggcggc ttcgtgcaac tcatcgcctc cggttacggc
    17821 gaatatattt tccgcaaccc gcttgccgac agcctgcgcc gctggaaaat caaagccgtg
    17881 ccgaaagtct tggacaaagc caaagccctc tacgaacaac acggcgaaac catcgaaacg
    17941 ctcgccgacg gaggcgcaga catcgaatcc ctgcgcaaac agttccccga ctttgaagaa
    18001 tgggacggcg catactacga agccgccgaa caagacctgc ccctgcttgc agaacacatc
    18061 ctgtcaaact gggaaacctt cgcccatatc gggcaggcgt gattgcgtct gtttccagcc
    18121 cgtgtaaaac agcgtaaaat cggcaaaccc gaatgacctt ccgtccccat caaggagcaa
    18181 gctatgttct tcaagcacat cgaagccgcc ctcgccgatc cgattctcgg tttgggcgaa
    18241 gcattcaaag ccgaaacccg ccccgaaaaa gtcaacctcg gcatcggcgt ttataaagac
    18301 gcatccggcg cgacacccat tgtcaaagcc gtcaaagaag ccgaaaaaca cctgttggaa
    18361 agtgaaacca ccaaaaacta cctcaccatc gacggcgttg ccgattacaa cgcgcaaacc
    18421 caaatcctgc tgttcggcaa agaccacgaa atcatcgcca gccgccgcgc caaaacagcg
    18481 caaagcctcg gcggtacggg cgcattgcgt attgcggccg agtttgccaa acgccagttg
    18541 aacgcgcaaa ccatctggat ttccaatccg acctggccaa accacaacgc catcgccaag
    18601 gcggtcggta tccaagacaa accttatcgt tattatgatg ccgccaaaca cggtttggat
    18661 tgggacggta tgattgaaga cttgagccgg gcgcaaaaag gcgacatcgt cctgctgcac
    18721 ggctgctgcc acaatcctac cggcatcgac cctacgcccg aacaatggga aactttggca
    18781 aaactttctg ccgaaaaagg ctggttgccg ctgtttgact ttgcctacca aggcttcggc
    18841 aacggtctgg aagaagatgc ctacggcttg cgcgtgttct tgaaacacaa tacagaattg
    18901 ctgattgcca gctcttattc caaaaacttc ggtatgtaca acgagcgcgt cggcgcgttc
    18961 actttggtgg ccgaagacga agaaacagca atccgcgcac acagccaagt caaaaccatc
    19021 atccgtacct tgtattccaa cccggcttca cacggtgcga acaccattgc gctggtgttg
    19081 aaaaatgatg atttgaaagc ccaatggatt gccgaactcg atgaaatgcg cggccgcatc
    19141 aaagccatgc gccaaaaatt tgttgcgttg ctcaaagcca aaggtgcaag ccaagacttt
    19201 gatttcatta tcgaacaaaa cggtatgttc tctttcagcg gtctgactcc cgaacaagtt
    19261 gaccgtttga aaaacgagtt tgccatttat gccgtccgct ccggccgcat caacgtcgcc
    19321 ggcattaccg acgacaacat cgattatctg tgcgaaagca tcgtgaaagt cttgtaaaac
    19381 aaaagcgcat acgaaatgcc gtctgaacct taaccagttc agacggcatc tgttttttgt
    19441 taaaaaacaa taaaccataa caatttcaaa caagctaaaa aacatctata aaatcaaccc
    19501 aatatgatga actcaaataa aaaatacgaa tatcatcatt ctcaaattca aaatttgaac
    19561 gccacagtat tatccgaagc cacaaaaacc tttccgccgt cattcccgcg caggcgggaa
    19621 tccgggaacc caatgctgca agaattgatt agaaacaact gaaaccgagc aaactggatt
    19681 cccgcctgcg cgggaatgac gaaataaggc gagtaaaact gatgaaacaa attgattaaa
    19741 aacaataact tatattattt tatttaaatt ttcgataaaa tcaattttcc gtattcaata
    19801 ctgctccaat caattcccgc gcaccgtcgt ccgccaattt cttagcgaca gcgcgtccga
    19861 gcgcgtcggc atattcggca ggggcttgcg cgtccgcccg caacacaacc gaaccgtcgg
    19921 gatgaccgac caagccgcgc aaggtcagca agccgttttc ttccgtgcaa tatgccgcca
    19981 gcggcacttg gcagcttccg cccaaagcgc gcgccaacgc gcgttcagcc gtaacgcagg
    20041 cgtgtgtggt atcgtggttc aacggcttta agacttcata caaatcttcg cgatgcgctg
    20101 caatttcaat acccaatgca ccttgtccgg cggcaggcag actgtcagat tccgacaaaa
    20161 tcatgcggat gcgttcgtcc aattccagac gctgcaaacc ggcggcggca aggataattg
    20221 cgtcgtattc gccgttatcg agtttggaca aacgggtttg cacattgccg cgcaaaggtt
    20281 tgataaccaa atgcggatag cgcgcacgca actgggcttc gcggcgcagg ctggatgtac
    20341 cgacgacagc gcctttgggc atttcttcca aacgcgcgta ttggttggac acaaacgcgt
    20401 caaacggatt ggcgcgttcg ccgatggcgg caagcgcgaa accttcaggc aaatccatcg
    20461 gcacgtcctt aatcgaatgc accgccaaat cggcgcgccc gtcatataaa gcctgttcca
    20521 actctttgac aaacaagcct ttaccgccga cttttgacaa agttttgtcc aaaatctgat
    20581 cgccgcgcgt ggtcatgccc aaaatctcga cttcgcaatc gggatacaga gccttcagac
    20641 ggccttggat atgctttgcc tgccacatgg caagcaggct ttcgcggctg gcgatgacga
    20701 gttttttcgg gttcatgttc aatgcgttca aagaatggaa acggcgtgaa gtctatcata
    20761 ttttgaacgt ttcttcagac ggcaccgtca ggtctatgtt atatttacac ccacaaaaca
    20821 cgaaacccgc cacaatgaaa cgcaccaaaa aatacccttt cttaacgttg cagcggcaac
    20881 gtttccattt gaactttgaa aacgcctctt ccgccgccgg catcccagcc gaacgcgatt
    20941 tctaccgctg ggcgtggtct gccttgaaaa gcggataccg ccgcgccgac atcagcctga
    21001 ttcttctgga cgaagaagaa gcccgagcct acaaccgcga ctaccgcggc aaagattacg
    21061 ccaccaatgt attgagtttc gcgctcaacg aaggcgaaat cctgccctgc caagtttcgg
    21121 aaaaactgta cggcgatttg attatctgcc cgcaagtggt tttgaaagaa gccgccgaac
    21181 agggcaaaac gcccgaacgg cattttgccc acctgaccat acacggcgtt ttgcacctga
    21241 tgggctacga ccacatcgaa gacgatgaag ccgaaataat ggaagccgaa gaaatccgcc
    21301 tgatgctggc ggcaggcttc cccaacccct accaagagga cgaatattaa aatggacggt
    21361 acgcagtcga aacccaagtt tttcgaacgc ctgatctccc gacttgccgg cgagcccgac
    21421 tccgccgaag acgtattgac cctgctgcgc caagcgcacg agcaggaagt ttttgatgcg
    21481 gatacgcttt taaggttgga aaaagtcctc gatttttccg atttggaagt gcgcgatgcc
    21541 atgattacgc gcagccgtat gaacgtttta aaagaaaacg acagcatcga acgcatcacc
    21601 gcctacgtta tcgataccgc ccattcgcgc ttccccgtca tcggtgaaga caaagacgaa
    21661 gttttgggta ttttgcacgc caaagacctg ctcaaatata tgttcaaccc cgagcagttc
    21721 cacctcaaat cgatattgcg ccctgccgtc ttcgtccccg aaggcaaatc gctgaccgcc
    21781 cttttaaaag agttccgcga acagcgcaac catatggcga tcgtcatcga cgaatacggc
    21841 ggcacgtcgg gtttggtaac ttttgaagac atcatcgagc aaatcgtcgg cgacatcgaa
    21901 gatgagtttg acgaagacga aagcgcggac aacatccacg ccgtttcttc cgaacgctgg
    21961 cgcatccacg cggctaccga aatcgaagac atcaacacct tcttcggtac ggaatacagc
    22021 agcgaagaag ccgacaccat tggcggcctg gtcattcaag agttgggaca tctgcccgtg
    22081 cgcggcgaaa aagtcattat cggcagcctg caatttaccg tcgcacgcgc cgacaaccgc
    22141 cgcctgcata cgctgatggc gacccgcgtg aagtaagcag agcctgcccg caccgccgtt
    22201 tctgcacagt ttaggatgac ggtacggacg ttttctgttt caatcctccc catccgccaa
    22261 acataaaaat gccgtctgaa accggaaaac aggttcagac ggcatttcgc ttatccgctt
    22321 attttttgct caaagtcagc cccgtccagc cgaataacag ggttaaagcc aaactcaaat
    22381 agcagaaaaa ggcatagggc agatattccc agaccggcac acccagcgca tggctgataa
    22441 atacgccgca cacgctccac ggaacaagcg ggttgatgac cgtacccgcg tcttcgagcg
    22501 tacgcgagag gttgcgggaa tgtagtccga gcttatcgta aacgggtttg aacgtttcac
    22561 ccgacaacaa aatactcaaa tattgctcgc cgatcaggaa attaaccccg accgaagtca
    22621 tggcaacgct gaatgtggca cgtccggcat tcgtcaaaaa gctgcggacg gcatccagca
    22681 gggaaggaat cgcgcccagc gcaaacagca gcccgcccaa actcatcccg agaatcacga
    22741 tggtttgcgt gaaaaacata ctttccaagc cgccgcgcga aatgagtttg gcgatgtctt
    22801 taaacgcttc gccttcgagt ttgtagccgc cgtaaaacca cgcgccgagc tgacgcagat
    22861 cgggcgtgct gtgcagatac gttacggcaa cggcggcaat gacggtaaag agcatagcga
    22921 ccacggcatt gacgcgcatc aatgccaaaa cgaccaacag cgcaaacgga atcagcgaat
    22981 agcagtgcac caatcccgtg gcttcaagct ggctgcggaa ggattcgacg ctgttcaaat
    23041 cctgcgcggc gacgctggga agaagccaca gcatcagtgc cgcactgatg agccacgcgg
    23101 gaatggtggt gtacatcata tttttgatgt gttcaaacag gtcgataccg acaatggacg
    23161 cggaaatgcc cgtcgtatcg gaaagcgggg acattttgtc gccaaaaaat gcgcccgaaa
    23221 caatcgcgcc cgccgtcatc gccatatcgg cctgaaacgc cgccgccata cccataaagg
    23281 caacgccgac agtggcgcag gtggtcaggc tgctgccgat ggacacgccg atgacggaac
    23341 acagcgcgaa ggcggaaaaa taaaaataag tcggggaaat cagtccgaaa ccgtaataca
    23401 tcagcgtcgg aatcgcgccg ctcatcatca gcgcgctgac catcagcccg atgaagaaaa
    23461 acaggtaaat cgcgcccata ccctgattca acgcgcctat catgccctgc tgcatatcgt
    23521 tgtatttcaa accgcgcgcc aagccgtaca aaatcagcac gacgatggcg gcaataatgg
    23581 acatatgcgg cagccactcc aatgaaatga tggtatagcc catcgcggca atcagagcga
    23641 cgacgacggc aagtgcctca ccgcgcggca tatcgagtaa ggatttgaaa gcgaacatga
    23701 ttctttgccc gatttgatat aaagttaacg gattctaaca caccataccg aatccgcccg
    23761 acgttttcag acggcatttt agcgttttac aaaagccgga cagaaacaaa acggcaattt
    23821 tctcaattta aattaatttt tttgaaatat aattttttat ttttttgttt gttgacatat
    23881 aagactttta tggattgaag tattaaaacc tcggcacaca cgccgcaaac accggtacgc
    23941 aaaaatgccg tctgaaagat gttcagacga catttctcaa gaaaaagatt atttgtccgc
    24001 cctatatccg tacaccgcaa aaaacacgat atacagataa cagatgacgg aaacgacaaa
    24061 cgaagacatc agggtgtaag tatctgccac ccagccctgc acgacaggaa cgaccgcacc
    24121 gccgacaatc gcggtacaca gtacaccgga agccgcgttg gtaaattttc ccaatccttt
    24181 ggttgccaaa gagaaaatcg tcgggaacat aatcgagttg aaaaaaccga tggcaagcag
    24241 cgaccacatc gccacatccg cattgccgct acccgtcgcc atcgcgacgg caagcagtac
    24301 gaccgcagcc gatgcgttaa acgccaaata acggttgggc gcgaatttcg ccatcaccgc
    24361 cgaaccgagg aaacgtccga ccatcgcgcc gccccaatag aacgacaggt aatgcgcggc
    24421 agaagcatga tccagccctt tcagataacc caatacgttg accatcaacg aaccgataga
    24481 cacctccgcg ccgacatagc agaaaatgcc tgccgtaccg aacacgagat gtttgtattg
    24541 ccatacgctg gttttgccgt cgtggttgtg cgcgctttcc tcggcggcaa ttttgcgcgc
    24601 gtcgggcagc cggatcattt tcacgaaaac ggcaaggata atcagcagcc ccgccagtcc
    24661 caaataggga atctgtacgg aagaaatctg ttccgccttg ctgacggttt gggttgcgtc
    24721 cgccagaatc aggaacgcgc cgatttgcgg cgcaatggtc gtacccaaag cgttaaacgc
    24781 ctgaaccagc gtcagtgttg ccgattcctt gccgggtttc gccagcaggg taacataagg
    24841 attaccggcg acctgaagca gcgttacgcc ggaagccaaa ataaacaacg cgcccaaaaa
    24901 taccgcgtaa gaatggctac ccgcagcagg ataaaacagc aggcatccga ccgccgtcag
    24961 cagaaagccg ccgataacgc cgtttttgta gccgactttg ccgacaaaag cccccatcgg
    25021 gatggacatc accgcatagg cggtaaagaa acagaattgg atcagcatcg cctgaacgta
    25081 agacaggtcg aaaatttctt tcaaatgagg gataaggatg tcgttcatgc aggtaataaa
    25141 acccatcatg aagaacagcg tggtcaagac gaccaatggg gacgtatgat tgttttgtga
    25201 ttgcgcagac atgatttgcc tttcgtggtg tcggaatatt acccgtttca agaaaataga
    25261 aattgacatt tcttaacggc aatgcaaatc atactgatat ttgaacattt tgcaaacttt
    25321 atcggatgca ggcaatgcgc cgatctgaaa ttcaagcagc agaaattaat attttacagt
    25381 tgcttgcata gattttaata gattttaaaa aattccggcg gacttgcaaa aaccgttccc
    25441 aataaaatga aaatccgccg ccgtatccgg aaaattcgga aatgccgcat cgtggcatca
    25501 aaaccggagc ggaaagaatg tcgtatgccc gacaaaaaag gggcatacgg ctgtgccgta
    25561 ttttttgcac cgtcctccgc ccttcggcgg gggcgtgaaa atatagtgga ttaacaaaaa
    25621 tcaggacaag gcgacg
//
LOCUS       DAWKOX010000009        23880 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.009, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000009 DAWKOX010000000
VERSION     DAWKOX010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23880
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.009"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(109..948)
                     /locus_tag="WJK78_000261"
     CDS             complement(109..948)
                     /locus_tag="WJK78_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ7597241.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1233..1308
                     /locus_tag="WJK78_000262"
     tRNA            1233..1308
                     /locus_tag="WJK78_000262"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1266..1268,aa:Arg,seq:ccg)
     gene            complement(1373..2566)
                     /locus_tag="WJK78_000263"
     CDS             complement(1373..2566)
                     /locus_tag="WJK78_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ7597242.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVSRAETARAAAPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEAELVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFAYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2587..3675)
                     /gene="trmA"
                     /locus_tag="WJK78_000264"
     CDS             complement(2587..3675)
                     /gene="trmA"
                     /locus_tag="WJK78_000264"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ7597243.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKAGGASLIRCDRFDAASEAVNCLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKKLGDAWQQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSVSAAQWNIEANRIGNIKIARLSAEEFTEAYTRKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEQTLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTPHIESSVLLKKKIL"
     gene            3818..4918
                     /gene="aroC"
                     /locus_tag="WJK78_000265"
     CDS             3818..4918
                     /gene="aroC"
                     /locus_tag="WJK78_000265"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ7597244.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFGSVVQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIHVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            5010..5414
                     /locus_tag="WJK78_000266"
     CDS             5010..5414
                     /locus_tag="WJK78_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ7597245.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAEAAGSSAAE"
     gene            complement(5488..7473)
                     /gene="parE"
                     /locus_tag="WJK78_000267"
     CDS             complement(5488..7473)
                     /gene="parE"
                     /locus_tag="WJK78_000267"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ7597246.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVHDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDEHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVSNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVATVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDSILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7540..8064)
                     /locus_tag="WJK78_000268"
     CDS             complement(7540..8064)
                     /locus_tag="WJK78_000268"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ7597247.1"
                     /translation="MLDREGYRPNVGIILINNRNEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELSTRFLRGME
                     SYEDFAARQPSDNR"
     gene            8230..9525
                     /gene="serS"
                     /locus_tag="WJK78_000269"
     CDS             8230..9525
                     /gene="serS"
                     /locus_tag="WJK78_000269"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ7597248.1"
                     /translation="MLDIQSLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKT
                     EELQASRNSISKQIGALKGQGRHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     SGIPNLPHESVPAGKDETENVEVRRVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLKHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDESKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGATKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9603..10601)
                     /locus_tag="WJK78_000270"
     CDS             complement(9603..10601)
                     /locus_tag="WJK78_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ7597249.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAHDPFCNPEAEKIGGRYVDLDELYAQSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQIGDCGNAVRADG"
     gene            complement(10726..11802)
                     /gene="prfA"
                     /locus_tag="WJK78_000271"
     CDS             complement(10726..11802)
                     /gene="prfA"
                     /locus_tag="WJK78_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ7597250.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYQLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLP
                     KDADDDKNIFIEVRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PVDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(11906..12676)
                     /locus_tag="WJK78_000272"
     CDS             complement(11906..12676)
                     /locus_tag="WJK78_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ7597251.1"
                     /translation="MNFTDTHCHLADPALRENLPHILTAARKVGVKRFIVPATCPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDFVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANIPGIAKIAAEIRGTCVEEIAKVTERNADALLGR"
     gene            complement(12684..13676)
                     /locus_tag="WJK78_000273"
     CDS             complement(12684..13676)
                     /locus_tag="WJK78_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ7597252.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWSYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TASGFDNPHFGVIAEWDETQGWYNLRIPSQDAAAVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSEGWGAEDVHKELVRLKLV"
     gene            complement(13743..14426)
                     /locus_tag="WJK78_000274"
     CDS             complement(13743..14426)
                     /locus_tag="WJK78_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ7597253.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14615..15949)
                     /gene="glmM"
                     /locus_tag="WJK78_000275"
     CDS             complement(14615..15949)
                     /gene="glmM"
                     /locus_tag="WJK78_000275"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ7597254.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEANYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMENALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIGKGQNWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(16079..16930)
                     /gene="folP"
                     /locus_tag="WJK78_000276"
     CDS             complement(16079..16930)
                     /gene="folP"
                     /locus_tag="WJK78_000276"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ7597255.1"
                     /translation="MARHVWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNARTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLAEVAGWGVPVSLDTRR
                     TVIMEKALALGGIDIINDVAALTDEGAVELLARQTDTGICLMHMRGLPENMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGF
                     PLLIGVSRKRMVGELTGETDAAARVHGSVAAAVAAVARGAQIVRVHDVKATADALKVW
                     EALGINL"
     gene            complement(17070..17963)
                     /locus_tag="WJK78_000277"
     CDS             complement(17070..17963)
                     /locus_tag="WJK78_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEZ7597256.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            18054..20168
                     /locus_tag="WJK78_000278"
     CDS             18054..20168
                     /locus_tag="WJK78_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ7597257.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAIGLHASVYRILTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDRTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTIGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKDHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            complement(20233..21711)
                     /gene="ubiD"
                     /locus_tag="WJK78_000279"
     CDS             complement(20233..21711)
                     /gene="ubiD"
                     /locus_tag="WJK78_000279"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ7597258.1"
                     /translation="MKYKDLRDFIVMLEQQGKLKRVAHPVSPHLEMTEIADRVLRAEG
                     SALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTSYP
                     VSVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVDNTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWGELGL"
     gene            complement(21731..22246)
                     /locus_tag="WJK78_000280"
     CDS             complement(21731..22246)
                     /locus_tag="WJK78_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ7597259.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENAVYF
                     GMICNRLPSYESDTFGLHCNVVTQPDGQRPLLQLHQSGGHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22253..22753)
                     /locus_tag="WJK78_000281"
     CDS             complement(22253..22753)
                     /locus_tag="WJK78_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597260.1"
                     /translation="MVFVNPLYYGREAGWFVWLAAAMCGLWLLRALTAKLPQQRYAAL
                     FITLFFAAVLVFGRHDSMYWYPVLVNLMMLAVFGGSLFAGQTVIERLARLQQPDLPEK
                     AVRYTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYR
                     KLVLKV"
     gene            complement(22985..23554)
                     /locus_tag="WJK78_000282"
                     /pseudo
     CDS             complement(22985..23554)
                     /locus_tag="WJK78_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            23601..>23880
                     /locus_tag="WJK78_000283"
     CDS             23601..>23880
                     /locus_tag="WJK78_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7597261.1"
                     /translation="MKITHCKLKKKVQKELLHFFVLEVTARSAADILGIHPNSAALFY
                     RKIRTVINHHLVLAADEVFEDPVEPDESDFGGRRKGRRGRGAAGKVVVF"
BASE COUNT         5388 a         6806 c         6256 g         5430 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aattcactat aaattcccat aaaaaaacgg
       61 agcagatacc tgccccgttt ttatttaatc cgaaatttta atctaaattt agaattttgc
      121 accggattgg tttgccatat agtcaacagc cgctttgact tcgtcatcgc tcaaacctgc
      181 attgccgcct ttggcaggca tcgcgttaaa gccttcaagg gcgtgtttgt gcaaggtttc
      241 tttgcctttt ttgatacgcg gtgcccaatc gtcttttttg cctatgccgg gaataccggg
      301 aatcgaaccg ccgtggcaca cctgacaggt tgcttcgaag acttttttac cgtcaacgcc
      361 gaccgcaggg gctgccgcac ccttgtcttc tgccttcgct tctgccggag ctgcactatc
      421 ggcaggagca gaagctgttc ctgaagcggc attgtcggca ggcgcagcct catcaggatt
      481 cgggaaagaa ccgccgcttt tgttcgccat gtaagtaatc gcccgtttaa gttcctgatc
      541 ggtcaggtct gccgcaccgc cttttgcagg catggcgtta aagccgttca gcgcgtgttg
      601 gaacaaggta tcgaagcctt gcgcgatacg cggtgcccaa tcgccgttgt gttccagttt
      661 cggagcgttc ggcacattgc tgtccgccgc gtggcattgg atacagattt tgccgaaaat
      721 ctgttcgcct tggcgttcgc cgacggggat gccgtcgccc atcgtcaatt gtccgacagg
      781 ctggatacgg gtctgcgttg ctgcttccgt agtggcatcg acatcgccga acgagccgct
      841 gcccgccagc ttaatcagga aataaaggac tgcaataaca ataacgatac cgctcacaag
      901 ggtaaacagt gcagagcctt gggctttgtt gtcgcggagt tgtttcattt ggtaggcctc
      961 gccgtcaggt taggttgtgc tgtaaattat agtttggtgt gttaaacgca gttaacaata
     1021 ttttgctgga ttatactgaa ttcacagggt ctttccaatc gctatcattg aaaatatgaa
     1081 aaaatttgcc aacggtatct gtataaaaca aataatcctt tgaaaataat tgtttatcct
     1141 caagaaaact ctccttatgc cgccatacgc cgcctgccgg cgcaagataa cctttgccaa
     1201 tttgcagaat ttacgttaac cttacgtttt acgcacccat agctcagttg gaagagtgtc
     1261 agtttccgaa gctggaggtc acaggttcga tccctgttgg gtgcgccaat tataaagaga
     1321 ccgtctgaaa gataaatatt tttcagacgg tcttttgact tacttcaaac tcttatttca
     1381 agacttccgc aaatgcgcgg gcaacatagt cggtattcga cgtattcagt ccggcgacgc
     1441 acatcctgcc ggaatccagc aggtaaacgg caaattcgtc gcgcagcctg cggacttgtt
     1501 ccacgctcaa tcctgtgtag ccgaacatgc cgcgctgttt gatgaaataa gcgaaatcgc
     1561 gatcggggat ttgcgcagtt aagacatcat aaagtttctg ccgcatcgca cggatgcggt
     1621 cgcgcatcat ataaacctcg ttttgccaca aggcgtaaag ttcggggctg ttcatcacgt
     1681 cggcggcgat atacgcgccg tgcgcgggcg ggctggagta gatacggcgg acagtgaatt
     1741 tgagctgtcc gaataccaat tccgcttctt ccttattcgg gcaaaccacg ctcaggccgc
     1801 cgacgcgctc gccgtagagc gacaggtttt tcgagaagga attgctgacg aacagcggca
     1861 attccatttc caccgctttg cggacggcgt aggcatcgct gtccaaatcg ccgccgaatc
     1921 cttggtaggc aatgtccata aacggaatca gtttgcgcgt tttgatgatg tgcaacactt
     1981 cgtcccattg ttgttccgac atatccacgc cggtcgggtt gtggcagcag ggatggagga
     2041 tcaggacgct gttttcgggc agggtgttga aaaacgcggt catttcgtcg aatttcacgc
     2101 cgacagtggc agggtcgtaa tatgggtaag tgccaacctc gaaacctgca ccttcaaaaa
     2161 tgccgcgatg gttgtcccaa gtcgggtcgc tgacgtaggc gcgcgcttca ggaaaccagc
     2221 ggtgcaggaa atctgctccg actttgagcg cgcccgagcc gcccaaggtt tgcacggtag
     2281 cgatgcgtcc ttgcgcgagc gcagggttgt ctttgccgaa caataaatgc tgcaccgcgc
     2341 tgcggtaagt gtccaagcct tccatcggca ggtagggcga cggcgcaggc gcggcggcgc
     2401 gggcggtttc ggctcggctc acggattcca acacgggcat tttgccttcg tcgtcgaaat
     2461 aaatgcctat gctcaaattg actttttcag ggcgcgggtc gtttttgaag gtttcgacca
     2521 aactcaaaat cggatcgccg ggatagtatt cgatgtgtcg gtacatagtt cttacctctt
     2581 gatttttcaa agtattttct ttttcaacag tacgctgctt tcaatatgcg gcgtaaacgg
     2641 aaattggtcg aacagggcgg cacgttcgac cgcatgggtt tccaccaagg tgtccaaatt
     2701 agcacgcagc gtttcgggat tgcaggaaat gtagatgatg ttgtcaaact gcgacaccag
     2761 cttcaaagtt tgctcatcga tgccggcacg cggcggatcg acgaaaatag tggaaaatgc
     2821 gtaatccgtc aaagcaatac cgccatcctt aaggcgttta aactcacgtt ttctggtata
     2881 ggcttcggta aattcttcag cagacagacg ggcgatttta atgttgccga tgcggttggc
     2941 ttcgatattc cattgcgccg cgctgacgga ggttttggag atttcggttg ccaaaacacg
     3001 ttcaaacttt tcagataaag gaagcgtaaa gttgccgttt ccgcaataca gttcgagcaa
     3061 atccccatcc aatccttctg ctgcaccgca ggcccattca agcattttct gacacacggc
     3121 ggcattcggt tgggtaaaac tgccttcaat ttgccgataa cggaaatccc ggttgccgac
     3181 cttcaaagtt tccgttacat agtcctgttt taagactatt ttctgtcccc tgctccgccc
     3241 aataacggaa atatccaact gttgctgtaa cgcttgcgcc gcctgttgcc atgcgtcgcc
     3301 gagttttttg tggtaaatca tggtaaccag catttccccg ctgagcgtgg acagaaattc
     3361 gacggcatac caacggtttc tcagttcggc agattgggcg gcaacggcaa tcaattcagg
     3421 catcaggcaa ttgactgcct ctgaagcagc atcgaagcgg tcgcaacgga tcaggcttgc
     3481 cccgccagcc ttctgccctt tttcaaacat ggcgtaaaac atttcaccgc cttcgtgcca
     3541 aatacggaac tcggcacgca tacggtaatg tttgtccgga gattcataca cttcccactc
     3601 aggaacatcc aaacctgcaa aaagggtttt aaggtggtct tttttatctt gaagctgctg
     3661 cgtgtagtcg ctcatatcgc tatcctgaaa aatcagaccg gattataagc cgattcactg
     3721 caaaacacgc aaccccttta ccggcatata acccgttttc ctccaacttt tatgctaaaa
     3781 tccgccgtct ccaacatacc gccgacagaa ggaaaatatg gcaggcaaca ctttcggaca
     3841 actcttcacc gtgaccacgt tcggcgaaag ccacggcgca ggtttgggct gcatcatcga
     3901 cggctgcccg cccggcttgg aattaagcga agcggatatc caatttgacc tcgaccggcg
     3961 caaacccggc accagccgcc acgttaccca acgccgcgaa gccgaccaag tcgaaatcct
     4021 ctccggcgta ttcgaaggca aaaccaccgg cacacccatc gccctcttaa tccgcaatac
     4081 cgaccagcgc agcaaagact atggcaacat cgccaccagc ttccgccccg gccacgccga
     4141 ctatacctat tggcacaaat acggcacgcg cgactaccgg ggcggcggca ggagttccgc
     4201 ccgcgaaacc gccgcccgcg ttgctgccgg agccgttgcc aaaaaatggt tgaaagaaaa
     4261 attcggcacg gaaatcaccg cctacgtgac ccaagtcggc gaaaaagaaa tccggtttga
     4321 aggctgcgaa cacatttccc aaaatccttt ttttgccgcc aaccatagcc aaattgccga
     4381 gctggaaaac tatatggaca gcgtgcgcaa atccttggat tccgtcggcg cgaagctgca
     4441 tatcgaagcc gccaacgtcc ctgtcggctt gggcgaacct gtttttgacc gcctcgatgc
     4501 cgaaatcgcc tacgcgatga tgggcatcaa cgccgtcaaa ggcgtggaaa tcggcgcagg
     4561 ttttggcagc gttgtccaac gcggcagcga acacggcgac gaactgaccc cgcaaggctt
     4621 cctgtccaac cactcaggcg gcatcctcgg cggcatcagc accggacaag acatccacgt
     4681 caatatcgcc atcaaaccca ccagctccat cgccaccccg cgccgcagta tcgacatcaa
     4741 cggcaacccc atcgaactcg ccacgcacgg caggcacgac ccctgcgtcg gcttgcgcgc
     4801 cgcgccgatt gcagaagcta tgctggcatt ggttttaatc gaccacgccc tgcgccatcg
     4861 cgcgcaaaat gcggatgttc aggttaatac gcccgacatt accctttcaa acaaataaaa
     4921 atttagccaa aacacagact ttataataga ataccgagca ttgccgtgcc gctttgacgc
     4981 acgggtttgt ttagaggaat acaaccgaaa tgacacaaga aaccgctttg ggcgcggcac
     5041 tgaaatccgc cgtccaaact atgagcaaaa agaaacagac cgaaatgatc gccgaccaca
     5101 tctacggcaa atacgatgta ttcaaacgct tcaaaccgtt ggcgctcggc attgatcagg
     5161 atttgattgc cgctttgccg caatacgatt ccgcactgat tgcacgcgtc ctcgccaacc
     5221 actgccgccg tccgcgttat ctgaaagcct tggcgcgcgg cggcaaacgt ttcgatttga
     5281 acaaccgttt caaaggcgaa gttacccccg aagaacaggc gatcgcgcaa aaccatcctt
     5341 tcgtgcagca ggctttgcaa cagcagtccg cccaagctgc cgccgaagca gccggatctt
     5401 ccgcagcaga ataaatcccc aaacgaaatg ccgtctgaaa accgatttgg tttcagacgg
     5461 cattttttcg tatgcggcaa tcacggttca aatatccaat tccgccgtat cgccttcgcg
     5521 ttccatccaa gcgcggcggg cggcggcttc gcctttgccc atcagtttga cgaagatgtc
     5581 gcgcgtctcg tcatctgcac cttctgggat ttgtacctgc aacaggcggc gggtgtcagg
     5641 gtgcatggtg gtgtctttga gctggtcggg gttcatttcg cccaagccct tgaaacggct
     5701 gatggaatag gcggtttctt tgacgccttc tttttgcagc cgctccaaaa tgctgtcgag
     5761 ttcgttttgg tcgagggcgt agaatttgcg ggcaggtttg cttttgcctt gtgcgttgac
     5821 atcgacgcgg aacagcggcg gctgggcgac gtagatgtgt ccgtcggcaa ccagtttcgg
     5881 gaagtggcgg tagaataagg tcagcagcaa aacttgaata tgcgagccgt ccacgtcggc
     5941 atcggacagg atggcgattt tgccgtagcg caggccgctt aaatcgggat ggtcgttaat
     6001 accgtgcgga tcgacgccga tggcgacgga aatgtcgtgg atttcggcgt tgccgaagag
     6061 ttggtcgggg tggacttcaa agctgttgag cactttgccg cgcaggggca ggatggcttg
     6121 ggtggctttg tcgcgggcga gtttggctga gccgccggcg gaatcgcctt cgacgaggaa
     6181 gagttcgttt tcgcggatgt cttcgctttc gcagtcggtc agcttaccgg gcaggacggc
     6241 gacgccgctg ccttttttct tttcaatctt tttaaccgaa cgcatccgcg cctgtgcctg
     6301 acggatggcg agttcggcga tttttttgcc gaagtccacg ttttggttca gccacagttc
     6361 caaagggtcg cccgatacgg tagcaacgag tttcagcgcg tcgcggttgg tcagtttgtc
     6421 tttggtctga ccttggaact gcgggtcgag gacacgggca gagaggacaa aggcagtttt
     6481 gccgaacacg tcgtcgcttt gcactttcac gccgcgcggt aagaggttgt gcaggttgat
     6541 gaagttgctg acggcgttga acacggcttg tttcaagccc gcttcgtgcg tgccgcccag
     6601 cggggtgggg atgaggttga catagctttc gttggcacac gagccttctt ccagccaagt
     6661 cagggcaaag gcggcgcctt cgccgatgct gaaatcgccg ttgtgttcgt ctgaaatgta
     6721 gttttcgcaa gagaacagcg gtacggcttc ctgcgcgtcg gcaatcaggt cggtcagata
     6781 gcttttcagg ccgtcggggt aatgccaggt ttgggtgtgc gcttcgtctt cgcctttgac
     6841 cggacgggtc agggaaacgc gcacacccgg cagcagcacg gctttggcac gcagcaggcg
     6901 ttcgagttcg ggaatgctgt aattcgggct ttcaaaatat tttccgtccg gccacacgcg
     6961 cacttcggtg ccgctgtctt tgacggcgca tttgcccact tgtgccaacg gttcgaccac
     7021 gtcgccgccg gcaaacacga tgcggtggat tttgccttcg cgtttgaccg ttacttcaag
     7081 gcgggtggaa agggcgttgg tgacggatac gcccacgccg tgcaggccgc ctgaaaaggc
     7141 atacgcgctg ccgccgtctt ttttgttgaa cttgccgccc gcgtgcagac gggtaaacac
     7201 gagttcgacc acgggtacgc cttcttcagg gtgcagaccg acgggaatgc cgcgcccatt
     7261 gtcgtgcacg gaaagcgaac cgtcttcatg aatttgcacg tcgattgcag tcgcgaaacc
     7321 gcccaacgcc tcgtccgccg cgttgtcgat gacttcttgg cagatgtgtg tcgggctgtc
     7381 ggtgcgggtg tacataccgg gacgttcttt gaccggctcc aagcctttga gaacggtgat
     7441 gctggattcg ctgtattggt tgtttttagc cataggaata atctgaaagt aagaaaaaca
     7501 acgctttcag acggcctgaa agcgttgcgt tccgttgttt tagcggttgt cggaaggttg
     7561 gcgggcggca aagtcttcat aactttccat accgcgcagg aagcgggtgg agagttcttt
     7621 caatgccccc aagtaaacgt cgcgtttgaa atcaatcact tcgtcaacgg gcgcccaata
     7681 ttgatgccaa cgccagccgt caaattcggg gtggcgggtg gcgcgcaggt tgacatcgca
     7741 atcccggccg gtcaggcgca ggagatacca aatctgcttc tgtccgcgat aagagccgcg
     7801 ccattcgcgg cgcacccagt tgttcggcac gtcgtaacgc agccagtcgc gcgtccgccc
     7861 gacgattttg acgtgttgcg gcagaagtcc gacttcctcg tataactcgc ggtacatcgc
     7921 ggtttcgggg ctttcgcccg gcttaatgcc gccttgcgga aactgccagg aatgttcgcg
     7981 cacgcgcttg ccccaaaaga cttcgtttcg gttgttgatt aagatgatac cgacattggg
     8041 gcgatagcct tccctgtcca acacggtgtc gccctccgtt aagttcaatc gtgcgatttt
     8101 cccacaaatc gggcgtgttt gccaaatcgg gcggcacggc ggcacgcgtg tcaaaaccgg
     8161 gaaggactca ggaaaatatc ttgaatttgg tttacaataa tgtatttcaa attattcggg
     8221 aatcagaaaa tgttagacat ccaatcgctc cgcagcaaca ccgcagccgt tgccgaacgc
     8281 ttggcggcgc gcggttacga gtttgatgcc gcgcgtttca atgcgctgga agagcagcga
     8341 aaagccgtcc aggtgaaaac cgaagagctg caagcctcgc gcaacagcat ttccaagcaa
     8401 atcggcgcac tgaaaggtca gggcagacac gaagaggcgc aggcggccat ggatcaggtc
     8461 gcccaaatca aaaccgattt ggaacaggct gctgccgatt tggatgccgt tcaaaaagaa
     8521 ttggacgcgt ggttgtcggg cattcccaac ctgccgcacg aaagcgtgcc cgccggcaaa
     8581 gacgaaaccg aaaacgtcga agtccgcaga gtcggcacgc cgcgcgaatt tgactttgaa
     8641 atcaaagacc atgtcgattt gggcgaacct ttgggtttgg attttgaagg cggcgcgaaa
     8701 ctctccggcg cgcgctttac cgtgatgcgc ggacaaatcg cccgcctgca ccgtgcgctg
     8761 gcgcaattca tgctcgatac gcacacgctg aaacacggct acaccgagca ttacacaccc
     8821 tatatcgtgg acgacaccac cttgcaaggc acgggtcagc tgccgaagtt tgcagaagat
     8881 ttgttccacg ttacccgtgg cggcgacgag agcaaaacca cgcaatatct gattccgaca
     8941 gctgaagtta ccctgaccaa taccgttgcc ggcagcatta tcccgtccga acaactgccg
     9001 ctgaagctga ccgcgcattc gccctgtttc cgcagcgagg cgggttcgta cggcaaagac
     9061 acgcgcggtc tgattcgcca gcaccagttc gacaaagtgg aaatggttca aatcgttcat
     9121 cccgaaaaat catacgaaac gctggaagaa atggtcggcc atgccgaaaa catcctgaag
     9181 gctttggaac tgccctaccg cgtgattacc ctgtgtaccg gcgacatggg cttcggcgca
     9241 accaaaacgt atgatttgga agtttgggtg ccggcgcaaa atacctaccg cgaaatctca
     9301 agctgctcca actgcgaaga tttccaagcc cgccgcatga aggcgcgttt caaagacgaa
     9361 aacggcaaaa accgcttggt acatactttg aacggctccg gcttggctgt cggcagaacg
     9421 ctggtcgccg tattggaaaa ccatcaaaac gccgacggca gcatcaacat ccctgccgca
     9481 ctgcaaccgt atatgggcgg cgttgccaag ttggaagtga aataagtttg caagctgcct
     9541 gaacgtcaaa tgccgtctga aacctggttc agacagcatt tcctttaaac ttttaaaaca
     9601 cgtcagccgt cggcacgaac cgcattgccg caatcgccga tctgtccgac ctcgcggata
     9661 ttggacagcg taacttccga aatattaccc aacgcctctt ccgtcaaaaa cgcctgatga
     9721 ccggtaaaca gcacgttatg gcaggacgac aaccggcgga acacgtcgtc ggtaatcaca
     9781 tcgttggatt tgtcttcaaa aaacagctcg cgctcgttct cgtacacatc catgcccaat
     9841 gcgccgattt tccggcgttt caacgcctca atcgcggcgg cactgtcaat cagcccgccc
     9901 cggctggtgt tgataatcat cacgccgtct ttcattttgt cgaacgccgc ttcgttcagc
     9961 atatagtggt tttccggcgt ggcggggcaa tgcagcgtga tgatgtccga ctgggcatac
    10021 agctcgtcca aatccacata cctgccgccg attttttccg cttcggggtt gcaaaacgga
    10081 tcgtgagcca gcaggttcat gccgaaaccc tttaaaatcc gcatggttgc aataccgatt
    10141 ttccccgtgc cgataacgcc cgccgttttg ccgtacatat tgaaaccggt cagaccttcc
    10201 agcgaaaaat tcgcatcgcg ggtacgctga taggctttgt ggatacggcg gttcaaagtc
    10261 agcatcagac cgaccgtatg ttccgcaacc gattcgggcg aataggcagg cacgcgcacg
    10321 actttcaagc ccaactcttc agccgccttt aaatccacat tattgaagcc ggcacaacgc
    10381 aacgccacag ttttcacgcc aatttgcgcc aatttttcca acacgggccg gctgccgtcg
    10441 tcgtttacaa aaatacaaac cgcttccgcg ccttccgcca ttttcgccgt tttcgcatcc
    10501 agcataaaat caaaaaactc cagctcgaag ccgaaatgcc ggttggcgcg ggtaaaatgt
    10561 tcgcggtcat agcttttcgt accgtaaatc gcaatcttca tcaatatgtc cagttgtcgt
    10621 ctatggttga gaaacggcat aatacactga attcaaacaa atcagtagaa tatggtggat
    10681 taaaattgat tgcatgcacg gcatttccat ttcaaaacac aaaactcaat cgcccattgc
    10741 cgccaaaagc tccgcctgat gttcggcaat cagggcatcg gtgatttctg ccaaatcgcc
    10801 gtccatcaca aaatccagct tgtgcagggt gaggttgatg cggtggtctg ttaccctgcc
    10861 ttggggatag ttgtaggtgc ggatgcgttc gctgcggtcg ccgctgccga tgagggattt
    10921 gcgttcggcg gcttctttgg cttgggcttc gcgtttttgc gcgtcgttca ggcgggcggc
    10981 gagaactttc attgcctgcg ctttgttggc gtgttggctg cggccgtctt ggcattcgac
    11041 caccatgccg gtgggcaggt gggtaatgcg gacggcggaa tcggttttgt tgatgtgctg
    11101 accgcctgcg ccggatgcgc ggaaggtgtc gatgcgaagg tcgacggggt tcaactcgat
    11161 gtcttccagt tcgtccgctt cgggcatgac ggcaacggtg caggcggagg tgtggatgcg
    11221 gccttggctt tcggtggcgg ggacgcgctg cacgcggtgt ccgcccgatt caaatttcaa
    11281 acggctgtac gcgcctaagc cgataatacg ggcgataact tctttatagc cgcccaactc
    11341 gctttcgttg gcggacacga tttcaacctg ccagcggttg cgttcggcgt agcggctgta
    11401 catacgcagc aaatcgccag caaacagcgc ggcttcgtcg ccgcccgttc cggcgcgtac
    11461 ttcgataaag atgtttttgt cgtcgtcggc atctttgggc agcagcagtt tttgcaattc
    11521 ggtatcgagt gcgccgattt tggctttcgc cgcttcgatt tcttcggcgg caaagtcttt
    11581 catttcgggg tcggacaaca tttcttcggc atccgccaaa tcgctttgcg ccagttgata
    11641 gttttggaat acttcgacga cgggggtcag ttcagcgtgt tcgcgcgtga gcttgcggta
    11701 gttgtccata tcggatgtgg cttcgggttg ccctaaaagg tgggtaactt cttccaaccg
    11761 gtcgccgagt tgttgcagtt tttctaagat agacggcttc ataattcttc cataacaaac
    11821 gccgcctgaa tttcagacgg catcaacact gaattattat aataggtttt ccggacattc
    11881 aaaaagataa tctcagatgg ataacctacc gtcccaacag ggcatcggca ttgcgctccg
    11941 ttaccttggc aatctcttcc acacaggttc cgcggatttc cgcagcaatc tttgcaatac
    12001 ccggaatatt ggcaggcgta ttaatctctt ttttcagcat aaacgggctg tcggtttcca
    12061 atacgaaatc cccgtcgttc aaggctttaa gcgtatcgcg cactttacgc gcgttcggat
    12121 tgagcaacaa cgaaccgatg ccgattttga aacccagttt cgtcaacacg cgcgcttctt
    12181 ccgcgctgcc tgagaaggcg tgaacgatgc cgccttgggc aaagcctgtc tgtttgacgg
    12241 cggcggcgat gtcggcggtg gctttgagat tatggataat cacgcggcgg cgcagggttt
    12301 gcgcgatggc aagctggcgg acgaaaactt ggatttgccg ttcgcgctgc ggcggcgttt
    12361 gggttttgtc gtaaaaatcc aaaccgattt cgccgaccca tgcctgcgga taacgtgcca
    12421 acatcgcttc caggcggacg aaatcacgct cggcaatgcc gtctgaaaac caaggatgga
    12481 tgccgagcgc aatacggatt tgaccgtgtt cggacggcat ttccgacagt tccgccacgc
    12541 tttgccaatc ctgcggacag gtggcgggaa cgataaaccg cttcacccca actttccgcg
    12601 cggcggtcaa aatgtgcggc aggttttcgc gtaaggcggg atcggcgagg tggcagtggg
    12661 tgtcggtgaa gttcattccg gtttcacact aactttagtc ttactaattc tttgtgaaca
    12721 tcttccgcgc cccatccttc ggaaacggca agcgtcatca atgcggttgc tgtttccaaa
    12781 ttgcatttgc cgccgttgat gatgcctgag ttgcggaacg cgttgccttg cgcgtaaacg
    12841 gcagcggttc tgccttgtcg gacttggctg atgttgagca gcagtttgcc ttgctgcgta
    12901 aagtcttgca cggcgcggat gaaaccttcg tctgcgggcg tgttgccgtg tccgtaactt
    12961 tgcaggataa gggcgtgggc gggaagctgt ccgagtccgt cggcaagttc ttggacggca
    13021 aagccgggaa taagcgtgcg gacggcgatt tttgcctgcg ggtcaggata gcggattttg
    13081 aggccgtctg aaacggccgc cgcatcttgg gacggaatac gaagattgta ccagccttga
    13141 gtttcatccc attcggcgat gacaccgaaa tgcggattat cgaagcctga ggcggtttcg
    13201 gtgctgactt tgctgctgcc gacggcggga taaagtttgc cgtcaaaggc aataagcgtc
    13261 tgcttcaatc cgagtgggaa tgcggcaacg gcagtcgcca gattgcgcgg cgcgtcgctg
    13321 cccacggcgt tgtacgacca ttgggaaccg gtcaggacga tcggcttgtc caaaccctgc
    13381 agcgcgaggg cgaacagatt ggcggtatag gcgagcgtgt ccgtaccgtg cagcaccaaa
    13441 acgccgtcgt actgcggcag cgcggcggca atgatgtcca gccaagcgca ccagttttgc
    13501 agttggacgg cggaagaatc aatcagcgtc ccacaaacgt gccaatcgaa atccatgccg
    13561 tttgaaaacg gcgcgagtgc ctgcccgacc agcgcggtat cggggcgcag gccttcgctg
    13621 ctttgcgtca tgccgatggt gccgccggta taaaggacaa aaattttctg tttcatggct
    13681 catcctgaaa atgcaaagac cgcctgaaac gcgaaatgcg tccggacggt cgaaaatctg
    13741 atttactgct gcttctgtgc cgcttttttc gctgcctttt ccgccttgcg tttggcgcgt
    13801 ttttcgctca attgtgcgcg gtaaagctga taatgtcggc gtttgcgcca ccagaaccac
    13861 gccagcgccg ccgccagcac gcccaatgcg atgaagatgc cggattgcag gctgtgcatt
    13921 ttcgccatca gccaatcgat gttgtgcgcg ccgtactcgc ccaagtaaat ccaaacgggc
    13981 acggaaatca gcgcggcaag cccgtccata atcagaaagc gcagatacga tactttgcgg
    14041 ctgatgccgg cggtaacgaa aacggcagtc cgcaaacccg gcaggaagcg ggcgacaaac
    14101 agaacccagt tgccgtattt gtcgaatttt tcctgaacct gtgcgtaacg tttcggcgtc
    14161 atgatgcgcg caatcggttt gaacttgagg attttctgcc cccaaattcg tccggcggcg
    14221 aacatgatgc cgtccccgac caatacgccg agcataccga ctgcaaacat aatatgcgga
    14281 ttggtataac ccatacccga aatcacgccg cctgttacca aggtcaaatc ctcggggatc
    14341 ggcacgccga aaccgcagat gaccaaaacg aaaaacacgg ccgcatagcc gtattcgaca
    14401 aaaaaggctt ccaaaagggc aaacatagcg gatattccat tgtcggagat aaaaagtcag
    14461 aacaagccga aacattttct gcgcgaaacg gcattctatc aaagattatg ccgtctgaaa
    14521 gcggcaaggg gcagattcgc gccctctgcc ggacgttcag acggcattta aacaggaaaa
    14581 ccgccgctgt tgaaacggtt ttgcctgatt ttgcctaaag gctgccgatg gcggaagcaa
    14641 tacgttccgc accgtcgcgc gcccaatccg cctgccgcgc ctccaccatc acacgcacga
    14701 cgggttcggt tcccgaagcg cgcaacacga cacgcccttt gccttcgagt tctttttcca
    14761 cttccgccaa cacgtctttt gaggcttcct gccagttttg ccctttgccg atacggacat
    14821 taatcatcgt ttgcggatac ggctgccaat cggcgcaaac ggtggcgagg tcttggttca
    14881 gcgtttgcag tgccgccaaa acttgcagcg cggaaataat gccgtcgccg gtgttgtgtt
    14941 tgtccatgca caaaatatgg ccgctggctt cgccgccgat gagccagccg cgttggttca
    15001 actgttccaa cacatagcgg tcgccaactt tggcgcggca gaaatcgacg ccctgctctt
    15061 tcagggcgtt ttccatcgcc atattggtca tgaccgtgcc gaccacgccg ccgatgttga
    15121 taccttctcg ggcgcgggct ttagcgatga cgtaaatcag gctgtcgccg tcgtaaacct
    15181 taccgttttt atcgaccatc atcaagcggt cgccgtcgcc gtctaaggcg atgccgtagt
    15241 tggcttcatg ctgtaaaacg gcggcctgga gtgtcttggt ataagtcgca ccgcattttt
    15301 cattgatatt gtagccgttg ggttcgtcgc cgatgctgac gacttgtgcg cccagttcgt
    15361 gaaacacctt gggagcgaca ccgtaccccg cgccgttggc ggtatcgata accaacttca
    15421 aaccccgaag gtcggaatgg ctgggaaagg tggatttgca aaattcgata tagcggtcgt
    15481 ccgcaccgct gatgcggcgg gcgcgcccga ggcgtgcaga aggctgggtt ttcatttctt
    15541 cgtcgatttt ggcttcgatt tccaactcga tttcatcgga aagcttcacg ccgccttcgg
    15601 cgaagaattt gatgccgttg tcggaatagg cgttgtgcga cgcggaaatc atcacgccgg
    15661 cggacaggcg caacgcgcgg gtcagataag ccacgccggg cgtgggcagc ggtccggtct
    15721 gtaccacatt cacacccgcc gccgtaaaac cggccaccaa agcggcttcc agcatatagc
    15781 cggaaatgcg cgtgtctttg ccgatgagga cggtcggttt ttggtcggtg tcgtgctgca
    15841 ccaaaacctg ccccgccgca tagccgagtt tcaatacaaa atcgggcgta atcggaaact
    15901 gcccgacttc gccgcgcacg ccgtccgtgc cgaaatattt ttttgccatg tgttgctccg
    15961 agaatgtgaa ccgttgtccg agattataca gtctgtttgt gccctgctgt ctgcaccgtt
    16021 gatgccgtct gaagccgccc cgtccttttc agacggcatg aagtatgcga accgctgttt
    16081 acagattgat gcccaacgct tcccacacct tcaacgcgtc cgccgtcgcc ttcacgtcat
    16141 gcacccgcac aatttgcgcg ccgcgcgcca cagccgccac agccgccgcc acgctgccgt
    16201 gtacgcgcgc cgccgcgtcg gtttcgcccg tcagttcgcc taccatgcgt ttgcgcgata
    16261 cgccgatcag cagcggaaag cctgtttccg ccatcaattc gggcaaatgc ctcatcagcg
    16321 cgatattgtg ttgcagggtt ttgccgaagc cgaaacccgg atcgagcgtg atgcgttgcg
    16381 gtgcgatgcc tgccgcgatg cattccgccg cccgcgcttt caaataccgc gccacttcac
    16441 cgacaacatc ctgatatttc ggattaatct gcatgttttc aggcaaaccc cgcatgtgca
    16501 tcaggcaaat gcccgtgtcc gtctggcgcg ccagcaattc gaccgcacct tcgtcggtca
    16561 acgccgccac atcgttaata atatcgatgc caccgagtgc caacgctttt tccataatca
    16621 ccgtgcggcg cgtgtccaaa ctgacgggaa cgccccaccc cgccacttct gccaatacag
    16681 gctcaacccg cgcccattct tcttcggacg aaacataatc cgcacccggc cgcgtcgatt
    16741 cgccgccgat gtcgagaatg tccgcaccct ctttcaaaag ccgttcggcg tgcgccaaag
    16801 ctgttcgggc gttttgcgaa tacgcgccgc cgtcggaaaa agaatcgggc gtgagattca
    16861 cgatgcccat gattttcggc ttgtccaaac cgatttcaaa ccgtcctgcc tgccaaacgt
    16921 gtcgtgccat ctgaactcct cccaaaataa aaaacagatt atatgccgtc tgaaaccgtc
    16981 ttgtgcgctt cagacggcac cgctattcgg gcggcagacg gcatgttgtc cgaatgtctg
    17041 ctccgccttt gaatctgccg gtatgcctgc tatccgcccg acttttcaaa acaggttccg
    17101 acgattccgc acgcgcctgc cgcctttgcc aagccgtaca ggatttcctg cggcatatcg
    17161 cggttccata atcccgtaat attcgcaatc acgggcagat ggctgatttg gcggactttc
    17221 acgatggatt cgacatccaa acggtaggga tggtctttgg tatggctcaa cacgcccgac
    17281 tcgcccagaa tcaggtggcg gttgccgcgc gagacgacat attctgcggc attcaaccaa
    17341 tcttcggcag aatggtgctt gtctttacac agcaccaagg gaatgttcag gcttccggct
    17401 tcattcaata cggcaagatc ggacatcagc ccgccgccca aatacaggat gtccgccccc
    17461 gcattcaaag ccgcttcgac atggcggacg ttgcggacgc gcaccaatac gggtttccct
    17521 gcgccatgcg ccgatgcggt ctgttccgcc aaccgtctgc accgtccccg cccttcatcc
    17581 gcacttgaag tgtcgtataa gtttgccgaa gtgaaaaacg gatccagaaa cactgcatcc
    17641 gcattgcgcc atactgacgg ttctgcggcg atacggacgg tttccccgcc gccgaaagcc
    17701 acgcctttgg cggcaacgcg gctgtcttcc gcccgatttt cccgactgac ggttttccat
    17761 gtatccaaaa tgcggacggc tttctcgacc tccggcagcg tctgcacctc cctgacgctc
    17821 aaaaccctat cgtcgccgat tgcgccgatg acagtacgct cgtcgccgtg agaaatgtgt
    17881 tctcgcagac ctctgctgcg gataaaggcg acaacgccgg caatgtccgc ttcggcggca
    17941 cgcctgctca tgacaataat catatttcct cctgacacaa gaaacggcct gcccaaaata
    18001 ggatttttgc aagccgtgtt atactgtggc gtgttttaca gattgttcgg gctatggatt
    18061 tattatcggt tttccacaaa taccgtctga aatatgcggt ggccgtgctg acgatactgc
    18121 ttttggcggc aatcgggctg cacgcttccg tatatcgcat cctcacacct gaaaacatca
    18181 gaagccgcct ccaacaaagc attgctcata cgcaccggaa aatctcgttt gatgcggaca
    18241 ttcagcgcag gctcctgccc cggccgaccg tcatcctgaa aaacctgacc attaccgaac
    18301 ccggcggcga ccggactgcc gtttccgtcc aagaaaccaa aatcggattg agctggaaaa
    18361 acctgtggtc ggatcagata cagattgaaa aatgggtggt ttcgagtgcg gaacttgccc
    18421 tgacgcgcga cgggaaaggt gtttggaaca tccaagacct gatcgacagc caaaaacgcc
    18481 aagcctcagt caaccgcatt atcgtcgaaa acagcaccgt ccgcctcaat ttcctgcagg
    18541 aacagcttat cctgaaggaa atcaacctca acctgcaatc ccccgattcg tcggggcagc
    18601 cgtttgaaag ttcgggcata ctggtttggg gaaagctgtc cgtcccgtgg aaaagcaggg
    18661 ggctgttcct ttcagacggc atcggcacgc ccaaaatctc accgttccat tttgaagctt
    18721 ccacttcgct ggacggacac ggcatcacca tttccaccac cggcagccct tctgtccgtt
    18781 tcaacgccgg cggagcggat gccgccggcc tcggcctgcg tgcagacact tccttccgca
    18841 acctccacct gaccgcccaa atccctacgc tggcactcag gaacaacagc attaaaattg
    18901 aaaccgtcaa cggcgcattt accatcggcg gcgaatatgc ccgatgggac ggttcgttca
    18961 aactcgacaa agccaacctg cactccggca tcgccaacat cggcaacgcc gaaatctccg
    19021 gcagcttcaa aacaccgcgc caccagacca acttctccct caattcgccg ctcgtatgga
    19081 cggaaaacaa agggctggac gcgccgcgcc tgtatgtatc gacccttcag gataccgtca
    19141 accgcctgcc gcaaccccgt ttcatcagcc ggctcgacgg ttcgctgtcc gtaccgaatc
    19201 tgcaaaattg gaatgccgaa ttaaacggca cattcgaccg ccaaaccgtt gccgcgaaat
    19261 tcagatacac acatgaagac gcaccgcatc tggaagccgc cgtcgcactg caaaaattga
    19321 acctgacccc ctatcttgac gacgtgcggc aacaaaacgg caaaatattt cccgacaccc
    19381 tcgccaagct gtccggcgac atcgaggcgc acctgaaaat cggaaaagtc caacttcccg
    19441 gcctgcaact ggacgatatg gaaacctacc tccacgccga caaagaccat atcgcgctca
    19501 gccgtttcaa gtcagggctt tacggcggcc ataccgaagg cggcatcagc atcgccaaca
    19561 cccgtcccgc cacttaccgc ctgcaacaga atgcaagcaa catccaaatc caaccgctgc
    19621 tgcaagacct gttcggcttc cacagcttca gcggcaacgg cgacgcggtc atcgacctga
    19681 ccgcgggcgg cgaaacccga aaagagctta tccgctcgct tcagggcagc ctgtcgctaa
    19741 atatttccaa cggtgcatgg cacggtatcg acatggacaa tatcctgaaa aacggcattt
    19801 cgggcaaaac tgccgacaat gccgcaccca gcacaccctt ccaccgattc acgctcaaca
    19861 gcgaaatttc agacggcatc agccgccaca tcgataccga actcttctcc gacagcctct
    19921 atgttaccag caacggctat accaatctgg atacgcagga attgtctgaa gatgtcctta
    19981 tccgcaacgc cgtccatccg aaaaacaaac cgattcccct gaaaatcacc ggtacggtgg
    20041 acaagccgtc cattaccgtc gattacggca ggctgaccgg cggcatcaat tcgcgcaaag
    20101 agaaacagaa aatcctcgaa gacaccctgc tggaacaatg gcagtggctc aaacctaaag
    20161 aaccgtaaac atcctgcgta caaaaatgcc gtctgaaacg ccctcgcgct tcagacggca
    20221 ttgccgtaaa acctacaagc ccaattcccc ccaaatccca tcaatcttcg ccgtaaccgc
    20281 agggtctttt ttgatgacgc gcccccattc gcggtcggtt tctcccggcc atttgttggt
    20341 cgcatccaaa cccattttgc cgccgagtcc gctgacgggg ctggcgaagt cgaggtagtc
    20401 gatgggcgtg ttgtccacca aaacggtgtc gcgcacgggg tccatgcgcg tggttaccgc
    20461 ccagatgact tctttccagt cgcgcacgtt cacatcgtca tccaccacga tgatgaattt
    20521 ggtatacata aactggcgca ggaacgacca gcagcccatc atcacgcgct tggcgtgtcc
    20581 ggcgtactgt tttttcatgc tcaccaccgc catgcggtag gagcagcctt cgggcggcag
    20641 gtagaaatcg gtgatttcgg ggaactgctt ttgcaaaagc ggtacgaaca cttcgttcaa
    20701 cgccacgccc aaaacggcag gctcatcagg cggtttgccc gtgtaggtcg aatggtaaat
    20761 cgggttttcg cgcatggtaa tgcgttcgac cgtaaacaca gggaaataat cctgctcgtt
    20821 gtaatagccc gtgtggtcgc cgtatgggcc ttccaacgcg gtttcgttcg gatgaatgac
    20881 gccttccagt acgatttcgg cacgtgcggg cacttgcaaa tcgttgccga tacatttcac
    20941 cagttccgtc cgcgaaccgc gcagcagtcc ggcaaactgg tattcgctca aggtatcggg
    21001 aacaggcgtt accgcgccca aaatggtggc ggggtcgcag ccgagcacaa cggagacggg
    21061 atacgacgta tcaggattga gtttgcggaa ttcctgataa tccaacgcgc cgccgcgatg
    21121 cgacagccag cgcataatca gcttgttttt gccgatgagt tgttggcggt aaatgccgag
    21181 attttggcgt tttttgtgcg gcccgcgcgt tacggtcaag ccccatgtta ccagcggcgc
    21241 aacgtcttcc ggccagcaat gctgaatcgg aagtttatac aaatcaacgt tttcgccttc
    21301 ccacacgatt tcctgacacg gcgcgttttt caccacgttc ggcgccatgc tccaaatgtc
    21361 tttcagtagc ggcagtttgg aaaacgcatc tttgatgcct ttgggcggtt cgggttcttt
    21421 caaatacgcc agcgtctgcc cgatttcacg cagcttggac acgctgtccg cgcccatgcc
    21481 catcgccaca cgttcgggcg tgccgaacag gtttgccaac acgggataat cgtagcgcgt
    21541 accgtcgggc ttaatcgggt tttcaaacaa caacgccgac ccttcggcac gcagcacgcg
    21601 gtcggcgatt tcggtcattt ccaaatgcgg ggaaacgggg tgggcgacgc gcttgagttt
    21661 gccttgctgc tcgagcatga cgatgaagtc gcgcaggtct ttgtatttca tatttatcct
    21721 ttttgtcctt ttatcctgaa caatccgatt cggataccgc ccctatcctt gcctgtgctt
    21781 cggcatattc tatgccgtga taaaagtcgc gtaccagcgg atgtccgccg ctttgatgaa
    21841 gttgcagcaa agggcgttga ccatcgggtt gggtaacgac attgcaatgc aaaccgaagg
    21901 tgtcggattc ataagagggc agccggttgc agatcatgcc gaaataaacg gcgttttccg
    21961 gattgtcgtg aaagtggctt tgatagtcgt taaaactctt ttcgctgacg gacacccaca
    22021 cgccatattc cagcgtttcc tcatgcccga taatcggaat cggcagcacc gcgcggataa
    22081 agcggtcggt ttggtcggga tagcggatga tgcagaaatc agaatcgcat tctgcttgat
    22141 aagcaatgcg ttcttcttca ctgagttgat tatagggatc gggggcggta aagccgattg
    22201 cgggcatatc ttcatgtttt tcgccgcagg aagtgcaagt gtacataagg tttcagactt
    22261 tcaaaacgag tttgcggtaa agccattcgc cggcaaacag catccccatc aatacatagg
    22321 caatcacgcc tgtataaacc gcccaccaat catatcgccc caaccgggcc aacaaagcgg
    22381 caagcgtccc gttggcaata aagaatacgc accaaacctg cgttacccgg cgggtatagc
    22441 gcacagcttt ttcaggcagg tcgggctgtt gcagccgcgc gagcctttct atgaccgtct
    22501 gtccggcaaa caggctgccg ccgaacaccg ccaacatcat cagattgacg aggacgggat
    22561 accaatacat cgaatcatgc cgcccgaaca ccaatactgc ggcaaaaaac agtgtaataa
    22621 acaaagccgc ataacgctgt tggggcagtt tggcagtcag ggcgcgcagc agccacaacc
    22681 cgcacatcgc cgccgccagc cagacaaacc agcccgcctc cctgccgtaa tatagtggat
    22741 taacaaaaac cagtacagcg ttgcctcgcc ttgccgtact gtctgcggct tcgtcgcctt
    22801 gtcctgattt ttgttaatcc actataccac aaagcgggat aggcaatgct taatacggtc
    22861 agaaaaatat gtccgaaaaa accgggtttc attttgaatc cgcacaaatg ttttcagacg
    22921 gcatccgata aaaacatgcc gtctgaaaaa taattagaaa tacccgatta gcccgcctga
    22981 atcttcaata ccgcctgtac cacgtcgttg acggtgcgga cattgcggaa atcttcagcc
    23041 tgcagcttgc gggctgccac agccattcac gattgcgata tacccggcgg cattcccgac
    23101 tgccgttcag cagaaagcgc acccattcca aaccgctcca atatgcctcg ggcagcatac
    23161 cggcttcaga cggcatatcg tccgaagcag ataaagtcag gctgtaacgc gtccctttgg
    23221 tcagaaccat cgccaaagca taagcaaacg gcgcgcgcgt tgccgatacg gcatatcctt
    23281 ccggcagcgg atcgtccgcc gccaaaacca aaaccgaccc gcatccctct tccaacagtg
    23341 atgccgcttc cgccaatgcc gtttccacac cgtcggcaca cacggccaat gccgtctgct
    23401 cgctcatatc ccgcctcaat atcgaccatt accccgccgt tgcattgtgc accgacaaac
    23461 cgaacgaagt cggcgacacg atttgcgatt tcaacagttc caaccacaaa tcgaaactgc
    23521 gcgccatttc cccgtcgtgc gaggcataaa ctatagtgga ttaaatttta ctagattagc
    23581 agatatgtta ccctcgaaat atgaagataa cacactgcaa attaaagaaa aaagtacaga
    23641 aagaactgct ccattttttt gtactggaag ttaccgcccg ttctgccgcc gatattttgg
    23701 gtatccatcc caattcggca gcactgttct accgtaaaat ccgcacggtt atcaaccatc
    23761 atttggtctt ggctgccgat gaggtttttg aggatcctgt cgagccggac gaaagcgatt
    23821 tcggcggacg gcgtaaaggc agacgtggtc gcggtgcggc aggaaaagtg gttgttttcg
//
LOCUS       DAWKOX010000010        22278 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.010, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000010 DAWKOX010000000
VERSION     DAWKOX010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22278)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22278)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22278
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.010"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(120..1034)
                     /locus_tag="WJK78_000284"
     CDS             complement(120..1034)
                     /locus_tag="WJK78_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ7597262.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1290..2759
                     /locus_tag="WJK78_000285"
     CDS             1290..2759
                     /locus_tag="WJK78_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ7597263.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3011..3382
                     /locus_tag="WJK78_000286"
     CDS             3011..3382
                     /locus_tag="WJK78_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597264.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVE
                     SQCRAELNKRSEWRLTALAMSAEKQAEWENKICACVAQEAPNQLTGNDVMQMLDPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3455..4864
                     /locus_tag="WJK78_000287"
     CDS             3455..4864
                     /locus_tag="WJK78_000287"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ7597265.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDENIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWTEVAAGKGFDLQFALDKVGGKYGFTSGKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATICEAVGDVAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLD"
     gene            4911..5705
                     /locus_tag="WJK78_000288"
     CDS             4911..5705
                     /locus_tag="WJK78_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597266.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAARIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKSDAWLAGLEAIARVHKKRQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSVQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5894..6670
                     /locus_tag="WJK78_000289"
     CDS             5894..6670
                     /locus_tag="WJK78_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ7597267.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            complement(7340..9811)
                     /locus_tag="WJK78_000290"
     CDS             complement(7340..9811)
                     /locus_tag="WJK78_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ7597268.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9808..10986)
                     /gene="hflX"
                     /locus_tag="WJK78_000291"
     CDS             complement(9808..10986)
                     /gene="hflX"
                     /locus_tag="WJK78_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ7597269.1"
                     /translation="MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSADRLNGFQTAL
                     AEAVELVKAAGGDPVLVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLSSLKKQRALRRKSRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(10991..12271)
                     /locus_tag="WJK78_000292"
     CDS             complement(10991..12271)
                     /locus_tag="WJK78_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ7597270.1"
                     /translation="MKSLVIWLLLLGSAAGVFYHTQNQSLLVGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHELAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVNGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERACARRMQQPEAGRKYYRNACHNGAAVYADEVMP
                     ATELLYTAYPVGSGVLPYFYGERPDPMPGYEMTGNPVSIDFSEAAGKITMKSFKLYQG
                     KNEIRPVKVLTAGNDPNGRLTAYQFALFPIKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     KTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRLGSRLSIGRHE
                     AGGIVFSVGGMTGSRITLAPEDSPERGVTLYLQD"
     gene            complement(12424..13149)
                     /locus_tag="WJK78_000293"
     CDS             complement(12424..13149)
                     /locus_tag="WJK78_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ7597271.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASDIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMNQINDCGRRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13222..13899)
                     /gene="radC"
                     /locus_tag="WJK78_000294"
     CDS             complement(13222..13899)
                     /gene="radC"
                     /locus_tag="WJK78_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ7597272.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQEGIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            complement(14022..15371)
                     /gene="gshA"
                     /locus_tag="WJK78_000295"
     CDS             complement(14022..15371)
                     /gene="gshA"
                     /locus_tag="WJK78_000295"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ7597273.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDALGMPRSEKDCDVDNVHNRLYVYGVMARLSLLAASIELEETA"
     gene            15631..17040
                     /gene="leuC"
                     /locus_tag="WJK78_000296"
     CDS             15631..17040
                     /gene="leuC"
                     /locus_tag="WJK78_000296"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ7597274.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAIEFGGEAILSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPKGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17137..17391
                     /locus_tag="WJK78_000297"
     CDS             17137..17391
                     /locus_tag="WJK78_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597275.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17453..18094
                     /gene="leuD"
                     /locus_tag="WJK78_000298"
     CDS             17453..18094
                     /gene="leuD"
                     /locus_tag="WJK78_000298"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ7597276.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18269..19090
                     /gene="dcm"
                     /locus_tag="WJK78_000299"
     CDS             18269..19090
                     /gene="dcm"
                     /locus_tag="WJK78_000299"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7597277.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDSTQKIGRTLTVILETLEALGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGAVTEEEKQLLNILLKERRKKNGLQKSA"
     gene            19105..19539
                     /locus_tag="WJK78_000300"
     CDS             19105..19539
                     /locus_tag="WJK78_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ7597278.1"
                     /translation="MPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGQRI
                     KDESLPKGYNIVSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGL
                     RLFGYPDDYSFDIPKKDRCDLLGNTVVVPVIKAVSERLLHTL"
     gene            19555..19716
                     /locus_tag="WJK78_000301"
     CDS             19555..19716
                     /locus_tag="WJK78_000301"
                     /inference="COORDINATES: protein motif:HMM:NF021105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ7597279.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGG"
     gene            19717..20286
                     /locus_tag="WJK78_000302"
     CDS             19717..20286
                     /locus_tag="WJK78_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ7597280.1"
                     /translation="MRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNTGPG
                     FDIADFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWA
                     INLQVKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKK
                     KFEEAYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20320..21390
                     /gene="leuB"
                     /locus_tag="WJK78_000303"
     CDS             20320..21390
                     /gene="leuB"
                     /locus_tag="WJK78_000303"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ7597281.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKEYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAILAAL"
     gene            21553..22116
                     /locus_tag="WJK78_000304"
     CDS             21553..22116
                     /locus_tag="WJK78_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ7597282.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSTTIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5404 a         5854 c         5768 g         5252 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcagaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggtg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agttttccgg atgatggtta tcaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccctttt
     1261 acgaggcacg atatataagg aggaaggtta tggaaaaaca taatgggact tatcgggatt
     1321 tgcaccgtcc ggcttcggaa tttgcaacgc gggacgaata tttggaacat gaattgcaga
     1381 ttatgcaacc aaaacgctgg cggcccaacc tgccctttcg cgattaccgc ttcgagtggg
     1441 aggatttgat tcctgcgatg gcggggacga ttggaaaagt ggtgatggtg ggggcggtgg
     1501 cggcggcgtt tgccgcacct ttggggctgc ctgacagctt tgtactggaa aatgtgcgct
     1561 atgagctttt aatcgccgcc gcgtttatct tattggtatc gggctttttt ctgcccggcg
     1621 ccaacctgcc cggtacgcac gggccgctga ttccgatgat tcccatcgtt gtgtcggcag
     1681 gcgggcatcc tttggcgttc ggcatttcga ttgcggtttt aggtctgctg atggctttat
     1741 ttcgcggcgg cagtattatg gcgaagctga caagcaacgg cgtatgcggc ggattattac
     1801 tctatttggg ctttatcggc acgacggggc aggtaaaaaa attgttttcg tgggcaggcg
     1861 gttttaatat gccctacatc gcttttaccg tcattattgt aacgattgtg atgtacgctt
     1921 tgttggagca ttggaaaaaa cgctggttag ccgtgccttt gggatgcttg attgccggtg
     1981 tggtggcatt tgcattgggt gcgccgtttg agtttcacac cgcccccggc ctgcctccaa
     2041 tgagtcctgc ttattggtgg ggtgaaaaca gcggctggca tctggggttg ccgacggcag
     2101 aaagtttttt ggttgtcttt ccatttgcgg tattggctgt tgcaatgtgg tcgcccgatt
     2161 ttttaggaca tcaagtgttc caaaaaatca gctatccgga aaaaaccgat aaggtattga
     2221 tgaatataga cgacaccatg acaagttgtt ctgtccgtca agcagtgggt tctattttag
     2281 ggggtgcaaa ttttacctct tcttggggaa cttatatcgt accggcatcg attgccaaac
     2341 gccccattcc gggcggtgcg gttttaacgg cggttttatg tattatcgcc gggttgtggg
     2401 gctatccgat ggacttggcg atttggcagc cggtattgag cgtagccttg gtcgtaggcg
     2461 tatacttacc gcttttggaa gcgggcatgg aaatgacgcg caaaggcaaa accacccaat
     2521 ccgccgccat cgtggtgttc tcttccgcct tggtcaatcc ggttttcggc tgggcgttga
     2581 cgatgctgtt ggataatttg ggcttaatcg gctgcaaaga gcgcagtgcg caattaggtt
     2641 tcgccggacg cgtgttgata cccgcagtag gtttcttgat cttgtgtgtg gcgatgggtg
     2701 cggtcgggat gctgcccggt atcccgccgt ttttggaaca cttcaaatct ttgggctagg
     2761 ctgaaatcgg aaatgccgtc tgaaccgctt tcagacggca tttttgcaaa caggcaaaat
     2821 gacggcggcg ggatttttta ttttcccgat tgaagtataa tgttgccggg cttcaaccgg
     2881 atattcaaaa cggtttgttc caacactcgg aacggcgcat aaaacgccgc ccttcgcgtt
     2941 atcccgaacg gggcggctaa tcagattcta tcgccataaa aggcggggtt tcaaccgaaa
     3001 aggaattgag atgaataaaa ccttgtctat tttgccggtg gcaatcttac tcggcggctg
     3061 cgccgccggg ggcggtaaca cattcggcag cttagacggc ggcacaggta tgggcggcag
     3121 catcgtcaaa atggcggtag aaagccaatg ccgtgcggaa ttgaacaaac gcagcgaatg
     3181 gcgtttgacc gcgctggcga tgagtgccga aaaacaggcg gaatgggaaa acaagatttg
     3241 cgcttgcgtc gcccaagaag cacccaacca gctgaccggc aacgatgtga tgcagatgct
     3301 ggatccgtcc acgcgcaatc aggcacttgc cgccctgacc gccaaaacgg tttccgcctg
     3361 cttcaaacac ctgtaccgct aaccttcttc agacggcatg aggcagatgc cgtctgaagc
     3421 cgttttcctg caatttcgac agacgagaaa aatcatgaaa tacatcagca cgcgcggcga
     3481 aaccgcacac aaaccgttca gcgaagtttt attgatgggg cttgcccccg acggcggcct
     3541 gatgctgccg gaacattatc cgcaaatcgg gcgcgaaacc ttggacaaat ggcgcggttt
     3601 ggcttatccc gaattggcgt ttgaaattat gcgcctgttt gttacggata ttccggagga
     3661 cgatttgcgc gacattctga accgtactta cacggaagcg gcgttcggta ctaaggaaat
     3721 cacccccgtc cgcacgcttt cagacggcat caaaatccaa gccttgtcca acggcccgac
     3781 gctggcgttc aaagatatgg caatgcagtt tttgggcaat gcgtttgaat atgttttaaa
     3841 caaagaaggc aaaaaactca atatcttggg cgcgaccagc ggcgatacgg gttcggctgc
     3901 ggaatatgcc ttgcgcggca aaaagggcgt gaacgtattt atgttgtcgc ccgacggtaa
     3961 aatgagcgcg ttccaacgcg cgcaaatgta cagcctgcaa gacgagaata tccacaatat
     4021 cgccgtgaag ggaatgtttg acgactgtca ggatattgtg aaggcggtgc agaacgatgc
     4081 cgcgttcaag gaaaaatacc atatcggtac agtcaattcg atcaactggg gacgcatcgt
     4141 cgcgcaagtg gtttattact ttgcaggcta tttcaaagcg acgcaaagca atgacgagca
     4201 agtcagcttc tgcgtgccga gcggcaactt cggcaacgtt tgcgcgggac acatcgccaa
     4261 acagatgggt ttgcccatcc gccgcctgat tgtcgcgacc aatgaaaacg atgtgttgga
     4321 cgagtttttc aaaaccggcg cgtaccgtcc gcgcaacagc gcgcatactt atgttacctc
     4381 cagcccgtct atggacattt ccaaagcgtc caatttcgag cgtttcgtgt tcgacctgat
     4441 ggatcgcgat cctcaggaaa tcaatacgct gtggacggaa gtcgcggcgg gcaagggctt
     4501 tgacttgcag tttgccttag acaaagtcgg cggcaaatac ggctttacct ccggcaaatc
     4561 tacccacgcc gaccgcctcg ccaccatcaa acaggtttac gagcaagacc aagaactcat
     4621 cgacccgcac actgccgacg gcgtaaaagt cgcccgcgaa gtgcgcgaag aaggggaaac
     4681 ggtggtttgt ttggaaaccg cgttggcagc gaaattcgat gcgaccatat gcgaagccgt
     4741 cggcgatgtc gccattccgc gtcccgccgc gctggaaggt ttggaaaacc tgccgcagcg
     4801 cgtgcaaacc gtgccgaaca gtgcggatgc ggtaaaaggc atcatcgaac aaacccttga
     4861 ctgatgttcc gtatgggcgg cattccgtcc gaacttaaga ttgaaagaaa atgaccttac
     4921 ctatgcagga aacccgtttt tccatactgc tggacgaatt agcggcaaaa caggaagcag
     4981 ccatcgcccc ccacctgctt gccgacggaa ccaaggtatg gatacgcaaa gcaggcaggc
     5041 acaatgcgcg atggcgttac gcgctgctcg gtatggttgc ccgatatttg aaactggggg
     5101 tgttgaagcc ggttcccagc ctcggcggcg agcctgccat tgcaaccgaa tcaaaacgcc
     5161 tgtacgaatt gcgcgcggcg aggatagccg ttcccgaatt gctcgccgtc cggaaaaatg
     5221 cccttatgtt cggcaatttg gaaggcatcc cgctcgatac gcaaatccgc caagaagccg
     5281 aggctggaaa gtcggacgct tggcttgccg gtttggaagc cattgcacgc gtgcataaaa
     5341 aacggcagtt cctcagtcag gcgtttgcgc gaaatatgat gtcggacgga aaaaacatca
     5401 gctttttgga ttttgaagac gacccttccg aagtcctgac catagcgcaa tgccaagccc
     5461 gcgattggct ctgctacatc cattcgaccg cgctgatatt gaaaaacggc ggactgctgg
     5521 aagcggctgc ggaaaaatgg ggcggcgtat tgtcggttca gcctgccgaa atacaaaagc
     5581 tgattgccgc caccgtcaaa ccgatcctcc cgatacgcag gctggaacac ccccgctggg
     5641 gacgggacgc gctcaggctg gcagcctcga tttctctgat ttcccttgcc gatatgccgc
     5701 cgtaagccgc cgcccgccgc gcgatgccgt ctgaaagccc ttcagacggc atataaccaa
     5761 cgcgtatcaa gcattgtcgc aaccatccgt ttcgtttaga attttggctt taccccgaat
     5821 cgggcagaca ttttcactct gccgcacatc ccgaacaagc actatccatt tcttttactg
     5881 acaggaaacc caaatggcag cattcaatac ccaaaaagta ttgtccgtac accactggac
     5941 agacgcatat tttaccttta cctgcacccg cgacgaatcg ttgcgctttg aaaacggaca
     6001 gttcgttatg gtcggattga tggtggacgg caagccgctg atgcgcgcat acagcgtcgc
     6061 ctccgccaac tgggaagaac acctcgaatt tttcagcatt aaagtccaag acggtccgct
     6121 gaccagccgc ctgcaacacc tcaaagtcgg cgacgacgtg ttaatcagca aaaaaccgac
     6181 cggaaccctg gttgccggcg acctgaatcc gggcaaacac ctttacttgt tgagcaccgg
     6241 taccggcatc gctcctttct tgagcatcac caaagacccc gaaatttacg agcaatttga
     6301 aaaaatcatc ctcgtacacg gcgtgcgcta caaaaaagat ttggcgtact acgaccgctt
     6361 taccaaagaa ttgcccgaac acgaatacct cggtgacttg gttaaagaaa aactgattta
     6421 ctacccgatt gtttcgcgcg aagaattcga acaccacggt cgcctaaccg acctgatggt
     6481 gagcggcaaa ctgtttgaag acatcggcct gcccaaaatc aacccgcaag acgaccgcgc
     6541 gatgctgtgc ggcagccccg cgatgctgaa agatacctgc aaagttttgg acgatttcgg
     6601 tctgaccgtc tctccgaaaa ccggcgtgcg cggcgattac ctgattgagc gcgcgtttgt
     6661 ggatcaataa gctgcttgaa aatgccgtct gaacggcatc agcgataaaa aaacccgaat
     6721 cctgccaatc aggattcggg gtttttatag tgggtaaaaa ttagaaatgc acatttccgt
     6781 cattccaaca caggtgggaa tccggactta cctgtttcat tatcgtttga aaataaaaga
     6841 gaaaccaaac atatagattc ccgcttgcgc gggaatgacg acggtgtttt gccgtagcca
     6901 aagcagaaaa acatccctat tgtcatttca tcatgatatg acaataggat gttaaaaatt
     6961 aattatcatt atatgattga tatataagaa aaactgtccc aataagaaat gttatgcaga
     7021 aaataaaatg aaaaggatgg ttttcattga aaatggttgt tctgccaccg tcatacacag
     7081 agccagtatt tggaaaaaaa ataatccata ttgacatcat tattccattt gtcgcataaa
     7141 tccacttttt aatttttttt cctcattaat ataatctctt atttaataaa atcaaaataa
     7201 aaatcaaatg cctaacaatt cgatctcaaa ttttgaacgc caacgtgttt gagcggtaac
     7261 aatacatact ttaagtttgc aattcttcat cgtcttattt ttgttttcat caactatacg
     7321 tctaaagcaa cgccgtccgt cattgttcgg acggcatttt ttcagactgc attttccccc
     7381 gtttgtgaag gcgcagggcg ttgcccaaaa ccgccagcga actgaagctc atacccagtg
     7441 cggctatcca cggttggaca tagcccaaaa cggcaagcgg tacggcaatg atattgtacg
     7501 cgcccgccca tatcaggttt tgccggataa tatggcgggt gcgccgcgcc tgatcgagca
     7561 ggtgggcgac ggtacgcaaa tcttcgttca ataacacaat gtccgcgccg tccctcgcaa
     7621 tatccgtccc gcccgctgcg gcggcggata cgtctgcctg cgccaaaacg ggcgcgtcgt
     7681 tgatgccgtc gcctatcatc agcacttttt tcccttcttt ttgcaaggct ttgacgtatt
     7741 ccagtttgtc ctcgggcatg gcttgggcgc ggtagtgcgc gacacccagg gcgcgtgcgg
     7801 tttcggcaac ggcggtttcg cggtcgccgc tgaggatgtg cagggtcagg tttttgcctg
     7861 ccaactgccg caccgcctcc gccgcgctgt ctttcaaggg gtcggtcagg tagaacacgg
     7921 cttggaaacc gctttgactg ccgaggtaaa ccgcgctgcc gccgccttct gtttgcggtt
     7981 ctttacctga aatttcggcg acataggatg ccctgcccaa tgcccaaacc tgtgtttcgc
     8041 cgttgacggt cagttgcgcg cccacgcctt cgccgatgcg gttgaggcgt tgtttaatag
     8101 cgatgtcggg gacgctgccg tctgaaatgc ggcagttgag gatggcgcgg gcaaggggat
     8161 gttcggactg ttgttctaaa gcctgcgcca ccgcgagaac aaaggcttcg tctgtgcctc
     8221 tcaacaatga gatacggcgg acggcgggtt tgccttgggt cagcgtgccg gttttgtcga
     8281 agatgatgtc ggtggtttgg gcgagggttt cgattgcctg ctttccgccg attaaaatac
     8341 cttcgcgcgc cagcgtaccg gtagaagctg ccagcgcggt cggcgtggca agcgataagg
     8401 cgcaggggca ggtaatgacc agcagggcga cggtaatcca caatgcggtg tgcgcgtcgg
     8461 cgtacagcgt ccagccgatg aagacgggga cggcaagcag gagttcgccg aatatgaaag
     8521 acgaggcgta ttgttccgcc aactcggcag tgcgcggttt ttgcgctaag gcgcggtcga
     8581 gcaggcggac gatgtgcgac agtcgcgtgc caccgccggt gcggtcggtg cgtataatca
     8641 gggggctttg cgtgttgagt gtgccggcgg ttactttttc agacggcatt ttggcgacgg
     8701 gcaggctctc gccggtcagc atagattcgt tgacggcact gcttccttcc agcaccgtgc
     8761 cgtcaacggg gatggtttcg cccggtttga ccagcacgat atcgcccgcc ttcaatttga
     8821 cgacagctgc ctcgcaggtt tcctgcgtat cggggtaatc gggcatatga tggcaaaacg
     8881 caggaatcag cttcaccagc ctctcggcgg catcgcctgc cttacggcgg gcaatgtgtt
     8941 ccataaagcg tccgcccagc aggaaaaaca gcagcatcgc gatggattcg aaatacatcc
     9001 cctgccccgc atttgtcgca aggctgtaaa cgccggcgat aaaggtcatg atgatggcga
     9061 cggtaatcgg cgtatccatg ccgacgcggc ggtttttcaa gtcgcgcagc gcgccttgat
     9121 aaaacgggac ggcgcaatag aatacgacgg gcagcaccat taaaaagccg ccccaatgga
     9181 ggatttgcag gaaatcgggt tcgatgtcgc cgccgtaaag gtaggtcggc agcgcgaaca
     9241 tcatcgtctg catcatcccc agcccggcaa cggcgaggcg gacgatgtat tgtttgcgtt
     9301 ctttttggtt ggcggcttcg attttttgcg cgtcataggg tgcggcggtg tagcctatct
     9361 gcctgatttt caacagaatg tcggaaaggc ggattttgcc gtcgtcccag acgacgcggc
     9421 agcggtgcgt gctgtaattg aggtcgatgc ggacgatgcc gtctgtacgc aaaagctgct
     9481 gttcgatcag ccagacgcag gcggcgcagg tgatgccgcc gagcattaaa accgcctcgc
     9541 gcgtgccgcc gtgggtttcc acaaagtcgg actggacttc gggcaggtcg tacaggcgga
     9601 tttggtcgag gatttcttgg ggcggcagct cggttttttg cgcgtcggcg gtgcgttgtt
     9661 tgtaataact gcccaagccc gcgtcaataa tgctttgtgc gaccgcctga cagccggcgc
     9721 agcaggtttc gcggtcttcg ttttcgtaac ggacagtcag gtggaggtgt tcgggaacat
     9781 ccagaccgca gtggaaacag gtttttttca tggcatttcg gtttcgtctg tgtttggtgc
     9841 ggcggcacaa gactcggcaa tggcttcgcg cagtgcgtct ataccggtat tttcagcaac
     9901 ggaaatgcgg acggcggcaa tttttcccgc agcgtcgcgc catatgcccg tgttttgttc
     9961 ttcagacggc agcaggtcgg ttttgttgta caccttgatg cacggaatat cgccggcatg
    10021 gatttcttgc agtacgtttt ccacgtcttc aatctgctgt ccgctgttcg gagcggcggc
    10081 atcgacgacg tgcagcagca catcggcttg cgcggtttct tccagcgtgg cggaaaaggc
    10141 ggaaatcagt ttgtgcggca gatcgctgac gaatccgacg gtatcggtca ggataatgct
    10201 gcattcggga ctgatgtaca gccgccgcgc cgtcgtgtcg agtgtggcga aaagctggtc
    10261 tttcgcatat atgcccgact tggtcagccg gttgaacagg ctggatttgc cgacattggt
    10321 atagccgacc agcgcaaacg ttttgattgt gcccgattcg cgggacttgc ggcgcagggc
    10381 gcgctgtttt ttgaggctgg aaagctgttt tttcaaggcg ttgattcgat gggcgatcaa
    10441 tcggcggtcg gtttccagtt tggtttcgcc cggccctttc atgccgatgc cgccgcgctg
    10501 gctttgcagg tgtccgtaac cgcgtatcaa gcgtcccgcc aaatggctca actgcgccaa
    10561 ttcgacttgc agcctgcctt cctgcgtgcg ggcacggcgg gcaaaaatcg ccaaaatcag
    10621 ccctaccctg tccaacacgc ggcattggag gattttttcc aaattgcgct cctgcgtggg
    10681 cgtgagttcg tggttgaata cgaccaaatc gatgccgtct gcggcaactg cttctgacag
    10741 ctccgccgcc ttgcccgtac cgacaaacag cgcggtgtgc gggcggtcgc gtttggcggt
    10801 ttccacaagg acgggatcgc cgcctgccgc tttgaccagc tcgacggctt ccgccaatgc
    10861 cgtctgaaaa ccgttcagac ggtcggcact gctgcccgta ccatctttgt ccaacattac
    10921 gcccaccagc atgacgcgtt cgggttgcgc ttgggtactg ccgttgcggc ctgttctgcc
    10981 tgtcatgtat tcaatcctgt aaataaaggg taacgccgcg ttccgggctg tcttccggtg
    11041 caagcgtgat gcggctgccc gtcattccgc caacgctgaa gacgatgccg cccgcctcgt
    11101 gccgtcctat ggacaggcgg ctgccgagcc gctgccggta ggtataacgg gtacacgctt
    11161 ccagacacca gcgtccgcgc cagtgaatga aatatttttc gccttttcta accgcaagcg
    11221 tctcgccgcc gtttacctca aaataagggt aatcgggttt tcgggtttta aactgccatt
    11281 tcgcctgcgc gcgccgtccg ttgcggacat agtcgaatac cgccgtataa agcgtaccgt
    11341 actccaaagg cttgatcggg aaaagcgcga attggtacgc cgtcagcctg ccgttggggt
    11401 cgttgccggc ggttaaaact ttgacgggac ggatttcgtt tttaccctga tacagcttga
    11461 aacttttcat cgtaattttg cctgccgcct cagaaaaatc aatgctgaca ggattgcccg
    11521 tcatttcata tcccggcatg gggtcgggac gctccccgta aaaataaggc agcacgccgc
    11581 tgccgactgg ataggcggta taaagcaatt ccgttgcggg catgacttcg tcggcataaa
    11641 cggctgcacc gttatggcag gcattacggt aatatttccg tcctgcttcc ggctgctgca
    11701 ttctccgggc acaggcgcgc tcaaacctgc cgttaccttg gttgaatacg agaacggttt
    11761 taccgttttc gcgcacaaat gccgctcctg cctcatccgt atggcggtca agcagggaaa
    11821 ggcggtggta gattgcgctc atcaatccgt taacctggcg ttgctgcgtg cggatatcgc
    11881 tgtcggacga ttcggcggct tcctcttccg tgctgatgtt ttcatgtacg ccattgtaaa
    11941 gataaccggc aaggcgtgtg cgttcggtca gcttttgtgc ggtgtagtgc ggattgtcgg
    12001 gatggtgttc gccgtgtccg tcttcgggat taagcgtgag ataacgtgcg tgcctgcggg
    12061 cggagttttc caaaaccggc gcgtgtgcca gctcgtgcaa accgatttgt gcgcggatgc
    12121 ggttgaggta gtgcagcgcg tcgccgccgt ccctgatttg cggtgcagac ggatagacaa
    12181 gttctcccac aagcagggat tggttttggg tatggtagaa aacgcctgcc gccgaaccca
    12241 acagaagcag ccagataaca agggatttca tgatgtcgcc ctctcgcccc ggcaacggga
    12301 tatttcatga aaacggcaaa cttgaaaatc acgtttccgc ttgccgattg ccaaaccggc
    12361 aaacctttcc ccgtgccgat gccgaacccg atgccgtctg aaccttcaga cggcatcagg
    12421 tgtttatttg tccacccgga tgggtgcagg ttcgtattgt gtcgattcgt cgccgtaata
    12481 cagcacgccg agtttgatgg ggatgcgtcc ctgcgatttg cggtgggcat tggaatcgcg
    12541 caaggaatag gcgcagccgc aatattcctg ctggtagaag ttttcacgtt tgctgatttc
    12601 aatcatacgc gcgctgccgc cgcctttgcg ccagttgaaa tcccaataca ccacatcatc
    12661 gtaaggcgcg gcggcgcggc ggccgcagtc gttaatctgg ttcatgtttt tccaacggga
    12721 aatgcccagc gagctggtga agacgggaaa cccgtgttca tgcgcatatt gcgccgcctt
    12781 ttcgaaacgc atatcgaaac acatggtgca gcggatgccg cgctcaggtt cgaattccat
    12841 acctttggct ttggcaaacc attctttgcg gtcgttttcg taatcgtcgt ctttgtcgat
    12901 gaaggggatg ccgaactttt ccgcaaagcg tacgttttcc tcttttcgga gcatatattc
    12961 tttgtgcgga tggatattgg gattgtaaaa ataaatggtg taatcaatgt cgctggccag
    13021 catggcttcc atcacttcgc cgctgcacgg ggcgcagcag gaatgcagca agactttttt
    13081 atgtccgccg ggcgggacga gtatggggcg gtcaatgtcg gtaacggtag gtttgttttg
    13141 tgtttccatt aacttaacaa tatctgtcga atacggttga agcggctatt ttatcagagc
    13201 cgccgcatgt aaaacagggt gtcagggcat cagcccgagc tgtctgaacg aacggacggt
    13261 ttgcgccgtt acgataaaat ggtcgagcag cgacacatcg accagcgaca ttgcctgtgc
    13321 cagccgcctt gtgaacatga tgtcttcctg cgaaggttcg ggcgagccgc ccggatggtt
    13381 gtgcgcgata atcaggctgt cggcatattc gtccaatgcc agtttgacga tttctcggat
    13441 gtaaatcgtg ttttccgcaa ccgtaccgcg cgacagctct ctgaccgcaa tcagttggtt
    13501 ttggcggttc agcagcagtg cgacgctgac ttcgactttt tcctgtccca aatgaaagcg
    13561 caggtaatcg gcaaccgtat cggggtcgga caggacgatg ccctcctgca attcttccgc
    13621 caatatccgc cgcccgattt ccctgaccac ggcgaactgt gtgaaacttg ccgtccccat
    13681 ccctttgtat gccgacagtt tgccgacctc cgcgctcatc agcctcccca aactgccgaa
    13741 ctcctgcagc aaataacgcg ccaaatcgac cgcactcatt ccgcgcgtgc cgacgcgcag
    13801 caggattgcc aaaagttcgg catcactcaa agccgccgcc ccgcgttcca acagcttttc
    13861 cctgggcctt tcgccttccg gccattgctt gatgctcatg ttttcccttt tttaaatagt
    13921 ctgagatgcc gtctgaaaca aatgttccca cacgccaaat atccgaaatg ccgtctgaac
    13981 cggatttccg cttcagacgg catctgtatt tcaaaacagt cttacgccgt ttcttccaac
    14041 tcgattgaag ccgccagaag cgacaggcgt gccatcacgc cgtacacata gaggcggttg
    14101 tggacattat cgacatcgca gtctttttca gaacgcggca tacccagcgc atcccattgc
    14161 tcaaatacgc gcttgcaggc ttcgggtgct tcttgggaat tatcgccatt gccggtagga
    14221 atgctattgg acagcggcac aaacaccata ccgccggcgt tgaggttttc gtccgcaccg
    14281 cgcccttcgt gtacgcggaa aaagccgccg atgacgaagc ggtccatcat atacacgacg
    14341 ggttcgcaca ccgcgccgtt taaggtttca taagtataaa tcccttcttg gacaatcact
    14401 tcgctgactt ccaagccttc tttgactttc gccattttat tgcggttttt acggttcaat
    14461 ccgcgcactt cgtcggcgga tttgacgctc atcacgccca tgccgtaagt gccggcatcg
    14521 gctttgacga tgacgaaagg tttgtcggta atgcccgatt cgtcgtattt ggcttgaatt
    14581 ttcgccagca cacgttctac cgcttccgcc aacgcgtctt cgccttcacg cccttggaag
    14641 tccaaaccgc cgattttttc aaaataaggg ttaatttgcc attcgtcgat gccgattaac
    14701 ttggcaaatt cggcggtaac ttggttgtac gcgccgaaat gatttgtttt gcggcgcgtc
    14761 gtccaaccgc cgtgcaacgg cggcaaaacg gtttggctga tgcctttgag gatgtcggga
    14821 atgccggcag acaaatcgtt gttcaacaaa accacgcaag gcgaaaagcc gtctgcaaga
    14881 tggacgcggt cgcgggtacg caataaaggt tccaacagga ttttgtcgcc caatgcagtt
    14941 tcaaattcgg tcggttcggt tacttccgga ttcaggctgc ccaagcgcac ttcataccct
    15001 gccgaacgca aaatctcgcc gagggcgtaa atgttttgca ggtaaaacgt attgcgcgtg
    15061 tggttttcgg gaataatcaa tacggatttc gccgtttcgc aggcgcgttg caccgcatct
    15121 tgcgcggcaa ccgccgccag cgggataaag ttgggattca gattattgaa gccgccgggg
    15181 aacaaattca tatcgataga cgaaattttg taaccggcat tgcgtatatc gaccgaaccg
    15241 taaaacggcg ggcggtgtac gctccactgc gtgcggaacc acgcctcgat tttggcgtga
    15301 ttggacagga tttttgcctc aaacgcctga agttgcgccg aatgttcggg cgacatcacc
    15361 ggtaatttca tctttcgtct gcctctgtgt gttttttgac aagatgcaga tgataatgcc
    15421 tttgaaagaa tgacgacaag tattctttcg tatcgaatca tgctttagat ataacggttt
    15481 actgaaatgg acaatacgtc taattttttc gttaaaattg tttgcaaaat aacaccggct
    15541 caaaaattag acaaaatttg ttgcgcggta taaagaatac gtctaaaatc cgcccaatcc
    15601 gcattaccat ttatccaaaa gaacaacatc atgacagcac aaaccctcta cgacaaactt
    15661 tggaacagcc acgtcgtccg cgaagaagaa gacggcaccg tcctgctcta catcgaccgc
    15721 catttggtgc acgaagttac cagccctcag gcatttgaag gcttgaaaat ggcggggcgc
    15781 aagctgtggc gcatcgacag cgtcgtctcc accgccgacc acaacacccc gaccggcgat
    15841 tgggacaaag gcatccaaga cccgatttcc aagctgcaag tcgatacttt ggacaaaaac
    15901 attaaagagt ttggcgcact cgcctatttt ccgtttatgg acaaaggtca gggcatcgta
    15961 cacgttatgg gccccgaaca aggcgcgacc ctgcccggta tgaccgtcgt ctgcggcgac
    16021 tcgcacactt ccacccacgg tgcattcggt gcgttggcac acggcatcgg cacttccgaa
    16081 gtcgagcaca ccatggcaac ccagtgtatt accgcgaaaa aatccaaatc catgctgatt
    16141 gccgttgacg gcaaattaaa agcgggcgtt accgccaaag acgtggcact ttacatcatc
    16201 gggcaaatcg gcacggcagg cggtacaggc tacgccatcg agtttggcgg cgaagccatc
    16261 ctcagccttt ctatggaagg ccgcatgact ttatgcaata tggcgatcga agccggtgcg
    16321 cgctcaggca tggttgccgt cgaccaaacc accatcgact atgtaaaaga taaacccttc
    16381 gcacctaaag gcgaagcatg ggacaaagcc gtcgagtact ggcgcacgct ggtgtctgac
    16441 gaaggtgcgg tattcgacaa agaataccgt ttcaacgccg aagacatcga accgcaagtc
    16501 acttggggta cctcgcctga aatggtttta gacatcagca gcaaagtgcc gaatcctgcc
    16561 gaagaaaccg atccggtcaa acgcagcggt atggaacgcg cccttgaata catgggcttg
    16621 gaagccggta cgccattaaa cgaaatcccc gtcgacatcg tattcatcgg ctcttgcacc
    16681 aacagccgca tcgaagactt gcgcgaagcc gccgccatcg ccaaagaccg caaaaaagcc
    16741 gccaacgtac agcgcgtgtt aatcgtcccc ggctccggtt tggttaaaga acaagccgaa
    16801 aaagaaggct tggacaaaat tttcatcgaa gccggttttg aatggcgcga accgggctgt
    16861 tcgatgtgtc tcgccatgaa cgccgaccgc ctgaccccgg ggcaacgctg cgcctccacc
    16921 tccaaccgta actttgaagg ccgtcaaggc aacggcggac gtacccacct cgtcagcccc
    16981 gctatggcag cagcagccgc agtgaccggc cgctttaccg acatccgcat gatggcgtaa
    17041 gtattttcag gcggtcttta agaatttgac gcggccgtct gaaatatgtc ccgtaaggca
    17101 gaaacacctt taatattcaa accaaggagt ttaaccatga acaaactttt cattaccgcc
    17161 ctgtccgccc tcgccttgtc cgcctgcgcc ggcacttggg agggcgcgaa acaagacacc
    17221 gcccgcaacc ttgacaaaac acaggccgcc gccgaacgcg ccgccgaaca aacaggcaac
    17281 gccgtcgaaa aaggctggga caaaaccaaa gaagccgtca aaaaaggcgg caatgccgtc
    17341 ggacgcggca tttcccatct cggcggaaaa atcgaaaacg ccaccgaata accgattcgc
    17401 gatgccgtct gaaaccgctt cagacggcat cgtcagcaca agacgcaaac ccatgaaagc
    17461 ctttaccaaa attaccgcca tcgtcgcccc gctcgaccgc agcaacgtcg ataccgacgc
    17521 catcatcccc aaacaatttt taaaatccat caaacgcagc ggcttcggcc ccaatgcctt
    17581 tgacgaatgg cgttacctcg accacggcga accaggcatg gacaacagca aacgcccgtt
    17641 gaaccctgat ttctcgctga accagccgcg ttaccaaggc gcgcaaatcc tgttgacgcg
    17701 taaaaacttc ggttgcggct cttcacgcga acacgcccct tgggcattgg acgactacgg
    17761 cttccgcgcc gtcatcgccc ccagcttcgc cgacatcttc ttcaacaact gctacaaaaa
    17821 cggcctttta cctatcgtgt tgaccgaaga acaggttgac cggcttttca aagaagttga
    17881 agccaacgaa ggctatcagc tctccatcga ccttgccgaa caaaccctga ccacccctgg
    17941 cggcgaaaca ttcacattcg acattaccga acaccgcaaa cactgcctct taaacggctt
    18001 ggacgaaatc ggactgaccc tgcaacatgc cgatgaaatt cacgcctttg aagaaaaacg
    18061 ccgccaaagc cagccttggc tgtttaacgg ttaaaaccta tgccgtctga aggccgttca
    18121 gacggcattc ctgataacat ataattgttg cggctaatgt aaacagaggg gcgataaatt
    18181 gctttcatct tttaagcggg cttagcgaca ctctaaatta atgcaataat gcaactctcc
    18241 atttcaaata aatttttaga tttttaatat gcaacaaatt aaatttattg acttattttc
    18301 cggaatgagt ggcatcagga aaggattcga acaagcctgt cggaaacagt cggttgcttg
    18361 cgaatgtgtt tttacttcag aaatcaaacc ggcagctttg gaagtattga agcaaaacta
    18421 ccctgatgaa gtgccgtatg gagatataac gaaaattgaa acaggggata ttcccgattt
    18481 tgacatcctg ttggcaggct tcccttgtca ggctttttct ttcgccggaa aaagattagg
    18541 ctttgaagat acacggggaa cgcttttctt tgatgtggca aggattttaa aggcaaaaaa
    18601 accaaaaggt tttattttgg aaaatgtgga aggattggtg acacacgata gaaaagattc
    18661 gacacaaaaa atagggcgca ccctgaccgt tattttggaa accttggaag cattgggcta
    18721 ctatgtttct tggaaagttt taaatgcaaa agatttcggc attccccaaa acaggaagcg
    18781 catttatctg acaggcagtt tgaaatccaa acccgactta tctttcgaaa caagcccaag
    18841 tccgaaatta aaaaatattt tggaatcggg actgcctacc gaaagcagcc ctttcatcaa
    18901 aaaattgcta aaaaaatttc ccccgtccga actgtacgga aaatcagtaa aagacaaacg
    18961 gggagggaaa aacaatattc acagttggga tattgaatta aaaggcgcag taaccgaaga
    19021 agagaagcaa ttgttaaata tccttctaaa agaacggagg aaaaaaaatg ggcttcagaa
    19081 atcggcatag attggatgga tgggatgcct ttgacaaaag cgcaaatttc aactttctat
    19141 aaacacccca atctccaaaa tattttggac agcctgacag ataaaggcta tttggtttta
    19201 gagcatccga aacaaaaaat tggcgggcaa agaatcaaag atgaatccct gcccaaaggc
    19261 tacaatattg tttcaggtaa aaaatctttt gaaatcaata aaatattaga tccaaacgat
    19321 gttgcgccaa ccttggttgc aatggatatg gagcaccttt tcgtcgttga caacggcggt
    19381 ttgcgtacac ttaccggaaa agaagggttg cgcttattcg gctatccgga cgattattcg
    19441 tttgatattc ccaaaaaaga cagatgcgat ttattgggta ataccgttgt cgtccctgtg
    19501 attaaggcgg tatctgaaag acttctgcat actttataaa ccgacaggga taaaatgata
    19561 aaacttactg cacaacaaat atttgataag ttgctggatg aagaaaaaat cttatcggcc
    19621 aatggtcaaa ttagattttt cttaggcgat gtggatatta tcgtcaaaca aaaagatgtt
    19681 gtcggcaaca tcattcagga atggctcggc ggatgattga gaaaaaggga aattgaattt
    19741 gatgtttcaa ccaataccca aatgcctccc gatttctttt taaataaaaa agaccgcagc
    19801 agagaattgt tggaagtaaa ggcgttcaac cgaaataccg gcccgggttt tgatattgca
    19861 gattttaaaa tgtattctga tgaaatcatt cataagccct atatgctgga tgtagactat
    19921 ttaatattcg gttacgatat ggacgacaac ggcaatgtaa ccatcaagga tttatggctt
    19981 aaaaaagtat ggcaaattac gagaagcatg gatgggtggg caattaatct tcaagtcaaa
    20041 aaaggcgtgg tgcataaaat ccgcccgggt gtttggtaca gcataaataa aaagaatatg
    20101 cctatgtttg aatgcttgga agattttgtt tccgcaattg aagaaaccgt ttatcaaaac
    20161 ccggcaacac ggcataacgc atccttatgg aaaaagaaat ttgaggaagc ctataaaaaa
    20221 cactacaacc gatcgatttc catacctcgt tggcacgaaa ttgcacacaa atacaaaaag
    20281 aaataaccct tcaaccatca acccataagg aaacttgaaa tgaccaaaca tatcgccatc
    20341 ctccgaggtg acggcatcgg tcccgaaatc gtcgccgaaa ccgtccgcgt actcgacaaa
    20401 ctcatcgccc aaggtttgga tgccggctac gaatacgccc cattgggcgg cgaagcctat
    20461 gacgaatacg gtcatcctta tcccgaattt acgcaaaacc tctgccgcaa agccgatgcc
    20521 gtcctgcttg gtgcagtcgg ttctcctcaa tacgacaacc tcgaccgtcc gttgcgccct
    20581 gagcgcggcc tgttggcaat ccgtaaggat ttgaacctgt ttgccaattt gcgtcctgct
    20641 gttttatatc ccgaattagc caacgcctcc acgctgaagc ctgaaatcgt tgccggtttg
    20701 gatattttga ttgtgcgcga actcaccggc gacatctatt tcggcgaacc gcgcggcatc
    20761 cgcgttctgg aaaacggcga acgcgaaggc tacaacacca tgaaatacag cgaaagcgaa
    20821 atccgccgta ttgcccatgt tgccttccaa tccgcccaaa aacgcagcaa aaaagtctgt
    20881 tccgtaggca aagccaacgt tttggaaacc accgaattgt ggcgcgaaat ctttgaagaa
    20941 atcggcaaag agtaccctga tgtcgagctt tcccatatgt acgtcgacaa cgccgccatg
    21001 cagctcgtgc gtgcgcccaa acaattcgac gtcattgcca ccggcaacat cttcggcgac
    21061 attctctccg acgaagcctc catgctgacc ggctccatcg gtatgctgcc ttccgcctcg
    21121 ctggacgaaa acggcaaagg cctgtacgaa ccgtctcacg gctccgcccc cgacatcgcc
    21181 ggacaaaaca aagccaaccc gctggccacc atcctctcgc tcgcaatgtt gctgcgttac
    21241 agcctgaacg acgaagcgcg cgcgcaacaa gttgaaaacg ccgtccaaaa agtgctgcaa
    21301 caaggcttgc gtaccagcga catttacgaa gaaggcacaa aactcgtttc ctgctccgaa
    21361 atgggcgatg cgatactcgc cgccttgtaa aaaaacaaag cgcggatcac accgcgcttt
    21421 ttcatccgcc cttttccgcc cgccccgttc gtcaaccgcc tgcaaaccca ccgtttaccg
    21481 gcaggaaatg ccataaatcc ctgcctatgt taggataaac acctttatcg gcccacacaa
    21541 aggattatca tcatgaaaaa aatcatcttc gccgcactcg cagcggcagc cgttggcact
    21601 gcctccgccg ccacctacaa agtggacgaa tatcacgcca acgcccgttt cgccatcgac
    21661 catttcaaca ccagcaccaa cgtcggcggt ttttacggtc tgaccggttc cgtcgagttc
    21721 gaccaagcaa aacgcgacgg taaaatcgac atcaccatcc ccgttgccaa cctgcaaagc
    21781 ggttcgcaac actttaccga ccacctgaaa tcagccgaca tcttcgatgc cgcccaatat
    21841 ccggacatcc gctttgtttc caccaaattc aacttcaacg gcaaaaaact ggtttccgtt
    21901 gacggcaacc tgaccatgca cggcaaaacc gcccccgtca aactcaaagc cgaaaaattc
    21961 aactgctacc aaagcccgat ggcgaaaacc gaagtttgcg gcggcgactt cagcaccacc
    22021 atcgaccgca ccaaatgggg cgtggactac ctcgttaacg ttggtatgac caaaagcgtc
    22081 cgcatcgaca tccaaatcga ggcagccaaa caataaatct tgatgcgaat cagcacaaat
    22141 gccgtcttca tcaaaccgcc ccgccaacgg taagccgata tggcggagca caatccgccg
    22201 aaagatattt cagcggcagg cagggcttgc cggaaagtcc ggaaagtata gtggattaac
    22261 aaaaaccagt acggcgtt
//
LOCUS       DAWKOX010000011        22125 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.011, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000011 DAWKOX010000000
VERSION     DAWKOX010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22125
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.011"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            153..1058
                     /locus_tag="WJK78_000305"
     CDS             153..1058
                     /locus_tag="WJK78_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7597283.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGPYAI
                     AFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFNERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFA
                     SGLVSGLMLALSMVFVRKTHEIEPVALFPSMMILSLGGAVSLVVPALLMDGGVLYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            1104..1253
                     /locus_tag="WJK78_000306"
     CDS             1104..1253
                     /locus_tag="WJK78_000306"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597284.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="WJK78_000307"
     CDS             complement(1472..2491)
                     /gene="lepB"
                     /locus_tag="WJK78_000307"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ7597285.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFAAVFLIFVVLCGTAWAVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHNTDMFRSDLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRS
                     GTAIR"
     gene            complement(2636..4429)
                     /gene="lepA"
                     /locus_tag="WJK78_000308"
     CDS             complement(2636..4429)
                     /gene="lepA"
                     /locus_tag="WJK78_000308"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ7597286.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKNGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(4571..5272)
                     /locus_tag="WJK78_000309"
     CDS             complement(4571..5272)
                     /locus_tag="WJK78_000309"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ7597287.1"
                     /translation="MSLKTVAVIGAMEQEIKLLREMMENIKAVSFGRFSAYEGELVGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVIGTETAHHD
                     VDVTAFGYVWGQVPQLPARFASDGILIEAAKRAARTFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AANSAKMVAEIVKSL"
     gene            5458..6570
                     /locus_tag="WJK78_000310"
     CDS             5458..6570
                     /locus_tag="WJK78_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ7597288.1"
                     /translation="MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            6604..7581
                     /locus_tag="WJK78_000311"
     CDS             6604..7581
                     /locus_tag="WJK78_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ7597289.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHEEALAYLRERGVAEPEERLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRLRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            7585..7935
                     /locus_tag="WJK78_000312"
     CDS             7585..7935
                     /locus_tag="WJK78_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilZ"
                     /protein_id="HEZ7597290.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            7940..8719
                     /locus_tag="WJK78_000313"
     CDS             7940..8719
                     /locus_tag="WJK78_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ7597291.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAASPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRTV"
     gene            8745..8959
                     /locus_tag="WJK78_000314"
                     /pseudo
     CDS             8745..8959
                     /locus_tag="WJK78_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
     gene            9060..9371
                     /gene="grxD"
                     /locus_tag="WJK78_000315"
     CDS             9060..9371
                     /gene="grxD"
                     /locus_tag="WJK78_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ7597292.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            9477..10103
                     /gene="upp"
                     /locus_tag="WJK78_000316"
     CDS             9477..10103
                     /gene="upp"
                     /locus_tag="WJK78_000316"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ7597293.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            10126..10446
                     /locus_tag="WJK78_000317"
     CDS             10126..10446
                     /locus_tag="WJK78_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ7597294.1"
                     /translation="MNFQDYLATFSSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            10697..11116
                     /locus_tag="WJK78_000318"
     CDS             10697..11116
                     /locus_tag="WJK78_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597295.1"
                     /translation="MKKMFLSAVLLLSAATRTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRWATMKFQNGEFMYTIWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPKTAQANFNDDDFS"
     gene            11137..11898
                     /locus_tag="WJK78_000319"
     CDS             11137..11898
                     /locus_tag="WJK78_000319"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ7597296.1"
                     /translation="METAKPVMLIVRPSGRAAEDVETCLNAGWRAEVLSPVEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKAQIAVGQGSRRALERCLVRTV
                     IAPDDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            11913..13247
                     /locus_tag="WJK78_000320"
     CDS             11913..13247
                     /locus_tag="WJK78_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ7597297.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGNNALATCALVLAALGLGASGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVSGLPLILDGVLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNSEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            13244..14461
                     /locus_tag="WJK78_000321"
     CDS             13244..14461
                     /locus_tag="WJK78_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ7597298.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            14536..15600
                     /locus_tag="WJK78_000322"
     CDS             14536..15600
                     /locus_tag="WJK78_000322"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ7597299.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTGLATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEADIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            complement(15588..15749)
                     /locus_tag="WJK78_000323"
     CDS             complement(15588..15749)
                     /locus_tag="WJK78_000323"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597300.1"
                     /translation="MPSEIGTVGITPIRQHRRRHVLSIHGGYCRIALFFHPSASDGIS
                     GGFLPAYPP"
     gene            15777..17156
                     /gene="radA"
                     /locus_tag="WJK78_000324"
     CDS             15777..17156
                     /gene="radA"
                     /locus_tag="WJK78_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ7597301.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSTVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPLPEKMVAF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(17432..17911)
                     /locus_tag="WJK78_000325"
     CDS             complement(17432..17911)
                     /locus_tag="WJK78_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ7597302.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTKTDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(18036..18395)
                     /locus_tag="WJK78_000326"
     CDS             complement(18036..18395)
                     /locus_tag="WJK78_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ7597303.1"
                     /translation="MNIKHLITTALIASAAFAAQAAPQKPLSAAQTAQHPVVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(18434..22048)
                     /gene="recB"
                     /locus_tag="WJK78_000327"
     CDS             complement(18434..22048)
                     /gene="recB"
                     /locus_tag="WJK78_000327"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ7597304.1"
                     /translation="MSAPIQAFDSLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAELGDGALSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIEYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAECRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPHRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNGGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAEISVAAMPSETPTAS
                     DGISIHNFPKGTQAGLCLHEILEDFKFGQAAAGQETLITDKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYGLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPEGNICVIDYKSNHLGADASAYTRQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         4996 a         5740 c         6275 g         5114 t
ORIGIN      
        1 gggttttatc tggcaggacg gttttttgcc ccaacggaaa atagtcggcc tgcccgtaaa
       61 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
      121 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
      181 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
      241 gcagtctgat tgtcaggtcc gtccccgtcg gcccgtatgc aatcgcattt tggcggttgc
      301 tgatttcggt gttcgtattt tggtttttgg cacggttttt cgggcaaaaa ttcccaaaaa
      361 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt cctcgctttc gatttggcgt
      421 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
      481 aaatcttttt cttgtcggca atcggtgttt tcttttttaa cgaacgtttg agcgggctga
      541 aaaaggcagg cttaatatcg gcagttgccg gcgtggcgat gattgccggt gcggaattcg
      601 gctacaacgg taatgcggtt tggggattcg ccagcggttt ggtatcggga ctgatgctcg
      661 ccctgtcgat ggtgttcgtc cgcaaaaccc atgaaatcga gccggtggcg cttttccctt
      721 caatgatgat tttgagtttg ggcggcgcgg tatcgctggt tgttccggca ttgctgatgg
      781 atggcggcgt gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
      841 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
      901 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
      961 ggttgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
     1021 tttacctcgg ttcgctgaaa cagcagtccg agccttgact ccgtccggca tcagattttc
     1081 tgccgtggca aacctgcgta cgattgaact ggcaggcagt caaaaccggc aagaccaaac
     1141 acgccagcaa cggcgcggag cggaaaatgc cgtctgaagc cctttcagac ggcatcgggg
     1201 cgggcagaat caaaaaagcc gcctccgctg gaatggcaat gcaactaaaa taatgtccgt
     1261 atttccatat gccgcccaca ccgtcagtcg gacgaaatgc cctttattca atgggatggg
     1321 tttccacaca aacggaaata tagtggatta aatttaatcc actatattat ccccgaggct
     1381 gccggcaggg aaacaaggcg tttgatgata aaaatgccgt ctgaaacagg gttcggatgg
     1441 catttttgat gttccggcgt aattttccgg cctaacggat tgccgtaccg gacctgccga
     1501 aatcgccgaa gttcatcaaa atgaacattg ccttgccgac aaccagcttg tcatccacaa
     1561 atccccagta gcgcgaatcg gcactgttgt cgcggttgtc gcccatagcg aaatagcgtc
     1621 cttcgggaac tttgcacacg aaaccgctgc cgtcgtcggc atattggcag tgttccaaac
     1681 cgctttgctc tatggaatat ccgttttcag acataatatc ggaggtatat ttgcccaata
     1741 cgggcaggga aacggcaggc tgtccttctt ttttcagaat attgaaggat ttgccgtcca
     1801 gatcgctgcg gaacatatcc gtgttgtgga tttcggaagg gtcggtgtcg tcgggataac
     1861 ggtatgtgcc gttaggaata tcggaagtgg gtttgccatt taccgtcaaa atcttatccc
     1921 gatattcgac cacatcgccc ggaatgccga caatacgctt gatgtaggtc atctccggct
     1981 gcagaggata attaaaaaca acgacatcgc ctcgttcgat tttgcctgta ggaataaata
     2041 tattgtttaa aacgggtacg cgcagaccgt aggaaaattt gccgaccaaa atgaaatcgc
     2101 ccttaatcag gcccgggcgc atcgagctgg acgggatttg gaacggttcg gcaataaacg
     2161 accggatgag gaacaatacc aaaacggtag ggaagaaact gccgaaataa tcgccgaagt
     2221 ggctgctttc cgagatttcg ggatgagtct tcaggcggta tttgtatacc gcccaagccg
     2281 taccgcacaa tacaacgaaa atcaggaaaa cggcggcaaa gctcataaac agggacaaag
     2341 cggcaaacac gccgaccgcc gtcaggatat aggcgtattc gaggccggaa ctccattcac
     2401 cgttttcctg ccgcttcttg tcgcttttga aataaaggat gatgccggca agcagcgcgg
     2461 cagccgcgcc cgacattagc attgtgttca ttgttgttcc tcaacggtta aaaacccgcc
     2521 cggccgtgca accgttttaa ggcggcaaat tgcaaaattt gtttgcgggc gcgtgcccct
     2581 gaaatcaggg cggtttgaga ggtgttcccg acgcgccgcc ctatgtgccg aaatattatt
     2641 tgtcgctcac ctgcaaaatc gccaagaacg cgctttgcgg gatttccaca ttgcccactt
     2701 gtttcatacg gcgtttacct gccttttgtt tttcaagcag ttttttctta cgcgtaatat
     2761 cgccgccgta acatttcgcc aagacgtttt tacgcagtgc tttgacgttt tcgcgggcga
     2821 taatctggct gccgatggcg gcttggacgg caatgtcgaa catttggcgc ggaatcagct
     2881 cgcgcatttt cgatgccagc tcgcggcctc ggtgaaccgc gctttgacgg tgcacaatca
     2941 ggcttaaggc atcgactttt tcgccgttga ccatgatatc cagcttaatc aaatcagacg
     3001 gttggaactc tttgaaatgg tagtccaacg aagcataacc gcgcgaagtg gatttgagtt
     3061 tgtcgaagaa gtccatgacg acttcgttca tgggcaaatc gtaagtcagc atgacttggc
     3121 ggcccatata ttgcatattg acctgaacgc cgcgcttttg gttacacaaa gtcatgacgt
     3181 tgccgacgta ttcctgcggc acgaggatgg tcgcggtaat aatcggctcg agtatggttt
     3241 cgatgctgcc gatgtcgggc agtttggacg ggttttcaac ttcgattttc tcaccgtttt
     3301 tcaacacgac ttcgtaaacc accgtcggcg cggtggtaat caagtccatg tcgaactcgc
     3361 gctccaaacg ttcctgcacg atttccaagt gcagcagacc caagaagccg caacggaagc
     3421 cgaagcccaa tgcctgggaa acttcaggct cgaatttcaa cgaagcgtcg ttaagctgca
     3481 atttttccaa agcgtcgcgc aaggcttcgt agtcgtggct ttccacggga taaagtccgg
     3541 cgaatacttg gctttgtact tcttggaagc cgggcagcgg ctcagtggca gggttggcaa
     3601 ccagtgtaac cgtatcgcca actttcgcct gacccaattc ttttacgcca gtaatcaaaa
     3661 agcccacttc gccggctttg agttcttgtt tttgaactga ttttggtgtg aatacgccca
     3721 gctgctcgac ctgcgtttcc gccttggtgc tcataaagcg cactttgtct ttcagtttga
     3781 tggtgccgtt tttcactcga atcagcatga ccacgccgac atagttgtca aaccacgaat
     3841 cgacgatcac ggcttgcagc ggcgcgtttt cgtcgccggt cggcgcaggg attttggcaa
     3901 cgatttcttc taaaacgtct tccacgccga tgccgctttt ggcggaacat tgcaccgcac
     3961 cgacggcatc gatgccgata atgtcttcga tttcttgttc cacgcgttcg gggtcggcgg
     4021 cgggcaggtc gattttgttt aaaacaggca caacctccac gcccaaatca atcgcggtat
     4081 agcagttcgc cacagtttgc gcttccacgc cctgcgacgc gtcaacgacc aaaagcgcgc
     4141 cttcgcaggc agagagcgaa cgagagactt cgtaagagaa gtcgacgtgt cccggcgtgt
     4201 caatcaggtt gagttgatac acctgcccgt cgcgtgcttt atagttgagc gcggcggttt
     4261 gcgctttaat ggtaatgccg cgctcttttt cgatgtccat ggaatcgagt acctgcgtac
     4321 tcatttcgcg caaatccaaa ccgccgcaat attggatgaa gcggtcggca agcgtcgatt
     4381 tgccgtggtc gatgtgggca atgatggaga aatttcggat atttttcatt gagttgtttt
     4441 taatgctgaa cggtaggttt tagaaatgcc gtctgaacaa acagcggtac gtccaaatat
     4501 cgggcgcaac gtggaaatag cccgatattc taacggaaaa ccgctgtttt ggcatgattt
     4561 gataaaggtt ttataaagat ttgacgattt ctgccaccat ttttgcggaa tttgccgccg
     4621 ccgttttcaa gaactcgtca aagctgatgt ctgccttttc gtctgccgaa tcggaaaccg
     4681 cgcggatgat gacgaaaggc gtttccaact gatgacaggt ttgggcgatt gccgccgctt
     4741 ccatttctac cgccttaact tcggggaagt gcttgcggat ttccgccacg ccttcgctgc
     4801 tgtggacgaa gcggtcgccg ctgacaatca ggccttgttc taccgccgcg ccttcaaacg
     4861 tccgcgccgc ccgttttgcc gcctcaatca aaatgccgtc tgaagcaaac cttgccggca
     4921 gttgcggcac ttgtccccaa acatagccga atgcggttac gtcgacatcg tggtgtgcgg
     4981 tttccgtacc gatgactacg tcgccgactt tcaaaccctt gcccaaaccg cccgcgctgc
     5041 cggtgttgat gacgcagtcc ggtgcgaatt gatggataag ccaagccgtt gcaaccgccg
     5101 cgttgacctt gccgatgccg ctcaatgcaa gcaccatgcg ttttcccacc aattcgcctt
     5161 cataggcgga aaatctgccg aaagagacgg ctttgatatt ttccatcatc tcgcgcaaaa
     5221 gcttgatttc ttgttccatt gcgccgataa cggctactgt tttcaaagac atattgctga
     5281 cctgttgtga atttcggata gaatgccgga ttatacacgc taacacggca ggattgagtg
     5341 ggggcggttt gtccgtgccg tctgaaacgg tttcagacgg cacggcgggt ttttggtaga
     5401 atgggaaggt acagattgtt tgaagattag gggacgagga tgtttaccga tgaaaatatg
     5461 accgcaaagg aagaactgtt cgcatggctg cgccatatga acaaaaacaa aggttccgac
     5521 ctgtttgtga cgacccattt cccgcccgca atgaagctgg acggcaaaat cacccgcatc
     5581 acggacgaac cgctgacggc ggaaaaatgt atggaaatcg ccttttcgat tatgagtgcg
     5641 aagcaggcgg aagaattttc atcgaccaac gagtgcaact tcgccatcag cctgccggac
     5701 accagccgct tccgcgtcaa tgcgatgata cagcgcggcg cgacggcgtt ggtattccgt
     5761 gcgattacca gcaagattcc caagtttgaa agcctgaacc tgccgccggt cttgaaggat
     5821 gtcgcgctga aaaaacgcgg gctggttatt tttgtcggcg gcaccggctc gggcaaatcg
     5881 acttcgcttg cctcgcttat cgattaccgc aatgaaaatt cgttcggaca catcatcacc
     5941 atcgaagacc cgatcgagtt tgtccacgaa cacaaaaact gcatcatcac ccagcgcgag
     6001 gtcggcgtgg atacggaaaa ctggatggcg gcgttgaaaa acacgctgcg tcaggcgccg
     6061 gatgtcatcc ttatcggcga aatccgcgac cgcgaaacaa tggactacgc cattgccttt
     6121 gccgaaacgg ggcatttgtg tatggcgacg ctgcacgcca acagcaccaa tcaggcactc
     6181 gaccgcatca tcaacttttt ccccgaggag cggcgcgaac aattgctgac ggatttgtcg
     6241 ctcaaccttc aggcgtttat ttcgcaacgc ctcgttccgc gagacggcgg caagggcagg
     6301 gtggcggcag tcgaggtgct gctcaattcg cccctgattt cggagttgat tcacaacggc
     6361 aacatccatg aaatcaaaga agtgatgaaa aaatccacta ccctgggtat gcagaccttc
     6421 gatcaacacc tttaccaatt gtatgaaaaa ggcgatattt ccctgcaaga agcattgaaa
     6481 aatgccgatt ccgcacacga tttgcgtttg gcggtacagt tgcgcagccg ccgcgcgcaa
     6541 agttccagcc ccgatttgga actgctctga tggcggtatg gatttccgga cggatggttt
     6601 gaaatgattt atccgtggca taatgagcaa tggcggcaga ttgcggaaca ttgggagcgt
     6661 cgtcccaatg catggctgtt tgccggcaaa aaagatacgg ggaaaactac atttgcccgc
     6721 tttgcggcga aggcactgtt gtgcgaaacc cctgcaccgg gctgcaaacc ctgtggcgaa
     6781 tgtatgtcct gccatctgtt tggacaggga agccatcccg atttttacga aatcaccccc
     6841 ttgtcggacg aacccgaaaa cggacgcaaa ctgttgcaga tcaaaatcga tgccgtcagg
     6901 gaaatcatcg ataatgtgta cctgacttcg gtacggggcg gtttgcgcgt gattctgatt
     6961 catcctgcgg aaagtatgaa tgtccaagcc gccaacagtt tgttgaaagt gttggaagag
     7021 ccgccgccac aagtggtctt tttgctggtc agccacgcgg cggacaaggt tttaccgacc
     7081 attaaaagcc gctgccggaa gatggttttg cccgcgcctt cccatgaaga ggcattggca
     7141 tatctgcgtg aaaggggtgt ggcggaacct gaggaacgtc tggctttcca ttccggagcg
     7201 ccgctgtttg atgaggcgga cggtgtccgt gcgttgcgga ttaaactgtt ggatattttg
     7261 gcagaaccaa ggttgttgaa gattttggat tacgccgcgc ttttcgataa ggagaaactt
     7321 ccgctcgacg tatttgtcgg gtggatgcag aaatggctgg tcgatttggg attgtgcctg
     7381 caacacatga aacccgtcta ttatcccgct tatgaagaca ggctgcttca gacggcatcc
     7441 ggtttccgcc tgcgcaatgt atttgcggcg gaggatatgc tcaaacagct tgccccctac
     7501 gggtttcata ctttaaatgt caaaatgcag atcgagcatc tgctcatcaa ctatttggaa
     7561 ttgaagaaag agaacgggtg aattatgtca gacggacaaa atattccggc aaaaatgatg
     7621 tcgttgcagc tgaaagacat gaatctgctg tacagctcct acatgccgtt tttggaacac
     7681 ggcggtctgt ttgtgcagac caacgacgta ttttccatcg gggacgatat tctgcttgcc
     7741 gtagaaatcc tcaacttccc caaactgttc ctgccgacca aagtcgcctg gatcaatcct
     7801 gcgcgtactt cctccaaacc caaaggggtg gggctggcat tcacaaaaca cgaaaactgc
     7861 ctgaaagtca aagaccagat cgaagtcgaa ctgggcaaca caatcggcgg cagcagacct
     7921 acgtttacca tgtaacgcca tgcatatcat cgattcgcac tgccacctca attttgaagg
     7981 tttgaaagaa cgcctgcccg aagttttgtc caacatggaa gcaaacggcg tggggcaggc
     8041 gctcgccatc agcgtcagca gggaaagttt tgccgaagta tccgctatcg ccgaagttta
     8101 tgaacatatt tactgcacaa taggcgtaca tcccgacagc aaggaagccg aagaattttc
     8161 tattgcggaa atggttgccg cagccgcctc gccgaaagtg gtcggcattg gcgagacggg
     8221 tttggattat tactggtgca aaggcgattt gtcctggcaa cacaaacgct ttgcagacca
     8281 catcgaagca gccaatcaaa ccggactgcc cgttatcgtc catacgcgtg atgcggcggc
     8341 ggacaccttg tctatcctga aagaatgccg ggttaattcg ggcgttatcc actgtttttc
     8401 cgaagacatc ggttttgccc gtgcagcaat ggatttgggg ctttatattt ctttctcggg
     8461 aatcgttacc tttaaaaacg cacccttggt tcaggaggcg gcaaaatatg tgccggacga
     8521 ccgcattttg gtggaaaccg atgcgccgtt cctcgccccc gttcccaaac gaggcaggca
     8581 gaacgaaccg gcttttgtgc gccataccgc cgaacatatc gccaaattgc ggaaccaaac
     8641 attggaacag gttgcggcat acacgacgga aaacttttac cggctgttta aaaaagtacc
     8701 cgatatgcgg accgtctgac cctgtgccga cgataaggaa aaccatgaag gcaattcatc
     8761 cgtatgtatg tccgcgctgc tgccggctgc ctgccaacac gtttcggaca ggcatggcaa
     8821 attccgcttc caaattctgc attgccaaag gcggcagacg ggaagtaaaa aagacgaaag
     8881 cggcggcgga tatgccctgt gccatttgcc ggacagcagg attgtcgagg agtgggaata
     8941 tttccgttca caacattgat actgcgcgat atacggcaaa tattgtggga agtttccgct
     9001 tttgcgtata atgcgtccta cctgacaaat tttgtcaact ttatcaaaag gaataagcga
     9061 tggcttccat ccacgaccaa attaaagaag tagtaacgac acaccgcgtc gtattgttta
     9121 tgaaaggtac gaagcagttt ccgcaatgcg gtttctcttc ccgcgccgtg caaatcctga
     9181 acgcggcggg ctgcaccgat tacgttaccg tcaacgtatt ggaaaatccc gaagtacgcc
     9241 aaggcattaa ggaatacagc gactggccga ccatccccca actttatgtg aacggcgagt
     9301 ttgtcggcgg ttcggacatc ctgatggaaa tgtatgaggc aggcgagctg caagagctgc
     9361 tgaaagcctg atggattcgg caatgccgtc tgaacgtgtt tcagacggca ttttcttttc
     9421 cggcaaatca aaaaaaagta taatggcgcg tctcaaaatc acactggaac accgcgatga
     9481 acgttaatgt tatcaaccat ccgctcgtcc gccacaaatt aaccctgatg agggaggcgg
     9541 attgcagcac ctacaaattc cggacgcttg ccatcgagct ggcgcgcctg atggcatacg
     9601 aggcaagccg tgattttgaa atcgaaaaat accttatcga cggatggtgc ggtcagattg
     9661 aaggcgatcg catcaagggc aaaacattga ccgtcgttcc catcctgcgt gcaggtttgg
     9721 gtatgcttga cggcgtactc gacctgattc cgactgccaa aatcagcgta gtcggactgc
     9781 agcgcgacga ggaaacgctg aaacccgttt cctacttcga gaaattcgtg gacagcatgg
     9841 acgaacgtcc tgccctgatt atcgacccga tgctggcgac gggcggttcg atggttgcca
     9901 ccatcgacct tttgaaagcc aagggctgca aaaacatcaa ggcactggtg ctggttgccg
     9961 cgcccgaggg tgtgaaggcg gtcaacgacg cgcaccccga cgttacgatt tacaccgccg
    10021 cgctcgacag ccacttgaac gagaacggct acatcatccc cggcttgggc gatgcgggcg
    10081 acaagatttt cggcacgcgc taactgactg attttcggat ttgatatgaa tttccaagac
    10141 tatctcgcca cattttcttc aatcgaccat ctgggcggtt tggacgttca ggatgccgac
    10201 ggcaaaacgg ttcaccacat tcccgccgtt cagggtaagc tcggttcgct caagctgtac
    10261 aatgctttgg cagaacgttt tgacggaaaa ttggacaaag aagcggcaga acagggtttg
    10321 atatggtttg ccgaacacgt tgccgacgcg cgcgcccatc ccggcaagca tcccaatatc
    10381 gacctgcttg aaaaagttgt gcaaagcggc gaaaccttgc tgctcaagcc gcttgccgcg
    10441 caataatttt cgaccatgcc gtctgaaatc cgtttcagac ggcattttgt cggaaagaag
    10501 accgtaaaac gggcattttc ttttctattt caggatacgg gcaatgatgt ttcaacacac
    10561 aggacgacac ataaagtgtt gccctatgtg ttgccctaat ttggaagggg ttacacccct
    10621 ctcaaataac atctgatgct gctgccacga aggacggatg tccaaatggc ggagtttcaa
    10681 ccattaagga aatacgatga aaaaaatgtt cctttctgcc gtattgcttc tgtcggctgc
    10741 gacccgaacc gtgtgggcgg atacggtgtt ttcctgtaaa acggacaaca acaaatatat
    10801 agaagttcaa aaaatcaacc gcaatcttta cgaatattcg ttcggtagtg cggcaaaaaa
    10861 agaaattgcc atacgcaaca gcaaagctga cctgttgggg cgttccgaca ggtggcaagg
    10921 tatgggcagc ggtcgttggg caacgatgaa attccaaaac ggcgaattta tgtacaccat
    10981 atggacaggc ttcgattccg tgactcatac ggaaagcagc ggtgtcgttg tggagcgtag
    11041 gggcaaggaa gtcgcacggg tcggctgtac gccgaaaacc gcgcaggcga atttcaacga
    11101 tgacgatttt tcctagtaat cggggcggat aaggcgatgg aaacagcgaa acccgtcatg
    11161 ctgattgtcc gtccgtcggg cagggccgca gaagatgtcg aaacttgcct gaatgccggt
    11221 tggcgcgcgg aagtattgag tccggtcgaa atcgaagcag atgctgccgg actggaactt
    11281 ttgtccgaac aatatgcccg tgcggatgcc gtgttttggg tcagtccgac cgccgttgaa
    11341 accgccgtcc cgtaccttaa cctttcagac ggcataaagg cgcagattgc cgtagggcag
    11401 ggcagccgcc gcgcattgga acgctgtttg gtcagaacgg tcatcgcgcc tgatgacggc
    11461 aacgacagcg aggcggtttt gcgcctgccg gtttggaaca gtctgcccga aggtgcgcgc
    11521 gtattgtttg tgcgcggaca cggcgggcgg gattttttga tgaatgcctt gcaggagaaa
    11581 ggttttcgga cggaggtggc agaagtctat ttcagacggc ataaaccttt gaactttcaa
    11641 aatttccaaa ccgaaaatat tgccgccgcc tatattacgt cgaccgagct ggtgcgcttg
    11701 ctgttcgggc agcttccgcc gcaattttcc cgattcttca aatccttgct atactttacc
    11761 catcatccgc gcattgcgga ggcattgaag cgcgaaggcg tgtgttcggt cgaaaccgtc
    11821 cctacgctgg aagccgcgct ttcccattct tccatttccg tttcagacgg catggtcttt
    11881 cccggaacct caaattaata aggagcaaaa cggtgggcga acctgaaaac aaatcatccg
    11941 aacccgtacg cgagatacag gcatcaaaag aaatgccgtc tgaaacctct tccccacgca
    12001 aagaaaacga aacagaagta cacattcctg ccgctccttt tatcgtcaaa cagtccggca
    12061 acaacgcttt ggcaacctgc gccttggtat tggcggcatt gggtttgggc gcaagtggtt
    12121 ttttgtttgt ccaaggacag aatgtcttga aaaaccaaga gctggcattc aaccaaaaaa
    12181 tcgacaaagc cgccttgggc gagtcggaaa acgccgccct gctcaaagac aacctcaacc
    12241 ggcaagccgc catacaatca gaactcgacc gtttggacgg aaacgtcaaa gcaaacggcg
    12301 aacaaatctt ggaaatgcaa aaatcctatc gcgagttgac caaaggacgc gccgattggc
    12361 tggtggacga aaccgagacc atactcaatc tggcggcgca acagctggtg ttgaccggca
    12421 atatccaaac ggcagtcggc gtattggagc atatcgacag ccgcctgtcc cgtttcaatc
    12481 aggcagagct tctgccgatc aaacaggcgg tcagcagcga cttggcggaa ctgaaaaacc
    12541 gtccctatgt cgatatttcc ggcacggcat tgcgcctcga caggctggaa accgccgtat
    12601 ccggactgcc gctgattttg gacggcgtat tgaagccggg cgtacaggtg aagaacgaag
    12661 ccgcttctgc ttcatggtgg cagaacgtat gggaaaaatc cctcggcaca ttgaaggggc
    12721 tggtcgaaat ccgccgtttg gaaaacaacg atgccatgct gatttctccc gaacaggcat
    12781 attttgtgcg tgaaaacctg cgcctccgcc ttttggatgc gcggactgca ttaatgcagc
    12841 gcaacagcga agtctatcag ggcgatttga acaatgccga agccgccgtc agacagtatt
    12901 tcgatgccaa gtctcccgcc acgcagtcgt ggctgaaaga actggcggaa ttgaaggcgt
    12961 tggatgtgcg catgacggcg gatgacggtt tgaaaaacag cctaaatgcc gtccgcgcct
    13021 atcgcgacgg tacgcgcatg acggcggcgg aaaatcaaga agcagaacag gcggcttccg
    13081 aaccggcaaa cgaaaacaca gcttccgaac cggctgccgc atcggatgtg aagaccatag
    13141 aagcaccgtc cctgccttcg gaacgcaaac cggaacagcc tgcaaaaaaa cagcccgtac
    13201 cggaaaaggc agggcgttcg ccgtccgcta aaggagaacg cgcatgaaaa cggtagtctg
    13261 gattgtcgtc ctgtttgccg ccgccgtcgg gctggcattg gcttcgggca tttacaccgg
    13321 cgacgtgtat atcgtactcg gacagaccat gctcagaatc aacctgcacg cctttgtgtt
    13381 aggttcgctg attgccgtcg tggtgtggta tttcctgttt aaattcatta tcggcgtatt
    13441 caatatcccc gaaaagatgc agcgtttcgg ttcggcgcgt aaaggccgca aggccgcgct
    13501 tgccttgaac aaggcgggtt tggcgtattt tgaagggcgt tttgaaaagg cggaactaga
    13561 agcctcacgc gtgttggtca acaaagaggc cggagacaac cggactttgg cattgatgtt
    13621 gggcgcacat gccgccgggc agatggaaaa catcgagctg cgcgaccgtt atcttgcgga
    13681 aatcgccaaa ctgccggaaa agcagcagct ttcccgttat cttttgttgg cggaatcggc
    13741 gttgaaccgg cgcgattacg aagcggcgga agccaatctt catgcggcgg cgaagatgaa
    13801 tgccaacctt acgcgcctcg tgcgtctgca acttcgttac gctttcgaca ggggcgacgc
    13861 gttgcaggtt ctggcaaaaa ccgaaaaact ttccaaggcg ggcgcgttgg gcaaatcgga
    13921 aatggaacgg tatcaaaatt gggcataccg ccgccagctg gcggatgctg ccgatgccgc
    13981 cgctttgaaa acctgcctga agcggattcc cgacagcctc aaaaacgggg aattgagcgt
    14041 atcggttgcg gaaaagtacg aacgtttggg actgtatgcc gatgcggtca aatgggtcaa
    14101 acagcattat ccgcacaacc gccgccccga gcttttggaa gcctttgtcg aaagcgtgcg
    14161 ctttttgggc gaacgcgaac agcagaaagc catcgatttt gccgatgctt ggctgaaaga
    14221 acagcccgat aacgcgcttc tgctgatgta tctcggtcgg ctcgcctacg gccgcaaact
    14281 ttggggcaag gcaaaaggct accttgaagc gagcattgca ttaaagccga gtatttccgc
    14341 gcgtttggtt ctggcaaagg tttttgacga aaccggagaa ccgcagaagg cggaggcgca
    14401 gcgcaacttg gttttggcaa gcgttgccga ggaaaaccga ccttccgccg aaacccattg
    14461 aaaccttcag acggcatcgt tgaaatgccg tctgaaaacc atttcacttg acaaacagac
    14521 tgacagaaaa cccgtatgac tcttttaaaa aacgatacct tcctccgcgc cctgcttaaa
    14581 cagcccgtcg aatacacgcc gatttggatg atgcgccagg cggggcgtta tctgcccgaa
    14641 tacaaagcca cacgcgcgaa agcgggcagc ttcctcgatt tgtgcaaaaa caccggattg
    14701 gcgaccgaag ttaccatcca acctttggaa cgcttcgatt tggacgcggc gattttgttc
    14761 tccgacatcc tgaccgtccc agacgcaatg ggcttgggac tgtactttgc cgaaggcgaa
    14821 ggcccgaaat tcaaacgcgc cctgcaacac gaagccgata tcgccaagct gcacgttccc
    14881 gatatggaaa aactgcaata cgtctttgat gccgtcagct ccatccgtaa agcactggac
    14941 ggccgcgtac cgcttatcgg cttctccggc agcccgttca cgctcgcctg ttatatggtc
    15001 gaaggcggcg gcagcaaaga attccgcacc atcaaaacca tgatgtactc acgccccgat
    15061 ttgctgcaca aaatcctcga taccaacgcc caagccgtta ccgcctacct caacgcccaa
    15121 atcgacgcgg gcgcgcaggc ggtgcagatt ttcgacactt ggggcggcgt gttgagcgat
    15181 gcggcgttta aagaattcag cctcaaatac atccgccaga tcgtcgccgg actcaaacgc
    15241 gaaagcgaag gccgccgcgt acctgttatc gtatttgcca aaggcggcgg gctgtggctg
    15301 gaaagtatgg cccaaatcgg cgcagacgca ttgggcttgg actggacgtg taacatcggc
    15361 gaagcacgcc gccgcgtcgg caagcaagtc gccctgcaag gcaacttcga cccgttcgcc
    15421 ctcttcggta cgccggaatc catccgcacc gaggtcgcac gtatcctagc cgactacgga
    15481 cacggcagcg gccatgtctt caacctcgga cacggcatca accaacacgc cgaccccgaa
    15541 cacgccaaaa tcttagtcga taccgtacac gagctgtctc ggcagtatca cggcgggtaa
    15601 gccggcagga aaccgcccga tatgccgtct gaagccgagg gatggaaaaa taaggcaatg
    15661 cggcaatatc cgccgtgtat ggatagtaca tgacggcggc ggtgttgccg tattggcgta
    15721 atcccaaccg tccctatttc agacggcatt tttgttttca gatgcaggga aaaccgatgg
    15781 caaaaacgct taaaaccctt taccaatgca ccgaatgcgg cggcacttcc ccgaaatggc
    15841 agggcaaatg cccgcattgc ggcgagtgga acacgcttca ggaaagcctt gccgcgcccg
    15901 agccgaaaaa cgcccgcttc caatcttggg cggcggatac ctcgaccgtc cagtccctct
    15961 ccaccgtgac cgccaccgaa gtgccgcgca atccgaccgg catgggcgaa ctcgaccgcg
    16021 tattgggcgg cggtttggtc gatggtgcgg tcatcctgct cggcggcgac cccggcatcg
    16081 gcaaatctac gctgctgttg caaaccatcg ccaaaatggc gcaaagccgt aaagtgctat
    16141 acgtttccgg cgaagaatcc gcccaacaag tcgccctgcg cgcgcagcgt ttggaactgc
    16201 ccaccgaagg cgtgaacctg cttgccgaaa tccgcatgga agcgattcaa gcagcgttga
    16261 aacagcatca gcccgaagtc gtggttatcg attccatcca aaccatgtat tccgaccaaa
    16321 tcacttccgc ccccggttct gtgtcgcagg tgcgcgagtg tgccgcccaa ctgacgcgca
    16381 tggcgaaaca gatgggcatc gccatgatac tggtcggaca cgtgaccaaa gacggcgcga
    16441 ttgccggccc gcgcgtgctg gaacacatgg ttgataccgt gctgtatttc gagggcgacc
    16501 aacattccaa ctaccgcatg atacgcgcca tcaaaaaccg cttcggcgcg gcaaacgaac
    16561 tgggcgtgtt cgctatgacc gaaaacggtt tgaaaggcgt gtccaacccg tccgccatct
    16621 tccttgccag ctaccgcgac gacacgcccg gttcgtgcgt tttggttaca caggaaggca
    16681 gccgcccgct tttggtcgaa attcaggcat tggtcgatga cgcacacggc ttcaccccca
    16741 aacgcctcac cgtcggactg gaacaaaacc gccttgcgat gctgcttgcc gtattaaacc
    16801 gccacggcgg catcgcctgt ttcgatcagg atgtgttttt aaacgccgtc ggcggtgtga
    16861 aaatcggcga accggcggcg gatttggcgg tcatcctcgc gatgctttcc agcttccgca
    16921 accgcccgct gcccgaaaaa atggttgcat ttggagaaat cggtttgagc ggtgaagtcc
    16981 gccccgtcgc gcgcggacaa gagcggctca aggaagcgga aaagctcggc tttaaacgcg
    17041 ccatcgttcc caaagccaat atgccgcgca atgccaaaga gtttccgaac ctgaaaatct
    17101 acggcgtttc gagtttgcag gaagccattg atatttgccg cgacagcagg gaataaacgg
    17161 aaatgccgtc tgaaatcggg tttcagacgg catttggttt gtggcggatt gaaacaagaa
    17221 ggcataccgg cgacagataa gatttgcggc aaagttgcct gtgatgtggc aaaaacacac
    17281 acgcccgtca tccccgcaag ggtgggaatc tggagtcgtc cgtttctgca atgattgaaa
    17341 atcacggtaa cccaaccgat tggattcccg acttcgtggg aatgaggggc gtgtgcattt
    17401 gatttccatc cgccatatgt cggcgacggg cttattcgcc tacggttttt tgtatcagtt
    17461 tttcggcgtt tgccaaagtg tttgccactt cgtcaaaacc gatgcggctg ccggcgatga
    17521 gggcgcgcgt atcggtatag gcggcgcgta ctttgccgtc cgttttggta acgaggacgc
    17581 gtaggggcag ttgcagggcg aaggcggggt ctttgaccat cagcggcgtg ccggctttgg
    17641 gcgtgccgaa gacgatgact tttgccggct gcatcgttaa gccgtttcgg cgggcggctt
    17701 cctgatggtc gatgacggca aaaatgtcca tccctttgct ttttatggcg gtttcaaggc
    17761 ggctgacggt ttcgtcaaaa ctgtattttg aggtgagggt atgcgtggtc atagcggttt
    17821 cgttttgggt ttgcggttcg ctggcaggat gtgccgaagc ggttgaaatg cagagtgcgg
    17881 atgcggcaat cagggggagt atgtgtttca tcgtatttcc ttttcggttt gtttatcagg
    17941 cttcggacgg ggcggcgcgc gccgcgcccg atgttgcgcc gcgtgccgga acgccgtatg
    18001 ccgtctgaaa gcctgtcctt tcagacggca ttgcgtcatt tcatcccttt tttgagcagg
    18061 tcttcataac cgccgtgatt ggcaacattt gtataacctg cttttttcag ttcttgaagg
    18121 gcggcttcgg cacgccgtcc gctgcggcag tagaggttga ccggcgtgtc tttgtcgggc
    18181 gcggcttcgt gtatgcggcg gacgatttgg tcgacgggga tgttgaccgc gttgtgcaaa
    18241 tgcccttcgc taaattcctg ttcggaacgg acatcgatcc aaacgaccgg atgttgcgcg
    18301 gtttgggcgg cggatagggg tttttgcggg gctgcctgcg cggcaaaggc ggctgaggca
    18361 atgagtgcgg tggtaatcag gtgtttgata ttcatagggt tctcctgcgg ttgttgtccg
    18421 aaaggacggg aagttatttt atctgttcca aagcggcggc atctatgtcc caacgccaaa
    18481 cgccgccgcc tttgccatcc aatccgcgca aaaacaggta gcggacggaa acggcggcgg
    18541 gcggttgtcc gcgcagtttg aagtagcgtg cggcggcaac ggcgtaaatc agcgcctgaa
    18601 ggtaatagtg gtggtgcgcg acggcttcgt ccatcgcctg ccgcgtgtag gcggatgcgt
    18661 ccgcgccgag atggtttgat ttgtagtcga tgacgcagat atttccctcg gggtcttggc
    18721 agaccatgtc gataaagccg tttaaaaagc cgttgacggt gtggaagtct agcgtttcgg
    18781 cagcggcacg gcagacttcg ggcagcctga tgtcgtcgcg ggcaaaccaa tcgcgtagcc
    18841 gtttgaggcc gaagtcttcg gtgtggaggg taaagcccat ttcgggacag cggcactcgg
    18901 gcgggatgtc ggacaggccg tatgcccccg tcagcggcgt tttgcggcag gcttccgcca
    18961 tttcggcaac ggcgggcagc catatttctt caaatccgta ttttttcagc ttgtcggtga
    19021 tgagggtttc ctgtccggcg gctgcttgtc cgaatttgaa atcttcaaga atttcgtgca
    19081 ggcacagccc cgcctgcgtg cctttcggaa agttgtgtat cgatatgcca tctgaagccg
    19141 tcggcgtttc agacggcatc gcggctaccg agatttcggc ggcatccaag gacgggcagg
    19201 catcttcttc gccgccgtcg ggcgtttggg tatggcggct taaggcggta aagctggtgt
    19261 ggcggacaaa tcggaatctg cgttcgggaa tgctgtttgc ggcaaattcg gcggtttgac
    19321 cggcgttgcc gcgataggcg gcagggggcg gcgcatcttc tgtgaaggcg aaatttgtgc
    19381 cggaaggggc gttgtccgcc acgcgccgcc agttgcgttt gagcatcgcg atgccgtctt
    19441 tttcacacgc ataggcacgg cggacggttt cacggctgtc ttggggcgag ccttcaatca
    19501 ggtaggcgag ggggttgtcg gcagtattgg tggagtacgc ggcgtagatg ttgagctgtt
    19561 cctcggcacg cgtcagcgcg acataaagca ggcgcaggcg ttccgccatt tcttcatcgg
    19621 cgtattgttt ctgttcgtct tcggacagtt gcgcctttgc caacagttcg gttcggtttg
    19681 cgctttggtg gaggatttgc cagtcggacg gcccggtatc ttgcgcgtcc cacgcaaacg
    19741 ggcagtacac cagcggatac tgcaaacctt tcgaggcgtg catggtaacg attttgacca
    19801 aatcttcgtc gctttccaga cggatggcgc ggttgtcgcc gccgttgttg ccggccaggc
    19861 tgatttggtc gcgcagccat ttgtgcagcg cggcggggtt gcggttttgc gcgtcttcgg
    19921 cggcaagcag ttcgagcagt tggaaatagt tggtcaggct gcgcccgttg ttccggctta
    19981 agaggcgtgt ttcgatgccg tgtgtttggg aaaattgctg catggcggcg aaaatgccgt
    20041 attgattcca gttgtcgagc gcggttcggg cagattccgc ccaatgcaaa atctcgcttt
    20101 cgttttggtt gaagtcgtgc aattgctgcg cgtcataacc gaatatgccg cttgttagga
    20161 caaagcgcag cgttccggcg cggtgcggtt cgagccagaa gccgatgagt gcggacaggg
    20221 cggcggcttc gggcgaggcg aacacggatt cgcgcgaaag caggacgctt tgcacctgcc
    20281 gttttttcag ggcggcggaa accatcaccg cctcgttgtg cgtgcgtacc agcacggcaa
    20341 tatcgcccga ctgcaacggg cagcctttga aattcagacg gcattcggcg gcttcgttga
    20401 gcgcgtgggc gatttcgtcg gcgcaatagt cggcggcacg gcggcgcaaa acgtctttgt
    20461 tggctttttc attgtcgttt tcgtgcagcc aacgaacctg tacggcagga cgtttgggcg
    20521 acaatctgct ttcggcacgc gccgcaccga cttccgaata gccgatgttt tccaaaacga
    20581 acgggcgttc tttgaggcgg aacagcgcgc ctatgctgcc gataagcgcg gcgtggctgc
    20641 ggtagttggt ggcgagcgtg tagcggtgcc gcgcgtcttc cgccgcctga aggtaggcgt
    20701 aaatgtccgc tccgcgaaag ctgtaaatcg cctgtttggg atcgccgacg aggaacagcg
    20761 gtcggttttg ggcgatgaag attttttgga agatttcgta ttgcagcggg tcggtgtctt
    20821 ggaactcgtc gatcagcgcg gtttcccagt tttcggcaac ggcgcgggcg agggtttcgg
    20881 cgtgcggatt gtcggtcagc gcggtgtgga catcgagcag caggtcgtcg aaaccgcgtt
    20941 cgcggcgcga ttttttcatc tcggcaaggc tgcggttgag gtattcgatt aaatccagtt
    21001 gcagccggat cattgttgct tcttccgctt cttcgagtgc gttcaaatcg cgcccgaagt
    21061 ctgccagttt ctgcaattcg gcaaatactg ccgcatcggg cgttttgcct tttttcagtc
    21121 cggcttcgag tttgtcggat gcaagtttca agagtctgtc gtgtgtgtct ttgtccagaa
    21181 agggcagttg tccggcggcg gatttttgtg ccagttcttt aaaaaggttg ccgaagctgt
    21241 ttttgcggta actgttgccg ttgaggtcgg gatggatgcg ccaaaagccg gcttccagct
    21301 cgggcagcag gcggcagacg gtttgccatg aggtttcggc gttgcgctgc gcctgtttca
    21361 aatccgcctg cggacggcgg aaattcaggt acgggcggga caggtaggcg cggatttggg
    21421 caaggacggt ttgcggcaca gctttgcgtt taaacgccaa tgcggcaagc accggatcat
    21481 tgctgacgcg ttcccgccaa aaatcttgcg ccgggataag caggcggtcg ccgtcttctt
    21541 cggtcagttc gacatcgaac ggtgcttggc acaagaaggc gtagtcgcgc aggatgcgct
    21601 ggcagaagcc gtggatggtg tagatggcgg cgttgtcgaa ttgcccgatg gcggccttga
    21661 ggcggacaat cagacgcgtc cggccctctt tttgcaaagc ctgttttaag agtgcgggca
    21721 ggaaggtgtc gcctttgtgg tgttccgcac aataggcggc gatgccgtct gaaagcgcgc
    21781 cgtctccaag ttcggcaatt tctttgcttt ctaaaacctg caacacatcg tccaaacgtg
    21841 cgcgcaggcg tgttttcaac tcggcggtgg cggctttggt gaaggtaacg accaatacgc
    21901 gctcgacgtt tttttgttct aatacgatca ggcgcgtaaa cagggcggca atgccgtagg
    21961 ttttgccggt gccggcagag gcctcaatca ggttggtgcc ggcaatgggg acggttagcg
    22021 agtcgaatgc ttggatgggt gcagacatag tgcgcgctcg gaaaacggtt ggacggtata
    22081 gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagt
//
LOCUS       DAWKOX010000012        21787 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.012, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000012 DAWKOX010000000
VERSION     DAWKOX010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21787
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.012"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            54..1094
                     /gene="murB"
                     /locus_tag="WJK78_000328"
     CDS             54..1094
                     /gene="murB"
                     /locus_tag="WJK78_000328"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ7597305.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTEIFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVIGAEKAAALLEQHPDMPHYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDKQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            1106..1756
                     /locus_tag="WJK78_000329"
     CDS             1106..1756
                     /locus_tag="WJK78_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ7597306.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLAYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            1811..2578
                     /locus_tag="WJK78_000330"
     CDS             1811..2578
                     /locus_tag="WJK78_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ7597307.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGFPAPDFAPDDSMGKIIRTVCDNS"
     gene            2638..3204
                     /locus_tag="WJK78_000331"
     CDS             2638..3204
                     /locus_tag="WJK78_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ7597308.1"
                     /translation="MSALLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            3224..4114
                     /locus_tag="WJK78_000332"
     CDS             3224..4114
                     /locus_tag="WJK78_000332"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ7597309.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            4139..4897
                     /locus_tag="WJK78_000333"
     CDS             4139..4897
                     /locus_tag="WJK78_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ7597310.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITSE
                     NRWESDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(4952..5617)
                     /locus_tag="WJK78_000334"
     CDS             complement(4952..5617)
                     /locus_tag="WJK78_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ7597311.1"
                     /translation="MTVLDREQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(5817..6713)
                     /locus_tag="WJK78_000335"
     CDS             complement(5817..6713)
                     /locus_tag="WJK78_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ7597312.1"
                     /translation="MQLLKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVARLTMTVYLPAEQKGTHMS
                     RFVALMEQHSEALDFAQLHRLTAEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLD
                     YDVCLTGEMKDGAYGYSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            6782..7939
                     /locus_tag="WJK78_000336"
     CDS             6782..7939
                     /locus_tag="WJK78_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ7597313.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFTLHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKATGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAIAGPMDCWLVLRGIKTLALRMEAHCKNALEIARRLEDHPAIEKVFH
                     PGLPSHEHYELAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(8002..9003)
                     /gene="hemB"
                     /locus_tag="WJK78_000337"
     CDS             complement(8002..9003)
                     /gene="hemB"
                     /locus_tag="WJK78_000337"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ7597314.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAEEAYNPE
                     GLVPAAVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALNEVALDIREGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAIANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(9186..9470)
                     /gene="yhbY"
                     /locus_tag="WJK78_000338"
     CDS             complement(9186..9470)
                     /gene="yhbY"
                     /locus_tag="WJK78_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ7597315.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            9580..10200
                     /locus_tag="WJK78_000339"
     CDS             9580..10200
                     /locus_tag="WJK78_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ7597316.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINDKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGSSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            10264..12231
                     /gene="ftsH"
                     /locus_tag="WJK78_000340"
     CDS             10264..12231
                     /gene="ftsH"
                     /locus_tag="WJK78_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ7597317.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDKSVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            12452..12883
                     /locus_tag="WJK78_000341"
     CDS             12452..12883
                     /locus_tag="WJK78_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ7597318.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            12876..13154
                     /locus_tag="WJK78_000342"
     CDS             12876..13154
                     /locus_tag="WJK78_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ7597319.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            13207..13785
                     /gene="pth"
                     /locus_tag="WJK78_000343"
     CDS             13207..13785
                     /gene="pth"
                     /locus_tag="WJK78_000343"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ7597320.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            13846..14052
                     /locus_tag="WJK78_000344"
     CDS             13846..14052
                     /locus_tag="WJK78_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ7597321.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            14049..14411
                     /locus_tag="WJK78_000345"
     CDS             14049..14411
                     /locus_tag="WJK78_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ7597322.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            14642..16057
                     /locus_tag="WJK78_000346"
     CDS             14642..16057
                     /locus_tag="WJK78_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEZ7597323.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            16176..16685
                     /locus_tag="WJK78_000347"
     CDS             16176..16685
                     /locus_tag="WJK78_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ7597324.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKNGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            16852..18234
                     /locus_tag="WJK78_000348"
     CDS             16852..18234
                     /locus_tag="WJK78_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ7597325.1"
                     /translation="MASIARDIFKAYDIRGIVGKTLTDEAAYLIGKAIAAKAAEKGIT
                     RIALGRDGRLSGPELMEHIRRGFTDSGINVLNVGMVATPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLSIIEKDGFAAAGKQGSVTEKDISGEYLKHI
                     TGHIRLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGTFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSAMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(18254..19009)
                     /locus_tag="WJK78_000349"
     CDS             complement(18254..19009)
                     /locus_tag="WJK78_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ7597326.1"
                     /translation="MIKIRNIHKTFGENTILRGINLDVCKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(19019..19735)
                     /locus_tag="WJK78_000350"
     CDS             complement(19019..19735)
                     /locus_tag="WJK78_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ7597327.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(19725..20552)
                     /locus_tag="WJK78_000351"
     CDS             complement(19725..20552)
                     /locus_tag="WJK78_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7597328.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            20837..21745
                     /locus_tag="WJK78_000352"
     CDS             20837..21745
                     /locus_tag="WJK78_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ7597329.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKTRFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNTAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLQHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT         5368 a         6426 c         5369 g         4624 t
ORIGIN      
        1 aaacgatggg ctgaagcccg ccactggcaa tactcatttt aaagttcaaa cccatgcaac
       61 ccatccgata ccgaaccgac cttaccccct acaacacttt cggcctgcgc gcccaagccc
      121 gagcctttat tgcgcttgaa cacgccgacg ggttgcgcga catcgtccgg ctacccgagt
      181 tcaaccgaga tactgtttta tggctgggcg gcggcagcaa tatccttttg atggaggact
      241 acgccggtct ggtcgtacat atggaaaaca aaggcatacg cgaaattgct cgttcagacg
      301 gcatggttct gattgaagcg caggcgggcg aaatctggca cgattttgtc ctgcacgccg
      361 tcgcgctggg tttgaacggt ttggaaaacc tgagcctgat tccgggtacg gtcggcgcgt
      421 cgcccgtgca gaacatcggc gcatacggcg tagaggcgaa agatgtgatt cacagcgtgc
      481 gctgcttcga tttggatacg gaaatctttg taaccctttc caatgccgac tgccgcttcg
      541 cctaccgcga aagcctgttc aagcaggaag gtaaagggcg ttatgtgatt gtttcggtcg
      601 tatttgcatt aaaaacgcat tttgtgccga acttgggtta cggcgatttg gcggccgccg
      661 ttgccgaact gagcgcgggc agggtgccga cggcgaaaga tgtttccgat gcagtgtgtg
      721 caatccgcaa cagtaaactt cctaatccta acgtgcttgg taatgtcggc agtttcttta
      781 aaaatcccgt catcggcgcg gaaaaagctg ccgccctgtt ggagcagcat cccgatatgc
      841 cgcattatcc gcagccggac ggttcggtca aactcgccgc cggctggctg atcgaccaat
      901 gtcgtctgaa aggcttccaa atcggcggcg cggcggtaca cgacaaacag gcattggttt
      961 tggtaaacaa aaacaacgcc tcggcaaacg atgtccggca gttggcgcaa cacatcaaat
     1021 ttacagtatt tgctcggttt caggtagaat tgcacgccga acccaattgg ctgcctgctt
     1081 cgttcagcct gtaaatccaa ggagtatgcc cgtgacccgc cccgccaaaa tcaatactta
     1141 cacacgcatc atcgacgcca gccttgcgct tttcaacgag gaaggcgagc gcaacatcag
     1201 taccaaccat atcgcggcgc atttgggcat cagtccgggc aatctctatt accacttccg
     1261 caacaaagac gaaatcatcg tccaactgtt caaacgttac agcgaagccc tgcttgccta
     1321 cctcaacgaa gccgtgttgc cgtctgatgt ggaagactcc atcaactata tggcgggcat
     1381 ttacgacgtg atgtgggaat accgcttcct attcagcgac gtaaacaccc tgcttgcacg
     1441 cagtgccgaa ttgttgggcg aacacaacac cttcacccaa gccaaagtct ccccgctctt
     1501 ggtcaacctg ctgacccagc tcaacggtct gaacatcatc caagccgacc aaaccgctat
     1561 gaacgatctc gccgtcaata tgtggatggt tacgaaatac tggttcgact tcgacagctc
     1621 cctgcgcggc cgcaccaagc tgaccgaaga ctccaaagca cgcggcatcc gccgcacctt
     1681 aagcctcctt cgtccttatc ttttgcccga acaccgcaag aaatacgacc ggaaaatcgg
     1741 caacggcaac ccgtaaaccc acagcgtccg aatcagcctt cagacggcac ttacccgacg
     1801 gtatcagcga atgcgcgcag tccccccgcc ccatatctcc atcacaggcc taggttacct
     1861 cggcctgccg ctggcacaaa agttttacca acacggcagc cgcgtcgccg ccataaaacg
     1921 cagcctgact tcggacgaca tcaacctgcc catacatctc gacaccttcg acctcggcag
     1981 caccgatgcc tttcagacgg cattgtggcg gcaccacgcc gacaaacccg tctggttctt
     2041 cctgctaccg ccctcctcgc tgacgcatta cgccgacacc gtcaaacaat gggcagaact
     2101 tgcccgggcg tgcaacgtgc aacacctgat tttcacaagc agcaccagcg tttacggcga
     2161 tacagcgcgc gaatgcgacg aaaccgccac acccgatccg caaaccgagt ccgcccgcca
     2221 aatcctcgcc gccgaacaac acctgctcga cagcggcatc tccaacatcg acatcctgcg
     2281 gctgggcggg ctttattgcg ccgaacgcca tcccgtcagc cgccttgttc aaaagcaaaa
     2341 catcccgggc ggcaaccgcc ccatcaacat cgtccaccgt aatatcgccg tcgaaagcct
     2401 gtttcagacg gcatttaacc ccggcggcag gcggctgaaa aacattatcg aaccgcgcca
     2461 cccgacacga cgcgaattct acacggaaga agccgccaaa ctcggtttcc cggctcctga
     2521 tttcgcaccc gacgacagca tgggcaaaat catccgtacc gtttgcgata acagctgaag
     2581 cctgtaaaat aagcgtcaac agcaacaaac aggcattctc cgccccgatc agaaaatatg
     2641 tccgccctcc tccccatcat caaccgcctg attctgcaaa gcccggacag ccgctcggaa
     2701 cttgccgcct ttgcaggcaa aacactgacc ctgaacattg ccgggctgaa actggcggga
     2761 cgcatcacgg aagacggttt gctctcggcg ggaaacggct ttgcagacac cgaaattacc
     2821 ttccgcaaca gcgcggtaca gaaaatcctc caaggcggcg aacccggggc gggcgacatc
     2881 gggctcgaag gcgacctcat cctcggcatc gcggtactgt ccctgctcgg cagcctgcgt
     2941 tcccgcgcat cggacgaatt ggcacggatt ttcggcacgc aggcagacat cggcagccgt
     3001 gccgccgaca tcggacacgg catcaaacaa atcggcagga acatcgccga acaaatcggc
     3061 ggattttccc gcgaatccga gtccgcaaac atcggcaacg aagcccttgc cgactgcctc
     3121 gacgaaataa gcagactgcg cgacggcgtg gaacgcctca acgaacgcct cgaccggctc
     3181 gaacgcgaca tttggataga ctaaccttca gacggcatcc gacatgaaca gcccttttca
     3241 caacatcggc atcgtaaccc gccccaacac gcccgacatc caagacaccg cacacacgct
     3301 gattaccttt ttgaagcagc acggctttac cgtctatctc gacgaagtcg gcataaagga
     3361 aggctgcatc tatacccaag acaccgtcgg ctgccatatc gtcaacaaga ccgaactggg
     3421 gcaatactgc gacctggtcg ccgttttagg cggagacggc acctttctct ccgtcgcccg
     3481 cgaaatcgcc ctgcgcgccg ttccgattat cggcatcaac caagggcatt tgggcttcct
     3541 gacccaaatt ccccgcgaat atatgacgga caagctattg cccgttttag aagggaaata
     3601 ccttgccgaa gagcgcatcc tgattgaggc cgcactcatc cgcgaaggca aaaccgccga
     3661 acgcgccatc gccctcaacg atgccgtcct ctcccgtggc ggtgccggac agatgattga
     3721 gtttgaagtc ttcgtcaatc gggaattcgt ctatacccag cgttcggacg ggctgattgt
     3781 ctccaccccc accggatcga ccgcctattc gcttgccgcc ggcggcccca tcatgcaggc
     3841 aggattgcac gccttcacgc tcgtccccat ctgcccgcaa tccatgacca accgccccat
     3901 cgccattcca gacacgtccg aaatcgaaat cctcgttacc caaggcggcg acgcgcgcgt
     3961 ccatttcgac ggtcaaaccc atatcgacgt gcaaaacctc gaccgcatca ccatccgccg
     4021 ctaccgaaac cccttacgca tcctacatcc gaccgactac caatatttca aaaccctgcg
     4081 ccaaaaactg cactggggcg aacaattggt ctgaaccgac ccttaccgga aaacacctat
     4141 gaatccaaaa actccccccg accatacaga agatgccgtg cgcctgtcca aacgcatggc
     4201 gcaactgggg ctttgttcgc gccgcgaagc cgacggctat atcgaacagg gttgggtaac
     4261 ggtcaacggc aaaaccgccg tactcggtca gaaagtttcg ccggcagacc gtatcgaact
     4321 aaacaagaaa gcccacgaac agcaggcggc acgcattacc atcctgctga acaaacccgt
     4381 cggctatgtc agcgcacaag cggaaaaagg ctataaatcc gccgccgaac tgattacctc
     4441 tgaaaaccgc tgggaaagtg acaccagccg catccgtttc gatccgaaac acaaaatcgg
     4501 tcttgccccc gccggcaggc tcgatatcga ttcagtcgga ttactggtgt tgacgcagga
     4561 cggccgtatc gccaagcagc ttatcggcga aaacagcggc agtgaaaaag aatatttggt
     4621 gcgcgtgcgc ggaaaattgg acgaaaaagg acttgcctta ctgaatcacg gattgagttt
     4681 ggacggtgag aaactgcgtc ccgcccaagt agaatggcaa aacgaagacc aactgcgctt
     4741 cgtgttgaaa cagggcaaaa agcggcaaat ccgccgtatg tgcgaactgg tcggactgcg
     4801 cgtcgtcggg ctgaaacgca tccgcatggg taaggtcaag ctcggcaggc tgccgcccgg
     4861 caaatggcgt tatctcgccc ccggtgaatc gttttaaata agcattaaaa aatgccgtct
     4921 gaaaatcctt gcgttttcag acggcattgc cttatgccca aataacggtt tcttccaagg
     4981 gcctgcgcgc cttcgtggcg atttcctgaa cgcggtaacc gaatgtcgcg gcgacggaca
     5041 cgccccattc tgccgcatcg aacaaaccga actgcccgga caatacgcgt tccatatcgg
     5101 catagttgaa accttccacc gggcaggaat cgatacctgc catcgccgca cccgtcatca
     5161 tgttgcccaa cgcgatatag gtctggcggc aacaccagtc aaacaaggcg cgcgaatcgt
     5221 ccaaaatctt gatgtcgtcg gcttgaaacg cctgatacct cgccaaagat tttgccatgg
     5281 catccggttc ggtaacgccg cgccgtttga ggctttccaa cataaacggg ctgtcgaagc
     5341 gggcattttt ctttgccaaa aacaccacca aatgactggc ggtatccaaa gcatccgcca
     5401 taccccaaga aaacggcttg attgcctgtc ggatttcggg gttttgaacc acaacaaact
     5461 gccaaggctc cgaaccgacc gaactgggcg acaaacgccc gagttctaaa ataaactgaa
     5521 aatcctcggc actgattttg cgtgccgcat cgtaatgccg gcatgattta cggtttttaa
     5581 atgcggatag aacctgctct ctgtctaata ccgtcatagt gcatcctttt attactggta
     5641 ttgcaaattg atttcaaacc gatacggcac tgccgcacca tacaatccgt cctcgccatc
     5701 aagcttcatc cggactttac ccatctctct acggctggga aaacaaagcg gcggcagact
     5761 cgggaataac gccccaatgc ctttcagacg gcatttgggc atcattgcaa acgcgcctac
     5821 gggtaggcga tataggcata agccgaatgg ttgtggatag actcgaaatt ctcactctcg
     5881 acgacgaaac tcttgatgcg tttgtcggcg atcagcgaag tagcgacatc acgcaccata
     5941 tcttccacga atttcgggtt ttcgtaggct ttttcggtaa catatttttc atcggggcgt
     6001 ttgagcaaac cgtagagttg gcagcttgcc tgcgcctcca cataatcaat gacttcctcg
     6061 ataccgactt ctgcatcggc agtcaggctg acggtaacat gcgaacgctg gttgtgcgcg
     6121 ccatattggg aaatttcttt ggaacacggg caaagcgagg ttacgggaat catgaccttc
     6181 atactgtagc cgtatgcccc gtctttcatt tcgcccgtga gacagacatc ataatccagt
     6241 aaggaccgaa taccggaaac cggcgcggtt ttcttgcgga aaaacggaaa agaaacgctg
     6301 attttgccgg cgcgggaatc taaaagcgcg accatttcgg cagtcagcct gtgcaattgt
     6361 gcaaaatcca aggcttcaga atgttgctcc atcaatgcga caaaacgcga catatgcgtc
     6421 cccttctgct cagcaggcag gtaaaccgtc atggtcagac gggcaacggt ggactggatg
     6481 ccttctgcag tttgcagggt aatcggaaag cgcaggtctt tgataccgac ctgattgatc
     6541 ggcagattgc gcaaatctcg gctggattgc acgtctgcaa tagtgttcat gagttgtttt
     6601 tccttaatat tcatgtaatt gttgagatgt gtgcatggta tggcgtttcc gccggggaat
     6661 ataccgtcaa tctgcaaatg cgagattata tcactcgctt ttagcagctg cattgattgt
     6721 ttctattttt cagatagtga taaaatcttc gattattcac atctacatag gcagagacca
     6781 aatgaaattc gccacgaaag ccattcattc cagctacgat tgcgacgaac acaaccgcgc
     6841 gctgatgccg ccgatttatc aaaacagtat gtttacgttg cacgagattg gcgaaaatgt
     6901 gccttaccgt tattcgcgcc tgagcaaccc gacccgtcag attttggaag acaccgttgc
     6961 cgatttggaa cacggtgcgg caggctttgc gttttccagc ggtatggcgg ggattgatgc
     7021 cgtatggcgt accttcctgc aaccgggcga taccatcgtc gcggtcgccg atatttacgg
     7081 cggcgcgtat gacttattgg tcgatgttta tcaaaaatgg ggggtaaatg ttgtttttgc
     7141 cgatttaggc aatcccgaca atttggacga attgctcaaa gcgcacaagg tcaaactggt
     7201 ttggctggaa acgccgtcca atccgctttt acgcttggta gacatcaaag cccttgccgc
     7261 aaaagccaaa gcgaccggcg cgctggtcgg catcgacaac acctttgcca cgccgtatct
     7321 gcaacagccg ttggatatgg gttgcgattt tgtgttccat tccgctacca aatatttgtg
     7381 cggccattcc gacgtattga tgggcatcgt cgttgccaaa accaaagagc tggctcagcc
     7441 tttgcacgat atgatggtgc ataccggtgc gattgcaggc ccaatggact gctggctggt
     7501 gttgcgcggc atcaaaacgc ttgccctgcg tatggaggca cactgcaaaa acgcactcga
     7561 aatcgcgcgc cgtctggaag accatcctgc cattgaaaaa gtgttccatc ccggcctgcc
     7621 gtcgcacgaa cattatgaac tcgcccaagc gcaaatgcct aaaggcatcg gcggcgtggt
     7681 gacggtttat ctcaaaaacg acacgcgcga agcggcaaac agcgtgatta aaaacatgaa
     7741 actggtcaaa atggcttcca gcctcggcgg cgtggaaagt ttggtcaacc attgctattc
     7801 ccagtcccac agcggcgtgc cgcataatgt gaaaatggaa atgggcatca aagtcggcct
     7861 gctgcgtttc tccatcggca tcgaagacgc ggacgatatt tggaacgata tttccgccgc
     7921 actcgatacg actttgtaaa ctgtaaaaat gccgtctgaa accatggttt cagacggcat
     7981 ttcaattaac ccggccgaaa atcaacgctt caacatcttt gccgcctcaa tagcgtaata
     8041 ggtcaaaatc ccgtccgcac ccgcacgttt gaatgccagc aggctttcca aaaccacttt
     8101 gccgccgtcc agccagccgt tggcaatcgc tgcctgcaac atcgcgtatt ctcccgaaac
     8161 ctgataggca taagtcggta cgccgaactc gtccttcacg cggcggacaa cgtccaaata
     8221 cggtaaaccg ggcttcacca tcaccatatc cgcaccttcc cgaatatcga gcgccacttc
     8281 attcagcgcc tcatcggtat ttgccggatc catctggtag gttttcttgt ccgccttgcc
     8341 caaattgccc gaactgccca ccgcatcgcg gaacggcccg taaaacgccg aagcatattt
     8401 ggcggaatac gccataatcc gcgtgtggat atgcccggca tcctccaacg cctcgcgaat
     8461 cgcaccgata cgcccgtcca tcatatcgga aggggcaacc acctgtgcgc ccgcttcagc
     8521 gtggcacaaa gcctgcttga ccaaaacctc tacggtttca tcgttcatca cataaccgtt
     8581 ttcgtccgtc agcccgtcct gaccgtgaac cgtataagga tcgagcgcga catccgtcat
     8641 aatgcccagt tcgggaaacc tctcgcgcag ggcgcggacg gctgccggca cgagtccttc
     8701 gggattgtac gcttcctctg cacgctcggt tttgtttgcc gtaaccacgg gaaagagtgc
     8761 caacatcgga ataccgagct ttaccgcctc ttccgccgta aacagcagcc tgtccaaact
     8821 ttgacgcttc acacccggca tagaaggcac atcctcctcg cgcgccgacc cctccaatac
     8881 gaacaccgga taaatcaaat catcggcggt cagcgtgtgt tcgcgcatca ggcggcgtga
     8941 aaaatcgtcc ctgcgcatac ggcgcatacg cgaagccgga acattgcggt aaggaaactg
     9001 cataagccct ccaatcatcc tgtcaacaat tcaaaccata cggaagccgc cgcaacttgc
     9061 agacagcatc gggcggcaat caaaatccgt tttcaccgga aagggtttcg gcccgccgaa
     9121 atgccgcgcc gaaggacggc gtcccgccca ttaaagaaca atagcaaaac aacagcttca
     9181 ggctgtcagc cttcgatatt cttacgccac aataccaaaa gtttcccgat atgctgaaca
     9241 ggttgcgcgt caaccgcctc acataaggca gtgcagattt cgatacgttc ggcacggtcg
     9301 tcgccgaata cgcgcacttt aatcagctca tgcgccgtca atgccgcatc ggtttccttg
     9361 atgaccgcgt ccgtcagacc ctgctgaccg accatcacaa caggatggag atggtgcgcg
     9421 cgcgctttca gttccaaaat ttctttggtg ttcaatttgg tatccgtcat tttcctactg
     9481 cttgaataaa aagaataatg cggcattgta cgcgatttgg cacgacatcg gcaaaattaa
     9541 cgtacaatac gcggtttcca ttccgacccg cgaaccacta tggctgtacg ttccaaatcc
     9601 tcaaaagcgt ggctgcacga acacgtcaac gaccactacg tccatatggc gcaaaaagac
     9661 ggctaccgcg cccgtgccgc atacaaactt ttggaaatca acgacaaaga caaattaatc
     9721 aaacccggca cggtacttgc cgacttgggc agcgcgccgg gaagctggtc gcaggttgcc
     9781 gccaagctga cgggttcttc cggagcagtt ttcgccttgg acatcctgcc tatggaagcc
     9841 atagggggcg tctccttcat tcagggcgac ttccgcgaga acgacgtact ggcacaattc
     9901 gaaaccttgt tggacaaccg cccgctcgac cttgtaattt gcgatatggc gcccaatatg
     9961 tcgggaaacg ccgtaagcga tcaggcacgc agcttttatc tgtgcgaact ggctttagac
    10021 ttcgcctcgc aacacctgaa aaccggcggc agctttttgg tcaaagtctt tcagggtgca
    10081 ggctatcagg aatacatggc agccatgcgc gaaattttcg gcacggtgca gacgcgcaaa
    10141 cccgaagcct cgcgcaatcg ctccagtgag atttatttat tgggcaaaaa taaacgctga
    10201 caatacagac ggcgtgcttt acaatcattt ccgttttaca cctcaattat ggagccttgc
    10261 taagtgggga acacctttaa atcaatcctt gtctgggtcg ccttgggtat cggcctgatg
    10321 gctgcgttca acgctttaga cggtaaaaaa gaagacaacg ggcaaatcga atattctcag
    10381 ttcatccaac aggtcaacaa cggcgaagta tccggcgtca acatcgaagg atccgtcgtc
    10441 agcggctacc tgattaaggg cgagcgcacc gacaaaagca ccttcttcac caacgcgcct
    10501 ttggacgaca acctgattaa aacactgctc gacaaaaacg tccgtgtaaa agtaacgccg
    10561 gaagaaaaac cgagcgcgct ggctgccctg ttttacagcc tgctgcccgt cctgctgctg
    10621 attggcgcgt ggttctactt tatgcgtatg cagacgggcg gcggcggcaa aggcggcgca
    10681 ttctcattcg gcaaaagccg cgcccgccta ctggacaaag atgccaacaa agtgaccttt
    10741 gccgatgtcg ccggctgcga cgaagccaaa gaagaagtgc aggaaatcgt cgattacctc
    10801 aaagcgccga accgctatca aagcctcggc ggtcgcgtgc cgcgcggcat cctgctggcg
    10861 ggcagcccgg gtacgggtaa gacgcttttg gcaaaagcca ttgcaggcga agccggcgtg
    10921 ccgttcttca gcatttccgg ttccgacttt gtcgaaatgt tcgtcggtgt cggtgcgagc
    10981 cgcgtccgcg atatgttcga gcaggcgaag aaaaacgctc cctgcatcat ctttattgat
    11041 gaaatcgacg cagtcggccg ccaacgcggc gcaggtttgg gcggcggcaa tgatgagcgc
    11101 gagcaaacat taaaccaatt gttggttgaa atggacggtt ttgagagcaa tcagactgta
    11161 attgtgattg cggcaaccaa ccgccccgac gtactcgatc ctgcgctgca acgccccggc
    11221 cgtttcgacc gccaagtggt tgtccccctg ccggacatcc gggggcgcga acagattttg
    11281 aacgtccatt ctaaaaaagt gcctttggac aaatctgtgg atttattgtc cctcgcgcgc
    11341 ggcacgccgg gtttttccgg cgcggatttg gcgaacttgg tcaacgaagc cgccctgttt
    11401 gccggccgcc gcaataaagt caaagtcgat cagagcgatt ttgaagacgc caaagacaaa
    11461 atctatatgg gtccggaacg ccgcagtatg gtgatgcacg aagacgaaaa acgtgcgacg
    11521 gcgtatcacg aatccggaca cgcgattgtt gccgaaagcc tgccctttac cgaccccgtc
    11581 cacaaagtaa ccattatgcc gcgcggacgt gcgctgggtc tgacttggca gcttccggag
    11641 cgcgaccgca tcagtatgta taaagatcag atgttgagcc agctctccat cctgttcggc
    11701 ggacggattg ccgaagacat cttcgtcgga cgcatctcca ccggcgcatc aaacgacttt
    11761 gaacgcgcaa cccaaatggc gcgcgaaatg gtaacgcgct acggcatgag cgacaaaatg
    11821 ggcgtgatgg tttatgcgga aaacgaaggc gaagtcttct taggacgcag cgtaacccgt
    11881 tcgcaaaaca tttccgagaa aacccagcag gacatcgatg cggaaatccg ccggattttg
    11941 gacgagcagt atcaggttgc ctacaaaatc ctcgatgaaa accgcgacaa gatggaaacc
    12001 atgtgcaaag ccctgatgga atgggaaacc atcgaccgcg atcaggtact ggaaatcatg
    12061 gcgggcaaac aacccagtcc gcccaaggat tacagccaca acctgcgcga gaatgcggac
    12121 gcggcggaag ataacgcgcc gcacgctccg actcgggaag aaaccgaagc acctgccccg
    12181 gcagacaccg cttcgacaga gtccgagcag cagcctgaaa acaaggctta acttcccgaa
    12241 caaacggcag cccgcaagct gccgttttcc catcctgttt tcagacggca ttttccgctc
    12301 aatgccgtct gaaacgccaa agccgtatcg gtttttgcgg atctgcgata tggcggttta
    12361 aattgaaatc agacgaggca aggctgtacc ggtttaaaat taaaccgcta taataccgcc
    12421 tttcgaatac acgcccgcat tggtgatgcc tgtgaaaaaa gttgaaaaaa acatcttggt
    12481 gctgcacggc gcggacaaaa tgttcgagct ggtcgataag gttgaagact atccgcactt
    12541 tctgccgtgg tacagcaaga ccgaggtcat cgggcgtagc ggcaacgaac tgaaggcgcg
    12601 gctgtttatg gactatatgc acgttcgcca atcattcgcc acgcacaacc gcaacattcc
    12661 gggcagggaa atccgtatgg aactgctcga gggtccgttc aaaaccttac gtggaacgtg
    12721 gaaatttatc gatttgggcg acgatatgtg caaaatcgaa ttcaatttgg aatacgattt
    12781 ttccaatgcc gttttgtccg ccttaatttc ccccgtcttc aaccaccttt ccgccacgct
    12841 ggtcgaagcg ttcgtcaaag aggcagaccg ccgttatgct tgaaattgag attgtgtacg
    12901 ggctgcccga ccgacaggtt ttgaaaacca tgcagcttgc cgagggaaca accgtccgcg
    12961 ccgccgcact gcaaagcggt ttggacggca tatttgaaga tttaaacctg cattccgcgc
    13021 ctttgggcat tttcggcaaa gccgtcaaag acgacacgcc cctgcgcgac ggcgaccgca
    13081 tcgaagtgta ccgcccgctg ttgatcgacc ccaaagaagc gcgccgcaaa cgcgttcaaa
    13141 atcaagaaga ataaccatgc cgtctgaagc cttcagacag cattcgacag aaacacggaa
    13201 aatatcatgt caaacaaaat caaaatgctt gtcggattgg gcaaccccgg caaagaatac
    13261 gaacaaaccc gacacaatgc gggtttttgg ttcctcgacg aactggcgtg gaaatggaag
    13321 gcttcattta aagaagaaaa aaaattcttc ggcgaagtcg cccgtgccgc cctgcccgac
    13381 ggcgacgttt ggctgctcaa acctgccacg ttcatgaacc gttccggaca ggcagttgcc
    13441 gcgcttgcac agttctacaa aatcaaaccc gaagaaatcc tcgtcgtcca cgacgaactc
    13501 gacattccct gcggacggat taaattcaaa ctcggcggcg gcaacggcgg acacaacggc
    13561 ttgaaagaca ttcaggcaaa actcggcacg gcagactatt accgcctgcg cctcggtatc
    13621 gaccacccgg gcgaccgcaa cctcgtcgtc ggctatgtcc tgaacaaacc cagtacggaa
    13681 caccgccgac agattgacga tgccgtcgcc aaatccctgc aagccatacc cgacatcctt
    13741 gccggcaaat gggaagaagc aacccgcttc ctgcacagca aatgacccga tgccgtctga
    13801 agccctttca gacggcatgt tcccgatttc catatccgaa cagtcatgac cgaactcaag
    13861 cagcttatcc aaaccgaatc catccccgtc atcgaagaaa ccctcgattt cctgctgtac
    13921 gaatgcagca tcgacgacgc accatccgcc gaagaagtgg cacaatggcg cgacatactt
    13981 gccgcacgcg gcggcaaatt cctgcgcctg tccaaaatct gccaaacgtg gctggacgag
    14041 gaggcggcat gaagctgccg cgcaaccgct tcagcctgct ttccgcattg tggtttgccg
    14101 gcggcatcta ttcgctgctc ttcaaagctg ccgacaccgc gccgccgccg tttccgcatt
    14161 tcgacaaagc agcacacctt gccctgtttt tcgcacaaat ctggcttttg accaaagcat
    14221 tcaaaaccgg aaaacttccc atcccctacc gcagcctgat ggtctttgcc ctctgtttcg
    14281 ccctcttcag cgaatgcgcg caggcatggt ttaccgcaac gagaaccggc agtttgggcg
    14341 atgttcttgc cgatatggca ggtacggttc tcgcactctt tgccgcccgc gccgccgacc
    14401 gcccggactg aatcggttta tttcccccaa acaggatgca cctcttcccg atacatccta
    14461 tttttcccct tacatatcaa tcccatctca taaacaaaac cgacaaatcg tttacaatat
    14521 atttacacta catcagatta caaatatact cgaaccagtt gtagaatcgg cggttccaca
    14581 aaccgtttcg gattgcacga cacaaaagaa aaaccgattt tattgcctta aaggagtatt
    14641 catgaacctg catgcaaagg acaaaaccca gcatcccgaa aacgtcgagc tgctcagtgc
    14701 gcagaagccg attaccgact ttaagggcct gctgaccacc attatttccg ccgtcgtctg
    14761 tttcggcatt taccacatcc tgccttacag ccccgatgcc aataaaggta tcgcgctgct
    14821 gattttcgtt gccgcacttt ggtttaccga agccgtccac attaccgtaa ccgcactgat
    14881 ggtgccgatt ctcgccgtcg tactcggttt ccccgacatg gacatcaaaa aggcgatggc
    14941 tgatttttcc aacccgatta tctacatttt tttcggaggc ttcgcgcttg ccaccgccct
    15001 gcatatgcag cggctggacc gtaaaatcgc cgtcagcctg ttgcgcctgt cgcgcggcaa
    15061 tatgaaagtg gcggttttga tgttgttcct cgttaccgcc tttctgtcca tgtggatcag
    15121 caacaccgcc accgccgcga tgatgctgcc tctagcaatg ggtatgctga gccacctcga
    15181 ccaggaaaaa gaacacaaaa cctacgtctt cctcctgctc ggcatcgcct attgcgccag
    15241 catcggcggc ttgggcacgc tcgtcggctc gccgcccaac ctgattgccg ccaaagccct
    15301 aaatctggac ttcgtcggct ggatgaagct cggcctgccg atgatgctgt tgattctgcc
    15361 cttgatgctg ctctccctgt acgtcatcct caaacctaat ttgaacgaac gcgtggaaat
    15421 caaagccgaa tccatccctt ggacgctgca ccgcgtgatc gcgctgttga ttttccttgc
    15481 cacagccgcc gcgtggatat tcagctccaa aatcaaaacc gccttcggca tttccaatcc
    15541 cgacaccgtt atcgccctga gtgccgccgt cgccgtcgtc gtcttcggcg tggcgcaatg
    15601 gaaggaagtc gcccgcaata ccgactgggg cgtgttgatg ctcttcggcg gcggcatcag
    15661 cctgagcacg ctgttgaaaa catccggcgc gtccgaagcc ttgggacagc aggttgccgc
    15721 caccttttcc ggcgcgcccg catttttggt gatactcatc gtcgccgcct tcattatttt
    15781 tctgaccgag ttcaccagca acaccgcctc cgccgcattg cttgtaccga ttttctccgg
    15841 catcgctatg cagatggggc tgcccgaaca agtcttggta ttcgtcatcg gcatcggcgc
    15901 atcttgtgcc ttcatgctgc cggttgccac accgcctaac gcgattgtgt tcggcacggg
    15961 cttaatcaag caacgcgaaa tgatgaatgt cggcatactg ctgaacatcc tctgcgtagt
    16021 attggttgct ctgtgggctt atgctgtact gatgtaaacc atcgacctaa acaacaagac
    16081 cgtctgaaag aatatttttc agacgacctt gaagtttgtc gttcagacac aatttgtcga
    16141 atcattcaaa accggattct aacgaaagga aacccatgat tatcctgcac accaacaaag
    16201 gcgacatcaa aatcgaactc gatttcgaca aagcccccgt taccgccaaa aacttcgagc
    16261 aatacgtcaa aaacggcttc tacgacggcg taatcttcca ccgcgtcatc aagggcttca
    16321 tgattcaagg cggcggcatg gatgaaaaca tgaacgaaaa agaaacccgc gatccgattc
    16381 aaaacgaagc gtccaacggc ctgcccaacg ataaatacac catcgccatg gcgcgtactt
    16441 ccgatcccca ttccgccagc gcgcaattct tcatcaacac tgccgacaac gctttcctga
    16501 acttccgttc taaagagctg tacggcaaaa ccgtcgtcca agactggggc tatgccgtat
    16561 tcggtaaagt cgttgacggt tttgacgttg tcgatgccat cgaaggcgtt tctaccaaac
    16621 gtcatggtta ccacgacgac gtaccgagcg aacctgtcgt catcattaaa gccgaagcgg
    16681 tataaaccga caatccgaaa gcagcctgca caaaggctgc ttttatttca gacggcatgt
    16741 tatttgatgt aaccgtgcta tgccgtctga aaaccggacg caagccttca gacggcatac
    16801 cgctatgtta aaatatgccc gtttttccta aacggacaca aaggaaacct tatggcaagc
    16861 atcgcccgcg acatcttcaa agcctacgac atccggggta ttgtcggcaa aaccctgacc
    16921 gacgaagccg cctaccttat cggcaaagcc atcgccgcca aagccgccga aaaaggcatt
    16981 acccgcatcg cgctcggacg cgacggacgc ttgagcggtc ccgaactgat ggaacacatc
    17041 cggcgcggct ttaccgacag cggcatcaat gtcctcaatg tcggtatggt tgccactcct
    17101 atgctctact tcgccgccgt caacgaatgc ggcggcagcg gcgtgatgat taccggcagc
    17161 cacaatccgc ccgattacaa cggctttaaa atgatgctcg gcggcgacac gcttgccggc
    17221 gaagccatcc aagaactttt gtccatcatt gaaaaagacg gttttgctgc cgccggcaaa
    17281 caaggcagcg tcaccgaaaa agacatctcc ggcgaatacc tcaaacacat taccggacac
    17341 atcaggctca aacgcccgat gaacatcgcc attgacgcgg gcaacggcgt gggcggcgcg
    17401 tttgccggca aactctacaa aggcttgggc aacgaagtaa ccgagctttt ctgcgacgtg
    17461 gacggcactt tccccaacca ccatcccgac ccatccaaac cgaaaaacct gcaagatttg
    17521 attgccgcgc tgaaaaacgg tgatgccgaa atcggcttgg cgtttgacgg cgatgccgac
    17581 cgcttgggtg tggtcaccaa agacggcaac attatttatc ccgaccgcca actgatgctt
    17641 ttcgcgcaag acgtgttgag ccgcaatcct aaagccaaag tgattttcga cgtcaaatcc
    17701 acccgtctgc ttgcgccttg gattaaagaa cacggcggcg aacctgtgat ggaaaaaacc
    17761 ggccacagct ttatcaaatc cgccatgaaa aaaaccggcg cgccggttgc cggcgaaatg
    17821 agcggacaca tcttcttcaa agaacgctgg ttcggcttcg acgacggtct gtacgccggc
    17881 gcacgcctct tggaaatcct gtctgcctcc gataatccgt ccgaagtgtt aaacaacctg
    17941 ccgcaaagca tttccacgcc cgaactcaac atcgccctgc ccgaaggcag caacggccat
    18001 caggttatcg acgaactcgc cgccaaagcc gaatttgaag gcgcaaccga aatcatcacc
    18061 atcgacggtc tgcgcgttga atttcccgac ggcttcggtc tgatgcgtgc ttccaatacc
    18121 acgccgattc tggtgttgcg ttttgaggcg gatacgcaag aagccatcga gcggattcaa
    18181 aaccaattca aagccgtcat cgaaagcaat ccgaatctaa tctggcctct gtaaacacag
    18241 gaaaaatgct taatcaaatc ttggtagatt ggatttggct taaaaatctc cgcgtccgtt
    18301 cgtgtttggg gtggtcgaac aactctttcg ggctgccctg ctctacgata acgccgccgt
    18361 ccatcacgac aacggtagtc gcaacttcca gcgcgaactt gatttcgtgg gtaacgacga
    18421 ccatcgtcca accttcccgc gccaattcct tcatggcgtt caacacgtct tgcaccaact
    18481 cggggtcaag cgcggaagtc ggttcgtcaa acagcatcag ctcgggctga atcgccaatg
    18541 ctcgggcaat gccgacgcgc tgctgctgac cgccggaaag ctggtaggga tacaaatcca
    18601 ctttgtcgcc caagccgact ttttccagca gtttcagagc ctcttcgcgc gcttgggcgg
    18661 caggcttgcc ctgtacggca accggtcctt ccatcacgtt ttccaaggcg gttttgtgcg
    18721 gaaagaggtt gtattgttga aacaccatgc ctgatttgcg gcgcagtgcc aaaatatcgt
    18781 gtttgcttgg ttttttagaa aaatcgattt tcagcggtcg ctcgttgtcg aactcgattt
    18841 gtccgtcttc gggcatttcc aacgcgttta ggcatcgcag aaacgtcgtt ttgcctgagc
    18901 cggaaggccc gaggatgacg accacctgcc ctttgcacac atccaaattg atgccgcgca
    18961 aaatggtatt ttcgccgaag gtcttatgga tattgcggat tttaatcatg acaactcctt
    19021 atttggcgac atagcggtcg aagcgttttt ccaagcgcgc ctgaatcagg aacagcactt
    19081 tgcaaaaaca ccagtaaacc aaagcggctt cgatatagac gggcaaaaag tcataagtgc
    19141 ggtttgccgt ttcctgcgcg acgcggaata attccgttac cgtcacgact gccgcgagcg
    19201 aggtgttttt aaacaaaccg ataaactcgt tgctcaaagg cggcacggca acgcgaaatg
    19261 cctgcggcgc gacgatgcgg cggaacgtct gcatataggt catgccgatg gagaaacctg
    19321 cttcccattg gcctttcggt acggacaaaa ttgccgcgcg tatggtttcg gaagcatatg
    19381 cgccgacatt gagcgaaaag ccgatgatgg cggcaggaat cgggtcgata tagatgccga
    19441 cggaaggcag cccgtaaaac acaatcacaa gctgaaccaa cagcggcgta ccgcgaatga
    19501 cggaaatata aaattccacc aatttcagca ggattttccg cacgatgccg ccggcgggca
    19561 taatccgcac caaagccacg gctaccgcaa tcatcatacc gataacgaaa gaagctgccg
    19621 ccaaaggcag agagaccgcg aagccggctt tgaccatagg caaaaacgcg ctgacaatca
    19681 tatcggcgcg tgtttccgtc ataaacggca gcgaagcaag gaaattattg aacactgatg
    19741 tcttttccga agaattgttc gcccagtttt ttcagcgtac cgtcggcttt cagctcgttg
    19801 attgccgtac tgaatttcgc cacggcttcg tcattgccct tgttgacaat caggccggaa
    19861 ccgacttttt catcggcagg tgcggaccaa acgattttca cgcccgcatt cgggtttttc
    19921 ttcagatagt ccaaaaccgc caattcgtcg ttcagggttg catcggcacg tttttgttca
    19981 atcagggtca gcgattgcgc caaaccgtcc actgccacca aatctgcgcc tgcagctttg
    20041 gctttttcgc cgtagttgct ggtcagggat tgtgcggttt tcacgccttt gatgtcgtcg
    20101 atagatttga tgttgctgtc gttacgggca accaatacgg caccgctcca gctgtaagga
    20161 tcggatttgt cgaatgtcgc ttggcgttcg gggctggtca gaccgacttg gtttgccacc
    20221 acgtcgaaac gccccgcctt caaacccgcc atcatcgaat cccattgcgt ttctttaaac
    20281 tcgactttca cgcccagttt ttccgccacg gcgcgggtta cttccacatc gtaaccggtc
    20341 agtttgccgt ccttgtcgtg gtaggtaaac ggtgcgtaag tgccttccgt gccgacggta
    20401 accgtgcctt tattgttgat gcgctcgatt aaagaaccgg aaactgccga ttgtgcaggc
    20461 gcggaagatg ctccgctgcc gctttccgaa ccgccgcagg ccgccaaaac caatgcggca
    20521 atgccgccga gtacgaattt tttcaacatc attctctcct gtaaaaagtg tgcaagtgcg
    20581 gcattctaag tgaaattgcg gcaaacacaa agaatacttt ttttatatgg ttattccaaa
    20641 tcggaatgga aaagatatgc cgaagccgcc ggaagcggaa ataaaggggg cgggaaaggc
    20701 gacgggcggc acgaaaccga aaagcggcat caggtatgca aacggcggat tcacgcacgc
    20761 cgttccggca aaaatccgcc tgccgattcg gtgctataat ccatccgaaa cagatgacac
    20821 caaaaaggaa catctcatga acacgcccca atccgccatc attcccgacc acgcccaagc
    20881 cggcatcttt atcgaagccg acttcgccgc caaccgcctc aacgatatta aagccgcctg
    20941 ccgcgcttcg ctcgacgcgt tatccgcctt gaaaacccgc tttccggacg atattttggg
    21001 tctgaccatc gccttcggca gcaaagcctg ggcaacattc ggacatacgg acgaaggcag
    21061 tgaaatcaaa cccttctccg aaatgggcaa cgggcttgcg ccgtccacgc agcacgatat
    21121 gtccatccac atccaatctt tccgccaaaa caccgcctac gcgcttgccc aatccgtttt
    21181 gggcgcgttc ggcgacagca tatgcgtcgc gtccgaagaa cacggtttgc gcctgtatca
    21241 ggatcgcggg ctggacggtt tcgtcgacgg cacggaaaac ccgcagggcg atgaaaatgt
    21301 ccgcgaagtc gccatcatcc ccgaaggaaa acccgatgcg ggcggcagct atgtcctgct
    21361 gcaaaaatac ctgcacgatt tgaaaaaatg ggatgccgtc cccgtcgccg aacaggaggc
    21421 ctcggtcgga cgcggcaagg aaaccgacga cgaattcggc cgcgatgtcc gcctgcccga
    21481 ttcgcacctc ggccgcgtca acctgaaaga aaacggagtc ggcctgaaaa tcgtccgccg
    21541 cagcctgccc ttcggcaaaa tcagcggcga acacggtttg atgtttaccg catactgccg
    21601 cacgctgcac aatatcgaag cgcaattatt gagtatgttc ggcgatacgg acggcaaaac
    21661 cgacctgctg ctccaacatc tctccgccgc cgtttcgggc ggatactact acgcgccgtc
    21721 tgtcgaacgc ctgcaaaacc tctaagccgg acgatgccgt ctgaaaccat ttttcagacg
    21781 gcatttt
//
LOCUS       DAWKOX010000013        21678 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.013, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000013 DAWKOX010000000
VERSION     DAWKOX010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21678
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.013"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(62..1948)
                     /gene="uvrC"
                     /locus_tag="WJK78_000353"
     CDS             complement(62..1948)
                     /gene="uvrC"
                     /locus_tag="WJK78_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ7597330.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSEAEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYHDSVREAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFSVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEKVEGISKALAETIY
                     NHLH"
     gene            complement(2003..4165)
                     /locus_tag="WJK78_000354"
     CDS             complement(2003..4165)
                     /locus_tag="WJK78_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ7597331.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLAIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAYGMAHVYFEVGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRNGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHTVAVLVIACPCALGLATPAAIMVGMG
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGSPQVAAVYCVPDSGFDEDALYRI
                     AAAVEQNAAHPLARAIVSAAQARGLDIPAAQNAQTVVGAGITAEVEGVGLVKAGKAEF
                     AELALPKFLDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALSVSRATLRNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            4304..5254
                     /gene="trxB"
                     /locus_tag="WJK78_000355"
     CDS             4304..5254
                     /gene="trxB"
                     /locus_tag="WJK78_000355"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ7597332.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            5410..5778
                     /gene="rpsF"
                     /locus_tag="WJK78_000356"
     CDS             5410..5778
                     /gene="rpsF"
                     /locus_tag="WJK78_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ7597333.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            5779..6081
                     /gene="priB"
                     /locus_tag="WJK78_000357"
     CDS             5779..6081
                     /gene="priB"
                     /locus_tag="WJK78_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ7597334.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHKSWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            6088..6318
                     /locus_tag="WJK78_000358"
     CDS             6088..6318
                     /locus_tag="WJK78_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ7597335.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            6335..6787
                     /locus_tag="WJK78_000359"
     CDS             6335..6787
                     /locus_tag="WJK78_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ7597336.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            6801..6908
                     /locus_tag="WJK78_000360"
     CDS             6801..6908
                     /locus_tag="WJK78_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HEZ7597337.1"
                     /translation="MPSETLPIVGMWFQTVFVLFSVYSAKIGMVVFIVD"
     gene            7483..7638
                     /locus_tag="WJK78_000361"
     CDS             7483..7638
                     /locus_tag="WJK78_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597338.1"
                     /translation="MYTGHYGGNTVWEAAASRGIGTAGDAPMPSGVKAGQSAVWKKAM
                     ESVGRRS"
     gene            complement(7754..8560)
                     /locus_tag="WJK78_000362"
     CDS             complement(7754..8560)
                     /locus_tag="WJK78_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7597339.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFAMMPGMIFGVFTGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(8561..9307)
                     /gene="pssA"
                     /locus_tag="WJK78_000363"
     CDS             complement(8561..9307)
                     /gene="pssA"
                     /locus_tag="WJK78_000363"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ7597340.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(9362..9784)
                     /locus_tag="WJK78_000364"
                     /pseudo
     CDS             complement(9362..9784)
                     /locus_tag="WJK78_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688963.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9890..10372
                     /locus_tag="WJK78_000365"
     CDS             9890..10372
                     /locus_tag="WJK78_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ7597341.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGVMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(10424..11635)
                     /locus_tag="WJK78_000366"
     CDS             complement(10424..11635)
                     /locus_tag="WJK78_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ7597342.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            11858..14296
                     /locus_tag="WJK78_000367"
     CDS             11858..14296
                     /locus_tag="WJK78_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ7597343.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNSKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPSPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDSPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            14505..15815
                     /locus_tag="WJK78_000368"
     CDS             14505..15815
                     /locus_tag="WJK78_000368"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ7597344.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDIFKEQAERRVSLGLILAKLVDENKLEPTEEQVKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            15911..16525
                     /gene="clpP"
                     /locus_tag="WJK78_000369"
     CDS             15911..16525
                     /gene="clpP"
                     /locus_tag="WJK78_000369"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ7597345.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(16582..17847)
                     /gene="ispG"
                     /locus_tag="WJK78_000370"
                     /gene_synonym="gcpE"
     CDS             complement(16582..17847)
                     /gene="ispG"
                     /locus_tag="WJK78_000370"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ7597346.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSVWRTAYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(17863..18624)
                     /gene="pilW"
                     /locus_tag="WJK78_000371"
     CDS             complement(17863..18624)
                     /gene="pilW"
                     /locus_tag="WJK78_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ7597347.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQKSFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(18627..19721)
                     /gene="rlmN"
                     /locus_tag="WJK78_000372"
     CDS             complement(18627..19721)
                     /gene="rlmN"
                     /locus_tag="WJK78_000372"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ7597348.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(19865..20290)
                     /gene="ndk"
                     /locus_tag="WJK78_000373"
     CDS             complement(19865..20290)
                     /gene="ndk"
                     /locus_tag="WJK78_000373"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ7597349.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPAEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(20349..21500)
                     /locus_tag="WJK78_000374"
     CDS             complement(20349..21500)
                     /locus_tag="WJK78_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ7597350.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKDSGG"
BASE COUNT         5209 a         5348 c         5875 g         5246 t
ORIGIN      
        1 atcggtatac cgacctgctg tatcatattt tttacagacg gattttgtct ttgacagcat
       61 gctaatgcag atgattgtaa atcgtttccg ccaatgcctt gctgatgcct tccacttttt
      121 ccaagtcctc gcggctggcg gcaatcacgc cgcgcagacc gccgaagcgg gtgagcaggg
      181 cttggcggcg tttgctgcct acgccgggga tgtcgcttaa ggaggaggta acgcgggctt
      241 tgtcgcgttt tttgcggtga ccggtaatgg cgaaacggtg cgattcatcg cgtacggttt
      301 gcaatagatg caaggccggg ctgttgggcg gcaggcggaa gacttcgccg gtaaaaggca
      361 gtatgagctc ctccataccg gctttgcgct ccgggccttt ggcaatgccg accaaaggga
      421 tgtgcagccc gagttcttcc cataccgata cggctacgcc gatttgccct ttgccgccgt
      481 caatcaacac ggcatccggc catttgacgg tctcgccgtt ggcttcggcc tcctgcattt
      541 tgccgtaacg gcgcgtcaac acttcgcgca tggcggcgta gtcgtcgccg ggtttggcgg
      601 tcgtgatgtt gtagcggcgg tattgcgaag gctggatgtt ttgctcatcg tacacaacgc
      661 aggacgcaat agtggcttcg ccttgtgtgt ggctgatgtc gaaacattca aggcggttga
      721 ggccgtctga atccatgccg aggatttttg ccagttcatc aatgcggtgt tgctggctgc
      781 tttgttgcag gcggcgttgt gcaatcgcca tttgtgcgtt ttgttccgcc attttcaacc
      841 agactttgcg ttcgcctatg gttttggtga caaattgcat ctgcttgccg tgttcgcctt
      901 ccaaagcctc tttcagcgca tcgggaacgg aaaagttgct aataatgatg tcgggtttgc
      961 ttttgcccaa ataatgttgg gcgacgaagg cttcggcgta atcttgtccg tttggctcgg
     1021 gatcgttttt ggtgtcgggg aaaaagcttt tatcgcctac atgccgtccg ccgcgtatgc
     1081 tgacccagtg tacgcagacg aggccgtctg aaacggcgag cgcgagcagg tcgatgtcgt
     1141 tggggttgtt cgggtttttg ctgtcgatga actggttgct ctgcataatg ccgagtgctt
     1201 ggatttggtc gcggtagcgg gcggcttctt caaattgcag attagcggcg gcggtttgca
     1261 ttttgtgttg cagggtacgc gtcagttcgt cggttttgcc attgaggaaa gttgctgctt
     1321 cacgcacgct gtcgtgataa tcttcttcgc tgatatgacc gacacaaggt gcggtacagc
     1381 gtttgatttg gtaaagcaga caaggacggt cgcggtgctc gaatacactg tcttcgcagg
     1441 tacgcagcat aaagactttt tgcaacactt gaatactgtc gcgcacggcg ttgctgttgg
     1501 gatacgggcc gaaatattga tttggctttt tcagtgtgcc gcggtaatac gccatttgcg
     1561 gatattgatg gccactgagc atcaaataag gatagctttt gtcatcgcgg aaaagaatat
     1621 tgtatttcgg cgacagagct ttaatgaagt tgttttcgag aatcagtgct tcggcttcgg
     1681 aacgcgtgat ggtggtttcg atatgatgca cctgttttac catcaatgcg atgcgcggcg
     1741 aatggtcgtt tttttggaaa tagccggaca cgcgccgctt gaggttgacc gctttgccga
     1801 cgtataagac tttgccgcct tcgtcaaaaa aacggtacac gcccggcagc ttgggcaggt
     1861 ttttgaggaa gagcgggatg tcgaattgtt ccggagaacg gttttctgta ttcatatcaa
     1921 tcatttgaaa aacggcttca gacggcatat cggcagcggc agccttatcc gttcggaaaa
     1981 gctgtcgggt ggttatatgc ggtcaatcga tttttacccg tttcaggcgc aaggcgttgc
     2041 tcaacacgga aaccgagctt gccgccattg ccgcgcctgc gatgacaggg tttaaaaaac
     2101 cgagcgcggc aagcggaatg cccaaaatat tgtagaagaa ggcgaaaaac aggttttgct
     2161 tgatgtttct caacgtcgcc cgcgataccg atagggcatc ggcgagttgg ttgaccgaat
     2221 gttgcatcag cgtggcggat gcggtgtgtt cggcaacgtc cgcgccgcct ttcatggcga
     2281 agctaacgtt ggcggcggcg agcgcaggtg cgtcgttgat gccgtctccg accatcgcca
     2341 cggttttgcc ggcggctttg agtttctgca cttcggcggc tttgtcgcgc ggactcatat
     2401 taccgaaggc gtgtgcgatg cccagttgtt tggcgacgta ttcgaccgtg ccttggttgt
     2461 cgccgctcat aatatagaca tcgatattgt gttttttcag acggcctatg gcttcggcgg
     2521 tatcggcttt caacgcgtcg gcaagtgcga atgcgccgat gggtttgtta tcgactgaga
     2581 ccgcaacaat gcttgcaata tcccaaacgc cgtctaaaaa cttcggcaag gccagttcgg
     2641 caaattcggc tttgcctgct ttcaccaaac ccacgccttc cacttcggcg gtaatgcctg
     2701 cgccgacaac ggtttgtgcg ttttgtgcgg cgggaatgtc caaaccgcgc gcttgggcgg
     2761 cggagacgat ggcacgggcg agcggatggg cggcgttttg ttcgacggcg gcggcgatgc
     2821 ggtacaaagc gtcttcgtca aagccgctgt cgggaacgca ataaacggcg gcaacctgcg
     2881 ggctgccttc ggtcagcgta ccggttttgt ccaacacgac ggcatcgacg tgggcggctt
     2941 cctccattgc tgccgcgtct ttaaaccaaa taccgtgttt aaccgctttg cccataccga
     3001 ccataatcgc ggcaggggtt gccagaccca gcgcgcacgg gcaggcaatc accaaaacgg
     3061 cgacggtgtg catcagcgca accgtccaat cgcccttaat cagccaagta acaataaaag
     3121 tcaacaacgc aatgcccacg acggcaggca cgaataccgc agccgcttta tcggctacgc
     3181 gcgcaatcgg tgctttactg ccttgtgctt cagagagcgc gttcatcatg tcgccgagct
     3241 gggtttggct gccgagctgc gtggcgcggt acaccacact gccttcggtc attaacgcgc
     3301 ccgccaacac tttgccgccc gccttttttt cttcaggatt ggattcgccg gtaagatggc
     3361 tctcgtccgc ccaaccgctg ccgctttcaa tgatgccgtc tgcggcaatg cgttcgccgt
     3421 ggttggcgcg gataaggtcg ccgatttgca cttggtcgat gggaagctgt ttccattcgc
     3481 cgttgcgttg cacgttgact tgggttggtg taagtttgag cagcaagccc aagctgttga
     3541 ggctggattt tttggtacgg tgttccaaaa atttacccag tgacacaaaa ccgatcacca
     3601 tcacgcccac ttcaaaatac acatgcgcca taccgtacgc cgcgtgcggg ctgaaaaaca
     3661 gcatatagac ggaatacagg taaatcgaga ccgtgccgat ggtaaccagc acgtccatat
     3721 tcgccagtcc gcccttaatg ctcgcccacg cgcttttgta aaacgggatt gccagccaaa
     3781 gctgcaccac gcttgccaat gcgaactgcc acaacggcgg aatcatccaa tcgtgtctgc
     3841 cgatcatcat ccccgccatg ccgataagga acgggacgtt gatggtgaac agcagccaca
     3901 gccgccagcc gatatggtgt tctgcttcgg gttgcggcaa tgtatcttcc gttttttcct
     3961 tcgcgccgta accggttttc tcaatgattt tggcaatgtc ggctactgag gttttgctgt
     4021 cgtcaaacac tacctgcgcc tcttcgctgg cgaagtttac ccccgccgat tcgacaaaat
     4081 cttttttgtt caacactttt tcaatgcgcg aagcgcaggc ctggcaggtc atgccttcga
     4141 tttggaaacg gattttttgt tgcataagcg tgattcctgc tttgatattc agacggcagt
     4201 taaggctgcg ggatgccgtc tgagcgccgg tatggtcgaa atttctcaaa cgcgccgata
     4261 attcgagtag aatccgaaaa cttgacacag caaaggaaaa acaatgtccc aacaccgcaa
     4321 actgattatt ttgggttccg gccccgccgg atacaccgcc gccgtctatg ccgcgcgtgc
     4381 caatttaaac cccgtcatta ttacaggtat cgcgcaaggc gggcaactga tgaccaccac
     4441 cgaagtggac aactggcctg ccgatgccga cggcgtgcaa gggccggaat tgatggcgcg
     4501 gtttctcgcc cacgccgaac gtttcggaac ggaaatcatt tttgaccaaa tcaacgccgt
     4561 cgatctgcaa aaacgcccgt ttacactcaa aggcgatatg ggcgagtaca cttgcgatgc
     4621 cctgattgtc gcaacaggcg cgtccgccaa atacctcggt ttgccgagtg aggaagcgtt
     4681 tgcaggaaaa ggcgtttccg cttgtgccac ctgcgacggt ttcttctaca aaaaccaaga
     4741 tgttgccgta gttggcggcg gcaatacggc agttgaagag gcactctacc ttgccaatat
     4801 cgccaaaacc gttaccctga tccaccgccg cagcgagttc cgtgccgaaa aaatcatgat
     4861 cgacaaactg atgaaacgcg tggaagaggg caaaatcatc ctcaagctgg aaagcaacct
     4921 gcaagaagta ctgggcgacg atcggggcgt aaacggcgca ttattaaaaa acaacgacgg
     4981 ttctgagcaa caaattgccg tcagcggcat ttttatcgcc atcgggcaca agccgaatac
     5041 cgatattttc aaaggtcagt tggaaatgga cgaagccggt tacctgaaaa ccaaaggcgg
     5101 cacggcggac aatgtcggcg caaccaatat cgaaggcgta tgggcggcgg gcgacgtaaa
     5161 agaccatacc taccgtcagg cgattaccag cgcggcttcc ggctgtcagg cggctttgga
     5221 cgcggaacgc tggctgggca gccaaaacat ttgaatgccg tctgaaaccg aaattttcgg
     5281 cggaatgcaa atttttcgca ccaaatcctt gattccgtcg gcaaacccca atataatgcc
     5341 tgctctttga accttgcttt ctgctttcgc atggcagaag gctgttttta ccatccataa
     5401 ggagataaca tgcgtcatta cgagatcgtg tttatcgttc atcctgatca aagcgagcaa
     5461 gtgcctgcta tggttgaacg ttacaaaacc atgattgccg aagcaaacgg taagattcac
     5521 cgtttggaag attggggtcg ccgccaactg gcttacccga ttaacaaaat ccataaagcc
     5581 cattacgttt tgatgaacat cgaaaccact cccgaagtgg ttgaagagct ggaaaccgca
     5641 ttccgcttca atgatgccgt attgcgccat ctaaccatca aaaccaaaca cgccgttacc
     5701 gaagcatccc ctatgttggg tggtgaaaag gctaagaacc tgttgagcgg tgcgtctgaa
     5761 gaagcggtcg cccaataatt gggattcaat aatcttgttt cgcttgccgc gttaattgaa
     5821 aaggttttcc ctattcgata tacgcctgcc ggaatccctg ttttagatat tattttaaag
     5881 cacaaatcgt ggcaggagga aaacgggcag caatgccttg tccaattgga aattccggca
     5941 cggattttag gcaggcaggc ggaagagtgg cagtatcggc aaggtgtata tgttcacgtc
     6001 gaaggttttt tagctcaaaa aagcagacgt tcccttatgc cgatgctcag gatacaaaat
     6061 attcaagaat ataaaggtta aacgacaatg gctcgtcaat cattcaaacg tagaaaattc
     6121 tgccgtttca cggctgaaaa aatccaagaa gtcgattaca aacaagttga tttgctgaaa
     6181 gactttatct ctgaaaacgg taaaatcatt cctgcacgca tcacaggaac gaaggcattc
     6241 taccaacgcc aattggctgt tgccgtaaaa cgcgcacgct tcctggctct gctgccttac
     6301 accgaccaac acaaataatt ttggagattg aatcatgcaa attattctgt tagaaaaaat
     6361 cggcggtctg ggcaacttgg gcgacatcgt aaccgttaaa aacggctacg cccgcaactt
     6421 tctaattccc gcaggtaagg caaaacgtgc gaccgaagcg aatatgaaag agtttgaagc
     6481 acgccgtgcc gaattggaag ccaaacaggc tgaaattttg gcagatgccc gagtccgtca
     6541 ggaaaaattg gacggtcaaa ccgttaccgt tgctcaaaaa gccggtgtgg acggccgcct
     6601 gttcggttcc gttaccaatg ccgacattgc tgctgcaatc gttgctgccg gcatcgaagc
     6661 cgtgaaagca aatgtacgtc tgccgaacgg tcctctgaaa gccgttggcg agtacgaagt
     6721 ggaagtggct ttgcacactg atgccgttgc taaaattacc gttgccgtcg ttgccgcaac
     6781 cgagtaattg aaattatcag atgccgtctg aaaccctgcc gattgtcgga atgtggtttc
     6841 agacggtatt tgttttgttt tccgtatatt ctgcaaaaat cgggatggtt gtttttatag
     6901 tggattaaat ttaaaccagt acagcgttgc ctcgccttgc cttgccgtgc tatctgtatt
     6961 gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actatatttg cctgtggtct
     7021 ttgcaggaat agtttgttaa cgaaatttga tgcataaaat gcgccaaaaa atattggctg
     7081 tgttttaata tagtgttgat aagcgtacct ggcttcaata tactcaatag gatagatctc
     7141 ttcctaaccg aaaaaataat tgtcttttcc cttgcaaata attgaaatca acagattact
     7201 aaaacacagc caaaatattc aattgacaaa aacttttctg attttgagaa atctgtgaaa
     7261 atcaggggat tatttatttt gaaaatggta tcgggcataa aatttggctg tgtttcaata
     7321 tggtgctgat aacatacttt gtttcaaaat gttcaatagg ataacttcct gattgaccga
     7381 aaaataatgg ccttttccct tgcaagcagt tgaaatcaac agattgtcaa aatacatcct
     7441 aaaaatttaa taacttatat atatgattgc aaaggttgcg gcttgtatac cggtcattat
     7501 ggcggaaata ccgtttggga ggcagccgca tcgcgtggaa tcggcacggc aggcgatgcg
     7561 ccgatgcctt cgggcgtgaa ggcggggcaa tcggcagttt ggaaaaaggc aatggaatct
     7621 gtgggcagaa gaagttaagg gtaaaagtcg ggcgcacggt caggttgtct gtccttttgt
     7681 cggaacagga gactgggcag ctttgtcctg attaattgct tgtgcaaacg gtaaaaaggt
     7741 tttttcgtgt gttttaaagc aggttgtaca gcatttttcc ggcaatcaaa agcaacataa
     7801 tgccgaagga ttttttgagt ttggcagaag aaagtttgtg ggcggttttg acaccgagcg
     7861 gggcaaaggc aatggttgcc gcgctgagga cggcgacggc gggcaggtaa aggaagccca
     7921 gtgacccttc gggcaatcct gcaatattca ggccgttgag cagatacgat attgcgccgg
     7981 agagtgcaat cggccaggca aggccggatg atgtgccgat ggctttatgg gcggggaagc
     8041 cgcagtggat taagaagggg acggaaagtg aaccgccgcc tatgccgacc cagctcgaca
     8101 ttgtgccgaa cagtgtggaa accgcagtca gtccgggcag tccgggcagc gggcgggatg
     8161 ccgtctgagg gtcggtatgc agtgttttga atgcgacggc ggttaaaaac aggatgaaga
     8221 aaatttgaag cccgaacgcg gggatatatt ttgcggagag tgcgcccgtg aatacgccga
     8281 atatcatacc cggcatcatc gcaaatacgg ttttccagtc gaccgcctgt tttttgtgct
     8341 gccccaacat actggaaaag gcggtgaaga ccatgacggc gaaggatgtg ccgacggcga
     8401 ggtgttgcgc gtaaggatgt tgtgccaaac cctgcaaatc aagtacccat aaaacgacag
     8461 ggacaatcag cgtgccgccg cctacgccga acagaccggc aataaaacct gccgcactgc
     8521 ctacggcaag caggattaag ataatgtccc aatgccacat ttaatccgcc tttctgtatt
     8581 ttttccagaa tcggcgtgcc gccataatgt agccggacag gctgtatccg agaaagaaca
     8641 ggaagaggac gagcgacggt tcccaagtga ccagaagcag caataagacg gcaagcagca
     8701 ttccgacaaa ggggacttgt ctgcggatgt tgatttcttt aaaactccaa aaagggattt
     8761 ggacaatcat cgacaggccg gcaaacagtg tgatgcccaa tgcccaccag tggacggcgg
     8821 ggaatttttc gacgctgtgg ttgacccaaa tcagcccgac aatcagcgcg gcggcagtcg
     8881 gactgggcac gccgataaac cagcgtttgt ccaccttgcc gatgagtgtg ttgaacaggg
     8941 cgaggcgcag ggcggcgcag gcgcagtaga tgaaggcgac ggaataaccg attttgccga
     9001 actgccaaag ctgccatttg taggcaatca gagcgggagc aacgccgaag ctgaccatat
     9061 cggcaaggct gtcgagctgc tccccgaacg cgctttggct gttggtcagc cgcgccacgc
     9121 gcccgtccat accgtccagc aacatagaga tgaataccgc gatggcggcg gtttcataac
     9181 gtccgtgcat ggattgggtg attgcgtaaa atgcggaaaa cagcgcggcg atggtaaagg
     9241 agttgggcag caggtagata ctgttttgac gcagggagcg ttgcggggtg ttggtcgggg
     9301 tttccatagc tgaagtgtct cacggacgtg gagaatcgat aggggattat aacccaaacc
     9361 attatcgaac aatacgccct ttaggatgaa gccctcggag gcggtttgtt tttctgatgg
     9421 cggatgcttt gcggggcggt ttgactctgc ctgccaccgg gtgtgttgtt tcggattttt
     9481 gccggatgga tattgttgct gggcatttct gggcttgccg gaaggtatcg gggggagggc
     9541 atcggaatat gcggcgcacc gttcaaaccg gggcggcgtt tccctatttt cagggggttg
     9601 caggtttcaa caaattgaaa gatatttttt gcatttccga ccgtatgctg attttgaagc
     9661 gggataaatt ataggacaag gtttttcgcc cgccgcaaag gttggccgca atgccgtctg
     9721 aaaacaacgg cttgccgcta aggcggcggt atgcggattt gcgctgccga aatcggtttg
     9781 ccatacccgg cggtgcaatc tgcggggagg gataagccga taaggcggga cttatcctgt
     9841 tttttgttta taatgcaaca gaatttggac gaaccgtcgg gaatttatca tgatgaaaaa
     9901 gatactggcc gtatcggcac tatgcctgat gactgcggcg gcacgggctg ccgatactta
     9961 cggctatctc gccgtttggc agaatccgca gaatgcggac gatgttttgc aggttaaaac
    10021 tacaaaagaa gattcgacga aaagcgaagc gtttgccgag ttggaagcct tttgcaaagg
    10081 tcaggacacg cttgcgggca ttgccgaaga cgagccgacc ggatgccggt cggtcgtgtc
    10141 gctgaacaat acctgtgtcg cgctggcata cccgaaagcc ttgggcgtga tgcgcgttga
    10201 aaacgccgtc gtgattactt ctccgcgttt tacgagcgtt catcaggtcg cactcaacca
    10261 gtgcatcaaa aaatacggcg cacagggaca atgcggcttg gaaacagtgt attgcacgtc
    10321 ttcttcttat tacggcggaa ctgtgcgctc tttgattcaa aatctcaaat aaaacggaaa
    10381 atgccgtctg aaagatgttc agacggcatt tctatatcga cggtcaggat tctttcggat
    10441 cgggcagcag gctgttcaac ataatggcaa gtacggcgca caagcccacg ccggcaaagc
    10501 tgaagctgcc caatttgagc gtcatgccgc cgatgcccgt ggtcagtacc gagctgacga
    10561 tgaccaggtt tttcggcagc atcaaatcga ctttggcatc aatcagcgtt ttcacgccca
    10621 aagaagcaat cgtgccgaac agcagcagca taatgccgcc cattactggc atcggaatgg
    10681 aagccaaaaa cgcattgaat ttgccgaaaa acgccatgca gacggcaaaa accgccgccc
    10741 aagtcatgat gacggggttg ctgtttttgg taatcattac cgcacccgtt acttcgccgt
    10801 aggtcgtaac cggcgggccg ccgatcagac ccgcaacgca tacgcccaaa ccgtcgcctg
    10861 caagggtttt gtccaagccc gggtctttcg tatagtcttt ccccgtcaca ttgccgattg
    10921 ccatgatgcc gccgatgtgt tcgatggcgg gggcgacggc aacgggcagc ataaacagtg
    10981 cagcctgcca gttgacctga ggcgtttcaa aatggggaac ggcgaaccag ggcgcgtgtg
    11041 caatgcttgc cgtgtccacc agtcccatca gcagtgccaa aacataaccc gaagcgacac
    11101 cgatcaagat aggaatcagc ttcatcatcc tgctgccgaa aaccgatacg atggcggtaa
    11161 cggcaaaggt aaagccggaa agaatcagcg aatcggtata gtcgatgacc tgtttgccgt
    11221 ccgcctgacc cattgccatg ctgcttgccg ccacggcaac agacagaccg atgaccatga
    11281 tgacggggcc gatgacgacc ggaggcagca gtttgtgtac cgctgccagt ccgcgccaac
    11341 ggatcagcgc ggcaaacaca aaatacataa agccggcggc aaacagtccg aacatggtgg
    11401 aaggcagccc ccattcgccg acggagtaga taatcggtgc gataaaggca aacgaagaac
    11461 caagaaaaat cggcactttg cgtttggttg tgatttggaa cagcagcgtt cccaagcctg
    11521 cgcccaaaag cgcaagagcc ggattcagac cggtcagcag gggaaccagc accattgcgc
    11581 cgaatgccac aaataaaatc tgtgcaccgg aaacggcaag tttcagttgg tttataccat
    11641 cttctttcaa tcggttcaaa cggcacggat tatactggtt tgccgagggt ctgcgtaaaa
    11701 atacatatgg cgggcaacag atatgccgtc tgaaaggcaa tgtctgtctg ttgcaggatg
    11761 aaagcaggag aaatggagta taatccgaca ctttccatat tcaatccgca agccgtccgg
    11821 cttccttatt tcagacggca ttttccggta atacggcatg acagaaaaat cccataaaaa
    11881 aacagcaaaa ggcagggcgg gaagcccgtc cccaacgtcc gcacgcaaca agaaagccga
    11941 caacggcgca cggggcaata aagtttccga gcggctcaag gcggtcaaag agttgcagaa
    12001 aaccgaaacc aaaaaggcgc gtcccgaaca tgtcgtcaac cttatcggcg acgcactgtg
    12061 gctgatgggt ttggcggcaa ccctgtattt ggcgatttcc ctgatcagtt tcgatatggg
    12121 cgatccgtct tggtcgcaca gttcgccggt tgtggaagat gtcgccaatt ggggcggact
    12181 gttcggcgcg tatgttgccg atgtcggcta ttatcttttc ggctggtcgt tctggtggtg
    12241 gatagcggct gcctgcgtca tgctgtataa aaattttcgt ctgcacgcaa aacagacgga
    12301 aaacgaggca tacaaccaca aaatcgctgc cgccgcgctg tttgtcctga cggtcttcag
    12361 ccccgtcttg gagtattttg tgctgggcgg aaaatatgcc gactccctgc ctgtcggagc
    12421 aggcggtatg gtcggcatac gcgtcggcgc agtgtttgcg tggctgctgg ggaaatcggg
    12481 cagcctgctg attatcttgg ttgttctgct gttgtcgttg tccctgctgg tgcagatttc
    12541 atggctggaa tttttgaacg gtgcgggcag ggcggttcaa aaccgcctga gtgccttatc
    12601 cggcaaggtc atggctttag gaaaacgccg gccgaatagc aaaacagacg gtgtcgatac
    12661 ccaaaataca cggcgcatgg taaaagaagc caagaatatt acggccaaac ccgttgcctt
    12721 gcccgaaggc agcagcagca accgcaaatc cgtcgcggtt tccgtcgcgc cgtcgcccaa
    12781 aattcaggtt tctctgtttg aagatgacga acctcggcag gcgggcgaat accacaagcc
    12841 tacattgaac ctattgcgga ttcctgacag cgaacccgtc agcatcaatc ccgccgaatt
    12901 ggagcgcact gccgaactga tcgaatccaa actggcagaa ttcggcatcg gcgtacaagt
    12961 cgtatccgcc acatccggtc ccgtcatcac gcgctacgaa atcgaacccg cgcaaggtgt
    13021 taaaggcagc caaattgttg ccttgtcgaa agatttggca cgctctatgt cgctgcaatc
    13081 cgtgcgtatc gtcgaaacca tcgcaggtaa aaacacgatg ggcatcgagt tgcccaacga
    13141 caaacgccaa gacgtgatgt tgagcgaaat cttgtcctcg cccgtgtttg ccgaagccaa
    13201 atccaagctg accgtcgcgc tgggcaaaga cattgccggt acccccgttg tcggcgactt
    13261 ggcgaaaatg ccgcaccttt tggtcgccgg tatgactggt tcgggcaagt ccgtcggcgt
    13321 gaacggcatg attatgtcta tgcttttcaa agctacgccc gacgaagtcc gctttatcat
    13381 gatagacccg aaaatgcttg agttgagcat ttacgacggc attccgcacc tgctctgtcc
    13441 cgtcgtgacc gatatgcgcg aagcggggca ggcgttgaac tggtgcgtcg ccgaaatgga
    13501 aaaacgctac cgcctgcttt cccacgccgg tgtacgcaat ctggaaggct tcaaccaaaa
    13561 agtcgaagcc gcaaaagcgg caggcaagcc gctgctcaat ccgttcagtc tgaaccccga
    13621 cagccccgag cctttggaaa aactgccgat gattgtggtc gttatcgacg aacttgccga
    13681 cctgatgatg accgaacgca aagccgtcga gcagcaaatc gcccgtctcg cccaaaaagc
    13741 gcgcgccgcc ggtatccata tgattgtcgc cacccaacgt cccagtgtcg atgtcgttac
    13801 tggcctgatt aaagccaaca tcccgacgcg tatggcgttt accgtgcaaa gcaaaatcga
    13861 cagccgtacc atcctcgacc aaatgggcgc ggacgaactg ctcaaatatg gcgattcgct
    13921 gttcctccag cccggcagtg ccgaaccgac ccgcctgcaa ggcgcgtttg tttcagacga
    13981 cgaagtacat caagtcgtca actacgtcaa atcgcaagcc ccagccgact atattgaagg
    14041 tctgctcagc ggcgaggccg cgctggaaac tgccaatatc gttaatccga atgcagacag
    14101 cgacgaattg ttcgatcagg cagtcgccta tgttttggaa agcaaaaaaa cctccatttc
    14161 gtctttgcag cggcagttgc gtatcggcta taaccgcgcg gcaaacctga tggaggcact
    14221 ggaaaatgcg ggtgtcgttt ctcccaccga cctcaacggc agccgtaaaa ttttggcgca
    14281 caaggaccat ttgtagcccg tattgcaaaa tgccgtctga acggcggaat tggcgtttca
    14341 gacggcatat tatgtttcag gcggaacatt gtgatatact tgccagctaa aatctcccct
    14401 ttgcggcaat gcggttcaaa tatccgtacc gttgcgctgt ttgcttcccc atgcagggaa
    14461 gaaggtttac cattttatca acacaacaaa tttaagggct tatgatgagc gtaactgttg
    14521 aaactttaga aaatctggaa cgcaaagtag tgttgtccct gccttggtcc gaaatcaacg
    14581 cagaaaccga taaaaaactg aaacaaaccc agcgccgtgc aaaaatcgac ggtttccgcc
    14641 cgggtaaagc acctttaaaa atgattgccc aaatgtacgg tgcgagcgcg caaaacgacg
    14701 tgatcaacga gctggtgcaa cgccgcttcc acgatgttgc cgttgcccaa gagttgaaag
    14761 tggcaggctt cccccgtttt gaaggcgttg aagaacaaga cgataaagaa tctttcaaag
    14821 ttgccgccat ttttgaagtg ttccccgaag tcgttatcgg cgatttgtct gcacaagaag
    14881 ttgaaaaagt aaccgcttcc gtcggtgatg ccgaagtgga ccaaaccgta gaaatcctgc
    14941 gcaaacaacg cacccgcttc aaccatgtcg aacgcgaagc ccgaaacggc gaccgcgtca
    15001 tcattgactt tgaaggcaaa atcgacggcg aaccttttgc aggcggcgca tccaaaaact
    15061 acgccttcgt attgggcgca ggtcaaatgc tgcctgaatt tgaagccggc gtagtcggca
    15121 tgaaggctgg cgaaagtaaa gacgttaccg tcaacttccc tgaagaatac cacggcaaag
    15181 acgttgccgg taaaactgcc gtgttcacca ttacgctgaa caacgtttcc gaagcgactc
    15241 tgcctgaagt cgatgcagat tttgcaaaag ccttgggtat tgcggatggc gacgttgcca
    15301 aaatgcgcga agaagtgcag aaaaacgtaa gccgcgaagt ggaacgccgc gtaaacgaac
    15361 aaaccaaaga atccgtaatg aacgcgctgc tcaaagccgt agagctgaaa gcacctgttg
    15421 ctttggtcaa tgaagaagcc gcacgcttgg caaacgaaat gaaacaaaat tttgttaacc
    15481 aaggtatggc tgatgctgcc aacttggatc tgcctttgga tatattcaaa gaacaagccg
    15541 aacgccgcgt gtctttgggt ctgattttgg ccaaactggt tgatgaaaac aaactggaac
    15601 cgactgagga gcaagtcaaa gccgttgtcg ccaacttcgc agaaagctac gaagatcctc
    15661 aagaagtaat cgactggtac tacgcagagc cttcccgcct gcaagccccg acttctttgg
    15721 cgatagaaag caacgtcgtt gatttcgttt tgggtaaagc caaagtaaac gaaaaagctt
    15781 tgtcttttga cgaagtgatg ggtgcgcaag cctgattatc ctgaaaatgc cgtcttaggg
    15841 cagtttttga aagcaccgaa gccgctttta aagcccgctt tggtgctttt acatcatgaa
    15901 aggagacgaa atgtcttttg ataactatct tgtccctacc gttatcgagc agagcggtcg
    15961 cggtgagcgt gcattcgata tctattcccg gcttttgaaa gagcgcatcg tattcttggt
    16021 cggtccggta accgacgagt ccgccaatct ggtggttgcc caactgttgt ttttggaaag
    16081 tgagaatccg gataaggata ttttcttcta tattaactcg ccgggcggtt cggtaacggc
    16141 cggtatgtcg atttacgaca ccatgaattt tatcaagccc gatgtatcga ctttgtgctt
    16201 ggggcaggca gcaagtatgg gcgcgttctt attgtcggca ggcgaaaaag gcaaacgttt
    16261 cgccctgccc aacagccgga ttatgattca ccagccttta atcagcggcg gcttgggcgg
    16321 tcaggcatcc gatattgaaa ttcacgcacg cgaactgttg aaaatcaaag aaaaactcaa
    16381 ccgcctgatg gcgaaacatt gcggccgcga tttggcagat ttggagcgcg acaccgaccg
    16441 tgataatttc atgtccgccg aagaggctaa agaatatggt ctgattgatc aaatcttgga
    16501 gaaccgtgct tctttacagt tttaataaga aatctgagag aaacaaatgc cgtttgaaaa
    16561 cagttcagga cggcatttgt cttataggga ctgtataggg atgattttgt tctggttgcg
    16621 tttggagccg ttttcgccat aattggtttt aacatattcc tctacaatag ctaggaattc
    16681 agttgcaata ttatcacctt tcagtgtgac tttgcgctcc ccgtccacat aaaccggcgc
    16741 gacgggtgtt tctcccgtac cgggcaggct gatgccgatg tcggccaatt tgctttctcc
    16801 gggcccattg acaacgcagc ccatcacggc aacattcagg gattccacgc ctggataagc
    16861 agtacgccat acgctcattt tttgtcgcag gtaattttga acatcttgtg ccagctcttg
    16921 aaatacggta ctggtggtac gcccgcagcc ggggcaggcg gtaaccatcg gcgtaaacga
    16981 acgcaatccc atagtctgta aaatctcttg cccgacgacg acctcctgag tacgcgggct
    17041 gccaggttcc ggagtcagtg aaatgcggat ggtgtcgccg attccttctt gaagcaagac
    17101 ggataatgcc gccgttgatg cgacaatgcc tttgctgccc ataccggctt cggtcaaacc
    17161 caaatgcagc ggataggcgc aacggctgcc cagttcgcgg taaacctgaa tcaaatcctg
    17221 aaccgcgctg actttgcacg acaggatgat tttgtcttcg ggcagtccca atagaacggc
    17281 tttttcggca gattccaaag cggagacaat cagtgcttcc ttcgtcactt cttcgggcgg
    17341 tttcggcgcg gaagaagcga ggttggcatc catcatacgt ttggcgaggc tttgatccaa
    17401 agaaccccag tttacgccga tgcggacggc tttatcgttt tcagcagcag tccgaatcat
    17461 aaaggcaaat ttttcatcgc cttttacgcc tttgccgaca ttgccgggat tgatgcggta
    17521 tttggacaat gctttgccgc attctggaaa ttccgccaac aggcgttcgc cgttgaagtg
    17581 gaaatcgccg ataagcggtg tggcatagcc catatcgtcc aagcggcggc ggatttcggc
    17641 aactttggac gcggcttcgg ggctgttgac ggtaatacgc accatttcgg atccggcatc
    17701 gctcaattcc ttaatctgca atgcggtggc ttttgcatcg gcagtgtcgg tgttggtcat
    17761 agattggata acgacgggtg cttctgaacc gacggtaata tgatcgatgc ggacttgatg
    17821 cgtcttgcgg cgttggagtg tgttcatatg gtttgaatct gtttattgac cggtgaggac
    17881 ggtttgcaat tcttccgagt aggggaaatt cgcctgcaat tgtgcttcat attcgtatgc
    17941 cgcctgtgcg ttgccgaggg ctttggcaat tttccagcct agcagcaaat catcggcctg
    18001 aaggacttct accctgcttt ggtatttttt aaagtagtaa tcggcatcgc ccaactgccc
    18061 ggccagcatt ttggtgcgcg ccagttcttt aaatgcgggt gggaactgcg gctgggcggc
    18121 gagggaacgt ttcaaatagg cttccgccaa tccgaattgc ccctgttttg cgctgcatat
    18181 gcctttattc aggttggcaa tataaggggt cgggtaggtg gggtcggcca gggctttgtc
    18241 gaaatatgcc atagattcgg cagggcggtt gagcctgccg cacaggaacc aaccgtagtt
    18301 gttgttgatt tcggcactgt cgggtttgat ggagagggct tgccggaaac ttttctgcgc
    18361 cttgtcgtta actttcaggt attggtagat ttcggcacgg accagccagg caagctcgtt
    18421 tttagggtct gatttcaggg cgtcttcaat acttgccgtc gcctgacggt agtcctgacc
    18481 gcgcatatat tccattgcca actgggtttt gatattggaa acctgattgg ctttttctgc
    18541 ccgcgagggg cggtaggaag tgctgcacgc gcccaaggca aggacaagta ataaagagat
    18601 tcgtttggat ggcttaaaag gcataattac ccctgttgtc cgattaaaat ctgctgccat
    18661 ttttgttggc ggcgcgtttt atcctgaacc tgccccgcca actgtccgca ggcggcatcg
    18721 atgtcgtcgc cgcgcgtttt tcgtacggta acgacaaatc ctgcctgctg caaaatatcg
    18781 cggaacacac ggatgttctc attgctggag cgttcgtatc cggagtttgg gaagggattg
    18841 aacggaatca gattgaactt gcagggaaca tctgtgacca gttcgatcag ttcgcgcgca
    18901 tgttgcgcct tatcgtttat tccgtccaac atgacgtatt cgaaagtgat gaaatccctg
    18961 ggtgctttga ccagatagcg ttggcatgcg gccatcaatt ctttcaaggg atattttttg
    19021 ttcaacggta cgatttggtt gcggacttcg tcattggaag cgtggaggga aaccgccaaa
    19081 gccaccggca tgacatcgcg caacctgtcc atttggggaa ccatacccga agtggaaacg
    19141 gttacgcggc ggcggctcaa accgtagccg tggtcgtcca gcatgatgct taaggcggta
    19201 acgacattgt cgaagttcgc catcggctcg cccatgccca tcatgacgac gttggaaatc
    19261 acgcgctcgt ttttcggtgt aacgcccatc gctttgtttg cccaccacaa ttgcccgatg
    19321 atttcggcag cagtcaaatt gcggttgaag ccctgccggc cggtcgaaca aaatgtacat
    19381 tccaaagcgc agccgacttg tgaggaaatg cagagcgtgc cgcgatccga ttcggggatg
    19441 aagacggttt ccaccccgtt gcccgtaccg acatccaaaa gccattttcg agtgccgtct
    19501 gaagattttt gagacatcat cagcttggga atttcgatgc ctgcctgttc gttcagttta
    19561 tggcgcaacg attttgccaa atcggtcatt tcgtcaaaat tttgcgcgcc ggattggtgc
    19621 atccaacgca taacctgttt ggcacggaaa ggtttttcgc ccatatcggc aaaatgtcgg
    19681 gtcagccctt ggaggtcgta gttgagcaga ttggttttca tgtatttgtg tttttcttaa
    19741 attaaggctt caaataaaaa attgcagggc aggcaagttt gatttgaagc cttttgcaac
    19801 agagttttca gacggcatgg atatatttta tgccgtctga agaggagttg tgcggtgtat
    19861 tgtatcaacg ggggcagatt tcggtttggc tgaaaaagta ggcaatttcc aaagcggcat
    19921 tttccggagt gtccgagccg tgtacggcat tgatgctgac cgaagtggca aagtccgcgc
    19981 gtatcgtgcc ttcggcggct tcggcgggat tggtcgcccc catcagttcg cggtttttca
    20041 gaacggcgtt ttcgccttcc agtacttgaa tcataaccgg accgccggtc ataaattcaa
    20101 ccaatccggc gtagaagggg cggtctttat gaaccgcata aaattcttgc gcctctttga
    20161 gggtaagctg cttcattttg gcggcaacga ttttcagacc gttctcctca aagcggctgt
    20221 atattttgcc gatgacgttt ttgccgacgg catcgggttt gatgatggag atggtacgtt
    20281 caatcgccat gctatatcct tatttttact taagaagaat caaatcggta ttctatcaaa
    20341 aaaataactt atccgcctga atccttggga gatagggtca ggtgcggctg ttccaaataa
    20401 acttcggact gcatttcgac catccggctg gcggtgcggg taaattcttc ggcaaaatcg
    20461 ccttccgtat agatatggtt gacatctacc gcgccggtgg cacacagttt gacccggaaa
    20521 tcgtagagta cgtcaatcag ccaagtcagc cgccgcgcct ccgccttttc ttgcggtgag
    20581 agttgttcca aacctgaaat aaaaaccatt tcataatgtt cggccaaata cagatagtcg
    20641 gactgtgagc gggggccgaa gcacagtgcg cggaaatcaa accatatggc acggccggac
    20701 tcggctttgt ggggaatctc ccgaccgtgg atggtgctga tgccggggtt caaatcggta
    20761 atgcctgtca tttctttgaa cagttttgcc agttttgcct cattttcttc attggcaggc
    20821 gtaaagaaaa tctcggcggg gcggagggta cgcagtcggt agtcttcacc gccgtcaacg
    20881 tttaagacgg tcaggctgga ctcgatgagc gcgattgtgg gaagaaaact gctccggttt
    20941 tgaccttgcg ggtagagttc ggaaggcgcg tagtttgaag tcgccaccaa aacaacgccc
    21001 tcgttaagca ggttttccag cagacggcct aaaatcattg catccgcaat atcgctgaca
    21061 tgaaattcgt caaaacataa tacgcgggtt tctttggcaa tctcggcggc aacggatttc
    21121 aacgggttgc tttcgctttt cagggttttc agcctctggt ggatttctgc cataaaggca
    21181 tgaaagtgga cgcggcgttt gcggcggtaa gggaggcagc cgaaaaaagc gtccatcaga
    21241 aagcttttgc cgcgtccgac cccgccatag aaataaagcc ctttggggac ttgcggggaa
    21301 cgcaaactcc tgcctaaaaa acggtttctt ttgcgtttga acatcatcaa ttcggtccaa
    21361 agccgatcga ggtgttcgat ggcggctgcc tgcgcgtcgt cgcggatgaa gttgggcagt
    21421 tgtgaggcag cctgatacca ggtcagcggg ctgtggtttt caaacggcgg ggctttaaaa
    21481 agttggtctc tattactcat atttaacctt gttatacttc ttgcggcgga gaaagaaaat
    21541 gcttaccgtc ggtattataa atgatttcct tcaaacttgg cattttccgt ggaaaagaat
    21601 aatgacgcgc acaagggggt ataagcaaag gcggcgtttc aatatggtgc agatatgagc
    21661 tcaaatgcct tttatagt
//
LOCUS       DAWKOX010000014        21545 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.014, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000014 DAWKOX010000000
VERSION     DAWKOX010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21545
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.014"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            111..269
                     /locus_tag="WJK78_000375"
     CDS             111..269
                     /locus_tag="WJK78_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597351.1"
                     /translation="MPSEHAFGRRFYNKNTSWRLVLCLSKFLCRAYLRISDGIGLCCL
                     KSVFRFSL"
     gene            351..1472
                     /gene="dnaJ"
                     /locus_tag="WJK78_000376"
     CDS             351..1472
                     /gene="dnaJ"
                     /locus_tag="WJK78_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ7597352.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
     gene            1668..3686
                     /locus_tag="WJK78_000377"
     CDS             1668..3686
                     /locus_tag="WJK78_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ7597353.1"
                     /translation="MNKSLSSSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPAAERAEQDLSPKAMIFWVLAMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGK"
     gene            complement(3729..4286)
                     /gene="rfbC"
                     /locus_tag="WJK78_000378"
     CDS             complement(3729..4286)
                     /gene="rfbC"
                     /locus_tag="WJK78_000378"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ7597354.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDEWFKTQVCERTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLPLSR"
     gene            complement(4340..5206)
                     /gene="rfbA"
                     /locus_tag="WJK78_000379"
     CDS             complement(4340..5206)
                     /gene="rfbA"
                     /locus_tag="WJK78_000379"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ7597355.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNRMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLSDEKLEELARPMAKN
                     QYGQYLLRLLKK"
     gene            complement(5312..6352)
                     /gene="rfbB"
                     /locus_tag="WJK78_000380"
     CDS             complement(5312..6352)
                     /gene="rfbB"
                     /locus_tag="WJK78_000380"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ7597356.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEF
                     IQTNIVGTFNLLEAARAYRQQMPSEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYA
                     PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLE
                     ELAPEKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQ
                     WYLDNKTRRQNA"
     gene            complement(6353..7396)
                     /gene="galE"
                     /locus_tag="WJK78_000381"
                     /pseudo
     CDS             complement(6353..7396)
                     /gene="galE"
                     /locus_tag="WJK78_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223275.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
     gene            complement(7389..8391)
                     /gene="dcm"
                     /locus_tag="WJK78_000382"
                     /pseudo
     CDS             complement(7389..8391)
                     /gene="dcm"
                     /locus_tag="WJK78_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
     gene            complement(8422..10695)
                     /locus_tag="WJK78_000383"
     CDS             complement(8422..10695)
                     /locus_tag="WJK78_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ7597357.1"
                     /translation="MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSRLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGINAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(10759..11409)
                     /locus_tag="WJK78_000384"
     CDS             complement(10759..11409)
                     /locus_tag="WJK78_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7597358.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP"
     gene            complement(11406..12203)
                     /locus_tag="WJK78_000385"
     CDS             complement(11406..12203)
                     /locus_tag="WJK78_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7597359.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(12203..13366)
                     /gene="ctrB"
                     /locus_tag="WJK78_000386"
     CDS             complement(12203..13366)
                     /gene="ctrB"
                     /locus_tag="WJK78_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ7597360.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(13381..14556)
                     /gene="ctrA"
                     /locus_tag="WJK78_000387"
     CDS             complement(13381..14556)
                     /gene="ctrA"
                     /locus_tag="WJK78_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HEZ7597361.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            14691..15824
                     /gene="neuC"
                     /locus_tag="WJK78_000388"
     CDS             14691..15824
                     /gene="neuC"
                     /locus_tag="WJK78_000388"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEZ7597362.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTYKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGAAVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            15828..16514
                     /gene="neuA"
                     /locus_tag="WJK78_000389"
     CDS             15828..16514
                     /gene="neuA"
                     /locus_tag="WJK78_000389"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HEZ7597363.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            16515..17564
                     /gene="siaC"
                     /locus_tag="WJK78_000390"
     CDS             16515..17564
                     /gene="siaC"
                     /locus_tag="WJK78_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HEZ7597364.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIS"
     gene            17716..20829
                     /locus_tag="WJK78_000391"
     CDS             17716..20829
                     /locus_tag="WJK78_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7597365.1"
                     /translation="MAVIIFVNGIRAVNGLVKSSINTANAFAEEGLDVHLINFVGNIT
                     GAEHLYPPFHLHPNVKTSSIIDLFNDIPENVSCRNTPFYSIHQQFFKAEYSAHYKHVL
                     MKIESLLSAEDSIIFTHPLQLEMYRLANNDIKSKAKLIVQIHGNYMEEIHNYEILARN
                     IDYVDYLQTVSDEMLEEMHSHFKIKKDKLVFIPNITYPISLEKKEADFFIKDNEDIDN
                     AQKFKRISIVGSIQPRKNQLDAIKIINKIKNENYILQIYGKSINKDYFELIKKYIKDN
                     KLQNRILFKGESSEQEIYENTDILIMTSQSEGFGYIFLEGMVYDIPILAYNFKYGAND
                     FSNYNENASVFKTGDISGMAKKIIELLNNPEKYKELVQYNHNRFLKEYAKDVVMAKYF
                     TILPRSFNNVSLSSAFSRKELDEFQNITFSIEDSNDLAHIWNFELTNPAQNMNFFALV
                     GKRKFPMDAHIQGTQCTIKIAHKKTGNLLSLLLKKRNQLNLSRGYTLIAEDNSYEKYI
                     GAISNKGNFEIIANKKNSLVTINKSTLELHEIPHELHQNKLLIALPNMQTPLKITDDN
                     LIPIQASIKLEKIGNTYYPCFLPSGIFNNICLDYGEESKIINFSKYSYKYIYDSIRHI
                     EQHTDISDIIVCNVYSWELIRASVIESLMEFTGKWEKHFQTSPKIDYRFDHEGKRSMD
                     DVFSEETFIMEFPRKNGIDKKTAAFQNIPNSIVMEYPQTNGYSMRSHSLKSNVVAAKH
                     FLEKLNKIKVDIKFKKHDLANIKKMNRIIYEHLGININIEAFLKPRLEKFKREEKYFH
                     DFFKRNNFKEVIFPSTYWNPGIICAAHKQGIKVSDIQYAAITPYHPAYFKSPKSHYVA
                     DKLFLWSEYWNHELLPNPTREIGSGAAYWYALDDVRFSEKLNYDYIFLSQSRISSRLL
                     SFAIEFALKNPQLQLLFSKHPDENIDLKNRIIPDNLIISTESSIQGINESRVAVGVYS
                     TSLFEALACGKQTFVVKYPGYEIMSNEIDSGLFFAVETPEEMLEKTSPNWVAVADIEN
                     QFFGQEK"
     gene            20910..21545
                     /locus_tag="WJK78_000392"
     CDS             20910..21545
                     /locus_tag="WJK78_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ7597366.1"
                     /translation="MYSEQGINNTINISTTSLTNATQLTVIGNNNSVYIGNNCKIVSS
                     NIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKD
                     CMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVV
                     GSHTVLYKSFKEPNCVIAGSPAKIVKENIVWGRKMYHSTMYDDPTLNEFYK"
BASE COUNT         5878 a         4858 c         4899 g         5910 t
ORIGIN      
        1 ggaacctgta aaggaagggg catcggctgc cgccggtgct tttttgtttg gaagggaaat
       61 ggctggaaaa agacctgcgc tatatcgggg aatgaatcga cgcaaaggaa atgccgtctg
      121 aacatgcgtt cgggcggcgt ttttataaca aaaacacttc atggcggttg gttttatgcc
      181 tgtctaagtt tttgtgtcgt gcatacctga ggatttcaga cggcatcggt ttatgctgtc
      241 tgaaaagtgt attccgtttc agtttgtaag ctatggcagt ctgtttgtct tgtgttttgc
      301 gtaattgccc ttattttgag ccgtgatttt attttgaatt agatgaaaaa atgagtaatc
      361 aagattttta tgcgacgctg ggtgtggcaa gaacagctac cgatgatgag attaaaaaag
      421 cctaccggaa attggcgatg aaataccatc ccgaccgcaa tcctgacaat aaagaggcgg
      481 aagagaagtt taaagaagta caaaaggcgt atgaaacttt gtccgacaag gaaaagcgcg
      541 ctatgtacga ccagtatggt catgcggcgt ttgaaggcgg cggacagggg ggcttcggag
      601 ggtttggcgg atttggcggt gcgcagggtt ttgactttgg ggatattttc agccaaatgt
      661 ttggaggcgg ttcggggcgc gcccagcctg attatcaggg tgaggacgtt caagtcggta
      721 tcgaaatcac gcttgaagaa gccgcaaaag gtgtgaagaa acgcatcaat attccgactt
      781 atgaagcgtg tgatgtctgt aacggcagtg gcgcgaaacc ggggacatcc ccggaaacct
      841 gcccgacttg caaaggttcg ggtacggtgc acatccagca ggcgattttc cgtatgcagc
      901 agacttgtcc gacctgccac ggtgcgggca aacacattaa agaaccttgc gtcaaatgcc
      961 gtggcgcggg gcggaataag gcggtcaaga cggtggaagt caatattccc gccggtatcg
     1021 atgacgggca gcgtatccgt ttgagcggcg aaggcgggcc gggtatgcac ggtgcgcctg
     1081 ccggcgactt gtatgtaacc gtccgcattc gggcgcataa gattttccaa cgcgacggtc
     1141 tggacttgca ttgcgaactg ccgatcagtt ttgccacggc tgctttgggc ggggagttgg
     1201 aagtgccgac cttggacgga aaggtcaagc tcaccgtccc caaagaaacc caaaccggca
     1261 ggaggatgcg tgtgaaaggt aagggtgtca aatcgttgcg cagcagcgcg accggcgatt
     1321 tgtactgcca tattgttgtc gaaacgcctg tcaatttgac tgaccgtcaa aaagagcttt
     1381 tggaagagtt tgagcggatt tctaccggct tggaaaacca aacaccgcgc aagaaatcgt
     1441 ttttagacaa gctgcgcgat ttgtttgatt gattttaagg ttcggaaaca agcagccgta
     1501 tcggggaatc tccttgatac ggctgttttt atttgtttaa aaatagtttt tattttcaat
     1561 ggggtatgag gcagggtggg ataactgttt ttaactgttc tttttaaaac ttgacatcat
     1621 ggcgtgatgc caacaatatg tgaacgtctg ttgtcaaagg aagaataatg aataaatctt
     1681 tatccagttc ggtagaagaa taccgcgagc tgacgctccg aggcatgata ctcggtgcat
     1741 tgatcactgt aatttttact gcgtccaatg tttacctcgg tttgaaagtc gggctgacct
     1801 ttgcctcgtc gattccggcg gcggtgattt cgatggcggt tttaaagttt ttcaaaggca
     1861 gcaatatttt ggaaaacaac atggtgcaga cccaagcttc ggcggcgggt acgctttcga
     1921 ccatcatctt cgtcctgccc ggtttgctga tggcgggcta ctggagcggt ttcccgttct
     1981 ggcagacgac gcttttatgt attgccggcg ggattttggg ggtgattttc accattccgc
     2041 tgcgttacgc gatggtggtg aaaagcgatt tgccttatcc ggaaggtgtg gcggctgctg
     2101 aaattttgaa agtgggcggt catgaagaag gggataaccg tcagggcggc agcggcatca
     2161 aagagctggc ggccggcggt gcgttggcgg gattgatgag cttttgcgcc ggaggtctgc
     2221 gcgtgattgc cgacagcgcg agttattggt ttaaaagcgg tacggcgatt ttccagctgc
     2281 cgatgggctt ttcactggca ttgttgggcg cgggctattt ggtcggactg acgggcggta
     2341 tcgccatcct gttgggcatt tcgattgctt ggggcattgc cgtgccgtat ttctcctcac
     2401 acattccgca accttccgat atggaaatgg cggcgtttgc gatgaagctg tggaaggaga
     2461 aagtgcgttt tatcggtgcg gggactattg gcattgcggc ggtttggacg ctgttgatgc
     2521 tgctcaagcc gatggtggaa ggcatgaaga tgtcgttcaa gagttttggc ggcggtgcgc
     2581 ccgctgcgga acgcgccgaa caagatttgt cgcctaaagc catgattttt tgggtgctgg
     2641 cgatgatgtt tgttttaggc gtgtcgtttt accactttat cggcgattcg cacattacgg
     2701 gcggcatggc ttggcttttg gtggtcgttt gcacgctttt ggcttccgtc atcggctttt
     2761 tggtcgccgc cgcctgcggt tatatggcag gtttggtcgg ctcgtcttcc agcccgattt
     2821 ccggcgtggg catcgtgtcc gtcgtcgtta tttcactggt tttgctgctg gtaggcgaat
     2881 ccggaggttt gttggcggat gaggctaacc gcaaattttt gctggcactg actttgtttt
     2941 gcggctcggc agtaatctgc gtggcttcga tttccaatga caacctgcaa gacttgaaaa
     3001 ccggctacct gctcaaagcc acgccttggc ggcagcaagt cgccctgatt atcggctgta
     3061 tcgttggtgc gctggttatt tcgcccgtgt tggaactgct ttacgaagcc tacggcttta
     3121 ccggcgcaat gccgcgcgaa ggcatggatg cggcgcaggc tttggcagct cctcaagcga
     3181 ctttgatgac gaccatcgcg tcgggcattt tcgcccacaa cctcgaatgg gtctacatct
     3241 ttaccggcat cgcgatcggc gcggtattaa tcgtcgtcga tttggtgttg aaaaaatcat
     3301 caggcggcaa acttgccctg cccgtccttg cggtcggtat gggtatttat ctgccgccgt
     3361 ccgtcaatat gcccatcgtg gcaggcgcgg tgttggcggc ggtgttgaaa cacatcatcg
     3421 gtaaaaaagc ggaaaaccgc gaaggccgtc tgaaaaacgc cgagcgtatc ggaaccttgt
     3481 tctccgccgg cctgattgtc ggtgaaagcc tgatcggtgt gattatggcg tttattattg
     3541 ccttctccgt gaccaacggc ggctcggatg cgccgcttgc gttgaatctg caaaactggg
     3601 atgccgccgc ttcttggttg ggtttggcgt tcttcgttac cgggatgttt ttctttgcac
     3661 agcgcgtact gaaggcgggc aagtaggctg tcggaaaaaa tgccgtctga agcgttcaga
     3721 cggcattttt atctggaaag cggaaggcgg agcttttcgg cttgcgccca cgttttgccg
     3781 gcaaggtctt tgggcgacag cagcggcgcg gtttgaagcg gccagcctat gccgactgtc
     3841 gggtcgttcc atattaaaac ctgttcggct tcaggcttgt aatagtcggt gcatttgtac
     3901 acgacttccg ccgcgtcgcc caaaacgcaa aacccgtgcg cgaagccttc gggtatccaa
     3961 agctggcatt ggttttgcgc ggacagggtt gcgcccgccc atttgccgaa agtcggcgaa
     4021 ccttcgcgca tatcgacggc cacgtcgaac acttcgccga caactacgcg tacgagtttg
     4081 ccttgtgtgt tttcggtttg gtagtgcagg ccgcgcaata cgcctttgcc ggatttggag
     4141 tggttttcct gcacgaaggt gcgttcgcag acttgggttt taaaccactc gtcgcggaag
     4201 gtttccataa aaaagccgcg cgcgtcgccg aagacttggg gctcaagcag ttttacgtca
     4261 ggaatggcgg tatcaatgat gttcatcttt ttatctttca tctaaaggcc gtctgaaaag
     4321 tttcagacgg cctcaaacat tattttttca acaggcgcag caaatattgg ccgtattggt
     4381 ttttcgccat cgggcgcgcc aattcttcca gtttttcatc ggaaagccaa ccgttgcgcc
     4441 aagcgatttc ttccaggcag gcgatgtgca ggttttggat gttttgcacg gtttggacga
     4501 acgaagccgc ctcgtgcagg ctttcgtgcg taccggtgtc cagccacgcg aaaccgcgtc
     4561 ccaatatttg aacggagagc gagccgtctt ccaaatacat ccggttgagg tcggaaattt
     4621 ccaattcgcc gcgtgcggac ggtttgagct gtttggcgaa ctcgacggcg cggttgtcgt
     4681 agaaatacaa gccggttacc gcccaatcgg atttgggccg ttgcggtttt tcttcgatgg
     4741 aaacggcgcg gaagttttcg ttaaattcaa ccacgccgaa acgttcgggg tttttgacct
     4801 gataagcaaa cacggttgcg ccgtgcgttt gcgctgccgc ctgtttcaat gtttgcgtaa
     4861 acgactgacc gtaaaaaata ttgtcgccca aaaccaagca aacattgtcg ttgccgataa
     4921 attcttcgcc gatgataaat gcctgtgcca agccgtccgg actgggttgc acggcataac
     4981 tgatggaaat gccgaaatcg ctgccgtcgc caagcaggcg tttgaaagag gcgttgtctt
     5041 caggcgcggt aatcaccaaa atatcgcgga ttcccgccag catcaaaacc gacaaggggt
     5101 aataaatcat cggtttgtcg tacacgggca ggagctgttt ggatacgccg cgcgtgatgg
     5161 ggtagaggcg cgtgccgctg ccgcctgcca gtatgatgcc tttcatcttt tctttcttcc
     5221 tttgcgatgg gttttcagat ggcattgcgt cgggatgccg tctgaaaact tattttccgg
     5281 tgcctaaacg ttccaaacga tagctgccgt tttatgcgtt ttgccgccga gttttgttgt
     5341 ccaagtacca ttgcactgtt ttgcggaggc cggattcaaa ggtttccaaa ggctgccagc
     5401 ccaaatcccg tctgattttc gccgtatcga cggcgtagcg ggcatcgtgg ccagggcggt
     5461 cttgtacgaa agtaatcaaa tcttcataac gcgccacgcc ggccggtttt tcgggagcga
     5521 gttcttccag cagggcgcag atggttttga cgacttcaat attggctttt tcattgtggc
     5581 cgccgatatt gtaggtttcg ccgacaacac cttcggtaac aacctgatac agtgcgcgcg
     5641 cgtggtcttc gacaaacagc cagtcgcgga tttgcatacc gtcgccgtac acaggcagcg
     5701 gtttgccgtc aagcgcgttc agaatcatca aaggaatgag tttttccgga aaatggtaag
     5761 gaccgtagtt gttggagcag ttggttacaa tggtcggcaa gccgtaagta cgcaaccacg
     5821 cgcggacgag gtggtcgctg gacgctttag aggcagagta agggctggac ggcgcgtagg
     5881 gcgcggtttc ggtaaacaaa tcgtctgtgc cgcttaaatc gccataaact tcatcggtag
     5941 aaatatggtg gaaacggaag gcttcgtgct tttcagacgg catttgctgc cggtaggcac
     6001 gcgcagcttc aagtaggttg aatgtgccga cgatattggt ttggataaac tcgcctgccg
     6061 aaccgataga gcggtcgaca tggctttccg ccgccaagtg catcacggca tcgggccggt
     6121 gttgtgcgaa tacgcggtcg agttcggcgc ggtcgcaaat gtccacttgc tcgaaagcat
     6181 agcggggatt atcggcaatg tcggtcagcg attcgagatt gcccgcgtag gtcagtttgt
     6241 cgaggttgac gacggaatct tgggtgtttc ggataatatg acggacaacg gcagagccga
     6301 taaagcccgc accgccggta acgaggatgg tttttttgtt tgcggtttgc atttagtccc
     6361 cgtatccgtc ggggttgcgg ctgacccaac gccacgaatc ctccatcatt tgtttcaaac
     6421 cgcgtttggt ttcccagccc gtctcttgtt tggtatggga cgggtcggca aaggaacacg
     6481 ccaagtctcc ggcgcgtcgg ggttggattt gatagggaat atttaagccg gatgcggcct
     6541 caaaggcacg gatgatttct aagacggaat aggcgcggcc cgaacccaag ttgaacaaat
     6601 gtacgccgga aaggccgcct ttcgccttca ttgccgcgac atggccttct gccaaatcca
     6661 tcacatgaat atagtcacgc atccccgtgc cgtcgggggt agggtagtca tcgccaaata
     6721 ccgccaattg cggcagtttg cctgccgcca cttggcagat ataaggcaac aaattattcg
     6781 ggatgccgtt tggctgctcg ccaatcaaac cactttcgtg cgccccaatc gggttgaaat
     6841 agcgcaacaa aatcacgctc caacgcggat cggccttttg gatgtcggtt aacatccgtt
     6901 ccaccatcgc tttggatgcg ccataaggat tagcggtatc gcccgggcgc atatcttccg
     6961 tatagggcat tttacgtatc atggcgcgac gcattaaagt aaacgccaaa gcgcgtttat
     7021 actggttatc cagtttccct atatttttac gttacaaatc aagttgttgg tattcatcgt
     7081 gaaaatagaa tttttcggca taacgctgac tcataaaacc ggcatgcggg ctgcctgaaa
     7141 aaatcattgc gacatcatcg tcatttaatg tttcatggtt gttttctatt aatgctaaag
     7201 caatttggta attaattgcc aaaatatcgt tagtaatcac acgatagccg cgttttttgg
     7261 cttcgtaggc aaaggaacag cctccactaa atacatctgc aactgtatct acatcagacg
     7321 gaagctggtc acaaatccag gaagctattt tctctttatt accgatatag ttaattttcg
     7381 gatattgctt attcattttc actcattttt aaaatacttt cagcaatagc ttttgccaat
     7441 aaaggcggta cggcgttacc aacctgctgc tgctgagcaa ttttgctgcc gcaaaaaata
     7501 aaattatcag ggaaagattg taaggcagct aattcacgaa cggttaacgc ccgattctgt
     7561 tcatagtgaa aaactttgcg catatctcct gtaatacaaa cggctggttt tgttgctgtt
     7621 gtaacggatg tatttacgga tatcacctgt tttcggacgt aatggttcag gaatatcgtt
     7681 acggttacct ccatttttaa caaatgccat tttttctaac atttgtgccg aatgattcat
     7741 agcttcatga tttgcaacgt gtggattgct ttcgccagca gccagttttg gaaaatgtcc
     7801 tattgctgat ccaacagtct gatgggaaat ctgcaaaggt tcgggaaagg aaattttgcc
     7861 tttatccctc ctcccgataa atatcactcg gctacgtatc tgaggaacac cgaaatcggc
     7921 tgcactcagt atcttacatt ccaccgaata accgatattc tgaaatgctt gaataatctc
     7981 aatacgtgtt ttacctgaat tgtgtgtata gagtcgcgct acattttcca taacaaaaaa
     8041 atatggttgg acaattttaa ctattcggac aaactcttta aataaatggt tgcgtgggtc
     8101 atctgtaaat gtccgtccaa tctttcctgc catactaaaa ccttgacaag gtggtcctcc
     8161 aataatcaaa tcaactgctt gtccgttaag acaattgatt aaatcttgtt cggttagtgt
     8221 ggttaaatct ttttgcagta attgatgatg ggggaagttg gtacggtaag tctgacaata
     8281 atcagactcc atttcaacag aaagcaattg ttggaatccg gcttgttcaa aacccaagga
     8341 taggcctcct gctcctgaga aaaggtcaat ataggtaagt ggtgtgtgca taagtcaaaa
     8401 tccataaact cttcgattat tttaccgctt cagcttcgca aacgcatccg ccatcgccga
     8461 attggctggg gcgcggtcgt tgcgttgggg tttgcggccg gctgtccgtt cgcggctgcg
     8521 gttttcagac ggcattttat gttttgcgcc gcccggttcg tcatccaagc gcatggtcag
     8581 cgcgatgcgt ttgcgtgcag catcgacttc cagcactttc actttcacca cgtcgccagc
     8641 tttcaccact tcgcgcgggt cttggacgaa cttgttggac agggcggaga tgtgcaccaa
     8701 gccgtcctga tggacgccga tgtccacgaa cgcgccgaag ttggcgacgt tggaaaccac
     8761 gccttcgagt atcataccga cttgcaagtc gctgatttcg tggatacctt cggcaaacga
     8821 tgccgtctga aactcgccgc gcggatcacg gccgggtttt tccagttcgg acaggatgtc
     8881 caaaatggtc ggcaggccga agcgttcgtc ggtgaagtcg gacgctttga tttgcttcac
     8941 gcgctcgcgg ttgccgatga gttcggcggc gttaatgcct tgttgcgcca gcattttggc
     9001 gacgacggga taggcttcgg ggtggacggc gctcgcgtcc aacggctctt taccgccgtt
     9061 aatccgcaaa aagcctgccg cctgctcgaa ggttttttcg cccaaacgcg gtactttcag
     9121 caattttttg cggctgtcga acgcgccgtt ttcatcgcgg taggcaacga tgttttgggc
     9181 aagggtttga ttcaaaccgg aaattcgcgc caagagcggg gcggaggcgg tgttcacgtc
     9241 cacgccgacg gcgttcacgc agtcttcgac caccgcgtcc agcgatttgg cgagccggct
     9301 ttggttcacg tcgtgctgat actgccccac gccgatggat ttggggtcga ttttgaccaa
     9361 ctcggcaagc gggtcttgta gcctgcgggc gatggacacc gcgccgcgca gggaaacgtc
     9421 caagtcgggg aactcgcgcg ccgccagttc ggacgcggaa taaatcgacg cgccggcttc
     9481 ggacacgacg attttatgca gccccatttt cgacatttca cgcaccagtt cgcccgcgat
     9541 tttgtcggtt tcacggctgg cggtgccgtt accgatggcg atgagcttca cgccgtgctg
     9601 tttaatcagg cgcgacagcg ttgccaacat attgttttct tgatgcaaat agacgatgac
     9661 ggtatccagc agcttgccgg tgtcgtccac cacggcgcat ttcacgccgt tgcggtagcc
     9721 ggggtcgaga cccagcgtgg tcagccgtcc ggcgggcgca gcaagcagca agtctttgag
     9781 attgcgggcg aacacggtaa tcgcgtcggt gtcggcggct tctttcaaac gattgagagc
     9841 ttcaagttcc aacgacaaaa agattttcgc gcgccaagtc aggcgcacgg tgtcgcgcag
     9901 ccatttgtgg ccgtctgaaa ctttgaagcg gcgggcgatg atttgctcgt attcgctttg
     9961 ctgcgtaatc ggcgtgtcgt cgggctgata tttgagcgcg atgttcaaca cgccttcgtt
    10021 gcgtccgcgc aaaaccgcta gcgcacgatg gctgggcatc gcacgaatag gttcgcggtg
    10081 gtcaaaataa tcgctgaatt tttcgccttc ggtttctttg cctccaacaa cttgcgcgtg
    10141 gatttcggct tcgttccaca gcttgtcgcg cagcgtgccg atgagttccg cgtcttcggc
    10201 aaactgctcc atcagaatcg cacgcgcgcc gtccaacgcg gctttggcat cggggacgtt
    10261 ttcgttcagg tagccttgtg cggcggcttc cacgtcctgc gactgctcgg caagcaacac
    10321 gtccgccagc ggctgcaaac cgtgttcgcg cgcgatttgc gctttggtgc ggcgtttggg
    10381 tttgtagggc agatacaggt cttccagcgc ggttttgtta tcggcggctt cgatttgcgc
    10441 cctgaggtcg tctgaaagct tgccttgctc ttcaatgctt tttaaaacaa cggctttgcg
    10501 ctcttccaac tcgcgcagat attgcagccg ctcggcaagc cggcgcaact gcgtatcgtc
    10561 caacccgccc gtcgcttcct tgcggtagcg ggcgataaac ggcacggtcg cgccgtcgtc
    10621 caaaagctcg acggcggcgg tgatttgcgc ggcagtcgcg gagagttctt gggaaagaat
    10681 ttgagtaatg ttcatcaata gaattccaac ggacaggccg tctgaaattt cagacggcct
    10741 gatttaaaaa caatcgcttt aaggcagcga attataatat tcgtaggctt tgtccatatc
    10801 ttcaaactgg tacatatgcc ctttttccag caccatcgca ttatcgcaat attgcttcat
    10861 ggcgctgtgg ctgtgcgaca ccaagatgat ggaacggtct ttgcgctttt caaacaactc
    10921 gtacttacat ttatcggcaa aacgcgagtc accaactgca atcacttcgt caatcaaata
    10981 gcaatcaaac tctaccgcca acgacaaagc aaatgccaaa cgcgccttca tacctgaaga
    11041 ataacgcttg accggctcgt aaagatattg ccccaactcg gaaaactctt cggtaaagtt
    11101 cttcacataa tcgatatcga cattgtaaat ccggcagatg aaacgcaaat tgtccatacc
    11161 ggtcagactg ccttgaaacg caccggagaa tgccaaaggc caagaaatac tcattgtccg
    11221 cttgatttca cccgtggtcg gcggctcaac gccactgatc aaacggatga gcgtcgattt
    11281 acctgcaccg ttgcggccga gaataccgat tttctcgccc ttctccattt tgaagctaat
    11341 atcgtgcaag actgtccgcc aaccttggcg ggtcagatag cgtttggaaa cgtgttcaac
    11401 tgaaatcatt gcggctcgac tcctttactg aatttactga ccatcgccaa gccaaacaac
    11461 aacaacacca gattgcacaa tacgatatac caaggatttt cataggtaat tacatcgctg
    11521 ccaaaatatc cggcacggaa catttctgtg ccatgcacca tcgggatcat caatgcatac
    11581 tcttgcactt tcggaggcaa attatgtaca aaaaagaatg cacccgataa cggcatcatc
    11641 acaaaagtca atgtgcccca aatcttgcca aacggctcga aattaaaggc aatcgaacaa
    11701 atcaccaaac ccaaaccaat cgcaaaaaaa gccatcaaaa gccaagccat cagcatataa
    11761 aacatatctg ccggcatttc aatccagcca atcgcaatca ataccgccat aatcacaatc
    11821 tgcgcaatgg ttgcaccagc aatttccaaa atcatgcgcg ccaagatggt atccaaaact
    11881 cttacattgc ggtgataaag caagctggca tttgaagaaa tcgacccaac tgcccgtttt
    11941 gaggcattac gccacatcat caacatcgga tagccagtaa tcgcaaatgc gacaatattc
    12001 aaagttgaat atcggtctgc ctttaaaaat ttccacatca agacgataac gaatgtcatc
    12061 agcaacggct caacaaacag ccataaaaag ccaatattat tgcgaccgta acgggtgata
    12121 atttcccgca tcaaaagcgc accgattacg cgcctttgaa tggctaaaga ttcccaaaat
    12181 gatgttttat gcaaggcttt catcagtttt tatgctcacg aatgctggca gtcaacaggc
    12241 tcaaaatacc ataaaccatc aagccgataa tcagagtggc aacaatgttg tataaccgtt
    12301 taggctcatg tgccaaatcc ggcaggctcg gttgcgagat cacttccaaa taaagctgct
    12361 gacggtctgc ttcaaccttg gcactttcca aagaagtcat ggcggctgcc aactgctgct
    12421 ctgccaactg gttttccaaa tacacacgct gatattcggc agcctgatta gacaacgaag
    12481 aatgcccacc gcccgaaatg gcacgtaact gttggtcaat ttctttacgc aagctctgct
    12541 cacgcgcctg caaacccgga atctgcggat tctccggagt gactgctttc acctgatcca
    12601 gctgggtttg aatcacaatc aattcatctt gcagcttgga aaccaacccc atttgcactt
    12661 ccgattgcgc tttcaaatca aaaacgccat tggcaatccg gtaatccgtc agattctgag
    12721 aggcttcctt tacccgctct gccgccgttt tcactacttc ttccgcatag cgcaccgtat
    12781 cagcacgtgc acgatcgttc aactggttaa tcaatgcttc accttgtttt aacaaagcct
    12841 cattgatttt cttagattcc agcgcatcaa aggaagttac attcaacgtg gaaatacccg
    12901 aaaccgtatc aaaattgatc atcacctgat ttttatagta ttgataaaaa gcctcttcct
    12961 cgccacggaa cccaaaccca ttaaagcggc tgaacgcatc acctttggtt tcataaaact
    13021 cacgcaccgg caagatttta cgcagttcat ccaaagacga gcgcgaacgc atatactccc
    13081 caaccgtgta aatatcatct tgcgcacggg caaaacctgt gccctgcaaa atggcaccca
    13141 ggccattgag agaagattgg cttttaggcg agcgcaccac aaagctcgat tgcgacgtaa
    13201 aacgatcgga agcgaagaag ccgaaataca ccaacgaaat taccgtaggg ataatcaccg
    13261 ttacccaaaa taaagggctt agctttttaa tccaactttt ctttttcggc tttttacgct
    13321 cggctttggt ttcagtggca actgccacag gaagttgctc agacatctta cttactcaca
    13381 ttaattagtt aaattattaa tactgttcgc gccactggta accggcgaga acacaaacga
    13441 caaaaatttc tgcacttcag ccaacggcgc attcgacaca tacaatacat ctttattctt
    13501 cacaggaaag cgctgcatag aaaatagcga atgcgcatca gccatattca cacgatatac
    13561 cgttggaatc tctgcctcac tgccataacc ttgagcaatc catttatcct gacgttctgc
    13621 cggcaattcc accaatggcg tatagcggaa cacaaacaca ccacgcgcat cagaacggcg
    13681 atcttgcaaa ccgcccatac ggccaatggc ttcagaaagc gataagcctc tggctgaaaa
    13741 accgatttct tgtgttctcc ccaccgcacc catagacgta aaggtatagg gattggtaat
    13801 catggtaacc acatcaccgc gacgcagcaa aatattttgt cgcggatttg caactaaatc
    13861 ttccaaggca acagttcgta ctacattgcc acgtgtcagc tgcacattcg tatcctgcac
    13921 atttgccgtt gaaccaccta ccgcagccac cgcatccaac acacgctcac cggctgccgt
    13981 cagcggcata cgcacactat tcccagcacg aatcaccgac acattcgccg cattattctg
    14041 caccaaacgc accatcactt gtggctgatt ggccattttt ttcaggcggc ctttaataat
    14101 ttcctgaacc tgaccaggcg ttttaccgac caccgaaata tcgccaacaa acggcacaga
    14161 aaccgtacca cgtgccgtga ccaactgctc tggcaactta gtttgatgcg cactacccga
    14221 gcccatcgaa gaaaggccac caccaaacaa tactgccggc ggcgcttccc aaatcataat
    14281 atccaataca tcaccaatat ttagcgtacc agccgaagca taaccatcgc caaactgagt
    14341 gaatgactga tttatctgag ccttatataa taactgagca accgtatgat tcacatcaat
    14401 cagctccact tcgggaattt gaacttcaga ttgttgccct aaagagacaa ttttttttgc
    14461 gctggggcct gatgaaggaa tcgcagagca tcctacaatt aaacttccac acaataataa
    14521 tactgcgtga cgaatataaa atttcacttt aaacacaagc caaatcctaa tataattata
    14581 aatggcctaa ttatagcact taatcgaaat aaatttatga gtacgtagag tataattagt
    14641 attcttcttt ccaacttcct tatacttata tacttataga ttctaaaatc atgaaaagaa
    14701 ttctttgcat tacaggtacc agagccgact tcggcaagct aaaaccttta ttagcctata
    14761 ttgaaaatca cccagacctt gaattgcatt tgattgtaac tggtatgcat atgatgaaaa
    14821 catatggcag aacctacaag gaagtaactc gagaaaacta tcaacataca tatctgtttt
    14881 caaatcaaat ccaaggtgaa ccaatgggtg ccgttttagg caataccatt acgtttatct
    14941 ctcgtctatc tgatgaaatt gaacctgata tggtcatgat tcacggcgac cgtttagaag
    15001 cactagcagg cgcagctgta ggtgcattaa gcagccgttt agtttgccat atcgaaggtg
    15061 gtgaactatc tggtacagta gatgactcca ttcgtcattc tattagtaaa ctttctcata
    15121 tccacttggt agcaaatgaa caagctgtca ctcgcctagt gcaaatggga gaaaaaagaa
    15181 agcatattca catcatcggc tcccccgatt tagatgttat ggcctcttcc accctcccat
    15241 ccttagaaga agtcaaagaa tattacggtt taccatacga aaattatggt atttctatgt
    15301 ttcaccccgt gactacagaa gcacatttaa tgccacaata tgcggcccaa tatttcaaag
    15361 cattagaatt aagtggccaa aatatcatta gcatctaccc taataatgac actggcactg
    15421 aaagtattct gcaagaatta ttaaaatatc aatctgataa atttattgca tttccttcca
    15481 ttcgatttga atatttttta gtcttattga aacatgctaa atttatggtc ggcaactcaa
    15541 gtgcaggtat tagagaagct cctctctacg gtgtcccttc aattgatgtt ggtacacgcc
    15601 aaagtaaccg ccatatggga aaatctatta ttcatacaga ttatgaaact aaaaatatct
    15661 ttgatgcgat tcaacaagca tgcagtttag gcaaatttga agcagatgat acctttaatg
    15721 gcggagatac tcgcaccagc acagaaagat ttgctgaagt aatcaacaat cctgaaacgt
    15781 ggaatgtttc tgctcaaaaa cgttttatcg atttgaatct ttaaattatg gaaaaacaaa
    15841 atattgcggt tatacttgcg cgccaaaact ccaaaggatt gccattaaaa aatctccgga
    15901 aaatgaatgg catatcatta cttggtcata caattaatgc tgctatatca tcaaagtgtt
    15961 ttgaccgcat aattgtttcg actgatggcg ggttaattgc agaagaagct aaaaatttcg
    16021 gtgtcgaagt cgtcctacgc cctgcagagc tggcctccga tacagccagc tctatttcag
    16081 gtgtaataca tgctttagaa acaattggca gtaattccgg cacagtaacc ctattacaac
    16141 caaccagtcc attacgcaca ggggctcata ttcgtgaagc tttttctcta tttgatgaga
    16201 aaataaaagg atccgttgtc tctgcatgcc caatggagca tcatccacta aaaaccctgc
    16261 ttcaaatcaa taatggcgaa tatgccccca tgcgccatct aagcgatttg gagcagcctc
    16321 gccaacaatt acctcaggca tttaggccta atggtgcaat ttacattaat gatactgctt
    16381 cactaattgc aaataattgt ttttttatcg ccccaaccaa actttatatt atgtctcatc
    16441 aagactctat cgatattgat actgagcttg atttacaaca ggcagaaaac attcttaatc
    16501 acaaggaaag ctaaatgcaa aacaacaacg aatttaaaat tggtaatcgt tcagtaggtt
    16561 acaaccacga accattgatt atctgtgaaa tcggcatcaa tcatgaaggc tctttaaaaa
    16621 cagcttttga aatggttgat gctgcctata atgcaggcgc tgaagttgtt aaacatcaaa
    16681 cacacatcgt tgaagacgaa atgtctgatg aggccaaaca agtcattcca ggcaatgcag
    16741 atgtctctat ttatgaaatt atggaacgtt gcgccctgaa tgaagaagat gagattaaat
    16801 taaaagaata cgtagagagt aagggtatga tttttatcag tactcctttc tctcgtgcag
    16861 ctgctttacg attacaacgt atggatattc cagcatataa aatcggctct ggcgaatgta
    16921 ataactaccc attaattaaa ctggtggcct cttttggtaa gcctattatt ctctctaccg
    16981 gcatgaattc tattgaaagc atcaaaaagt cggtagaaat tattcgagaa gcaggggtac
    17041 cttatgcttt gcttcactgt accaacatct acccaacccc ttacgaagat gttcgattgg
    17101 gtggtatgaa cgatttatct gaagcctttc cagacgcaat cattggcctg tctgaccata
    17161 ccttagataa ctatgcttgc ttaggagcag tagctttagg cggttcgatt ttagagcgtc
    17221 actttactga ccgcatggat cgtccaggtc cggatattgt atgctctatg aatccggata
    17281 cttttaaaga gctcaagcaa ggcgctcatg ctttaaaatt ggcacgcggc ggcaaaaaag
    17341 acacgattat cgcgggagaa aagccaacta aagatttcgc ctttgcatct gtcgtagcag
    17401 ataaagacat taaaaaagga gaactgttgt ccggagataa cctatgggtt aaacgcccag
    17461 gcaatggaga cttcagcgtc aacgaatatg aaacattatt tggtaaggtc gctgcttgca
    17521 atattcgcaa aggtgctcaa atcaaaaaaa ctgatattag ttaataataa aatagattaa
    17581 gctattctta aattcagaat attgcttatc tatattaaaa atttctaatt tttaaggttc
    17641 tgattgaaat cagaacctta tttcaactat tactttttac tcataatcga attatatact
    17701 ttaggacttt ataatatggc tgttattata tttgttaacg gaattcgggc tgtaaatggc
    17761 cttgttaaat catctatcaa tactgcaaac gcttttgctg aagaaggact ggatgttcat
    17821 ttaattaatt ttgttggcaa tattactgga gcagagcatt tatacccccc attccactta
    17881 catcccaatg tcaaaacctc cagcatcata gatttattta atgacattcc agaaaatgtt
    17941 agctgccgaa atactccttt ttattctatt catcaacaat tcttcaaagc tgaatatagt
    18001 gcccactata agcatgtttt gatgaaaatt gaatctttat tatctgcaga agatagcatt
    18061 atcttcactc atcctcttca actggaaatg tatcgtttag cgaataatga tatcaagtca
    18121 aaagccaaac taattgtaca aattcatggt aattatatgg aagaaatcca taactatgaa
    18181 attttggcac gaaatatcga ttatgttgac tatcttcaaa cggtatctga tgaaatgctg
    18241 gaagaaatgc attcccattt caaaatcaaa aaagacaaat tagtttttat tccaaacatc
    18301 acttatccca tttcattaga aaaaaaagaa gctgatttct ttattaagga taatgaagac
    18361 attgataatg ctcagaaatt taaacgtatc tctattgttg gcagtattca gccaagaaaa
    18421 aaccaattgg atgccattaa aatcatcaat aaaattaaaa atgaaaatta cattttacag
    18481 atatatggca aatctattaa taaagattac tttgaattaa ttaaaaaata tattaaagac
    18541 aataagttac aaaaccgtat cttattcaaa ggtgaatctt ccgagcagga aatttatgag
    18601 aatacagata tcctaatcat gacatctcaa agcgaaggct ttggttatat atttctagag
    18661 ggtatggtgt acgatatccc tatccttgcc tataatttta aatatggagc gaatgatttt
    18721 agcaattata atgaaaacgc ttcagttttt aaaactggtg atatttctgg aatggcaaaa
    18781 aaaataattg agctattaaa taacccagaa aaatataaag aattagttca atataatcac
    18841 aatcgcttct taaaagaata tgcaaaagat gtggttatgg ctaaatattt cactattctt
    18901 ccacgcagct ttaataacgt atcattatcg tctgctttca gccgaaaaga attggacgaa
    18961 ttccaaaata ttactttttc tattgaagat tctaatgatt tagctcatat ttggaatttc
    19021 gagctaacca atcctgcaca aaatatgaat ttttttgctt tagttggcaa gcgaaaattt
    19081 ccaatggatg ctcatatcca aggaacacag tgtacgatta agatagctca taaaaagaca
    19141 gggaatttat tgtcgctttt actaaaaaaa cgaaatcagt tgaatttatc aaggggatat
    19201 accttaattg cagaagataa tagctatgaa aaatatattg gagcaatatc taataaaggt
    19261 aactttgaaa ttattgcaaa taaaaagaac tcattagtta ctataaacaa aagtacctta
    19321 gagttgcatg agattcccca tgaactacat cagaataaat tactgattgc tttacccaac
    19381 atgcaaacgc ctctaaaaat tactgatgat aatttaatac ctatccaagc ctccataaaa
    19441 ttagaaaaga ttggaaatac ttattaccca tgtttcttgc catctggcat atttaataat
    19501 atctgcttag attacggtga agaatccaaa attattaatt ttagtaaata ttcttataaa
    19561 tatatctatg actcaattcg tcatattgag caacatacag atatatcgga tattatcgtt
    19621 tgcaatgttt attcttggga acttattcgt gcctcagtta ttgagagcct tatggaattt
    19681 accggaaaat gggaaaaaca ctttcagact tctcctaaaa ttgattatcg atttgatcat
    19741 gaaggtaagc gttcgatgga tgatgtcttt tcagaagaaa catttattat ggaatttccg
    19801 cgtaaaaatg gtatagataa gaaaacagca gccttccaaa atataccaaa cagtattgta
    19861 atggagtatc cgcagaccaa tggttacagt atgcgcagtc attcactgaa aagtaatgta
    19921 gttgcggcaa aacattttct tgaaaaatta aataaaatta aggtagatat taaatttaaa
    19981 aagcatgacc ttgcaaacat caaaaaaatg aatcgaatta tttatgagca tttaggcatt
    20041 aacataaata tcgaagcatt tctaaaacca cgattagaaa aatttaagcg tgaagaaaaa
    20101 tattttcatg atttcttcaa aagaaataat tttaaagagg taattttccc aagcacttat
    20161 tggaatccag gtattatttg tgctgcacat aaacaaggta ttaaggtatc tgatattcaa
    20221 tatgctgcca ttactcctta tcatcctgcg tattttaaat caccaaaatc acattacgtt
    20281 gctgataaat tgttcttatg gtctgaatat tggaatcatg agcttttacc aaatccaaca
    20341 cgagagattg gttctggtgc cgcatattgg tatgcattag atgatgtgag attttcagaa
    20401 aaactgaatt atgactatat ctttctatct caaagtagga tttcttcgcg cttgcttagt
    20461 tttgcaattg agtttgcatt aaaaaatcct caactacagc ttttattttc taagcatcca
    20521 gatgaaaata tagatttaaa gaacagaatt attcctgata atcttataat ctccacggaa
    20581 tcttctatac aaggcatcaa tgaatctcgc gttgctgtag gtgtttattc aactagctta
    20641 tttgaggcat tagcatgcgg caaacaaact tttgttgtta aatatccggg atatgaaatt
    20701 atgtcaaatg aaatagattc agggttattc tttgcagtag aaacacctga agaaatgctt
    20761 gagaaaacaa gcccgaattg ggtggctgtg gcagatattg aaaaccagtt ttttggccaa
    20821 gaaaaataat ttttaagtta atctttaaaa gtgcaatatt tttcttattt taaatattac
    20881 actttattct tttaatcata ggaactcaca tgtattctga acagggaatt aataatacta
    20941 ttaacatatc tactacatct ttaaccaatg ccacgcaact aactgtgatc gggaataata
    21001 actctgtata tataggtaat aattgtaaaa tcgtcagctc caatattaga ttaaaaggaa
    21061 ataatataac cttatttata gctgatgatg tagaaatcat gggactagta tgttcccttc
    21121 attcggactg ctctttacaa attcaagcca agaccactat gggcaatgga gaaattacca
    21181 ttgctgaaaa aggtaagatt agtattggca aagattgtat gctggcacat ggatatgaaa
    21241 ttagaaatac tgatatgcat ccaatttatt ctttagaaaa tggcgaacga ataaaccatg
    21301 gtaaagacgt tattatcggt aatcacgtgt ggcttggccg caatgttact atattaaaag
    21361 gtgtatgtat tccaaataat gtagttgtag gttctcatac tgtgctatat aaaagtttta
    21421 aagaacctaa ttgtgtaata gcaggttcac ctgcaaaaat agtaaaagaa aatattgtat
    21481 ggggaagaaa aatgtatcat tcaactatgt atgatgaccc tactttaaat gaattttata
    21541 aataa
//
LOCUS       DAWKOX010000015        20937 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.015, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000015 DAWKOX010000000
VERSION     DAWKOX010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20937
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.015"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(79..771)
                     /locus_tag="WJK78_000393"
     CDS             complement(79..771)
                     /locus_tag="WJK78_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ7597367.1"
                     /translation="MFHAFILRIYTMIKNISKLINHAVLIGFIPNIVFAYPIFAENPA
                     SYQNIHVRSWKARRDSGIVKQDLDFSCGAASIATLLNNFYGRHYSEAEILDKMDKTQM
                     RASFDDMQRIMPELGFEAQGYALPFEQLVQLKIPVIVYLKYRKNNHFSVLNGINGETV
                     LLADPSLGHVSMSKSQFLSAWKTRDGEMEGKILAIVPKNTDFVRNQMFFNKNPVRQTR
                     FTVEQIQMRQKR"
     gene            complement(1077..1634)
                     /locus_tag="WJK78_000394"
     CDS             complement(1077..1634)
                     /locus_tag="WJK78_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597368.1"
                     /translation="MMQKHKCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSI
                     SYINTERNQSEFANPIYVQTSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQ
                     AEMKETQGEFVPIIAAAAFGGALGAWEYHGANLYNHGKLGTAQGAATAAGIGAATGVA
                     AKQGWLLLPEADWLEIWHGDRVFMH"
     gene            complement(1879..2037)
                     /locus_tag="WJK78_000395"
     CDS             complement(1879..2037)
                     /locus_tag="WJK78_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597369.1"
                     /translation="MKTPLPICTLSALAACALSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2034..2876)
                     /locus_tag="WJK78_000396"
     CDS             complement(2034..2876)
                     /locus_tag="WJK78_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7597370.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPILVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNNPADEHVMLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            2942..3085
                     /locus_tag="WJK78_000397"
     CDS             2942..3085
                     /locus_tag="WJK78_000397"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597371.1"
                     /translation="MPSEKYGIRAVKLCGGKCAIIRAVLPLLRSCSANIQAAWTTYNR
                     IPA"
     gene            3115..4035
                     /gene="pyrB"
                     /locus_tag="WJK78_000398"
     CDS             3115..4035
                     /gene="pyrB"
                     /locus_tag="WJK78_000398"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ7597372.1"
                     /translation="MPNPLYKQHVISISDLTREQLELLLQTALKLKSEPHGNLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLAHAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4045..4503
                     /locus_tag="WJK78_000399"
     CDS             4045..4503
                     /locus_tag="WJK78_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ7597373.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4568..5233
                     /locus_tag="WJK78_000400"
     CDS             4568..5233
                     /locus_tag="WJK78_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597374.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5296..6513)
                     /locus_tag="WJK78_000401"
     CDS             complement(5296..6513)
                     /locus_tag="WJK78_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ7597375.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWSRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            6655..7200
                     /gene="def"
                     /locus_tag="WJK78_000402"
     CDS             6655..7200
                     /gene="def"
                     /locus_tag="WJK78_000402"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ7597376.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            7287..8213
                     /locus_tag="WJK78_000403"
     CDS             7287..8213
                     /locus_tag="WJK78_000403"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ7597377.1"
                     /translation="MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLRKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8292..9551
                     /gene="rsmB"
                     /locus_tag="WJK78_000404"
     CDS             8292..9551
                     /gene="rsmB"
                     /locus_tag="WJK78_000404"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ7597378.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAILRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNITAALQSHPPMTLRVNRRHGNAESYLEKLAAEGIPARALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            9517..10116
                     /locus_tag="WJK78_000405"
     CDS             9517..10116
                     /locus_tag="WJK78_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ7597379.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10116..12236
                     /locus_tag="WJK78_000406"
     CDS             10116..12236
                     /locus_tag="WJK78_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ7597380.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAE
                     QILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEVGRDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVKTYA"
     gene            12229..13506
                     /locus_tag="WJK78_000407"
     CDS             12229..13506
                     /locus_tag="WJK78_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ7597381.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEVGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAGAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13597..14784
                     /gene="dprA"
                     /locus_tag="WJK78_000408"
     CDS             13597..14784
                     /gene="dprA"
                     /locus_tag="WJK78_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ7597382.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLHHFGSAQNALSAPAEQV
                     AALIRHKQALEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLAQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRYATPQAMRIAKDFGRALGGKGIPVVSGMASGIDT
                     AAHQGALQAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            14810..15271
                     /locus_tag="WJK78_000409"
     CDS             14810..15271
                     /locus_tag="WJK78_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ7597383.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15350..17656
                     /gene="topA"
                     /locus_tag="WJK78_000410"
     CDS             15350..17656
                     /gene="topA"
                     /locus_tag="WJK78_000410"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ7597384.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17729..18424)
                     /locus_tag="WJK78_000411"
     CDS             complement(17729..18424)
                     /locus_tag="WJK78_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597385.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLMICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFVPEMN
                     RILSDFKTTRGFK"
     gene            complement(18444..18995)
                     /locus_tag="WJK78_000412"
     CDS             complement(18444..18995)
                     /locus_tag="WJK78_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597386.1"
                     /translation="MEFLSLHPWWSFFIILTIILSYIGFCAHFHIQNGAVFFYSYRDV
                     TIVFLTPVILIALSYLIKNKEILSACILCITLIAFSWAWIIIYRPNTKRFFLSLLIVW
                     GKLLLSTIVWAILAISLGLAVITGNSKRKKYERRDRHAERNEKAFIGALLVGFELSRN
                     LLNLCCLHKDFSTPSKNIEVNRS"
     gene            19114..19491
                     /locus_tag="WJK78_000413"
     CDS             19114..19491
                     /locus_tag="WJK78_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7597387.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            19580..20149
                     /gene="rsmD"
                     /locus_tag="WJK78_000414"
     CDS             19580..20149
                     /gene="rsmD"
                     /locus_tag="WJK78_000414"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ7597388.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVFSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PNIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20272..20523
                     /locus_tag="WJK78_000415"
     CDS             20272..20523
                     /locus_tag="WJK78_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ7597389.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            20620..20703
                     /locus_tag="WJK78_000416"
     tRNA            20620..20703
                     /locus_tag="WJK78_000416"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20654..20656,aa:Tyr,seq:gta)
     gene            20734..20807
                     /locus_tag="WJK78_000417"
     tRNA            20734..20807
                     /locus_tag="WJK78_000417"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20766..20768,aa:Gly,seq:tcc)
     gene            20817..20891
                     /locus_tag="WJK78_000418"
     tRNA            20817..20891
                     /locus_tag="WJK78_000418"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20849..20851,aa:Thr,seq:ggt)
BASE COUNT         5242 a         5317 c         5689 g         4689 t
ORIGIN      
        1 gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat ataaaataaa
       61 tgggcaaaaa tcggtttatt atcgtttttg ccgcatttgg atttgttcta ccgtaaaacg
      121 tgtttgacga acgggattct tattaaaaaa catctgattt ctaacaaaat cagtattttt
      181 tggcacgatg gctaaaattt ttccttccat ttcgccatca cgtgttttcc atgcgctcaa
      241 gaattgtgat ttgctcattg agacgtgccc cagcgatgga tcagccagca aaacagtttc
      301 tccgttaata ccgttcaata ccgaaaaatg gttgttttta cggtatttta aatacacaat
      361 tacaggaatt tttagttgta ccaactgttc aaatggcaaa gcataacctt gtgcttcaaa
      421 acccagttcg ggcattatgc gttgcatatc atcaaaagaa gcacgcattt gggttttatc
      481 cattttgtcc aagatttccg cttcagaata atgtctgcca taaaaattat tcagtaacgt
      541 ggcaatcgaa gccgcgccgc aagaaaaatc caaatcttgt tttactatgc cggaatctcg
      601 ccgtgctttc caactccgta catggatgtt ttggtaagaa gcggggtttt cagcaaatat
      661 agggtaagca aaaacaatat ttgggataaa gccaattaaa accgcatggt ttattaattt
      721 agaaatattt tttatcatag tatatatgcg tagaataaac gcatgaaaca taaaaaaata
      781 aaatcatatg caattttatt gcatgaataa atatgaataa aatagataat gatgggagta
      841 aatacgccat gtattttgga agtttaaatt tattaataat aaaataattt atcgtagcgc
      901 aaataaatcc caaaattgga acgattagaa aaaaaattaa tacacccatc atcatgcaaa
      961 ctctatatta ataaatagct aactaattct attgtggaaa ttagttagct aactaaaagt
     1021 tattaatgat tatttccgag aattgactgc attgttggca gcattggccc caaaacctag
     1081 tgcatgaata cccggtctcc atgccaaatt tccagccaat ccgcctccgg cagcagcagc
     1141 cagccctgtt ttgccgctac tcctgttgcc gcaccgattc ctgccgcagt agccgcgcct
     1201 tgcgcagttc ctaatttacc atgattatac aaattagcac catgatactc ccatgcacct
     1261 aatgcaccgc caaaagcagc ggctgcaata atgggaacaa attcaccttg tgtttctttc
     1321 atttcagcct gtgataattg aattgctttc acattttggc tgtcaaaaac ttggctgtct
     1381 aaattttgcg ccattacagg tgtaatcatc atagccatta cagttgcaat tttcgttgcg
     1441 ctggtttgca cataaatagg attagcaaat tcgctttgat tgcgttcagt gttgatgtag
     1501 ctaatactgc tttctagttt gaatttaccc ttgtcagtca ataattcttc caaacttaaa
     1561 ggtaagtcag cataagcaat ttggctggca acagtcaaaa taaaatctat tagacatttg
     1621 tgtttttgca tcatttcgtt tgattttcta gtttttgaga atgatacaaa gtttttttac
     1681 aaagtaaaga gtcactctga aaaacatttt ttcattataa atcaaaatat tgatagaata
     1741 aatagcgagc atcgattcac ggtgtacttt agtgcaaagc gtacaacgcg agcctgaacc
     1801 accagccgca acaggaaaag aaagccgata gagtgcaatg cttgccaacg tgcaagcgag
     1861 cttgcaagaa cgcttggctc aacgagagca ggcaagacag aaagcagaaa gcaggatagg
     1921 agcggtaacg caaaggtctc gggctttgat ttcgccgtaa accctgctgc cgccttgtcc
     1981 ggaaagggcg caggcggcga gtgccgacag ggtgcagatg gggagggggg ttttcatttg
     2041 gggtcgcaac ggaagtggta tgcgcagatt tcaaaaccgt ttttgaaata caggcggtgc
     2101 gcgtcggcac ggtcgtggtt gacgtggacg ttgaggtgga ttttggtaac ccctgtttcc
     2161 gcaccgattt tccggacttc ttccagcagg cgcgaggcgt agcctttgcg gcggctttgc
     2221 ggcagggtaa cgatgtcatc gatgtggatg tggcggccgc cggcgagggt gcaggcttcg
     2281 cggaagccgc agacggcgac ggcattgtgt ttgccttctt caaaaatacc cagcaggcgg
     2341 tagccttggg ggcgttggac tttgttgatc tgttcggtaa agcggttgat gtcggtcagg
     2401 gcggaacgca aaacgctcaa ggctgcaaag gcggtggcgg tgtcgtccgc gccgatttcg
     2461 cgcaaaacgt aggatgcgcc cgaggcggtc tgttcctgtg ctttctcggc ggcgtgtttt
     2521 tcttcgattg cctgtgccag catgacgtgt tcgtcggcag ggttgttttg tccgccctgt
     2581 tcgcgttctt cgagcagggc tttgcagtcg atgacgcgca ggtcgttgtc ggcggcaaag
     2641 tccatcagga agcggaacat ttggggattg tcggtttcca gttttttatc gacggcgacg
     2701 cagcggatgt tgtccaccag tatggggcgc acccatttcg aataggaaag cctgtggtct
     2761 ttggtgaacg aggacagaat gccgcacagg cgttccgccc agtcgctggg acggaaaatc
     2821 ttgccggaac tcgttgtgcc gtggatgacg acttcgtagg ggttgcagac taacatggcg
     2881 gcttcctgaa aagaaatgtc tggcgcgatt ataccttatg cttatgcggg cgtgtttgga
     2941 tatgccgtct gaaaagtacg ggattcgtgc ggtaaaactt tgcggcggca aatgtgcgat
     3001 aatacgcgcc gtattgccgc ttttgcgaag ctgttccgca aacatacagg cggcgtggac
     3061 gacgtataac cggatacccg cctgacgcgg gttttttacg gaaggggggc aaaaatgcct
     3121 aatccgctat ataaacagca tgttatttct atttctgatt tgacgcggga acagctcgag
     3181 ctgctgcttc agacggcatt gaaactgaag tcggagccgc acggcaacct gttggaaggg
     3241 aaacttatcg gttcgtgctt ctttgaaccg tccacgcgta cgcgcctgtc gtttgaaacg
     3301 gcggtacagc ggctgggcgg caaggtcatc ggtttctcgg acggcgcgaa taccagtgcc
     3361 aaaaaaggcg agacgcttgc cgataccgcc cgcatcattt ccggctacac cgacgcaatc
     3421 atccaacgcc accccaaaga cggcgcggcg cgcgtggcag cggagttttc gcgcgtcccc
     3481 gtcatcaacg ccggcgacgg caccaaccag caccccagcc agaccttgtt ggatctggta
     3541 acgatttatg aaacgcaggg gcgtttggac aagctcaaaa tcgccatggc gggcgacttg
     3601 aaatacgggc gcaccgtgca ttcgctttgt caggcgttga aacgctgggg ctgcgaattt
     3661 gcctttgttt cgccgcccag cctcgcgatg cccgactaca ttaccgaaga gttggacgaa
     3721 gccggctgcc gataccgtat cctcggcagt ttggaagagg cggctgaatg ggcggacatc
     3781 ctgtatatga cccgcgtcca gcgcgaacgt ttcgatgaac aggaatttgc caaaatccaa
     3841 ggcaaattca acctcgaagc gtctatgctc gcccacgcca aaccgaacct gcgcgtgctg
     3901 caccctttgc cgcgcgtgga cgaaatccat cccgatgtcg atgccacgcc gcatgcctat
     3961 tatttcgagc aggcaaccaa cggcgtttat gcgcgtatgg cgatattgtc gctggtgttg
     4021 aacgaagaag tgtgaggaac cgatatggaa accccgaaac tcagtgtcga agccattgaa
     4081 aaaggtacgg ttatcgacca tattcccgcc ggcagggggc tgaccatcct gcgccagttc
     4141 aaacttttgc actacggcaa cgcagtaacc gtgggcttca acctgcccag caaaacccaa
     4201 ggcagcaaag acatcatcaa aatcaaaggc gtgtgcttgg acgacaaagc cgccgaccgc
     4261 cttgccctgt ttgcacccga agcagtggtc aacaccatcg acaatttcaa ggttgtgcag
     4321 aaacggcatt tgaacctgcc cgacgaaatc gccgaagtgt tccgctgtcc gaacacgaat
     4381 tgcgccggcc acggcgagcc ggtcaaaagc cggttttatg ttaaaaaaca caacgggcag
     4441 acgcggctga aatgccatta ctgcgaaaaa acctacagcc gggattcggt ggcggaagcc
     4501 tgacggattc ccttaaaccg agcgggcggc atttcgtctg ccgcttgttt tgccaatctg
     4561 aaatggaatg atgatgcacg cttctgtcca aagccgtttc gcaccgatac tttatgtttt
     4621 gattttcttt gccggttttt tgaccgcgca aatctggttc aatcagaaag cctatactga
     4681 agagctgcct ccgcttctgt ccgcattgtc cgctgtcgcg ctggtgtggc tggcgtgggc
     4741 gttcgtgtcg gcgcgttcaa aggctaaggc ggaaaagttc taccgcgaaa aaatgataca
     4801 gaacgaaagc atacaccccg tcctgcacgc ttctttgcaa cacttggaac acaagccgca
     4861 aatgctcgcc ctgctggtca aaaaccacgg caaaggtatg gcggagcagg tcaggttcaa
     4921 ggcagaagtg ctgcccgacg acgaagacgc gcgcacgatt gccgccgagt tggcaaaaat
     4981 ggatatgttc gcattgggga cggacgcggt cgcctcgggc gaaacctatg gacgcgtgtt
     5041 cgccgatatt ttcgagttgt cggcggcttt ggaggggcgc gcgttcaaag gaatgttgaa
     5101 actgacggcg gaatataaaa acatcttcgg cgatgcctgt cgttcggaaa cggcgttgga
     5161 gttgggcgcg ctcaatcagg cgttgcagga gatttcaaaa acatcggaaa agtccaaacg
     5221 gatattttat tgaagatgga aaaatgccgt ctgaaacgga aggtgtttca gacggcattt
     5281 ttgtcggatg attaattatt cggagcggtt gaagccaaac ttcacgcggc tgcggccctg
     5341 atccggtata ttgtccaaat cgcgtcccgg attggcggcg gtgtcgccta cggaaatatc
     5401 ggagatgttt tccaaaatga tggcggacga caggtgttcg gaggtgcggt aaaccattgc
     5461 caagcccact tcttcggcag gagtggaaat cagttcgacg gtatccctgc ttttgaaatt
     5521 gttggagagg tcgacctgca tcgttttctt gcgtttgtag aggctcaaaa ccgtgccttt
     5581 gtccaaaccg tccgcctcgc ctttgtcgat ggtgatggtt tgaaactggc cggcaatcct
     5641 tgtgccttca aacacggaaa cgattttagc ctgaaccggg cgggacggtt cgtgcggcat
     5701 catgttgaag cggtcggtgt cttccggcat tttcatcagg tagtcgccct gctgtatttc
     5761 ggaaatggcg gtttcgacca ccagcggctg tatcgaaggg gtgcgcagcg gggtaatcaa
     5821 aggatgggtg cgggtatggt attcgttgtc tttcggccgt tctccagcct gtttcgagcg
     5881 ttgttcgagg acagagtcgg tatagtcgag ggagcgcacg atgccgctga atgcgacttc
     5941 ctgcccgagg aatttacccg tatccggatc ggtgatgttt ttattgattc ggtaggtcag
     6001 gtagcggccc ggctctttca ggcctttggt gtaaaccctg gtgcctttgg tgtacagcag
     6061 cctgccttcc gggcccgaga gcaggcgcgg cgcggcagcg gtttctttgc gggaaacgat
     6121 ttgcggatgc cgcataaaga tgcggtagaa gttgacatcg atggcgggaa taccgtatcc
     6181 ggacacttcc ttatccggac tcattttgac gacggggatg ccgtctgtct gttccaagcc
     6241 gaggcgcggt tcgccgtcaa cgtggcgcaa caccaatacc tggtccggat aaatcaggtc
     6301 gggattgtgg atttgatccc ggttcgcgtc ccacaggcgg ctccattgcc acgggctgta
     6361 caggtatttg cccgaaatgc cccacagggt gtcgccctgt ttgaccgtgt agcgttccgg
     6421 cgcgttcggg cgcacctcca aatttgccgc caaagtttgt gttgagaatg ccatacctgc
     6481 cgcgcagagc agggttataa tacgacgttg cataaccgtt ccccttatct gataaatttc
     6541 ggtttgtctt gcttgattgg gttggaaaaa gcggcggcag cccctcggga tgtgccgcgt
     6601 gataaaaaat gttccgcatt ttaacatcga attatccgca ccatcacggt aattatgaaa
     6661 aacaggcggc gtatccgccg aaggaaagag aaaattatgg ctttattgaa tatcttgcaa
     6721 tatcccgacg agcgtctgca cacggtggca aagcctgtcg aacaagtcga cgagcgcatc
     6781 cggaagctga ttgccgatat gtttgaaacg atgtacgaat cgcgcggcat cgggctggcg
     6841 gcgacgcagg tcgatgtgca cgagcgcgtg gtcgtgatgg atttgaccga agaccgcagc
     6901 gaaccgcgcg tgttcatcaa ccccgtcatc gttgaaaaag acggcgaaac cacttacgaa
     6961 gagggctgcc tgtccgtgcc gggcatttac gacaccgtaa cccgcgccga acgcgtcaag
     7021 gtcgaggctt tgaacgaaaa aggcgaaaag ttcacgctgg aggcggacgg cttgctggcg
     7081 atttgcgtgc agcacgagtt ggaccacctg atgggtatcg tgtttgtcga acgcctttcc
     7141 caactcaagc aggggcggat taagaccaag ctgaaaaaac gtcagaaaca tacgatttga
     7201 cccttttgcc gtgccgtctg aacgctgcaa agttttcaga cggcacggtc ttgtccgaca
     7261 attttacgca cacgcaggaa cacgctatga aagtcatctt cgccggcacg cccgattttg
     7321 ccgccgccgc cttaagagcc gttgccgccg ccggttttga aatcccgctg gtgctgaccc
     7381 agcccgaccg tccgaaaggg cgcggtatgc aactgactgc cccgcccgtc aaacaagccg
     7441 cgctggaact cggtttgcgc gtcgaacagc ccgaaaaact gcgtaacaac gccgaagccc
     7501 tgcaaatgct caaagaggtc gaggcagacg taatggtggt tgccgcctac ggtttgattc
     7561 tgccgcaaga cgtgttggat gtgccgaaac acggctgcct caacatccac gcttcgctgc
     7621 tgccccgttg gcgcggcgcg gcgccgattc agcgcgcgat tgaggccggc gatgccgaaa
     7681 ccggcgtgtg cattatgcag atggatgccg gtttggacac cggtgatgtg gtcagcgaac
     7741 accgctacgc catccaaccg accgataccg ccaacgaagt ccacgacgcg ctgatggaaa
     7801 tcggtgcggc ggcggttgtt gccgatttgc aacagcttca aagcaaaggc cgtctgaacg
     7861 cggtcaaaca gcccgaagaa ggtgttactt acgcgcaaaa attgcgcaaa gaagaggcgc
     7921 gtatcgattg gagcgaaagc gcggcggtta tcgaacgcaa aatccgcgct ttcaaccccg
     7981 tgcctgccgc gtgggttgag tatcagggca agccgatgaa aatccggcgg gcggaagtgg
     8041 tggcgcaaca aggcgcggca ggcgaagtgt tgtcctgttc ggcggacggt ttggtcgttg
     8101 cctgcggcga aaacgcgctg aagattaccg aattgcagcc tgccggcggc aggcgtatga
     8161 atatcgcggc gtttgcagca ggacggcata tcgaagcagg gacgaagctg taaatccctt
     8221 cagacggcat tccgatccgc aaacgggaat gccgcctgaa accatcagtt gaagaaagcg
     8281 aatcacataa tatgagtatg gcacttgccc aaaaacttgc cgccgacagc attgcggcgg
     8341 ttgccgaagg acgcaacctt caggacgtgt tggcgcaaat ccgcaccgcg catcccgacc
     8401 ttacggcaca ggaaaacggc gcgttgcagg acatcgccta cggctgccag cgttatttgg
     8461 gcagtttgaa acatatgctc gcgcagatgc tgaaaaagcc gattgacaac ccgcagctcg
     8521 aaagcctgct tttggcggcg ttgtaccaac tgcattacac gcgcaacgcg ccgcacgccg
     8581 tggtcaacga agcggtggaa agcatagcca aaatcggacg cgggcagtac cgttcgtttg
     8641 ccaacgcgat tttgcgccgc tttttgcgcg aacgcgacaa gcttgcggct tcctgtaaaa
     8701 aagacgatgt ggcgaaacac aacctgccgc tgtggtgggt ggcttacctg aaaaaccatt
     8761 atccgaaaca ctggcacaac atcaccgccg cgctacaatc ccatccgccg atgacgttgc
     8821 gcgtcaaccg ccgacacggc aatgccgaaa gctatttgga aaaactggct gcggaaggta
     8881 ttccggccag ggcgttggac gaatatgcgg ttacgttgga agaagccgtg ccggtaaacc
     8941 gtctgcccgg tttttcagac ggcattgttt cggtacagga cttcggtgcg cagcaggcgg
     9001 cgtatcttct taacccgaaa gacggcgaac ggattttgga cgcgtgcgcc gcgccgggcg
     9061 gcaagacggg gcatatcttg gaactggcgg attgccgcgt taccgccttg gacatcgatg
     9121 caggccgtct gaagcgtgtg gaggacaata tcgcccgttt gggctttcag acggcatcgg
     9181 cggcgtgtgc cgatgcgcgg gatttggcgg cgtggtatga tggaaagcct ttcgacgcaa
     9241 tccttgccga cgtgccatgc accgcttccg gcgtggcgcg gcgcaatccc gacgtgaaat
     9301 ggctgcgccg tccgaccgac gcgctcaaaa ccgcccgcca gcaggaagcc ctgctggacg
     9361 cactttggca gacgctgaaa cagggcggca gaatgctgct tgccacctgt tccgtgttcg
     9421 tcgaagaaaa cgacgggcaa ttgcaaaaat tcctcaaccg ccatgccgat gccgaaccga
     9481 tcgaatcgcg ggtgctttta ccgaacaaac accaagatgg cttttattac gcgcttattc
     9541 aaaagcatta aacaatggct tgtgctgctg ccgatgcttt ccgttttgcc ggacgcggcg
     9601 gcggagggga tagatgtgag ccgcgccgaa gcgaggataa ccgacggcgg gcagctttcc
     9661 atcagcagcc gcttccaaac cgagctgccc gaccagctcc aacaggcgtt gcgccggggc
     9721 gtgccgctca actttacctt aagctggcag ctttccgccc cgataatcgc ttcttatcgg
     9781 tttaaattgg ggcaactgat tggcgatgac gacaatattg actacaaact gagtttccat
     9841 ccgctgacca accgctaccg cgttaccgtc ggcgcgtttt cgacagacta cgacaccttg
     9901 gatgcggcat tgcgcgcgac cggcgcggtt gccaactgga aagtcctgaa caaaggcgcg
     9961 ctgtccggtg cggaagcagg ggaaaccaag gcggaaatcc gcctgacgct gtccacttca
    10021 aaactgccca agccatttca aatcaatgca ttgacttctc aaaactggca tttggattcg
    10081 ggttggaaac ctctaaacat catcgggaac aaataatgcg ccgttttcta ccgatcgcag
    10141 ccatatgcgc cgtcgtcctg ttgtacggac tgacggcggc aaccggcagc accagttcgc
    10201 tggcggatta tttctggtgg attgttgcgt tcagcgcaat gctgctgctg gtgttgtccg
    10261 ccgttttggc acgttatgtc atattgctgt tgaaagacag gcgcgacggc gtattcggtt
    10321 cgcagattgc caaacgcctt tccgggatgt ttacgctggt tgccgtactg cccggcgtgt
    10381 ttctgttcgg cgtttccgca cagttcatca acggcacgat taattcgtgg ttcggcaacg
    10441 atacccacga ggcgcttgaa cgcagcctca atttgagcaa gtccgcattg aatctggcgg
    10501 cagacaacgc cctcggcaac gccgtccccg tgcagataga cctcatcggc gcggcttccc
    10561 tgcccgggga tatgggcagg gtgctggaac attacgccgg cagcggtttt gcccagcttg
    10621 ccctgtacaa tgccgcaagc ggcaaaatcg aaaaaagcat caacccgcac aagctcgatc
    10681 agccgtttcc aggtaaggcg cgttgggaaa aaatccaacg ggcgggttcg gtcagggatt
    10741 tggaaagcat aggcggcgta ttgtacgcgc agggctggct gtcggcgggt acgcacaacg
    10801 ggcgcgatta cgccttgttt ttccgtcagc cggttcccaa aggcgtggca gaggatgccg
    10861 tcttaatcga aaaggcaagg gcgaaatatg ctgagttgag ttacagcaaa aaaggtttgc
    10921 agaccttttt cctggcaacc ctgctgattg cctcgctgct gtcgattttt cttgcactgg
    10981 tcatggcact gtatttcgcc cgccgtttcg tcgaacccgt cctatcgctt gccgaggggg
    11041 cgaaggcggt ggcgcaaggc gatttcagcc aaacccgtcc tgttttacgc aatgacgagt
    11101 tcgggcgttt gaccaagttg ttcaaccaca tgaccgagca gctttccatc gccaaagaag
    11161 cagacgagcg caaccgccgg cgcgaggaag ccgccagaca ttatcttgaa tgcgtgttgg
    11221 aggggctgac cacgggcgtg gtggtgtttg acgaacaagg ctgtctgaaa accttcaaca
    11281 aagcggcgga acagattttg gggatgccgc ttacccccct gtggggcagc agccggcacg
    11341 gttggcacgg cgtttcggcg cagcagtccc tgcttgccga agtgtttgcc gccatcggcg
    11401 cagcggcagg tacggacaaa ccggtccatg tgaaatatgc cgcgccggac gatgccaaaa
    11461 tcctgctggg caaggcaacc gtcctgcccg aagacaacgg caacggcgtg gtaatggtga
    11521 ttgacgacat caccgttttg atacacgcgc aaaaagaagc cgcgtggggc gaagtggcaa
    11581 aacggctggc acacgaaatc cgcaatccgc tcacgcccat ccagctttcc gccgaacgtc
    11641 tggcgtggaa attgggcggg aagctggatg agcaggatgc acaaatcctg acgcgttcga
    11701 ccgacaccat cgtcaaacag gtggcggcat tgaaggaaat ggtcgaagca ttccgcaatt
    11761 atgcgcgttc cccttcgctc aaattggaaa atcaggattt gaacgcctta atcggcgatg
    11821 tgttggcatt gtatgaagcc ggtccgtgcc ggtttgcggc ggagcttgcc ggcgaaccgc
    11881 tgatggtggc ggcggatacg accgccatgc ggcaggtgct gcacaatatt ttcaaaaatg
    11941 ccgccgaagc ggcggaagaa gccgatgtac ccgaagtcag ggtaaaatcg gaagtggggc
    12001 gggacggtcg gattgtcctg acggtttgcg acaacggcaa agggttcggc agggaaatgc
    12061 tgcacaacgc cttcgagccg tatgtaacgg acaaaccggc gggaacggga ttgggtctgc
    12121 ccgtggtgaa aaaaatcatt gaagaacacg gcggccgcat cagcctgagc aatcaggatg
    12181 cgggtggggc gtgtgtcaga atcatcttgc caaaaacggt aaaaacttat gcgtagcagc
    12241 gatattttaa ttgtagacga cgaaatcggc atccgcgacc tgctgtcgga aatcctgcag
    12301 gacgaaggtt attcggtcgc attggcggaa aacgccgaag aggcgcgcaa gctgcgccat
    12361 caggcgcgtc cggcgatggt gctgctggat atttggatgc ccgattgcga cggcatcacc
    12421 cttttgaagg agtgggcgaa aaacgggcag cttaatatgc cggtcgtcat gatgagcggg
    12481 catgccagca ttgacacagc agtggaagcc accaaaatcg gtgcgctcga ctttttggaa
    12541 aaaccgatct ccctgcaaaa actgctgtct gccgtcgaaa acgcgttgaa gtacggtgcg
    12601 gcgcaaaccg aaacggggcc tgtattcgac aagctgggca acagtgcggc gattcaggag
    12661 atgaaccgcg aagtcgaagc ggcggcaaag cgcacgtccc ctgtattttt gacgggtgag
    12721 gtgggttcgc cgtttgaaac cgtagcgcgc tatttccata aaaacggtac gccgtgggtc
    12781 agtccggcaa gggtcgaata tctgatcgat atgccgatgg aactgttgca gaaggcggag
    12841 ggcggcgttt tgtatgtcgg cgacatcgcc cagtacagcc gcaacatcca agccggtatt
    12901 gcctttattg tcggaaaggc ggaacaccgc cgcgtcaggg tggtcgcatc gggcagcagg
    12961 gcggcaggtt cagacggcat tgcctgcgag gaaaagctgg cggaactgct gtcggaatcg
    13021 gtcgtccgta ttccgccgct gcgtatgcag catgaagaca ttcccttcct gatacagggg
    13081 attgcctgca atgtggcgga aagccaaaag attgcgcctg cctcattcag tgaagaggca
    13141 cttgccgcat tgacccgtta cgactggccg ggaaatttcg accaactgca aagcgtcgtt
    13201 gcaacgctgt tgttggaggc ggacggacag gaaatcggcg caggggcggt ttcttccctt
    13261 ttggggcaga atgtgcctgc cgagggagcg gaagatatgg tgggcgggtt taatttcaac
    13321 ctgcccctgc gcgaattgag ggaggaggtg gagcggcgtt atttcgagta ccacatcgcc
    13381 caagaaggtc agaatatgag caaagtggcg cagaaagtcg gtttggaacg cacgcacctt
    13441 taccgcaaac tcaaacagct cggcatcggc gtttcgcgcc gggcggggga aaaaaccgaa
    13501 gaataggccc ggacggccgg ttttccggct gcgggctttt gttttcagac ggcatttggt
    13561 gcaaatgccg tctgaaatcg taaggggacg gattttatga cagaggacga acgtttcgcg
    13621 tggttgcaac tggcttttac gccctatatc ggtgcggaaa gtttcttgct gctgctgcac
    13681 catttcggca gtgcgcaaaa tgccctgtcc gcaccggcgg aacaggtggc ggcactgata
    13741 cggcacaaac aggcgcttga ggcttggcgc aatgcggaaa aacgcgcctt ggcgcggcag
    13801 gcggcagaag cggcgttgga atgggaaatg cgggacggat gccgtctgat gctgcttcag
    13861 gatgaagatt tccccgaaat gctggcgcag gggctgaccg cgccgccagt tttgtttttg
    13921 cgcggcaacg tgcggctgct gcacaagcct tccgccgcca tcgtcggcag ccgctatgcc
    13981 acgccgcagg cgatgcggat tgccaaagat ttcggcaggg cgttgggtgg gaaaggcatt
    14041 cccgtcgtgt cgggtatggc ttcgggcatc gacaccgccg cccatcaggg cgcgttgcag
    14101 gcagaaggcg gcaccatcgc cgtgtggggg acgggcatag accgcattta tccgccgtcc
    14161 aataaaaacc ttgcctatga aatcgccgaa aaagggctga ttgtcagcga gttccccatc
    14221 ggtacgcggc cgtatgccgg caactttccg cgccgcaacc gcctgattgc cgcgctgtcg
    14281 caggttacgc tggtggttga agctgcgttg gaatccggtt cgctgattac cgccggcttg
    14341 gcggcagaaa tggggcgcga agtgatggcg gtacccggtt cgatagacaa tccgcacagc
    14401 aaaggctgcc acaaactgat taaagacggt gcgaaactga cggaatgttt ggacgacatc
    14461 ctgaacgaat gcccggggct attgcaaaat acgggtgctt catcatattc tataaataag
    14521 gatacgcccg acacgggccg ccgcgccgtt cagacggcat acgccccgcc gcctgccgca
    14581 aaaatgccgt ctgaaggggc ggcaggcggc acagccgtcg gcggcatact ggataaaatg
    14641 ggtttcgacc ccatccatcc cgacgtgctt gccggacagt tggctatgcc tgccgcagat
    14701 ttgtatgccg cactgttgga attggaattg gacggcagcg ttgccgcaat gcccggcggc
    14761 agataccagc gtatccgaac ttgaacgcac tttatattaa ggaacacgaa tgaccgaagt
    14821 catcgcctac ctcatcgaac atttccaaga tttcgatacc tgtccgccgc ccgaagactt
    14881 gggtatgctg cttgaagaag cgggtttcga tacgatggaa atcggcaaca ccctgatgat
    14941 gatggaagta ttgctcaaca gctccgaatt ttccgccgaa cctgccgaca gcggcgcatt
    15001 gcgcgtgtac agcaaagaag aaaccgacaa cctgccgcag gaagtgatgg ggctgatgca
    15061 gtatctgatt gaagaaaaag ccgtcagctg cgaacagcgg gaaatcatca tccacgcgct
    15121 gatgcacatt ccgggcgacg aaattaccgt agataccgcc aaagtgctga ccctgctgct
    15181 tttatgggca aacaagagcg agctgcccgt gttggtcggc gacgagctga tgagcgcgct
    15241 tttactcgac aacaaaccca cgatgaactg aagcggcttc agacggcatt atcctgctaa
    15301 cctgccgtct gaaacgccgg catcaaaacc accatccaga gaacgacaaa tggcgaaaaa
    15361 cctattaatc gtcgaatccc cgtccaaagc caaaaccctg aaaaaatatt tgggcggcga
    15421 ttttgaaatc cttgcatcct acggacacgt ccgcgacctc gtccccaaaa gcggcgcggt
    15481 cgatcccgac aacggctttg cgatgaaata ccaactcatc agccgcaacg gcaaacacgt
    15541 cgatgccatc gtcgccggtg ccaaagaagc tgaaaacatc tacctcgcca ccgacccgga
    15601 tagggaaggc gaagccattt cctggcatct tttggaaatc ctcaaatcca aacgcggctt
    15661 gaaaaacatc aagccgcagc gtgtcgtgtt ccacgaaatc accaaaaacg ccgtgctcga
    15721 tgccgttgcc catccgcgcg aaatcgaaat ggacttggtg gatgcacaac aagcccgtcg
    15781 cgctttggac tatttggtcg gctttaacct ttcgccattg ttatggaaaa aaatccgccg
    15841 cggtttgagc gcaggccgcg tgcaaagccc cgctttgcgc ctgatttgtg agcgcgaaaa
    15901 cgaaatccgc gcgtttgaag cgcaggaata ttggacggtg catctcgaca gccacaaagg
    15961 ccgcagcaag ttcaccgcca aactcgccca atacaacggc gcgaaactcg aacaattcga
    16021 cctgccgaac gaagccgcgc aagccgacgt gttgaaagaa ctcgaaggca aagaggccgt
    16081 cgttaccgcc attgaaaaga aaaagcgcag ccgcaatcct gccgcgccgt tcaccacttc
    16141 taccatgcag caggatgccg tgcgcaaact cggcttcacc accgaccgca ccatgcgtac
    16201 cgcccaacag ctttatgaag gtatagacgt agggcagggc gcgatcggtc tgattaccta
    16261 tatgcgtact gacagcgtga atttggcgga tgaagcgtta accgaaatcc gccattacat
    16321 cgaaaacaaa atcggcaaag aatatctgcc gagtgccgcc aaacaataca aaaccaaatc
    16381 caaaaacgcc caagaagcgc acgaagccat ccgtccgact tccgtgtacc gcacgcccga
    16441 aagcgtcaaa cccttcctga gcgcagacca gttcaaactc tatcaaatga tttggcagcg
    16501 taccgtcgcc tgtcagatga cgcctgccaa attcgaccaa accaccgtcg atattaccgt
    16561 cggcaaaggc gtattccgcg taaccggaca agtgcaaacc ttcgcaggct tcttgagcgt
    16621 ttatgaagaa agcagcgacg atgaagaagg cgaagacagc aaaaaactgc ccgaaatgag
    16681 cgaaggcgat aaattgcccg tggacaaact ctacggcgaa caacacttta ccactccgcc
    16741 gccgcgctac aacgaagcca cgctggttaa agccctcgaa gaatacggca tcggccgccc
    16801 ctcgacctac gccagcatca tctccacgct caaagaccgc gaatacgtta cccttgagca
    16861 aaaacgcttc atgcccaccg acacaggcga catcgtcaac aaattcctga ccgaacactt
    16921 cgcccaatac gtcgattacc acttcaccgc caaactcgaa gaccagcttg acgaaattgc
    16981 cgacggcaaa cgccaatgga ttcccttgat ggacaaattc tggaaaccgt tcatcaaaca
    17041 agtggaagaa aaagaaggca tcgaacgcgc caaatttacc acgcaggaac ttgatgaaac
    17101 ctgcccgaaa tgcggcgaac acaaactgca aatcaaattc ggcaaaatgg gtcgttttgt
    17161 tgcgtgtgcc ggttatcccg agtgcagcta cacgcgcaat gtcaacgaaa ccgccgaaga
    17221 ggccgccgag cgcatcgcca aagccgaagc cgaacaggcc gaactcgacg gacgcgagtg
    17281 cccgaaatgt ggcggtcgcc tagtgtacaa atacagccgc accggcagca aattcatcgg
    17341 ctgcgccaac tatccgaaat gcaaacacgt cgagccgctg gaaaaaccga aagataccgg
    17401 cgtccagtgt ccgcaatgca aaaaaggcaa cctcgtcgag cgcaaatccc gctacggcaa
    17461 actgttttac agttgcagca cctatcccga ctgcaactac gccacttgga acccgcccgt
    17521 tgccgaagaa tgcccgaact gccattggcc ggtcttgacc atcaaaacca ccaaacgctg
    17581 gggcgtcgaa aaagtctgcc cgcaaaaaga atgcggctgg aaagaacaga ttgaaccgcc
    17641 cgcgccgaag gagtaagatt aggttggttt gaaagagaaa aggtcgtctg aaaaattttc
    17701 agacgacctt tgcttttctg tgattggttt atttgaatcc gcgtgttgtt ttaaagtccg
    17761 ataaaatccg gttcatttca ggcacaaaca aggcgatgta atcgtaagat agaccgcgac
    17821 tggcactggg atggggaaag cagacgactt cgcaatcttc aaacgattgg aatttgacat
    17881 tgaaacgtgt accgtcaaat tctttttgca ccgtctccag cggtttggtc tgcttaccga
    17941 ccaactgctc gaagcgtggc agtacatttt ggttgttcag aaaatccgcc aacctgctgc
    18001 ccatgaagag gatgactttc ggacgcagtt tttcgatgtg gtagagaaaa ttatcgatgt
    18061 gctcgggttg tgtgaacttg tcgggattgt cgatagtgtt gccctgtgta gcagcccagt
    18121 tggtttgaac cagggatttt tcaaatgcac cgcccaatcc attttcgtct aaggggtgtc
    18181 cccacatttc aaaccaattt tttatcgtat tgtcgtaacg ccactttttt gcctgctctc
    18241 cgaaatagag ggatttgttt gcaaatgtat ggtcgatttt gttttcaggg agtttgtatt
    18301 cacctgctac ataagcagcc tcatcggctt tactccaacc ccattcatag ccacaaatca
    18361 ttaagccatg tttgtcgttg tagcctttga acaggctgtt gctcaaattc aaatccttca
    18421 tcatgaactc ttccttttaa aatttaagag cgattgactt caatgttttt agatggggtg
    18481 gaaaaatcct tgtgtaggca acataaattc aataaatttc ttgataattc gaaacctact
    18541 aatagcgcac ctataaaagc tttttcatta cgttcagcat gacggtcacg tcgttcatat
    18601 tttttacgct tgctgttccc tgttattaca gctaagccaa gtgatatggc gagaattgcc
    18661 caaacaatag tacttaataa caattttccc catactatca atagggaaag aaaaaacctt
    18721 ttagtattag gtcgatagat tataatccat gcccatgaaa atgcaataag agttatacat
    18781 aagatacaag ctgataggat ttctttattt ttaattaaat aacttagggc gatgaggatg
    18841 acaggtgtca agaaaacaat agttacatcc cgatagctat aaaagaaaac tgccccattt
    18901 tgaatgtgga aatgtgcaca gaatccaata tagctaagga taatagttaa tataataaaa
    18961 aaagaccacc aagggtgaag agataggaat tccatgtttt cccttttttt gtaaaaagga
    19021 aaaaatctta tctaatagtt aattgcctaa ccagccagaa gaagtttaaa atctatccca
    19081 ataattcaac catctataca gaaagttcag cttatggaaa cccacgaaaa aatccgcctg
    19141 atgcgcgaat tgaataaatg gtcccaggag gatatggcgg aaaagctggc gatgtcggca
    19201 ggcgggtatg ccaaaatcga acgaggcgaa acgcagttga atatcccgcg tttggagcag
    19261 ttggctcaga ttttcaaaat cgatatgtgg gacttgctca aatcgggcgg tggtgggatg
    19321 gtgtttcaga ttaatgaagg tgatagtggt ggcgatattg cgttgtatgc gtcgggtgat
    19381 gtttcgatga aaatagaatt tttaaaaatg gagttgaaac actgcaaaga aatgttggaa
    19441 caaaaagaca aagaaatcga gctgctccgc aagctgaccg aaaccgttta aacagatatg
    19501 ccgtctgaaa aaagttttca gacggcatat tctttgacag gtcttgtata ataccgtttg
    19561 aacttacagg tttttgatta tggcggcagg caaacatacc aaacacagca accgggtacg
    19621 cattatcggc gggcaatgcc ggggcaggaa attgagtttc acatccgccg acggactgcg
    19681 tccgacaccc gacagcgtgc gtgaaaagct gtttaactgg ctgggacagg atttgacggg
    19741 taaaacggtt ttggatctct tcggaggcag cggcgcactc ggtatagaag ccgcttcgcg
    19801 caacgccaaa cgcgtgctga tttcggataa caaccgccaa accgtgcaga ccttgcagaa
    19861 aaacagtcgc gaactgggtt tggggcaggt gcaaatcgtc ttttcagacg gcatcgcata
    19921 tttgaagacc gtatccgaac agtttgatgt tgtctttctc gacccgccgt ttgcatggca
    19981 ggactggcaa atcctgttcg atgccttgaa gccgtgcctg aacccccggg cattcgtcta
    20041 tctcgaggcg ggtacgctgc cgaatattcc cgattggctg acggaatata gagaagggaa
    20101 atcggggcag agtacattcg aattaagggt tttccaagtg gctgaataat atgcgctttg
    20161 ataatcattt ccgagttgta aacattcgtt tgcaaccgtc cggttcaaaa aaaccttgtg
    20221 ctataatccg cgcccgcccg gttttgataa tttagtggaa aaggaaaaga aatgtcgctt
    20281 tttattaccg acgagtgcat caactgcgac gtatgcgaac ccgaatgccc caatgatgcc
    20341 atttcccaag gcgaggaaat ttacgaaatc aaccccaacc tctgcacgca gtgcgtcgga
    20401 cactacgatg agccgcagtg ccagcaggtt tgcccggtgg actgcatcct gattgacgaa
    20461 gaacatcccg aaacccatga cgagttgatg gcgaaatacg aaaagattat ccagtttaaa
    20521 taaattcttt ttaaaacatc aaattatgtc tgttttgaaa taaaatcaaa aaaaaacttg
    20581 acggaaaagc aagccgctaa taaactaacg ttctcttttg gagggattcc cgagcggtca
    20641 aagggggcag actgtaaatc tgttgcgaaa gcttcgaagg ttcgaatcct tctccctcca
    20701 ccaaaattct tacttggggc agtagcgagt aatgcgggtg tagctcaatg gtagagcaga
    20761 agccttccaa gcttacggtg agggttcgat tcccttcacc cgctccaaac aattaggccc
    20821 atgtagctca ggggtagagc actcccttgg taagggagag gtcggcagtt caaatctgcc
    20881 catgggcacc atccctcgat tattcatttc tttaaggctt agatatatag gatattg
//
LOCUS       DAWKOX010000016        20696 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.016, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000016 DAWKOX010000000
VERSION     DAWKOX010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20696
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.016"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(61..237)
                     /locus_tag="WJK78_000419"
     CDS             complement(61..237)
                     /locus_tag="WJK78_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597390.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIEKVPAR"
     gene            complement(240..1598)
                     /locus_tag="WJK78_000420"
     CDS             complement(240..1598)
                     /locus_tag="WJK78_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ7597391.1"
                     /translation="MKPLDLNFICQALKLPMLSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLTALQMMAKAWRENVDPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDDAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGNECAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAVDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMEMEEVVEALE
                     DK"
     gene            complement(1723..3369)
                     /locus_tag="WJK78_000421"
     CDS             complement(1723..3369)
                     /locus_tag="WJK78_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HEZ7597392.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVQGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(3392..4870)
                     /locus_tag="WJK78_000422"
     CDS             complement(3392..4870)
                     /locus_tag="WJK78_000422"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ7597393.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELVGRLKKDCPDLAVYSYGFSEHADIRIIDF
                     TASSDGIAAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDNVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRLLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4895..6640)
                     /locus_tag="WJK78_000423"
     CDS             complement(4895..6640)
                     /locus_tag="WJK78_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ7597394.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPIDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6701..6964)
                     /gene="ftsL"
                     /locus_tag="WJK78_000424"
     CDS             complement(6701..6964)
                     /gene="ftsL"
                     /locus_tag="WJK78_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ7597395.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6961..7947)
                     /gene="rsmH"
                     /locus_tag="WJK78_000425"
     CDS             complement(6961..7947)
                     /gene="rsmH"
                     /locus_tag="WJK78_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ7597396.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PEPPLKIAGRALKPGEAEIAANPRARSAVLRVAERTAGPIPEQSQRKTSEWQ"
     gene            complement(7944..8399)
                     /gene="mraZ"
                     /locus_tag="WJK78_000426"
     CDS             complement(7944..8399)
                     /gene="mraZ"
                     /locus_tag="WJK78_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ7597397.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8678..9895
                     /locus_tag="WJK78_000427"
     CDS             8678..9895
                     /locus_tag="WJK78_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7597398.1"
                     /translation="MTAPAPTCNMSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLI
                     AEKIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTY
                     SARPLHDLQLSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLIGYL
                     PQSHFLLNLGITELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVD
                     WAGFRFGDICHKL"
     gene            10027..10103
                     /locus_tag="WJK78_000428"
     tRNA            10027..10103
                     /locus_tag="WJK78_000428"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10061..10063,aa:Met,seq:cat)
     gene            10111..10186
                     /locus_tag="WJK78_000429"
     tRNA            10111..10186
                     /locus_tag="WJK78_000429"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10144..10146,aa:Ala,seq:ggc)
     gene            complement(10468..11289)
                     /locus_tag="WJK78_000430"
     CDS             complement(10468..11289)
                     /locus_tag="WJK78_000430"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ7597399.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGLGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLRFVSKKNYIPFAYYRIVFGIAIIILWLSGWISWE"
     gene            complement(11322..11966)
                     /locus_tag="WJK78_000431"
     CDS             complement(11322..11966)
                     /locus_tag="WJK78_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ7597400.1"
                     /translation="MKLKHLLPLLLSAALSAQAYALTEGEDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYRIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11969..12832)
                     /gene="ftsN"
                     /locus_tag="WJK78_000432"
     CDS             complement(11969..12832)
                     /gene="ftsN"
                     /locus_tag="WJK78_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ7597401.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKQPVADKA
                     DEVEEKADEPEREKSDGQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTPDKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHE
                     VASLIRSIESK"
     gene            complement(12938..14434)
                     /locus_tag="WJK78_000433"
     CDS             complement(12938..14434)
                     /locus_tag="WJK78_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ7597402.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARDKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14448..14768)
                     /locus_tag="WJK78_000434"
     CDS             complement(14448..14768)
                     /locus_tag="WJK78_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ7597403.1"
                     /translation="MFGKQLFEEVGSKISETIVNSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15252..16778
                     /gene="putP"
                     /locus_tag="WJK78_000435"
     CDS             15252..16778
                     /gene="putP"
                     /locus_tag="WJK78_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ7597404.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIVYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            17029..20634
                     /gene="putA"
                     /locus_tag="WJK78_000436"
     CDS             17029..20634
                     /gene="putA"
                     /locus_tag="WJK78_000436"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ7597405.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADKLDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4839 a         5987 c         5059 g         4811 t
ORIGIN      
        1 ggcctgcgcc cgtttgaggt tggcttgccg cccggcaagg tttcggacgg cttttgcaga
       61 ttaacgtgca gggactttct caatcacgca aatcgggtaa ctccccggat ttttgccgcc
      121 acccaagtct aaacataaat cttcataaag atacgcctgc gtctgcattc cggcataaaa
      181 cgcgccgacc agcgcggcaa tcaacaataa ggctttaaaa aaacgtcgac ttttcatttt
      241 cacttatcct ccaatgcctc gaccacttct tccatctcca taaagcgcga acctttcacc
      301 aacacggtgg cgcgttcggg caaatcgtgg cgcaacactt gaatcaacgg gtctttggcg
      361 gcgaaccaca aaccgtccgc gccaaatttt tccgccgctt cgacgctgtt gtcgccgaca
      421 aaataagccg cttcgatgcc ttggtcgcgg gcgtacgcgc cgacttcggc gtgcatggcg
      481 gcggcttcgt cctcacccag ttcgcccata tcgcccatca cgaaaatacg cggcgcaggc
      541 atacgcgcca acacgtcaac cgcagctttc atgctgtcag ggttcgcatt ataagtatcg
      601 tcaatcaggg ttgcgccctt gattccggat ttgacgttca gacggccttt gatattgctg
      661 aagcctttca aaccttccgc cacatcgttc aaactcaaac ctgcagccaa agacagcgcg
      721 gcggcggcgg cggcgttgtg gacattgtgg cggccgggaa cgggcagaac cacggctgcg
      781 cactcgttgc cgcacaccaa atcaaattcg cacgacaacg gtttcagcac gatattttcc
      841 gcgtggacat cgccgctatc gatgccgaaa gtgcgcgtat tcaaattaag cgttgccgtt
      901 ttgaagacag ccatattggc atcttcttga ggaatcagtg ccatgccgtc tgaacataag
      961 ccttgataaa tctcgctttt cgctttggca atatcgccca ctccgtcgaa accgcagccg
     1021 acatgggcgc gcatggcgtt gttgaccaat gcggcatcgg gtttggcgat ttgtgtcaaa
     1081 accgccagtt cgccaaaatg gttcataccc atttcaatca cggcatagcg gtgtttttcg
     1141 tttaatttca acaaagtcaa cggcaatccg atgtggttgt tgaagttgcc tgccgtcgcc
     1201 aaaacggcat catcaccgaa acggcggcgc aataccgcag ccagcatttc cttcaccgtc
     1261 gtcttgccgc ccgaaccggt aatgccgaac acaaacggat ccacgttttc acgccacgcc
     1321 ttcgccatca tttgcaacgc ggtaagcgtg tcatcgactt tcaacgcgcc atccattgca
     1381 acgcaatctt cgcgcgaaac cacaaccgcc gccgcaccag cagccaatac gtcttcaaca
     1441 aaatcatgcg catcaaaccg cccgcccgcc aatgcgaaaa acacatcgcc cgcgcggatg
     1501 tcgcggctgt cggttacgat gcgcgacacg ggtttgcttt cagacagcat cggaagcttg
     1561 agggcttggc agatgaaatt taggtccagt ggtttcatat ttactttcgt taatattcgg
     1621 gcggcggaca catcggtagc ggctgatttt tttatcgcct gttttgctgt ggtaaaacac
     1681 agattatttt cccattctca ttcggcattt tttctgtacg tatcattttt tagacgtatt
     1741 tttagtcgat ttgccttttc ccgcatacca cggcgcgggg tcgtcgggca gtccgtcgat
     1801 aaaggcaagg ttattgcctt cgccctgcac atcgggaaca ttcccccaaa aatcatagcc
     1861 gtcatcgggc aactcgtcgg tttcgatacc cgtccaactg ccgaatccgc gtaaaaaatt
     1921 aaacgcgctg cgcctcactt taatcatttc gcgccgcgta tcatcggacg aaattttaac
     1981 cagcggcacg ccgtagcttt gacgcttcca cgcaccatgt gtcaacgttc gctcgccgcc
     2041 tttaccgaca tgcatcaaac cgtggtcgga aaagtaaacc aaagaccagc tttctttatt
     2101 ttcattcaat atcttaactg tatcttctaa aaatttatcg gtttgcgcga tggtggaaac
     2161 atagcaggat attttttcag tttgatactg aaaccgccgc gcatccttat ccaaacgtgt
     2221 gcaaaaatca ctgtgcgaac ccatcaggtg catcacaatc agccgaggct tcgtgcctgc
     2281 atttcctatc aaaacccgtt tgaacgccgg caacaaaagg cggtcgctca accccgcgct
     2341 tttgccataa tcaccccttt gggtaaacca cggataatcg ctgcgtaggg cataggtgga
     2401 aatttcgttg gcaaaatgcc ccaacattcc ttgattagac agccacgccg tccgaaaacc
     2461 cgcctgcttc gccaagctga cgatgttatt gttcggttct cccggcagcc ccaaagtctg
     2521 cggcagcgaa agattcgtcg cgtgggcggt cgattggtaa ccgtttatca acagcccttt
     2581 ggtctgactc aaaaaaggcg tatcgggcaa tgggaaaccg taaacattca tataatccga
     2641 acgcgcgctc tcaccgataa ccacaacata atttttatac ttgggcgcaa catgacggat
     2701 atgccatgtt gacgcttttt ttgctgcttc caaaatgtgg gcgcgcttgg cggcatattg
     2761 tgccggcgcg gaagccaaat cgtaatacag gtcgaaaata ttcaacaaca ggccggcatc
     2821 aggttctcgc aaatctttat cgctggcgat tttatccatc accgcgcagg acaaaatcaa
     2881 agtcaataat atagtcagcc atattttgct gcggcgttta tagtttttta cgtcagcaaa
     2941 tacccccccc gatacacaat atctccaaac tgtcaagcca aaaatgaaaa ataatgcctg
     3001 cacaaaataa agcgacccgg gaagattgcc gacaaattca cgcgcctcgg caggattgct
     3061 ttccaatatc gaaccgacta tctgataaga cggcgcacca tacagccagc cgaccggcaa
     3121 atatagggcg gttgtgccga cgtaaatcag taaaacaact gaagaaacgc gcgggaaacc
     3181 gcgtgccaat aataataaaa atacaaccga agccaaagca cccacggcag aataacggta
     3241 gccgtattca tattccaagt gataacctga tgcgatggcc gcgccaaaac aaaaggctaa
     3301 aagcgcgcaa atgcccaatg tattttttaa tgtctgatcc atatttttta ttcgggcgga
     3361 ttgtttcata cgatgccgtc cgaatatccc attatttacg agttaacaaa gcctgtccga
     3421 cgatttcaag atcggaaaaa cggtgcttca cgccttgtac atcctgatag ttttcatgcc
     3481 ctttgccggc aatcaggatg atgtcgtttg cggcggcttg ttcaaccgca taacggatgg
     3541 cggcggcacg gtcggcttcg acgcattcgg gcgcgggaac ggcaggcagg atgtcgttga
     3601 tgatgtcgtg cggattttcc aaacgcgggt tgtcgctggt gacgacgact ttatccgcac
     3661 cctgtacggc tgccgcgccc atcagcaggc gtttgccgcg atcgcggttg ccgccgcaac
     3721 cgaatacgca ccacaaagcc gcaccctgcg gtttgatttc ctgcaaggtg gcgagtgctt
     3781 tttccaatgc gtcgggcgta tgggcataat cgacaacgac caaaggtttg ccgctgttca
     3841 tgatgcagtc catgcgccct gaagcgggac ggatttttgc cagcacatcc aatacattat
     3901 caagcggata gccgttggcg cacagcaagg cgatgcaggc ggcgaggttt tgcgcgttga
     3961 accgtccgag caggcgcgtg cggcatttcc cttcgcccca cggggtttgg aatacggctg
     4021 ctatgccgtc tgaagaggcg gtgaaatcga taatgcggat gtcggcgtgt tcgctgaagc
     4081 cgtagctata aacggccaaa tcgggacagt cttttttcag acgacctacg agttccgcgc
     4141 cgtattcgtc atccacgttg atgactgcgt gtttcaagcc gtgccagtaa aacaggcgcg
     4201 acttgatggc accgtaggct tccatcgtgc cgtggtagtc gaggtggtcg cgggtgaggt
     4261 tggtaaagat tgcgctgcgg aatgacacgc cgttgacgcg cgactggtca agcccgtggc
     4321 tggagacttc catcgcggcg actgttgcgc cttgttgacg gaaacggtag agcagggttt
     4381 ggacatcgac gggggcgggt gtggtatgcg tggtttcttc caatgcaccc caaaagccgt
     4441 tgccgaccgt gccgacaatg gcggtttttt cgcccaacaa atcggcagct tgcgccagcc
     4501 attgcgtgat ggaggttttg ccgttggttc cggttacgcc ccagactttg agaccgtctg
     4561 aaacgttgcc gtaaacttgc gccgccaata tgccggcacg gtgtttcaaa tctttgatgc
     4621 cttgattggg gactttccat tcgggattcc acgcgaattt gccatcgtcg tcccaaaaaa
     4681 caaaagccgc gccgttggca acggcggcgg ggatataact gcgtccgtcg gcatattcgc
     4741 ccggacaggc aacgaaaata tcgccttgtt tgatttggcg gctgtctgaa tgcaacaaac
     4801 gccctgccgc gtttgcacac gacagggtcg ggatgccggt ttcagccaaa ggggttaact
     4861 tgctgaacat aaaacaatct cgttgatact cggattaaga cggtgttttg acggctgcgg
     4921 cggtcagtgg cttggtcggg gaaatgccca agatgttcag gctgccgccc ataatttttt
     4981 tgaagggcgg ccctgccact acgccgccgt aataaccgtg ggcagtcggt tcgtcaatgg
     5041 ttaccgccac aatcacacgg gggtttttgg cgggggcaaa accgataaag gtagcgatgt
     5101 gtttgttgtc ggcataacgc ccgttgacga acttgcgcgc cgtgccggtt ttcgcgccga
     5161 catcgaaacc gtccaccgca cccgccgtac cggtgccgcc cggctcggtc acggaaacca
     5221 tcagattgcg tacctcgcgc gcggtcgatt ctttgaatat gcgtttgcct tgcggcgcaa
     5281 ccgcctgttt ttcaaagctg accggcagca aaacgccgtc gtgcgtcagt gcggtatagg
     5341 cgcgcgccaa ttgcagcagg ctcaattgca ggccgtaacc gaaagacatc gtcgcctgtt
     5401 cgatgggccg ccacctgcgc caatttctca acaaacctgc agtttcgccc ggaaagcccg
     5461 agtgcatacg cacaccgatg cccaactcat gatagaagtc atacatttct tcggcaccga
     5521 aacgcgcaga cagtttgctt gtgccgacgt tggacgattt ctgcatgatg ccgcgcacat
     5581 ccaaagaggg gtaaacatgg gtatcgcgca cgggagacgg tccgatttta taaggctgcg
     5641 tattcagccg ttcgttcaaa tcggttttgc ccgcatccaa tgctttcgca atcacaaacg
     5701 gtttgattgc cgaaccgggt tcgatcatat cggttacggc acggttgcgc cgctgttcgc
     5761 tgtctgcccg gccgggcctg ttgggatcgt aggcgggcgt attggccaag gcgaggattt
     5821 cccccgtgcg ggcatccaaa accaccaccg ttccggcttt tgcctgatgg tattcgaccg
     5881 ccttgttcaa ctcttcatag gccaaggtct gaatcctctg atcgagggaa aggatgatgt
     5941 ctttgccgtt tttcggggct ttattgcgcg gggagtccaa gctgtccaca atattgccct
     6001 gccggtcccg caaaacgact tccgcgccgt cttcgccatg caggctgtct tcaagcgaaa
     6061 gttccaaacc ttcctgacct ttgccgtcaa tatcggtaaa tccgatgacg tgtgcaaaca
     6121 ggttgcccat cgggtaatgg cgttttaatt ctttttcaaa tacaaagttt tccaaaccca
     6181 aggctttgac ctcttcggca accttgggat cgagctgccg cttaatccag ataaacgact
     6241 tgcctttctg ttcgagcttg ttcctcaaaa catcaatcgg aacatcgaca agctcggaca
     6301 ggcgttccaa ttgtgcggca gacggcattt ccttcatctc tttaggcacg gcaaacaggg
     6361 actccgtcgg cgcactcaac gccaaaaccg caccgttccg gtccgaaacc gtaccgcgtg
     6421 tagccggcaa tgtttgagtc cgcacaatcc ggttgtcgcc ctgttctttc aaaaagttat
     6481 acgttaccgt ctgcagatac agtccgcggg caatcagacc ggcaaacaag accgctattg
     6541 ccatcaggac gaagctgatc cgtccgttac tggtcatcgg ctttttgacc tgctcttctt
     6601 tgggcagcat ccggggctta tattcactct taatcaacat ttttacttct cgttattatt
     6661 atcctgacgc aggaatccga ttccggcaca caggctgctt ctatctttga tgcgccacca
     6721 taaaggtatt gcccgaaacc ggcggatgga ggttttgttt ttctgccgcc gccctgatcg
     6781 cttcgtggtt cgccaaacgc gcctgttgca gcctcatttg cgcataatcc tgctccaagg
     6841 cgatttcctg ttttttcgcc ttatccaaag ctgtgaagtt gagcctgtac tggttttgct
     6901 gcatcacaac ggaaaaagcg gaaacgcaca ccgcaagcag cagaaggaaa ttcaatttgt
     6961 tcattgccat tcagacgttt ttctctgtga ttgttccggt atcggaccgg cagtccgctc
     7021 cgccacacgc aaaaccgcac ttctcgccct cggattggcg gcaatttccg cctcacccgg
     7081 ctttaatgcc ctgcccgcga ttttcagggg cggctcgggc aaatccgctt ccctgaccgc
     7141 cgcccagcgc ggcaggggcg cgtgttgcga atattttttg acaaactgct tcacaatgcg
     7201 gtcttccaac gaatggaaag caatgaccgc caaacgtccg ccctctttca gacgacacat
     7261 gacctgcggc aatactgccc ctacttcttc aagctcgcgg ttaataaaga tgcggattgc
     7321 ctggaaggtg cgcgtcgcag gatcctgccc ccgctcgcga gtacggacgt tttgtgccac
     7381 gatctgcgcc agcttgcggg ttgtatcgat tggactttcc gcccgttgcg caacaatggc
     7441 gcgcgcaatc tggcggctaa accgctcttc accataattc ttgattacct cgtgcaaatc
     7501 ctgttccgac gcaaccgcta tccactctgc ggcagacata ccgcgcgtcg tatccatacg
     7561 catatccaaa ggggcatcga aacggaagct gaaaccgcgg ctgccgtcat cgatttgcgg
     7621 ggacgaaatc cccaaatcaa acagcgcacc gtccaccttg ccgataccca aaccgtccaa
     7681 tgccgtctga aacgaagcaa aaccgccatg cacgacaccg acccgtttgt ccgaacgcgc
     7741 cagctcttct gccacagcaa tcgcctgcgg atctttgtcg aaaacaatca accgccccgc
     7801 atcgcccaaa cgcgacaaaa tcagccggga atgccctccc ctgccgaacg taccgtccac
     7861 atagacaccg tcttcgcgca cggcaagcgc atccaccgcc tcattcagca agaccgtgat
     7921 atgccggtaa ctttctgctc cactcacaat tgcaaatccg tctgacccaa ctggaaggca
     7981 agttcgtcag gatcgtcatc caaagcctga accatctcag cctcccactg ctcgcgaccc
     8041 caaagctcca aacggttggc acggccgacc aaaacgactt cacggtcgaa atccaccctt
     8101 ttcctcagtc cggcaggaag cagcacccgg ccggcgctgt cccattccaa aatttccgcg
     8161 ttatgcagca aaagattttg aaaccgccgc aaaacagggt tatccgccac ttttaagttt
     8221 aaaagttgcg ccgcaacctt ttcccactcc gcaacagggt acatcaacag cttgtgtttc
     8281 gactcgagcg ttaccactac ggcaggcgta tagaggcgcg acagaatgtc acggaatttg
     8341 gcaggaacag ccaaccgccc cttactgtcg atgcttaatt cgtgtgcgcc gccgaacatg
     8401 acatgtccca agccgaaatc aaaatcacaa gggtaaaaga gacactttgc cccacaattc
     8461 cccaccaatc gacactataa gaaattttaa acactcggtc aaatcagggc atgaaaactc
     8521 attaacatat ctgaaatttt tattcctttt aaaaacaata agataaaaaa tgacgacaac
     8581 ggcacggcgg gtgcggtaca gaataatcga accaataaac aactatatat gattaattta
     8641 ataatataaa cacaatatat agtattaaga taaagccatg acagcacccg caccaacgtg
     8701 taatatgtcg ggaaatccaa taaatttaca caagctaaca cttatcatgc ccctccccct
     8761 cccctctccc gaagcacggc aattctcgct caaactgcaa accctcattg ccgaaaaaat
     8821 cggcaaacac ggcaactgga ttccattttc acgttttatg gaattggttt tatacgctcc
     8881 gcaatacggc tactacaccg gcggcagcca taaaatcggc aataccgggg attttattac
     8941 cgcaccgacc ctcacctctc tgtttgcaca gacactggca cgccaacttc aagaacttct
     9001 atcccaaacg gcgggcaata tctatgaatt cggcgcggga accggacagc ttgccgccga
     9061 tttgttgggc agcatttcgg acggcatcag ccgttactat attattgaaa tatcgccgga
     9121 gctggcagca cgtcagaaaa acctgattca agcacgcgca ccggaagcat ctcaaaaagt
     9181 tgtccacttg accgcacttc ccgaagcgtt tgacggcatc atcatcggca acgaagtact
     9241 cgatgccatg cctgtcgaaa tcgtccgtaa aaatgaaggc ggctcattcg agcatgtcgg
     9301 cgtttgccta gataatgacc gttttaccta ttcggcacga ccgctgcacg acttacagct
     9361 atctgccttg gcttccctct attttcctca aacagattat ccctacacca gcgaactaca
     9421 tccgcaacaa tatgccttta tccgcaccct tgcctcaagg cttgaacgcg gaggtatgat
     9481 attcatcgac tacggttttg atgcagcgca gtattaccac cctcaacgca atcaaggtac
     9541 tctgatcgga cactaccgac atcacgttat ccacaatcct tttgacttca tcgggttggc
     9601 cgacctgacc gcgcatgtca actttaccga cattgcccaa gccgggacgg atgccggatt
     9661 agatttgata ggttaccttc cccaatccca tttcttattg aacctgggca ttaccgagct
     9721 attggcacag acggggaaaa cggattcggc agcctatatc cgtgaagctg ctgccgttca
     9781 gaaactgatt gaccagcatg aaatgggcga actgtttaaa gtcatcgcat tcggaaaaaa
     9841 tatcggcgtc gactgggcag gattccgctt cggcgacatc tgccacaaac tctaaccctc
     9901 atgccgcctg aatccgcttc agacgacata aactttttaa catttaaaaa cagtcaacta
     9961 attcaaaatt aaaaaatacg gcttgtcaaa aaaacagaaa aacatataat agcgtcttca
    10021 cgaaacggcg aattagctca gtcggttaga gcagaggaat cataatcctt gtgtccgggg
    10081 ttcgagtccc tgattcgcca ccaaattttc gggggtatag ctcagttggt agagcgcttg
    10141 catggcatgc aagaggtcag cggttcgatt ccgcttacct ccaccagata aaaaagcaca
    10201 gaccgtaaaa aggtatgtgc ttttttattg cctgattgcc agcaaataaa gaataaacca
    10261 ctgccttcaa aacaggcaat cgactttaaa cctatcgccc cgcctgtcct gattttatag
    10321 tgaattaaat ttaaaccggt acagcgttgg ctcgccttgc cgtactatct gcggcttcgt
    10381 cgccttgtcc tgatttttgt taattcacta tatcagcccg ccagacaaac ccgacccgaa
    10441 taatgtcttc aggtcgggtt tatggtttca ttcccaactt atccagcctg acagccacaa
    10501 tataatgatg gcaataccaa aaacaatgcg gtaataggca aaaggaatat aatttttctt
    10561 ggaaacaaac ctcagcaacg cttttaccgc taccaagcct gaaacaaagg cagcaataaa
    10621 gcctatcaga atcaaaccga catcatgcag ggtgaaaaat cggtaatgtt tcaggacatc
    10681 ataagccgtt gcggcaacca tcatcggcac agccaagaaa aacgagaatt ctgtcgcagt
    10741 tttccgttcg atgccccaaa gcatcccgcc cataatcgta ctgcccgaac gggacgtacc
    10801 cggaaccagt gcaaacactt gggcaacgcc gatcatcaag gcatcaatcg gacgcaatgc
    10861 atcaacatcg gcaattttag gctctgctcg gctttggcgt ttctccaccc acaaaataaa
    10921 aaaaccgccc aaaaccagca tgactgcaac actcaagggg ttaaacagat actctttgat
    10981 ttgtttgccg aacaacagcc ccatcacggc ggcaggtata aaagcaatgg caagattaag
    11041 gacgaagcgg ttggctttcc ggtcttttcc caagccgtgc aacacattgc tgaaacgttg
    11101 ccggtattca aacactaccg ccaaaaccgc accgagctgg atggcaattt caaaaacctt
    11161 gtgattgctg tgaaaaccaa tcagattgcc gaacacaatc aaatgtccgg tgctggaaat
    11221 cggtaaaaat tcggtaaaac cttctaccaa gcccatcatc agggctttca ggacaatcag
    11281 aaaatccatt gcttgcgctt ctttcggata cgggagttcg gctatttctg tacagcaggg
    11341 gtctgacgct tgcgttcttc cctgactttg gcaaccaatt ctttaatcgt atgaacgccg
    11401 ccgtcaaagc cgttattgaa gataacgcgg tattttccgc cgacaataac ggtcggcgtg
    11461 ctgtcgatgc ggtattgttc cgtcagtttc tgcattttta atgcggcggc ggcagcttcg
    11521 ggggaatcat aggcgcgcat cagttttttg ccgtcaaagc ctttttgaga caaagcccat
    11581 tttccggcaa cagccctgtt ttccaagcgg attttttgtt cgtaaactgc tttaaacacg
    11641 gcagggtttg cctgatattt caaacccgac aaattgacgg cagccgccat cctggccaga
    11701 ccgagcattt caggctgcca gaccacgtgc tccgtcctca aataggcatc agacggcaat
    11761 gccttgccca gtttcaataa caaaggatcg aaatgatggc aatgtacgca gaaatagccg
    11821 aaaaattcca aaacctcaat tttacccgac tgttcttgag gaatgggttt atccaacaca
    11881 agatagtctt ccccttccgt cagggcatat gcctgcgcgg acaacgctgc cgacagcagc
    11941 agcggcaaca gatgtttgag cttcataatt atttactttc gatagaacgg atcaggctgg
    12001 cgacttcatg ttttttcaac tcgtcctgca tttttttcac cgcatcggca gacatattgc
    12061 cgctttgcac ccggtaaagc gttttatgtc ccgcctgata accgaccacc ttggaagata
    12121 tgcccaagat tgccagtttg gcacgctgtc cttccgcgct ccggcggtcg gcatacgcgc
    12181 ccatttgcag ataatgcgtt gcttccgcct tgtcgggcgt tttcattttc tgcacttctt
    12241 tggcagcggc actgcgcgct ttttcgatgc tgccgctgtt gaggatttgt tccggggtcg
    12301 gtttgggtgc aactttttcc ttctccgcct ttttctcttc ttttgaagct tttttctctg
    12361 tttctttaga tggttttacc gcttgttttt taaccgtttc ggcatctttc ttctgcgctt
    12421 tttccccgac ggtttgttca cgctcttccg tcagtgcttt cttgcgcact gcctgtccgt
    12481 ccgacttttc ccgctccggc tcgtccgcct tttcctcaac ctcgtcggct ttgtcggcaa
    12541 cgggctgctt gtcggcagct ttttccgcat ccgactgctc tgcctctttc gcagcatccg
    12601 gttcggacaa ggcgttttga tcggccggtt caggttggat gtcttcctta ggctggtttt
    12661 tcggtttcag gatttccgtt tctgcaggct gcttcgacgg aaccgggatt ttgaacgcat
    12721 tttgaccgct ctggttcaga taaaacaaaa taccggcaat aatgaccgtc gccagtatca
    12781 aaccgaagaa aaaaccggac agaccttttc cggattggga aaatttgttc ataaacatac
    12841 cttaatgtgt ttcagacggc attaacgccg tttgcttacg ggcggatatt ctaacaatat
    12901 cgccatattt gggcaaaacc tgcttccatt cccattccta taaagcacga cggaaaccta
    12961 tggctttcat gacgtggctt ctgccgactt cttcgtcgcc cgccaaatcc gccaatgtac
    13021 gcgccacgcg cataatgcgg tggaagctgc gggcggaaag ggagagtttt tccagcaggc
    13081 cgcccaatgc ttcctgcgct tctttttgaa tgcgggcttg ggaatcgagt tcgctgacac
    13141 tcaaagcggc gttgactttg ccctgccgcg cgtattgttt gtcgcgggcg gcgataacgc
    13201 gttccaaaac ggacgcgctg ctttcacccg cttcctgctg catcagttcg gcggcggaca
    13261 ggctggggac ttcgatggtc aaatcgatgc ggtcgagcag cgggccggaa attttgctgc
    13321 ggtaacgcgc gacgctttcg ggcgtgcagc ggcagggttt gacgggatgc ccgagataac
    13381 cgcacgggca ggggttcatg gcggcaacaa gttggaattt ggcaggatag acggcttggc
    13441 gcgccgcgcg ggaaatgtgg atttcgccgt tttccaacgg ttcgcgcaaa acttccaaaa
    13501 ctttgcggtc gaactcgggc agctcgtcca aaaacaatac gccgtggtgc gccaatgaaa
    13561 tctcgcccgg acgcgggtcg gaaccgccgc cgaccatagc cgccgcgctg gcactgtgat
    13621 gcggactgcg gaaaggacgg tggctgtcga gttgttgctg gtggttgggc aggagcgaac
    13681 gcaatgccca aacttcaacc aattcgtctt cggtcagcgg cggcaggatg cctggcagcc
    13741 gttgggagag catagacttg cccgttcccg gcggacccat catcaagagg ctgtgtccgc
    13801 ctgcggcagc gatttccaaa gcaaggcggg cagtgtgctg acctttcaca tcacacaaat
    13861 caggttgtcc gccatgttca gacggcattt gcggtacgga acattcggtt tgcgccaaag
    13921 gttcgatacc gttcaaatgg gcggcgactt cgcccaaaga gcgcgcgccg taaacggtaa
    13981 tgccgcgcat cacggcggct tgtcctgcgt tttcttcagg caaaacaaat gcacgttttg
    14041 cctgcatacc ctgccacgcc atcgccaacg cgccgcgcac ggggcgcaac agccccgaca
    14101 gtgccaattc ccccgcaaac tcgtattccg ccagtttttc gggcgcaacc tgccccgatg
    14161 cggcaaggat gccgattgca atcggcaaat cgaaacgccc cgactctttg ggcaggtcgg
    14221 cgggggcgag gttgacggtg atttttttgg cggggaattc aaaaccgctt tgaataatgg
    14281 cggcacggac gcggtcgcga ctttctttga cttccgtatc gggcagtccg acgatgttga
    14341 aatgtggcag gccgttggca aggtgggctt ccacttcgac caacggcgca ttcataccgc
    14401 tcaaggcgcg gctgtaaacc aaggcaagcg acatatttca gacggcctta ttcgccggct
    14461 tcggtttgct gcctgatttc ggcgacggct tcttcggcag cggcttcagc cgcttccaat
    14521 gctgcccgtt cgggattttg cgcggcttcg agttttgcca aacgcgcttc caaagccgcc
    14581 agtttggtac gggttttgat taaaacctgc tgctggatgt cgaattcttc gcgcgtaacc
    14641 aaatccatac ggttgaacgc gccgcccagc atcgccttaa tatttttttc cacatctttg
    14701 gcagggctgt tgacgatggt ttcgctgatt ttcgaaccga cttcttcaaa aagctgcttg
    14761 ccgaacataa tctgtatcct tcctgaacat atcaaattca atcggctatt gtataaggaa
    14821 aaatgccgtc tgaaaacggg cggcggataa tcggcaaaac ataccgcgcc tcctttgcgg
    14881 ttgctaaatt acacctcaaa acacctgccg cctgaaaacg gatttcatat tccgcgcaac
    14941 gccagattac aagacactac aaaacaatat actgttttaa atgatttttc cgacgcgcat
    15001 cgtttcaaac tcggcttttt aagccattaa gtgctttgca aacaacagaa attgggttat
    15061 gctgaaacgg attatttaca atttcatata gttttattac atatcttatt gtgattgaag
    15121 ataatttatc cgaatccccc tttcgggtat ccggattttc cgttgtactt ttatttagaa
    15181 aaacatttca ggcgcaagtt gcttgcaatt tcaaagcctg taattctgaa gttttagacg
    15241 aggaatagca catgaatccc atgtacatta cttttgcaat ctatctggtt gcagtccttc
    15301 tcatcgggct tgccgcctat ttttctacgc gcaatttcga cgattatatt ttgggcgggc
    15361 gcagcctagg cccgtttgtt accgcgatgt cggcaggcgc gtccgatatg tccggctggc
    15421 tgctgatggg tctgccgggc gcgatttacc tgagcggttt gaatgaggct tggattgcca
    15481 tcggcctctt ggtcggcgcg tatttcaact ggctcttggt ggcgggccgc ctgcgcgtgc
    15541 ataccgaata cgccaacaat gcgctgacgc tgccggatta tttcttccac cgcttcggcg
    15601 cgggcggaca cttgatgaaa gtggtttccg cactaattat cttgtttttc ttcacaattt
    15661 actgtgcttc cggcattgtg gccggcgcaa ccctgttcca aagtctgttt gaaggtatga
    15721 cttacaacca ggcaatgtgg ctgggtgcgg gcgcgaccat cgtctatacc ttcttgggcg
    15781 gtttcttggc agtcagctgg acggatacgc tgcaagcatc tttgatgatt ttcgccctga
    15841 ttttaacgcc ggtgatggtc tatctgggct tgggcggcgc ggaacagatg tctgccgcga
    15901 ttcaaagcgt cgccgcaggc acgggcaaag aatacggcag cctgtttgcc ggtacgaccg
    15961 tcatcggcat catttccacc gccgcatggg gcttgggcta tttcggacag ccgcacattt
    16021 tggcgcgctt tatggcggcc gaaagcgcga aatcgctggt atccgcacgc cgcatcggca
    16081 tgacttggat ggcgttgtgc cttgcgggcg cggtagcggt cggttatttc ggcattgcgt
    16141 atttcggtgc aaatcccgac aaagtttctt ctatgagcgg caaccacgaa cgcatcttca
    16201 tcgcgctttc caccctgctg ttcaaccctt ggatcgccgg cattattttg agcgcgattt
    16261 tggcggcggt gatgtccacc ctgtcctgcc agcttttggt ttgctccagc gcgattaccg
    16321 aagacttcta caaaggcttt ttgcgtaaaa acgcgcaaca gtcggaactg gtatgggtcg
    16381 gccgcctgat ggtcttggcg attgccgtga tttccatcct gattgcttcc gatccgaaca
    16441 gcaaagtatt gggactggtg tcttacgcgt gggcaggttt cggtgcggca ttcggcccga
    16501 ttgtgattct gtccgtattg tggaaacgca tcactgccta cggcgcgttg tcgggtatgg
    16561 ttgcaggtgc cttaaccgtg gtcgtatggg cggaatgggt gaaaaaaccg gctcaagcgg
    16621 caggcgaaag cggcttgttg acgatgtacg aaatcgtccc gggctttatt gtttgcttga
    16681 tcgttgccgt gttggtttcc ctgttcaaca aagaaccttc gcgcgaaacc caagaacgct
    16741 ttgaaaaagc cgacgcagat taccgcgccg cccgataaac ccctttcaga cggcacggca
    16801 tcccggttcg tgccgtctga acccgtttcc gggtcaaaca caaataaacc ttgcctgcat
    16861 acaggcctta tttgtgtttt acccgtttca ttttcaaaga aacggaagca cctaccctgc
    16921 ccgcatttga agccttgtat ttcatctgcg gatttattac gatattaccg tattcagacc
    16981 gcaccgatgc cgtctgaacc ccccgaaaaa ctttggagaa tccaaaaaat gtttcatttt
    17041 gcatttccgg cacaaactgc cctgcgccaa gcgataaccg atgcctaccg ccgtaatgaa
    17101 atcgaagccg tacaggatat gttgcaacgt gcacagatga gcgacgaaga gcgcaacgcc
    17161 gcctccgagc ttgcccgccg tttggttacc caagtccgcg ccggccgcac caaagccggc
    17221 ggcgtggatg cgctgatgca cgagttttca ctctccagcg aagaaggcat cgcgctgatg
    17281 tgtctggcag aagccctgct gcgtatcccc gacaacgcca cgcgcgaccg cctgattgcc
    17341 gacaagattt cagacggcaa ctggaaaagc catttgaaca acagcccttc cctcttcgtc
    17401 aacgccgccg cctggggcct gctgattacc ggcaaactga ccgccacaaa cgacagacaa
    17461 atgagttccg cactcagccg cctgatcagc aaaggcggcg caccgctcat ccgccaaggc
    17521 gtaaattacg ccatgcgcct gttgggcaaa cagttcgtaa ccggacagac cattgaagaa
    17581 gccctgcaaa acggcaaaga acgcgaaaaa atgggctacc gcttctcctt cgatatgttg
    17641 ggcgaagccg cctacaccca agccgatgcc gaccgctact accgcgacta tgtcgaagcc
    17701 atccacgcca tcggcaaaga tgcggcagga caaggcgttt acgaaggcaa cggcatttcc
    17761 gtcaaactct ccgccataca tccgcgctac tcgcgcgccc aacacggccg tgtgatgggc
    17821 gaactgttgc cgcgcctgaa agagctgttc cttttgggta aaaaatacga tatcggtatc
    17881 aacatcgatg ccgaagaagc caaccgtctg gagctgtctt tggatttgat ggaggcactc
    17941 gtttccgatc ccgatttggc aggctacaaa ggcatcggtt tcgttgttca agcctaccaa
    18001 aaacgttgtc cgttcgttat cgactacctg atcgaccttg cccgccgcaa caaccaaaaa
    18061 ctaatgatcc gcctcgtcaa aggcgcgtat tgggacagcg aaatcaaatg ggcgcaagtg
    18121 gacggcttga acggctatcc gacctacacc cgcaaagtcc acaccgacat ctcctacctc
    18181 gcctgcgcgc gcaaactgct ttccgcgcaa gacgcggtat ttccgcaatt cgccacccac
    18241 aacgcctaca ccttgggcgc aatctaccaa atgggcaaag gcaaagactt tgaacaccaa
    18301 tgtctgcacg gcatgggcga aaccctgtac gaccaagtcg tcggcccgca aaacttaggc
    18361 cgccgcgtgc gcgtgtacgc cccggtcggc acacacgaaa ccctgctcgc ctacttggtg
    18421 cgccgcctgt tggaaaacgg cgcgaactcg tctttcgtca accaaatcgt cgatgaaaac
    18481 atcagcatcg acacgctcat ccgcagcccg ttcgacacca tcgccgaaca aggcatccac
    18541 ctgcacaacg ccctgccgct gccgcgcgat ttgtacggca aatgccgtct gaactcgcaa
    18601 ggcgtggact tgagcaacga aaacgtattg cagcagcttc aagaacagat gaacaaagcc
    18661 gccgcgcaag acttccacgc cgcatccatc gtcaacggca aagcccgcga tgtcggcgaa
    18721 gcgcaaccga ttaaaaaccc tgccgaccac gacgacatcg tcggcacagt cagctttgcc
    18781 gatgccgcgc ttgcccaaga agcggttggc gcagccgttg ccgcgttccc cgaatggagt
    18841 gcgacacctg ccgccgaacg cgccgcctgc ctgcgccgtt tcgccgacct gctcgaacag
    18901 cacacccccg cgctgatgat gcttgccgtg cgcgaagcag gcaaaacgct gaacaacgcc
    18961 attgccgaag tgcgcgaagc cgtcgatttc tgccgctact acgcaaacga agccgaacat
    19021 accctgcctc aagacgcaaa agccgtcggc gcgattgtcg ccatcagccc gtggaacttc
    19081 ccgctcgcca tctttaccgg cgaagtcgtt tccgcattgg cggcaggcaa caccgtcatc
    19141 gccaaacccg ccgaacaaac cagcctgatt gccggttatg ccgtttccct catgcacgaa
    19201 gccggcatcc cgacttccgc cctgcaactc gtcctcggcg caggcgacgt gggtgcggca
    19261 ttgaccaacg atgcccgcat cggcggcgtg attttcaccg gctcgaccga agtggcgcgc
    19321 ctgatcaaca aagcccttgc caaacgcggc gacaatcccg tcctgattgc cgaaaccggc
    19381 ggacaaaacg ccatgattgt cgattccacc gcacttgccg aacaagtctg cgccgacgta
    19441 ttgaactccg ccttcgacag cgcgggacaa cgctgctccg ccctgcgtat cttgtgcgtc
    19501 caagaagacg ttgccgaccg tatgctcgac atgatcaaag gcgcgatgga cgaactcgtc
    19561 gtcggcaaac cgattcagct cactaccgat gtcggccccg tcatcgatgc cgaagcacag
    19621 caaaacctgt tgaaccacat caacaaaatg aaaggcgttg ccaagtctta ccacgaagtc
    19681 aaaaccgctg ccgatgtcga ttccgaaaaa tccacgttcg tccgccccat cctgtttgaa
    19741 ttgaacaacc tcaacgaact gcaacgcgaa gtcttcggtc ccgtcctgca cgtcgtccgc
    19801 taccgcgccg acaaactcga cagcgtcatc gaccaaatca acagcaaagg ctacgccctg
    19861 acccacggcg tacacagccg catcgaaggc acagtacgcc acatccgcag ccgcatcgaa
    19921 gccggcaacg tttacgtcaa ccgcaacatc gtcggcgcag tcgtcggcgt acagcccttc
    19981 ggcggacacg gtctgtccgg cacaggcccc aaagcaggcg gttcgttcta cctgcaaaaa
    20041 ctgacccgca tccccgaatg ggttgccccg accctgagcc aaatcggaca ggcagacgaa
    20101 gccgcgctca aacgcctcga agcactggtt cacaaactgc cgttcaacgc cgaagagaaa
    20161 aaagccgcag cggccgcttt gggacacgcc cgcatccgca ccctgcgccg tgccgaaacc
    20221 gtccttaccg gcccgaccgg cgagcgcaac agcatctcat ggcacgcgcc aaaacgcgtc
    20281 tgggtacacg gcggcagcct cctgcaagcc ttctgcgccc taaccgaact tgccgcctcc
    20341 ggcgtacagg cagtggtcga acccgacagc ccgctggctt cctacaccgc cgacttggaa
    20401 ggtctgctgc tggtcaacgg caaacccgaa accgccgaca tcagccacgt tgccgccctg
    20461 tcgcctttgg acagcgcgcg caaacaggaa cttgccgccc acgacggcgc actcatccgc
    20521 atcctccctt cggaaaacgg actcgacatc ctgcaagtgt ttgaagaaat ctcttgcagc
    20581 gtcaacacca cagccgccgg cggcaacgcc agcctgatgg cggttgccga ctgattttac
    20641 cgaaatcccc gagcgcggcc cgtgaaccaa tgccgtctga aaacctttca gacggc
//
LOCUS       DAWKOX010000017        19819 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.017, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000017 DAWKOX010000000
VERSION     DAWKOX010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19819
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.017"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(203..278)
                     /locus_tag="WJK78_000437"
     tRNA            complement(203..278)
                     /locus_tag="WJK78_000437"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(243..245),aa:Asn,seq:gtt)
     gene            complement(371..730)
                     /locus_tag="WJK78_000438"
     CDS             complement(371..730)
                     /locus_tag="WJK78_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ7597406.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(753..1397)
                     /locus_tag="WJK78_000439"
     CDS             complement(753..1397)
                     /locus_tag="WJK78_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ7597407.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADA
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1399..1935)
                     /locus_tag="WJK78_000440"
     CDS             complement(1399..1935)
                     /locus_tag="WJK78_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ7597408.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDENTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1947..3044)
                     /locus_tag="WJK78_000441"
     CDS             complement(1947..3044)
                     /locus_tag="WJK78_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ7597409.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTSSQSQSRGLLQRLMKKLLGS"
     gene            complement(3047..4483)
                     /locus_tag="WJK78_000442"
     CDS             complement(3047..4483)
                     /locus_tag="WJK78_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ7597410.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQYADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="WJK78_000443"
     CDS             complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="WJK78_000443"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ7597411.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVHLTYHPLFFIARYSAAGRQ"
     gene            complement(5473..6120)
                     /locus_tag="WJK78_000444"
     CDS             complement(5473..6120)
                     /locus_tag="WJK78_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ7597412.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFDEIHQELIALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="WJK78_000445"
     CDS             complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="WJK78_000445"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ7597413.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENCKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFSRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKGTSRIRLSLTADMTMDEVRQFAACL"
     gene            7495..8571
                     /locus_tag="WJK78_000446"
     CDS             7495..8571
                     /locus_tag="WJK78_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ7597414.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8778..10244)
                     /locus_tag="WJK78_000447"
     CDS             complement(8778..10244)
                     /locus_tag="WJK78_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ7597415.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFIGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10442..11365)
                     /gene="speB"
                     /locus_tag="WJK78_000448"
     CDS             complement(10442..11365)
                     /gene="speB"
                     /locus_tag="WJK78_000448"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ7597416.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGIIDPAHSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11464..13356)
                     /gene="speA"
                     /locus_tag="WJK78_000449"
     CDS             complement(11464..13356)
                     /gene="speA"
                     /locus_tag="WJK78_000449"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ7597417.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13523..13807)
                     /locus_tag="WJK78_000450"
     CDS             complement(13523..13807)
                     /locus_tag="WJK78_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ7597418.1"
                     /translation="MKKLLLAAVVSLSAATAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13958..15766)
                     /gene="aspS"
                     /locus_tag="WJK78_000451"
     CDS             complement(13958..15766)
                     /gene="aspS"
                     /locus_tag="WJK78_000451"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ7597419.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGAENGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(15824..16525)
                     /locus_tag="WJK78_000452"
     CDS             complement(15824..16525)
                     /locus_tag="WJK78_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ7597420.1"
                     /translation="MTEPEAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16668..17816)
                     /locus_tag="WJK78_000453"
     CDS             complement(16668..17816)
                     /locus_tag="WJK78_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ7597421.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPTVSAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="WJK78_000454"
     CDS             complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="WJK78_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ7597422.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18543..19685
                     /locus_tag="WJK78_000455"
     CDS             18543..19685
                     /locus_tag="WJK78_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7597423.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5101 a         5117 c         4599 g         5002 t
ORIGIN      
        1 caatgccgta ctggtttttg ttaatccact ataaaatcga gtttatccta gctgtccagg
       61 acagccccta ttttttcata accatcacga aaggaatttt gcaaagattt tattccatct
      121 caaaacaatc atctcaaaaa tgcgtttctg accgccggta aaacaaaacc ctctaagaaa
      181 atacttagag ggttttgaaa tttggctccc cgacctgggc tcgaaccagg gacctgcgga
      241 ttaacagtcc gtcgctctac cgactgagct atcggggaat aagcgcgaat aataaaacag
      301 aaataccgaa cgtgtcaata taaattgaca atcgattgca ctttatctgc aagcccgcaa
      361 tctttatatg ttatatggct tccgcaatat gccttgccgc acgtttggca tccaatagga
      421 ttaaaccaag tctgccggtt tcttttgcca ccagcaccaa cacggcatct ttacccgcct
      481 gacttaaaag gatatagcct gattttcctt taatcatcac ttgttccaat tccccgcagg
      541 cgagttcctg caccgagcga ctccccaaag caagcaaagt ggcagaaatc gcccctaccc
      601 tgtccgaatt caaatgtgaa ggaagcattg tcgccatcgg caatccgtcg gttgagataa
      661 cggcagacgc gataatatcc gtagatgtat tgtttaaatc ttcaaggatt gaaatcaata
      721 attgctgcat aacccctcct ctctcccaag ttttacacgc ggttgctgta acggcggtat
      781 aaaatcctta ccaaagtaac aaatgcctct ttgcccaaat cgggaatgcc gccgataacc
      841 aaaataaatt tggttgaacc gatatacaat gggaaaaatg tcaattcgct ctgaccggaa
      901 ggatcgcaaa cgccccaagc gttattgttg atatacaggt tgttcttaat cagcagccgg
      961 tatttctttt ccatctgtgc gacttctgcc gccaacaacc ccaactcttc cgccgcctca
     1021 tgatggaaat tggcgttggc aagatacaga ccgttccgat cgaccaataa cgccttaccg
     1081 ctgccggaca attgttccat cagcaacggc aattgctcgt ccgacaaatt gatgccgtct
     1141 gaatgaccgt tttcatcgcc atagaggaat tcgagttttt gcaaacggta caacaggttc
     1201 aaagcggtat cgatgtcggc ggtgtccgcc caggtaagca gcttctcact gctgaccatt
     1261 tcgtccgcat ccgctttcaa caggctgtgc aacaaagttt taccggcact gggggcatcg
     1321 ctggatacgg cataaaatgc accggcagga gtcaggcggg gatataaatt tgcttgtagt
     1381 gaaagtgttg attccatatt aaacctccag tcccggatca atagaaaata acattgcgct
     1441 aaccaattgt tttacgtcat cttccttacg ggcatcaatt tcaaaaaccg gaacattaag
     1501 attatgtttt gcaagatatt tgtgatacac gtcgataccg ggctgagagc gtatatccat
     1561 cttggtaata ccgacaacga cgggtgcctt ctccagcagc cctcgaaacg aatgtaaaaa
     1621 gaattccaaa tctttcaacg gattggttcg ggcattatct aaaagcaaga ccaaacccat
     1681 actgccttgg cttaagattt cccacataaa gttgaaccgt tcctgaccgg gcgtaccata
     1741 taaatggact ttggtattct catccaagct gatggccccg tagtccatcg ccactgtcgt
     1801 attccttttc ctatccaaag tcatatcgga tgcggaagca tcggtctgaa cgagtgcttc
     1861 gtccgaaata gccgcaatgg cagtggtttt ccctacgccg acaggtcctg tgaaaataat
     1921 tttattttct ctcatctctc cgcctcttag ctgcccaaca gttttttcat cagcctttgc
     1981 agaaggccgc gcgactggga ttgggatgat gttgtgattt tttccgcttt tttcatcatt
     2041 tcactatcag aggcagaatc ggctccgata tttattttat ccgccatatc ggagtatgcc
     2101 tgttgtgaaa ccgtttttaa atctaccgac aaaaacccgg ttgtataggt tgccgcaaga
     2161 taattcagaa tatcattgag gtttaaaggc atcactttat acaacacgtt aaggttgacg
     2221 gatgccttgg tcagaaatgc cgacaagcgt atcgaccccg gcacatttgc caaccgggtc
     2281 aggtttggcc aagatttcaa cgtaaacgga gtatcgggag aaatcggata aatcaacctg
     2341 ccctgcgctg tccaaatgga aaactgccac atacaggaca taatgcctac tttagccttt
     2401 tcgcgccatt gcgggttatc gggaacagtc ttgcagctga cctgcaaatt ttcgtctttg
     2461 cacaattctt cgagtttttg cacactttct gtcagcaaaa cccgttgtat cgaggggaaa
     2521 acaataagga ccggcttatt tccatgcaag atagcgatgt cctgcctgtt cttttccgca
     2581 aaccgcaacg cccccaataa tcctttattc gggttaaact ggcgtatcgt aaccgtacgc
     2641 tgcacattcc cgttattttt cgccgaccgg tctgcgggtg caataaacga tttcccataa
     2701 acattctcgc cctgcaacaa tttgcggagc ataggaaaca atgtttcaaa ccgaatcggt
     2761 ttgggcaggt agggaacttc agaatcggga actttctccg aacagacggc gacgggtata
     2821 tccttataac gctcggcaag ctctttccaa agttcaaaac cgccctcggc atcggtatcc
     2881 gccaaaacca aatcgggcac ggcactgccg tctgaagggg atactgtttc ataacgggtg
     2941 gtattgtgca ttttgaatgc cattttgaaa acggattcct gctgcgccgt catccccgcc
     3001 aacattacgc gtactgtttt aattttcggc agttgaactt ccatttttat tttccgtacc
     3061 gttttatttt tttaatattt tgattcatac gctgcagcag ccggctcatc agcataacga
     3121 cctcttcagg aagcctgtcc gcacgttccc tcaataccct taaaaactgc cccaacctat
     3181 cccaatcttc agtacgttca taaatatcga tcaacgtaat ataaagctgg gactcgtcgg
     3241 gatatttcaa taccgcctgc tccaacacat ccattgccgc ttcaatctga ccatacatca
     3301 gcaacgactc tacttcctta accgcatcgt ctgccggaga cgaaccggtg ttgatcaacg
     3361 aagaatcttg aagcaccaaa tcccgatgtt gcgatttgaa tttctgtata tttttcggca
     3421 gatacccgtg ccccataccg atgtctttga tttgccggtc gttcggccct ttttccaaat
     3481 catcgaaaac ctcatggtaa cccaggctgt acccccaccc cagcatccgc tctttaacct
     3541 gcctgccgta gttgcccaac gtttggtaaa gtttccacaa atgtccggca aaacggtcta
     3601 tgtccgcgta ttggtaatcg agtttcaacg catcgataat caggtttgca ggtttttcgg
     3661 aagtttggat ggcacggtcg tattgtttcg atgccgtttc atagctgact ttgtctttaa
     3721 ggattttcgc accttgatcg gcacggacca aaccggcaat cgcaccgatt tcctcttgac
     3781 tgattccgga cacgtctttt ttgccccgca caatcgggat gcgcttgatt tcttcggctt
     3841 cataagcctt accgccggca tccggcgggg gcgatgcgga agctgccgtc gcagaaccgc
     3901 cttccgcacg tttttcaatc tcctgagtac cccatcccaa accttcttcc gccaagacgc
     3961 ggatacgcaa atggtttgaa tcgcgctgta atgcctgttc gatatatttt gccaaaagtt
     4021 cggaaggaat cagtttgccg tatttttgca gattgtctgc caaaacatcg acatccccca
     4081 cttcgagatt gatatcgagc agctcgcgga taaggttttc aggtttcgct tcaccatccg
     4141 gaatgccgtc cagataggca gccaaagatt cggcagcctt gccctgataa ccgaattgct
     4201 tataaacctg atactccgta agcggatcga cttcttgcgc ggatacggcg gcggatgcgg
     4261 tctcggcact ttcgttccaa gaccagtcgg gttgcgtgcc gtctgaaacc gattgtccaa
     4321 tctgatcgac ccagtccgaa tcattgcttc cgggtgtctg cccctgcgta ttgccgacac
     4381 cttgggattt gcgcttcggt gttttcttac cctgcttcgc acgcataacc aaaagcatca
     4441 gcaataccgc cagtgccaaa ccgataatta atgagttttc caaaggatac tcccgatacc
     4501 gtaacgagcg gatagctgac cgcctgcaac ggccattgtc cgcttttatt attaacgatt
     4561 tactgaaata gacttgtaag ttttaaatca taccataatt taacgtttaa caatatgcct
     4621 tctgcacaag cctcgccata ttacctttta cccacatcag tatcaatacc cgatataaaa
     4681 ataactttgc ccataagctg ccttattgcc tgcccgccgc agagtagcgc gcgataaaaa
     4741 ataacggatg ataagtcagg tgcactttgc ccgacggcat actgaacgcc gacaagtaat
     4801 cgccaataaa tccattgaga ttttttcttg tccaattttt ttggttcgtg gctgttacgc
     4861 ctgtatattt aaggtgtttg agtacatcta acggcgtatc aaagtctagt attaccttaa
     4921 aatcctcaca ccataaaagc tcaaaatctt tggctaacca agtctgccat tgggataaag
     4981 tcgggtaatt taagcctata tttgtaattt ggcggacttc ttttaaattg tctttgccaa
     5041 aggttgcaac cgccaataat ccgtttgctt tcaagcctgt tttgcaatgg gcgataaaag
     5101 cgtcgggttg atgaaaccat tgcacggcag atgcgcttgc gattaagtca aattgtcgtt
     5161 gaaaaggaaa gttttccgca tcgccgcaat aaaaatcaaa ggattgcggc agtttttcag
     5221 ccagttgggg ctgcacatcg cacaaatcat taaataacca ataattcgct gaaatctgtt
     5281 tttgcagcaa ggcactcaac attcctgagc cgcagcccaa ttccaacacg ttttccaatg
     5341 gcatatccgg caaataatct tgcaaatgcg ccattagatt aatcgtcatt ttttgttgga
     5401 ttaaggcgtg ccggtcataa tcgtttaatg ctttttggaa agcctgccga atgcgcgatt
     5461 tatttatggc agtcagtgat tccatagtgc cgaccaatgg gtgaatcttg aaaacaggta
     5521 atgtccgccg tcaatttccc gaacggtgca acgcggtgtc caatatcggt gctgattggc
     5581 aggcataaaa attttatcgc ccgatccgac caaggcattt gtccagcgaa tcaaatctgc
     5641 gcgcctatct tgcccgatca tcgcaaaaag tgcgataagt tcttgatgaa tttcgtcaaa
     5701 cggacgggcg ggaaattgtt ggtaatcttc aaaagatgct ttatcgccac acattctgcg
     5761 ttcaaatttt aaacgggtgt tttccgtgag gttctccaat gtgcctttaa aaacggcgca
     5821 agggataccg aaattatcat cgcaaggcaa acctgtgcca ttcactgccg ttgcggattt
     5881 taatcttatt ccttgcaatg ccctctctgc cgcccaaacg cccattgacc acgccaccaa
     5941 acggatgtgc cgataggcgg aaaaatcaaa atccaaattt aaatcttgat aatcatagca
     6001 aatcaataaa tcgtgatttt ccggcaaaat caaatgattt acagcatcgg gcggcgttcc
     6061 ccaacctgca aaatacagga ttaaatgttc gccttgatga ttgtaaaatt ttgttttcat
     6121 atcatatcct tacaggcacg ccgcaaactg ccgcacttca tccattgtca tatctgccgt
     6181 caaagacaat cgtattctgg atgtaccttt tggtactgtc ggtggtctga tgggcaggca
     6241 ataataaccc tgcctttgca ggtattccgc tttggcaagg gtggcttcat tcccgcctaa
     6301 aatatagggg acgatacagg tttggctcgg cattatttgc gtccgatgcg ccacttcccg
     6361 ccgtaaaaat gcgcttaact gctcaagatg gcttctttct tttgagaatt gcggcaatcg
     6421 ttcaaaaata aaataagtcc aagccacatt aaacggcggc aatgcggttg aaaaaatcaa
     6481 tgggcgcatt tgattaatca aacattcttt caatacttgg ttgcagacgg catacgcccc
     6541 caccgaggct aaggctttac cgaaagtgcc gaccaataaa tcaatctcgg caatcaaatt
     6601 atcccgttcg gcaatcccca atccgttttg cccataaaca ccgattgcgt gggcttcatc
     6661 cacataaaga taagtattgg gaaactgttt ttttaattgg acaagctgtt tcaaatccgc
     6721 cacatcgccg tccatactga aaacagattc ggtaacgata aaagtgcggt caaattttcc
     6781 gacgtttttt tcaagcagat ttttcaaatg ttcataatca ttatgacgat aacgggaaaa
     6841 cgcacaccgg ctcaaacgga tgccgtcaat catactggcg tgaacaaatt tatctgccaa
     6901 aatcaaactt ttcgtcgtcg tcaaagcagg caaaataccg agattggcgt gatagccgct
     6961 gttgaacaat aacgcgcttt cccgttggaa acgttgtgcg acaagctctt ccaaatcggt
     7021 ataaatagga aagttgcccg ttaataaacg cgatgaagaa ctggtaaaag agggaaaatt
     7081 accgccgtat tgctgcaaaa aagaccggcg caagttttca tctgatgcca aacccaaata
     7141 atcattagac gacatattca gcattttgca gttttcccgc gtaatatacc gcccttgatg
     7201 aatcaaatcc ggaatcgaac gatattggtt ttgcgcgccg agttgttcaa gctgttgttt
     7261 aaaaaccttc attatgatgt aaatattcct gagttaaagc ctgaaccaac ccagcatcaa
     7321 acaatcaagt aatgcccttt taataaaaac cgttttgccg ccgacctttg ccacacccct
     7381 gccttcataa tccaaggcgg aaatttccgc gacatttgtt tccgttgcca ttacccaatc
     7441 cgtccgcact gtaccgaagc gcatattttc gcacaaattg gtacggtttc aggtatgatt
     7501 tgccgaaaac ctatcggaca cacaccatat tttgatatga ataaaacaat ctgccgcact
     7561 gccgcactat tgataagcgg tttttcatac gcaaacaccg tcattcccga tgtctccccc
     7621 gtcgcacaag gtcaacatgt cttcattaac atccctcagc aacgcctgtt cctctacacc
     7681 gacggcaaac tgaccaaggt ttatcccgtt gcagtaggtc gggcgatgac gcaaaccaat
     7741 ctaggcgaac ataaaatcgg tgcgaaagcc tataaccctg tttggtacat ccccaaatcc
     7801 atacagaaag aacgcggcga cggcgtaaaa accatagccg ccggcccgga caaccctttg
     7861 gggccggttt ttgtccgctt aggcgacccc aaactcggtt tgggcataca cgggaccaat
     7921 gcgccggcca gcgtccccgg ggttcggagt cacggctgcg tccgcatgaa atcgcccgac
     7981 gcgctcgagt ttgccaaaac catcgccagc ggctcgcccg cctccgtcat ctatcaaatg
     8041 gcggggctca atgaagatgc ggatcgcaac ctgtggcttg ccgccttccg cgacccttac
     8101 ggtaagaaca accttgacat cgcctctctg aaaaaaagta ttgcgcaatg ggcaaaaaca
     8161 cagggtaaaa ccatcgcgcc cgagaaagtc gatgctgtac tcaaagaccg caccggatcg
     8221 gccgtctgcc tgacctgcgg caaaaacggc aagatgaaga tgccgctcaa atcgctggcg
     8281 tggatacagg gttcttcctc atacagccaa gctgaagtca ttgaacaaac tgaggaaacc
     8341 aactctgccg aaatatccga gacacgcacg cccgaagtgc ctgatgtaca cacgcccgag
     8401 gcacaaccgc atttaaatac ccaatccgac ggcacgccga ctgcctatac cgaaccggct
     8461 gccgattcat cgccgcaagt agaaacacct gatcaggctg cttccgagcc ggttgatgta
     8521 ttattttcaa tagatgtgat acggcaggga aatttgcgtt taggtaattg aataaccttc
     8581 tgattattta atgcttatgt ttatcagaag ttgataggcg gtttggtttt tgtttggctt
     8641 ttcctacacc gccgcctgcc gctttctgca acattcaagc gcacaaatat gccatctgaa
     8701 ggctttagac ggcatatttc acgataatag tcgcccaatc aaataaacac agattggaaa
     8761 tttattttat ttttccctta ccaatacccc agaactttcc accaaatgct gccgataacg
     8821 aaaaaaatca gaaaattgac cacgctcatg ataaaacccg ccttccacca ttctcccatt
     8881 gtggtgtagc ccgaaccgaa aatcacaggc gaagtaccgg tcgcataatg agtgagggtc
     8941 atcataatgt tggatgcggc cgccatcatc agcgcggtcg gcatcgccgg ggcattcagt
     9001 gaaacggcag cagcgaaaaa tgcgccgaac atagcggtaa tatgtgcagt agtactggca
     9061 aacatataat gcgcatacat ataagcaagc acgaggatta cgcccgcagc cgtgccgcta
     9121 acgcccaaac cgccgacact ttccgccaac actccggaga accatttaat cagtccgagt
     9181 ttatttaaaa atgcggccat cataatcaat gcgccaaacc aaataatcgt atcccacgcg
     9241 cttttttctt tcaaaacatc gtcccaagtc aatacaccgg aaagcaaaag caggcttaat
     9301 ccgataaatg cggtggcggt ggcgttgata ctaaaagcgt gattgccggt aataagggcg
     9361 ggaacatctg cccacaacag caacaagata ccgaaaatga ccgccataat gatttcgtct
     9421 gccgacattt tacccatctc cctcagacgg tctttggcaa attgaacggc attgggcgtt
     9481 tctttaattt caggcggata caaaaaatat aaaatcaaag gcataacgaa aaaggcgata
     9541 acgccgggaa cagccattgc ccacgcccac gccccccaag aaagacggaa actactgcct
     9601 aaattttcgg caatcaagtt gacgattaaa gggttggggg cagttgcagt aataaacata
     9661 gccgacgaaa tgggattgga atgatagttg accaaagcca aatatttacc catcttgcct
     9721 tctgtgcctt ttgcgggatt ggagccgtaa ctgccggcaa tcgactgcat aatcggatgt
     9781 ataatgccgc cgccgcgcgc ggtattggaa ggggtaacgg gagccagcag cagttcggaa
     9841 agagcgagac tgtaaccgat gcccagcgtt tttcttccaa aaacggcgat aaacaaatat
     9901 ccgatacgca tccccagccc tgttttgagc aaaccgcgcg aaatcataac tgcgatggca
     9961 atcagccaaa tcaacggatt ggcgaacgca ctcaacgcat cgctcatcgc cgcacccggt
    10021 ttgtcggcgg ttacgccggt tactgcgacc aacccgacgg caataatcga cagcgcaccc
    10081 aacggcatgg ccttgccgat aatggcggca atcacaccga taaacatggc cagcagcgtc
    10141 caagcctgag gcttgacccc gtcgggtacg ggcagtgcca aaaccaaggc gcacaatact
    10201 gcggcaatgg cgaggggtat cggtttgaaa cccaatttca tcatattgac ctccgtaaaa
    10261 aagaccgtcc cgaaaaatcg gaaaaataat atttaactaa ttgttttata agatatattc
    10321 cgatatttca ccgtctttcc gatatgcggc tccgggcaac ttttgtttca gtatttgaat
    10381 tttcattaga ctgaatacgc cgtttgaacg gcacggcgaa aacccggggg atgccggacg
    10441 ttcagtcctt tttcgcacct tgaaggtaaa gcatttccaa ggcaattgtg gcaccggcca
    10501 aagcggtaat gtcggattgg tcgtaagagg gggcaacttc tacaacatcc ataccgacga
    10561 tgtcgagatc cgtcagccca cgtaggattt ttaatgccct gtcgctgctc aagccgccgc
    10621 atacgggcgt accggtccca ggggcgaacg acgggtccag gcagtcgatg tcgaaagtca
    10681 ggtaaacggg catattgccg acggtttctt tgattttacg gacggtctct tcaacactgt
    10741 cttcattgac ttggggggcg gtcaacacag taaaaggcaa ttttttactg tgttcggtac
    10801 gtatgccgat ttgcacggaa tgtgccggat cgatgatgcc ttccttgggg gcggtataaa
    10861 acatcgtacc gtggtcgtat tcgctgccgt tgtcgtaggt gtcggtgtgc gcgtcaaaat
    10921 gaatcagtgc gagtttgccg aaatagcggg cgtgggcgcg caacaacggt agggtaatga
    10981 aatggtcgcc gcccaaactc aaacagcgtt tgccggaaga aagtaatttg ccggcgtgcg
    11041 cttccatttt ttcgacaaaa tccctgctgt cgccaaaaga aaaaaccaag tcgccgcaat
    11101 caataatgtt caggcgttcg cgcacatcaa atgtccatgg aaacctgcgg tgctcccaag
    11161 cgaggttgac ggaggcgcgc cggatggctt caggaccgaa acgcgcgccg gaacgccctg
    11221 aaaccgccat atcataaggc acgccggtaa taacccaatc ggcatgactt tcatacggca
    11281 taaaattaag cggcaggcgc aaaaacccga aattattgga aacgagggag ttgtcggttt
    11341 gtcctgccag tgtgctgtat tgcatcgtaa tgattccttg taattggttt caatcggtcg
    11401 tgatgattgg tgtttgagta agaaaatcgg gcttcagacg acatatccga tgccttgatg
    11461 cgtctattcg tcttccaaat aggtataacc attaagcccc gcttcgagtt cttttaagaa
    11521 agacatagcc tgcgaggcag gaaggtctga atgttcgatt tgttcgcgat agcgtttcat
    11581 cagctctttc ggatcttgat aaacgtattc gagcatatcg gcaacggtgt ttccttcatc
    11641 gtaatcgatg acggtaaatt gtccgtcttc ccctacaaca acatcggcag tggcagtgtc
    11701 gccgaaaaga ttgtgcatat tgccgagtat ttcctgatat gctcccacca taaaaaagcc
    11761 taaaagcggc ggctcttctt cgggataatc aggcataggc atcgtaccgg cgatgccgtc
    11821 gccgtcgatg tagtggtcaa tcgtaccgtc tgaatcgcag gtaatgtcca acaacacggc
    11881 gcggcgcgca atcggttcat tcaaaccggt aatgggacaa acagggaaaa gttgatctat
    11941 gccccaagca tcgggcaaag attggaagag tgagaaattg acatacagct tatcggcaaa
    12001 acgttcttgc aattcgtcaa taatggttcg gtgagaccgg tgtttttcat taaacaattc
    12061 gccgacttca tgacagatat ttaaatacag ttgctccgcc cacgcacgtt gcgccaaact
    12121 caacagcccg acattatact gattatgcac atcggcaaga tcaaactgcc cttcgtgtat
    12181 ccagctgcgt aaggaacgtt tttcccgcga ggcggaaata tccgtccaag tttcccacat
    12241 actgtgcaac acacgcggtg cttcgggcga tggcgcatcc agccggcgcg gtttgtaacg
    12301 ttcaacgcct ataacattag caaccaaaac ggcgtgatgt gcggtaatgc cgcgcccgct
    12361 ctcggtaatg attgtcggat gcggcagccc gtgttcgaga caagcctggc tgatgcccca
    12421 tacgactgtg gcggcatatt cgttgaggct gtaattaacg gaacaatccg attgtgtgcg
    12481 gtttccttcg taatccacgc caagcccgcc gcctacatca aaacagcgga tatttacccc
    12541 cagtttgtgc aactcaacat aaaaccgagc cgattcgtgt acacctgtgg caacatcacg
    12601 gatgttccca agctgcgagc ccaaatggaa atgcaaaagc tgcaggcaat ccagcctgtt
    12661 tttttgtttc aaaatatcga ccagttgcaa aacttgggaa gccgacaagc cgaattttga
    12721 tttttcccca cccgaagact gccattttcc cgaaccttgg gaagccagtc tggcgcgcac
    12781 acccaaacgg ggcttgatgc cgagtttttc cgcctcttcc aataccattt gtatttcgga
    12841 cagcttctca atcaccaaat aaacctgatg ccccagtttt tcgcccatca aggcgaaacg
    12901 gatatattca cggtctttat agccgttgca gacgattaat gtttgccggg tgccggcgtg
    12961 tgccaaaacc gccatcagtt cggctttaga accagcttcc aaaccatgcg gttgtccgct
    13021 tgacataagc gattcgatga cgcggcggtg ttggttgacc ttgatagggt aaaccaaaca
    13081 ataaccgccc ttatagccgc actcttcccg tgccgtctga aaggcgcggt tgatgtcgcg
    13141 gaggcggtgt tcgaggattt gcggaaaaca aaacaaaaca ggcaggcgcg cctgatgttt
    13201 ttgttgcacg gcttcagtca gtttttgcag tgaaacagtt tgattgtgtt gcgagggatt
    13261 ggggcggacg atgatttcgc cggaatcgtc aacatcataa taacctatac cccaatgatt
    13321 aatgttgcac acttcacgga tggtaaggat aggcataata aacctgctcc gtctgtcgtg
    13381 ttgaaaagga atgattataa caaatcagcg tgaaatgtca tttttttaat aagaaaagcc
    13441 tgcctcatac ctgatgagga acaggcaaaa tgccgtctga acgcttcaga cggcattttg
    13501 gttcagcttg ccatcaaagg agtcagcgat cgagctgctc tttgatgatt ttcaggtcgg
    13561 ggtaagacaa cacgatgtcg tattcgcggc cgtctttata ggcttccact tccagcacag
    13621 gcttacccca atggtcgtcg gcatcgacat cgtgaacctg ataaccacgc tgttccaaca
    13681 ttttcacggc ttttgtgcgg ttttgttcaa aatggggatc gccgtaaatc tgacgctcgg
    13741 cagaatcgcc ggcaaatgcg gttgcggcac tcagggaaac aacggcggcc aataacagtt
    13801 ttttcatttt cagtcctttt tttatcggtt gattgaacaa gatgtgtttt tcaataccgc
    13861 cattaaaaca cagcaaaatt aggtttgaat tagagggaag tcaagaagcg taaatgccgt
    13921 ctaaaaaaaa cagagccgtc aaacggctct gttttcctta tgcttctttg gtttcagccg
    13981 ccttttgacg caggcgcaag ctcaattcgc gcaactgctt gtcgtccacg ctgttgggcg
    14041 cgttggtcag caggcattga gcacgttgtg ttttcgggaa ggcaatcacg tcgcggatgg
    14101 attcggctcc ggtcatcagc gttaccagac ggtcgaggcc gaatgcaagg ccgccgtgag
    14161 gaggcgcacc gaatttcagg ttgtccaaga ggaagccgaa tttctcttgt tgctcttcag
    14221 ggctgatttt cagcgcggca aacactttct cttgcacgtc tgcgcggtgg atacggatag
    14281 agccgccgcc gatttcccag ccgttcaata ccatatcgta ggcgcgtgcc aaacaatttg
    14341 ccgggtcgga aaccatcagg tcttcatgac cttcttttgg cgcagtaaac ggatggtgta
    14401 cggcaacgta gcggtcggct tcttcgtcgt attcgaacat tgggaagtcg acaacccaca
    14461 aaggtttcca ttcgtctgtg aaatagccgt tttccgcgcc gtgttccaag ccgactttga
    14521 tacgcaatgc gccgatggct tcgtttacga ctttggtttt gtctgcaccg aagaagataa
    14581 tatcgccgtt ttgtgcgccg gtacgcgcga tgatttcctt cagggcattc tcagacagga
    14641 attttacgat tggagattgc aggccgctgt cttcgccgtt ggagaggttg cccacatcat
    14701 ttactttgat gtatgccaga cctttcgcac cgtagatgcc gacaaatttg gtgtattcgt
    14761 cgatttcttt gcggctgaat ttcgcgccgt tcggtacacg cagagcgact acgcggccgc
    14821 ctttcatatc tgccgcgcca cggaagactt tgaattcttc cgttttcatc aggtcggtca
    14881 actcggtgaa tttcaagttg atacgcatgt ccggtttgtc agagccgtag tagaacatgg
    14941 cttcagagta aggcatgcgt gggaagtcgc ccaagtccac gcccagcgcg tctttgaaga
    15001 cttgtttcgc cataccttcg gtgatgtcca tgatttcatc ctcgtttaag aacgaggttt
    15061 ccaagtcgat ttgggtaaat tcaggctgac ggtcggcacg caggtcttcg tcgcggaagc
    15121 acttggtgat ttggtagtaa cggtcgaaac ccgccaccat caacagttgt ttgaataatt
    15181 gcggcgattg cggtagcgcg aaaaactcgc ccggatgaac gcggctcggc acgaggtagt
    15241 cgcgcgcgcc ttcaggcgtg gagcgggtca gcatcggggt ttcaatgtcg atgaaacctt
    15301 gcgcgtccaa gtagcggcga acgcccatag ccacttggta acgcaggcgc aggttgcgct
    15361 gcatcaccgg acggcgcagg tcgataacgc ggttggtcag gcgaacgttt tcgctgatgt
    15421 tttcatcgtc gatttggaac ggaggcgtag cggcggcgtt taatacttcg atttctttgg
    15481 caagaatttc gattttgccg gaaatcattt tgtcgttggt tgtaccttcg ggacggttgc
    15541 gtacgcggcc ggtaatgctc aaaacgtatt cgttgcgggc ggaatcggca gcagcaaacg
    15601 cttccggagt gtcggggtca atcacgactt ggacgatgcc ttcgcggtcg cgcaggtcga
    15661 taaaaatcac accgccgtgg tcgcgtcggc ggtgtaccca gcctttgacg gttacggttt
    15721 ggtctaagta ttgctcgctg atcaggccgc aatagttggt acgcataaat tcacctttta
    15781 ttgatttaaa ctgaaaacag aaaatgccgt ctgaacggcg gctttattgt tgttcgggca
    15841 aatccgcctt ttcagacggc ataggtcctg ccaatgtttt gacgggcagg tcgtcaggga
    15901 tgaccatacc cagcgaaatc acatatttca atgcttcgtc cacgctcata tcgagttcgc
    15961 gcacatcgct tttctttacc ataatatagt aaccgccggt cggattcggc gtggtcggaa
    16021 catacacgga aagataatcg ccgtccttcg gcaatgcggc cttaaccgca ttcgacacct
    16081 gaccggacac gaatgcgatt gtccaaatac ccgattgggg aaacggcacg agtactggtg
    16141 ttttaaacga acggctgctg tcggacagca gcgattcgga tacttttttc acactcgaat
    16201 agatggactt cacaactgga atccgcccca acaggctgtc ccacgcggca agaatctgcc
    16261 ggcccaatac gtttgcggca aacaatccgg ttacaaacaa tacagcaatg gcaacgataa
    16321 cgcccagccc cgggatattg aagcccaaaa catattgcgg ccgccattgc ttcggcagca
    16381 ggttgacgag ctgatcggac gcggaaacga tataggaaac cacccaaacc gttaccgcaa
    16441 tcggcagcca gaccaaaatg cccgtaatca gatatttttt taacgccttg gcagctttac
    16501 cgccttcggc ctcaggttcc gtcatcttgc ttgattccga caaagtccgt acaaaccgca
    16561 cattatacgc gtttgcccgg attcaaacga aatttttatc ccgccccgcc aaaccgccag
    16621 cggcttcaga cggcacggca acttgatata ccgtctgaac acgcggttca gatgccgtcc
    16681 aagtcgttga acatcaaccc gataccgata ccgttctgct tgtggttgta gtcgatcagg
    16741 ctctcgccgt aaccgtggaa tccgcgtacc acgcctttga gtttgccctt aatcggaaac
    16801 gtgtaggcgg cttcaatcgc gccgtagccc gttttggggt tgtagcgcaa tacggaatac
    16861 acattctgcc tgtcgttcag gcggtactgc agcttcacgt cgccataccc catatagtcg
    16921 gcaatatcgg gattgtcgtt tttatcgccg ctctgatcga acgcacgcac ccacacgcgc
    16981 ggaatcaccg tcaatttgcc ccattccatg cctgccatgg cgtaaatcct gttccacgaa
    17041 cgcgattcgg gacggctctg tccgttggac tggtggacaa aacccgcacc gagcatacgc
    17101 agcctgccgc cgaacggcaa atccgccttc acaggctggg tcaggaaaat ttcaggtttg
    17161 taatccgtat tgcggaacgg cgcggatttc ctgccttggt tgtaaatctg ccaatcggat
    17221 ctttgggtgt agccgaacca cagatccgcg cgggttttaa acaaatcttc ggcaattttg
    17281 cttttgaacg aaacctgcaa tttggtttcc gcacgtttct gctgtccgaa tttttcctgt
    17341 acagtcgtac cgcgcgtcgg cgaacccggg gcatagttgg gcgaattgtt gtaccagagc
    17401 ggcataaggt acatcggatt gtgttcgcgt acgcccaaca gcccgcgcaa atcgtttttg
    17461 tccaagtcgt acatcaggct caaaggcgta tagatgtcgg cggtttcgcc cgcactgtcg
    17521 gcaggaagcg catccccgcc tttttcaaca acaatgaccg cctcgccctt atccaggctg
    17581 ctgcggacgg tttccgtcag attgagtacg gctttcgact cctgcccttc ctgccctgcc
    17641 gaagacggaa gctgtgccgc aaaaatcctg tcgtaacacg ccaaacgcgt aacattgtcc
    17701 gtcaaagcgg cgcattgcag cgcggtctct ccaaaagcgg ataccgtcgg caacagtcct
    17761 gtcaaaagaa tatagcgcat attccgtgta ttcatctccg cccccattgt cggcatattg
    17821 gttttcaaac ggcattttat agcggattcg gataaaaacc gcaccctttc cgccatttcg
    17881 ggattttgcc cccgcaatac agaaaacccc gaaaccgtcg ggcttcaggg ttttccgctt
    17941 atcgcgtatc aaccgccttg gcggttttgc aaaaatcaag ccagtgcttt tacttttgca
    18001 gacagacggc ttttgtggcg tgccgctttg tttttgtgga acacgccctt gtcggcgatg
    18061 cggtcgatga ctttgacgga ctcttggtaa accgcttgtg cggcagcttt atcgcctgct
    18121 tcgactgctt tcaatacttt tttcactgca gtgcggaatg cggtacgcag gctagcgttg
    18181 tgggcgcgtt gtttgacgga ctggcgggca cgtttgcgtg cttgtgcgct gtttgccata
    18241 ttggaatctc ctgaaagaaa aataaattct gtaaacgcgc aattttaaag ggggtttaca
    18301 ttatatgcaa gccttttctc tctatccgcc cgtcggacac cctgacagcg caaaaaaacg
    18361 gcaaaatcgt gcggacgttt tctccctctt ttgaaaacaa ggtaattttt taggaaaatc
    18421 aggtcaatat cgctttgagt ttgcacaaat ttactttaca atgcccaaac cttgcgccgg
    18481 ggtgtttatg gggcgcgggg ttttcttttt tttccaacct ctttcatcag gaatctgccc
    18541 gtatgaaaaa atccgtatta gccgttttgg ccgcgctgtc tttggcagcc tgcggcggca
    18601 gcgaaaaaaa cgccgtgcaa cctcaagcag acgctgcgtc tgctgccaat gccgaagccg
    18661 ctgccaccga tactctgaac atctacaact ggtcgaacta tgttgacgag agtacggtcg
    18721 aagactttaa aaaagccaat aatctgaagc tgacttacga cttgtacgaa aacaatgaaa
    18781 cgctggaagc caaaatgctg accggcaaat ccggttacga tttggttgtg ccgggcatcg
    18841 ccttcctacc gcgccaaatc gaggcgggcg cgtatcaaaa agtcaacaaa gacctgattc
    18901 ccaactataa aaacatcgat cccgaactct tgaaaatgct ggaaaccgcc gacccgggca
    18961 accagtatgc cgtcccctat ttctccggcg tgaacacgat tgcgattacg gcgaaaggca
    19021 aagagctttt gggcggcaag ctgcccgaaa acggctggga tttgctgttc aaacccgaat
    19081 acacccacaa gctgaaatcc tgcggcatcg ccctgtggga caccccgagc gaaatgttcc
    19141 cgattttgct gaactacttg ggcaaagacc ccaaaggctc gaatcctgaa gatttgaagg
    19201 cggcggcgga agtgttgaag tctatccgtc cggatgtcaa acgtttcagc ccgtccatca
    19261 tcgacgagct ggcgcgcggc gacatctgcc tggcggcagg caacggcggc gatttgaact
    19321 tggcgaaagc acgttccgaa gaagtgaaaa acaacgtcgg catcgaagtg ttgaatccga
    19381 aaggcatggg cttctggatt gaatcttggc tgattccggc cgatgcgaaa aacgtcgcca
    19441 atgcccacaa atacatcaac tacacgctcg accccgaaat cgcggcgaaa aacggcatcg
    19501 ccgtaacctt cgcccccgcc agcaaaccgg cgcgcgaaaa aatgcctgcc gaactggtaa
    19561 acacccgttc catcttcccg aacgagcagg atatgaaaga cggttttgtg atgccgcaaa
    19621 tgagtacgga tgcgaaaaaa ctgtctgtca gcctgtggca gaaaatcaaa gtcggcacca
    19681 actgatttga agcattaaaa atgccgtccg aacatcgttc ggacggcatt ttatattgga
    19741 ttgaaataga aatatttata tagtggatta acaaaaatca ggacaaggcg acaaagccgc
    19801 agacagtaca aatagtacg
//
LOCUS       DAWKOX010000018        19085 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.018, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000018 DAWKOX010000000
VERSION     DAWKOX010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19085
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.018"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            83..1267
                     /gene="coaBC"
                     /locus_tag="WJK78_000456"
     CDS             83..1267
                     /gene="coaBC"
                     /locus_tag="WJK78_000456"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ7597424.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAGYL
                     NK"
     gene            complement(1334..3490)
                     /locus_tag="WJK78_000457"
     CDS             complement(1334..3490)
                     /locus_tag="WJK78_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ7597425.1"
                     /translation="MPVPQPTAPYDPLTAEARALLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTVAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGENLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGKHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3583..3789)
                     /locus_tag="WJK78_000458"
     CDS             complement(3583..3789)
                     /locus_tag="WJK78_000458"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ7597426.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3848..4465)
                     /gene="gmk"
                     /locus_tag="WJK78_000459"
     CDS             complement(3848..4465)
                     /gene="gmk"
                     /locus_tag="WJK78_000459"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ7597427.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4593..5192
                     /locus_tag="WJK78_000460"
     CDS             4593..5192
                     /locus_tag="WJK78_000460"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ7597428.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKD
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5238..6026)
                     /locus_tag="WJK78_000461"
     CDS             complement(5238..6026)
                     /locus_tag="WJK78_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ7597429.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPP
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVGALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPSVDEDGVLRGLQDLGVI"
     gene            6351..7706
                     /gene="yegQ"
                     /locus_tag="WJK78_000462"
     CDS             6351..7706
                     /gene="yegQ"
                     /locus_tag="WJK78_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ7597430.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRSIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLTGHSIAKQSQYVGHVTEIDAEGWATVEVKNR
                     FAIGDSLEIIHPSGNQTIKLEQMARKGQPVDVAPGNGIQVKIPNMRGKEKALIARVLN
                     P"
     gene            7840..8316
                     /locus_tag="WJK78_000463"
     CDS             7840..8316
                     /locus_tag="WJK78_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ7597431.1"
                     /translation="MLAACQSGSAPKNAHTASPGTPAGESCKVIRGDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGIGKSDSEAYERA
                     LINAARKFQQTAGKLGGRGVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
     gene            complement(8646..8843)
                     /locus_tag="WJK78_000464"
                     /pseudo
     CDS             complement(8646..8843)
                     /locus_tag="WJK78_000464"
                     /inference="COORDINATES: protein motif:HMM:NF013466.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            complement(8847..9455)
                     /locus_tag="WJK78_000465"
     CDS             complement(8847..9455)
                     /locus_tag="WJK78_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7597432.1"
                     /translation="MSNSSFKLSALAIACGLALSACSSGGGDAPSVKPTPTVPGASNP
                     APANPEPSAPAASPLKTGELGEKYFYGEGEITKLVINGETINLTVADEQLSRRVKLWT
                     DFDKIITSQGFENLIYGAAKLADGSYALFVQGKLSDSLPGDTVTYSGDVLHFRSRNLT
                     EGNWFNEGNSFRAAGSFTATVNFAGKSLNGKINSGDGLYMGT"
     gene            complement(9649..10278)
                     /locus_tag="WJK78_000466"
     CDS             complement(9649..10278)
                     /locus_tag="WJK78_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ7597433.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            10616..12076
                     /locus_tag="WJK78_000467"
     CDS             10616..12076
                     /locus_tag="WJK78_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ7597434.1"
                     /translation="MGSAVGGQPLEKIFLPDTKGLFILPNLPVLHPDWVYRFFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPRLDRGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKRVYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGPAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTVTEDKICCSRCLYFRDKDEQPCGVCGADLYRRRPKSLSISLAFLVAAFILYFPT
                     NILPIMISSNPTALEINTIFNGIVYMWDDGDRLIAVIIFSASIMVPVLKIIAMAVLIY
                     SAYFKPVMSADKMSVLYRITESIGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
     gene            12069..13730
                     /gene="pqiB"
                     /locus_tag="WJK78_000468"
     CDS             12069..13730
                     /gene="pqiB"
                     /locus_tag="WJK78_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ7597435.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFDKLPLDKTVAELN
                     GSLTELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            13730..14248
                     /locus_tag="WJK78_000469"
     CDS             13730..14248
                     /locus_tag="WJK78_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ7597436.1"
                     /translation="MRLFPIAAALTLAACGTMQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSARIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGMNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            14252..14803
                     /locus_tag="WJK78_000470"
     CDS             14252..14803
                     /locus_tag="WJK78_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ7597437.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLNWTLMLKKQQAFQTAFEGFDINTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRKTLKYHPKWLDAV"
     gene            14793..15434
                     /locus_tag="WJK78_000471"
     CDS             14793..15434
                     /locus_tag="WJK78_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ7597438.1"
                     /translation="MPSEKPMNRRIFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVLV
                     GIGGNDFLRKVPEEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(15427..15657)
                     /locus_tag="WJK78_000472"
     CDS             complement(15427..15657)
                     /locus_tag="WJK78_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ7597439.1"
                     /translation="MISACPGFIHSRLGRSVMPSEPAGRLFQKTPYRCNFMRLYGVGF
                     ALQTAYASRSSLVSQSVHDYINNLGADKPLFI"
     gene            15605..15964
                     /locus_tag="WJK78_000473"
     CDS             15605..15964
                     /locus_tag="WJK78_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597440.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNIVFPLPAHPLAWLVPAGFMVLGGGFPLSLPLVALLVLTCCILAHCPPLS
                     RLLCYPCPNHPMSKNSA"
     gene            15995..18847
                     /gene="gcvP"
                     /locus_tag="WJK78_000474"
     CDS             15995..18847
                     /gene="gcvP"
                     /locus_tag="WJK78_000474"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ7597441.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNMINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDERVYPQTLDVMKTRAKYFGFELVVGDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVSADIMSLVLLKPPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTIDFGSK
                     EKADQVFAAALASGYNLRRVNDTQVAAAFHETSAYEDLVDLYRAFTGKDTFTFADDVK
                     GRLNAELLRQDDILQHPVFNSYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFTDIHPYAPEAQTAGYRELLADMENSLKAITGFDAISLQPNSGAQGE
                     YTGMLAIRRYQESQGEAHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHTLTDTHNAAADQT
                     AVAAAAYGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKALGEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKDDNPLVNAPHTAADITGNWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
BASE COUNT         4692 a         5264 c         4651 g         4478 t
ORIGIN      
        1 ttgtatccaa acggtatcta atgtatccac actttgttat agaatggctg ctgttttttc
       61 ttcgtaatta gaaattgtca aaatgggcaa acatattctt ttaggtgtaa cgggcagtat
      121 tgcggcgtat aagtcttgcg agttggttcg tctgctgaaa aaacaggggc attcggttac
      181 ggtggttatg agccgctcgg caactgaatt tgtttctccg ctgacttttc aggctttaag
      241 cggcaatcct gtcctgaccg acacgcacgg cggcaacggt tcaaacggta tggaacatat
      301 caacctgacc cggaatgcgg atgtttttct gattgcgccg gcaagtatga ataccgtggc
      361 aaaaatctgt aacggcgtgg cagataacct actgaccagt ctggcagccg cacggaaatg
      421 tccgcttgcc atcgctcccg cgatgaatgt ggaaatgtgg ctcaaccctg ccaaccaacg
      481 gaatatcgca caactggttt cagacggcat tactgtctat atgccgggct tgggcgaaca
      541 ggcttgcgga gaaaatggca tgggaaggat gccggaacct gccgaattgc tggatttgct
      601 tccggacttg tggacaccga aaattttaag gggcaagaaa atcttgatta ccgcaggtgc
      661 gacatttgaa gccattgacc ctgtcagggg catcacaaat acctccagcg gaaaaatggg
      721 ggtagctttg gcgcgggcgt gccgtgccgc cggtgcggaa gtcagcctga ttcacggaca
      781 gcttcaaacc gcgctgcctt tcggcatatc cgatacggtt caagccgtca gcgctgaaga
      841 tatgcatcgc gcagtgcatc gtttgattga aaaacaagat gcttttattt ctgttgccgc
      901 cgtctcagac tataaggtta aaaacaagag tacgcaaaaa ttcaaaaaag ataaaaatgc
      961 caaaccgtta tccatcgaat tggatgagaa ccccgatatt ttggcttcta ttgcctcatt
     1021 gccgaacccg ccgttctgca tcggttttgc cgctgaaacg gagaatgtaa tggcatatgc
     1081 acgagaaaaa cgtattaaga aaaaaatacc ggtgatagtt gccaatgatg tttcaatcgc
     1141 gatgggcaaa ccgaccaacc ggattaccat tatcggggac gacggggaac tatcttttcc
     1201 cgaaacaagt aaagatgaag cggcgatgca gattgttgaa aggcttgccg gatatttgaa
     1261 caaataagca attgaacgga taaaccataa agcgggttgc ctgttaatca aaaggcaacc
     1321 cgttttacct gcttcaactt ctgatgactt tgcggatata tggaatacta tgcagatttt
     1381 gaataatctg attcaattga ttcagattct tgactttcaa taagaatttg aattcgacaa
     1441 aaccttccgt tcccgactgg gatttagacg gtgtttcgac cgactcaatg tccgcaccgg
     1501 aatcggaaat cgcttgcgcc attaatgcca acaggccgtg gctgtcttcc gattggactt
     1561 gaagcccgac acggtagttc tgcccgttca tattttccca gtctgcatcc agctgctgtt
     1621 cgggatcgga cttcaacaac gtcgggcagg tatctctgtg gataatcatg ccttttccct
     1681 taaccaacag caaacggatg gaatcgccgg gaacagggtg gcagcactct gcaaaatgaa
     1741 tatgcccgct ttcctgccca tcgactttaa tggaactgag cctgacctca ctaccgaaat
     1801 gctttcctgc caattcggca atatgcatag cgacataaac aggcagggta tgccccatac
     1861 cgacgttgta cagcacttcc tcaaatgaag tctgtttatc gttgagatcg gcaaggtatt
     1921 tttctttgat gccgtctgaa agcaggacat ctttgggcag caaactggac agggcttttt
     1981 gtaagaggtt ctctcccaaa acgaccgcat cgtgccggtt aaggttttta atatattggc
     2041 gtatggcact gcgcgccctg cctgacacgg cgaaattcaa ccacgcggga ttgggtttgg
     2101 cgtgttcgga tgtaataatt tcgacggaat caccggtttt gagcttcgta cgcaacggca
     2161 tcatgatatt gttgatacgt gcggcaacgg ttttgtgccc gatatcggta tgcaccgcat
     2221 aagcaaaatc gacaggcgtt gcccctttgg gcaaagttag gatttttcct tttggcgtaa
     2281 ggatgtagat ttcgttcgga aacaaatcga ctttgacgtg ttcgagaaac tcaatggcat
     2341 tggcactgct tgcctgcaaa tctaagatat ttttcagcca ccggtttgtg tgaagcaccg
     2401 cctgatcgac cgtcttagaa tatgatttat agctccaatg tccggcgatt ccaccttcgg
     2461 caacagcatc catttccttg gtacgtatct gaacttcaat cggcaagccg taaggaccga
     2521 ccaaagtcgt atgcagactt tgatacccgt tgcttttcgg aatggcgata tagtctttga
     2581 accgcccggg cttgggctga tagagggtgt gcaatgcgcc gagtgcggca taacaggctg
     2641 gaatgctgtt gacaatgacg cggaaaccgt aaatatccat aacctcggca aagcgcagct
     2701 ttttcgccat cattttctga tggatgccgt acaggttttt ttccctgcct ttgattttgg
     2761 cctctatatt cgcgcctacc agccgctggc cgaatgcgcg caagactttg ccgacaacgt
     2821 cctgccggtt cttccggctc ttgtccatcg ctttttttaa agtctcgtag cggttgggat
     2881 gcaggttttg gaacgataaa tcctgaagct cttgatatgc gttattcaaa cctatgcggt
     2941 tggcaatctg tgcatagatt tcaagggttt cccttgcaat ccggcggcgt ttgtccgggc
     3001 gcatcgaacc gagtgtccgc atattatgca gacggtcggc aagtttgacg acgatgacgc
     3061 gtacatcttt ggtcattgcc aaaatcagtt tgcggaaact ctccgcctga tgctctgcat
     3121 gatcttcaaa tttgagtttt tcgagtttgg acagcccgtc caccatctcg gcaaccgtat
     3181 tgccgaacac cgccgccatt tccccttttg tcacgcccgt atcttccaat acgtcgtgca
     3241 tcacgcctgc acaaagaccc tgtatgtcca tatgccaaag ggcgagctgc gtcgcaacgg
     3301 caatcggatg cgtgatgtag ggctccccgc ttttgcgggt ttgcccgtcg tgggcgcgaa
     3361 acgcataggc gacagctttt tcaagctccg cctgttcctc gggcttgagg taggaggcgg
     3421 tatggaaaag cagggcacgc gcttcggcgg tcagggggtc gtaaggtgcg gtgggttgag
     3481 ggacaggcat ttcagacggc tttcggaaca tattttattt ttcgtttcaa accgtcggac
     3541 tgcacggcgg cagaatgtgc cgacgtgcgt ttccggcaga atttatttat tgcgcgtcaa
     3601 cagttccgta ccgatatgcc cggcggcgat ttcccttaag gcggtaacgg tcggtttgtt
     3661 attgcggaca tcgtccacaa gcggcgtatt gccattttca agctggcggg cccgacgggc
     3721 cgctaccaat gtcaggtcaa aatggttgga aatttttccg gtacagtctt cggtggtaat
     3781 acgtgccata ttatttgctt tctttcaaaa atatttaaaa taggaaactg ggtattttcg
     3841 cggtttttta ggaattttcc aacaaatctg caataaatcc cagttgccgc gaccttttca
     3901 gacggcaggc attcacaata tggcgcaaat cctcctccgc ccgcgccaag tcatcattga
     3961 ccacgacaaa atcgaacaat acggactgtt cgatttcatg ccttgccttc gacagcctcc
     4021 tttggataac ttcccgactg tccgtcccgc gtccgttcag acgtgcagca agcacatcga
     4081 aagacggcgg caggataaag atgccgacgg cttccggcag cgcgttgcga acctgcgccg
     4141 cgccctgaac gtcgatttcc aaaattacgt catagcctgc cgccgccaaa gcattcacgc
     4201 cctccgcgct tgtgccgtaa tagttgccga acacgtctgc gtattccaaa aaagcttcct
     4261 gcgcgataag cgactcaaac tcttctttag aaacaaaatg ataatgtacg ccgtttactt
     4321 cgccttcacg cggcggacgc gtcgtgtgcg atacggaaac gcgcaaaccg ttatggtttg
     4381 ccaacagccg cgacaccagc gtggttttgc ccgtgccgga agcggccgaa atgataaaga
     4441 tgttgccttt tcgataagcg gacatatttt ttacctgtat attttccagc cgattgtatc
     4501 acaacggaca ctcggtttcc tatttgccga tgcccatatt ttgccgctat tgttttgatt
     4561 gatttggcaa gcggcaggct gacggctaca atatggcgtt aaaaacatca aacttggaac
     4621 acgcaatgct ggttcatccc gaagctatga gtgtcggcgc gcttgccgac aaaatccgca
     4681 aaatcgaaaa ctggccgcaa aaaggcatct tattccacga catcacgccc gtcctgcaaa
     4741 gcgcggaata cttccgactt ttggttgatt tattggttta ccgctatatg gatcagaaaa
     4801 tcgacatcgt tgccggtttg gacgcgcgcg gcttcattat cggcgcggca ctcgcctacc
     4861 agctcaacgt cggtttcgtc cccatccgca aaaaagacaa gctgcctttt gaaaccgtat
     4921 cgcaaagcta cgcgctcgaa tacggggaag ctgcggtgga aatccacacc gatgccgtca
     4981 aacccggttc gcgcgtgctg ctggtcgatg atttggttgc cacgggcggc acgatgcttg
     5041 ccggactgga gctgatccgc aaactcggcg gggaaattgt cgaagccgcc gccattttgg
     5101 aatttaccga ccttcaaggc ggcaagaata tccgtgcaag cggcgcgccc ttatttaccc
     5161 tgcttcaaaa cgaaggctgt atgaagggct gaaaaccgac cctgccgtct gaaaccggca
     5221 gggttgttat tatgcgttca aatcacgccc aaatcttgca agcccctcaa cacaccgtcc
     5281 tcatcaacgc tggggcaaac atatttcgcc gcctctttcg ccgcctgttc cccgttgccc
     5341 attgccacgc cgaacccgac ttctgacagc atttccacat cgttcaaacc gtcgccgaac
     5401 gccatcacgt ctgccatttc caaacccaat gccccaacca cgcttctgat gccgtctgtt
     5461 ttcgacattc ccgcaggcag cagatcgacc gcttcctcgt gccagcgcac cgttttcaag
     5521 ccttcccgtt ccacaatatc cgaccagggc ggcatttcgt tttcctccgc aaacaccagc
     5581 atctgataca ccggtttgct tgaaaaataa tccttatcgg caaaaaaatc gctggcgata
     5641 tgctgcaagg cgcggcacac gcattccgac agcgcggaca cggcgatccc ctctccgccg
     5701 acaaacgcat aatccatgcc caagccatcc aaatgcgcgc aaaccctgcc catcaaaccg
     5761 gcatccatcg gtacttcgcg cacagtttta ccgtgcagca gcgcaaactg tccgtttatc
     5821 gttaccacgg catccatacc cgtttccgcc atcatgtccc tgaccttttc gggaatcgtc
     5881 gccaaagacc gccccgttgc caacgccgtc aatatgcctt tgccgcgcaa agccgccacc
     5941 gccgttttca cggaaggacg caaggtatcc gtatatttgc ggtacagcgt atcgtcaata
     6001 tcgaaaaaca cgattttagg attcatcaca ttctctctcg cattcaaact gccgcattgt
     6061 atcccaatca ggcaaatact tgataaatcc ttataaattt cccggcaaaa ttgaccgcga
     6121 acacgaaaag gcggataatc cgcccatcct caaacccttt tcagacggca tttgcagcaa
     6181 tgccgtctga aacattttta caaagcacac aaatcatgtt tcaacacaca ggacgacaca
     6241 taaagcgtcg ccctatatgt tgccctgatt cggaaagggt tacacccctc ccaaataaag
     6301 tctgattcta ccgccctaaa gggcggggtt tcaaccgaaa aggaaacacg atgaaagcac
     6361 ccgaactctt attgcccgcc ggcggattgg aaagaatgcg cgccgcctac gattacggcg
     6421 cagatgccgt ttacgccggc agcccgcgtt actcactgcg cgcccgcaac aacgaatttg
     6481 ccaaactcga cgttctcgaa caaggcatta aagaagcgca cgagcgcaac aaaaaattct
     6541 tccttaccgt caatacgctg ccgcacaact ccaaactcaa aaccttcgtc tccgatatgg
     6601 agcccttgat tgcgatgaag cccgacgcgc tgattatggc ggatccgggt ttgattatga
     6661 ccgtgcgcga aaaatggccg gaaatgccga tccacctgtc cgtacaagcc aacaccacca
     6721 actactgggg cgtgaaattc tggcagaata tcggcgtcga acgcatcatc ctgtcgcgcg
     6781 aattgagtat ggaagaaatc gccgaaatcc gccaacaatg ccccgacatc gaactcgaag
     6841 tcttcattca cggcgcattg tgcatcgcct actccggccg ttgcctactc tccggctact
     6901 tcaaccaccg cgaccccaac caaggcacct gcaccaactc ctgccgttgg gactacaaag
     6961 tccacaacgc tacggaaagc gatgcgggcg atgcccagct tctgcaaggt ttcaactttg
     7021 aaaaagccca agaagaagcc aaccaaaact ttgaaggcat caacggtcaa aaacgccatc
     7081 cctacgccga caaagttttc ctgattgaag agtccaaccg cccgggcgag atgatgccga
     7141 ttatggaaga cgaacacggc acctacatca tgaactccaa agaccttcgc agtattgaag
     7201 tggttgagaa actcgccaaa atcggcgtgg acagcctcaa agtcgaaggc cgtaccaagt
     7261 cgctctacta cgttgcacgc gtggctcaat cctaccgcaa agcgattgac gatgccgttg
     7321 caggccgtcc gtttgattac agcctgttga gcgaactcga aggcctcgcc aaccgcggct
     7381 acaccagcgg cttcctcgaa cgccaccaaa cccaagacta tcaaaactac ctgaccggcc
     7441 actccatcgc caaacaaagc caatatgtcg gccacgttac cgaaatcgac gctgaaggtt
     7501 gggcaacggt ggaagttaaa aaccgctttg ccatcggcga ttcgctcgaa atcatccacc
     7561 cgagcggcaa ccaaaccatc aaattggaac aaatggcccg aaaaggccag cctgtcgatg
     7621 ttgcacccgg caacggcatc caggtcaaaa tccccaatat gcggggcaaa gaaaaagccc
     7681 tcatcgcacg cgtattgaac ccctgagcca caatgccgtc cgaaccccgt tttcagacgg
     7741 cattttgttg aatcttacgg tacaatggca atgatttccc accgcaagca aggatatccg
     7801 acatgaaaaa aaatcctcat actctccgcc gccgccctga tgctggcagc ctgccaatcc
     7861 ggcagcgcac ctaaaaacgc gcacacggca tcccccggca caccggccgg agaatcatgc
     7921 aaagtcatcc ggggcgacac cgcaggaagc ggcaaaaaca tcatttaccg ttgctgcaac
     7981 ggtcaggcgg caataaatgc agccattgca gacggcgtat tggaatcagg gattcccgtc
     8041 agcttcggcg gcgggggcgt accggttgca aacggcagga atctagttac ccgtcaggcg
     8101 gcaaacggca taggcaaatc cgactcagaa gcctacgaac gcgccctaat caatgccgcc
     8161 cgcaaattcc aacagaccgc aggcaaactc ggcggacgcg gcgttaccgg cttccacagc
     8221 tactttgaca agcaaccgct gcaaggcggg caatacgact gtcaggcagg ctcgttccac
     8281 gtccgcgtcg tcatgcgcgc caatgtcgtc cgttaacata tcggcaatca aaaaatgccg
     8341 tctgaaaccc gttttcagac ggcatttttt caggctttac cggcaattcc ttcaacatcc
     8401 cactccggct gtgactgtaa cactgtagca gcaaggtata cggatatata gtggattaac
     8461 aaaaatcagg acaaggcggc gagccgcaga cagtacaaat agtacagcaa gacgagccaa
     8521 cgctgtactg gtttaaattt aattcactat attatcactt tccgtcatcc taaccatata
     8581 atatcaaaca aaagccccgg tctatccgca ccggggcttt cgtcaaatca aggattcaaa
     8641 cgggattatt gggttttctt accaccaaat acgccgaagc tgttatttgt atatgtcttg
     8701 gcctgttttg gttcatcctt aacatagctg tacctgcctg ccatttctgc agccttggca
     8761 ccatagaatc ctccagagat actacctttc tcaccgtttt tccaagtacc ggtaaagcgg
     8821 ttgccatcaa gacttccctc gaattcctag gtacccatat acaatccgtc accactgtta
     8881 atcttaccgt tcagggattt accggcaaaa ttgacagtag cagtaaacga accggctgca
     8941 cggaatgaat taccttcatt aaaccaatta ccttcggtca agttgcgcga acggaaatgc
     9001 aatacatcgc cgctataagt aaccgtatcg ccgggcagac tgtcgctcaa ctttccttgc
     9061 acaaagagtg cgtatgaacc atctgccaat ttagccgcac cataaataag attttcaaaa
     9121 ccttgggaag taataatctt atcgaagtct gtccaaagct tcaccctcct tgacagctgt
     9181 tcatcagcca ctgtcaaatt aatagtttcg ccattgatga ccagcttcgt gatttcacct
     9241 tccccgtaaa aatatttttc acccaactca ccggttttca atggtgaggc agccggtgct
     9301 gaaggttcgg gattggcagg cgccgggttt gatgcacccg gaacagtcgg ggtaggctta
     9361 acacttggcg cgtctccgcc tcccgaacta caagctgaaa gagctagacc gcaggcgatg
     9421 gcaagtgcac tcaatttaaa tgacgaattc gacataacat tctcctaatg acatggataa
     9481 caaaaataag ttcatcctct tttacgaaaa ggcatgatgc ttattcataa atttattgaa
     9541 aaaaaatttc aagttttcat agtcggttgc aaatatgttc cggcaaacag ctgcgtatca
     9601 tataaagcgc aactccataa aaacaccgat acctgatttt tgcattactc aatgcctgtg
     9661 cggcatcatt ccttccggcg cttcggcatc agcggccaag ccaaaggttt cgcgcaacac
     9721 gactttgtaa aatgcaaagg cttcgcgcgc gccttggatg gcttcggctt cggcttcggg
     9781 agtcaggttc aaagcgttca gatgctcgac gaaggcgcgc cagtgtttgc cgcgcccgtc
     9841 gggatgcgga gcgaggtggc gcgcgccgtg ttcgccgttg taatcgagtt tttgggcgtg
     9901 tttgaacaaa aatgccgcgc ccaaattgga tccttcggcg caataaagcc agccgattgc
     9961 tttgttgccg gtttcatgcg gcagcggttt gccgtattcg taaggtttgt cacccaaatc
    10021 tgcaaggtct tgcgttacgg catcgtatcg agccatgtat tccagctcgg gaatggcttt
    10081 gtttaattcg gcatctttat agatgtggtc gacagccttg tggaaaacgg attggagttt
    10141 caaaaatttg atgtagtttt ctttgctgac aaacggttgg acagacataa cgaggttatc
    10201 cacgctgtcg tgaaccgccg tggtatccgc cttcaagcgt ttggcaaatg tcagggcttg
    10261 attttcggtt tcactcatat tttttccttt gtcggtaagg gataaggatg cggtgcgggc
    10321 aaaatccgca cttgcccgca tatatagtgg attaacaaaa accagtacgg cgtttcctcg
    10381 ccttagctca aagagaacga ttccctaagg tgctgaagca ccaagtgagt cggttccgta
    10441 ctatttgtac tgtctgcggc ttcgccgcct tgtcctgatt tttgttaatc cactataaaa
    10501 ataataaaga atcataaacg aaatttatta tcacatattt ttggaaaaaa tatcatttgc
    10561 gtgatgtttt taagcaggta ttttactatt ctttacagaa tcgggatttt atcaaatggg
    10621 ttcggcagtc ggcggacagc cgctcgaaaa aatatttttg ccggacacca agggtttgtt
    10681 catactgccg aacctgccgg ttttgcatcc tgattgggtg tatcgctttt tttcctttat
    10741 aatgccgcca cttatatttg ccactttccc gatgaagccg tttgccgaaa atatccccca
    10801 cagccttcgc ggcaactgcc gcgatgaagc cctgccgccg catacggtag attgcccgga
    10861 atgcggctgc cgcgcggatg tgcctcggtt ggacaggggg gaggcggcgt tctgcccgcg
    10921 ctgcggctat aagctcttca gggtgggcag gcatcctttt tccgccccgc ccgcttatgc
    10981 ggcggcttcg ctgattttga tggcgtttgc ttacggtatg acgtatatcg aggtcgggat
    11041 accgggtgcg gcatccgtcc tttcgctgcc cgagatgatg cgcctgatgg tgtttcagga
    11101 ttatggcttt ttggccgaag tgatgtttgt gctgaccttc ggcgcgccgg ttctgttcct
    11161 tttgctgtgc ctgtatgtct atgccgcgct gatacggaaa cgggtgtatc ctgcgctgcg
    11221 tttggcaacg cgcgtaatgg tgcgcttgag gcaggcgatg atggtggatg tgttttttgt
    11281 ttccactctg gtggcgtata tcaagctctc gtctgtggca gaggttcgct tcgggccggc
    11341 gttttatctg atgttcgcgc tgtcggttat gctgattcgg acttcggtat cagttcccca
    11401 gcattgggtg tattttcaaa tcgggcggct gacgggggat aatgcggttc agacggtcac
    11461 tgaagacaaa atctgttgta gccgctgcct gtatttccgc gataaagatg agcaaccttg
    11521 cggcgtatgc ggtgcggact tataccgtcg ccgcccgaaa agcctgagca tctcgctggc
    11581 gtttttagtt gcggcgttta tcctgtattt ccctaccaac atcctgccga ttatgatttc
    11641 gtccaacccg acggctttgg agatcaatac gattttcaac ggcattgttt atatgtggga
    11701 cgacggcgac cgcttgattg ctgtgattat ctttagtgcc agtattatgg tgccggtttt
    11761 gaagattatt gcgatggcgg ttttgattta ttccgcatac ttcaaacccg tgatgagcgc
    11821 ggacaagatg tcggttttat atcggatcac cgaatccatc ggccgctggt cgatgattga
    11881 tatttttgtg attattattt tgatgtgttc gttccacact tatgccgcgc gcgtcattcc
    11941 gggcagtgcg gcagtctatt tctgcctggt cgtgattctg acgatgctgt ccgcctatta
    12001 tttcgacccg cgcctgcttt gggacaaacg cgcttcagac ggcattgctt tcaatgaaac
    12061 ggaaaaatat gactgacaac agccctcctc caaacggaca cgctcaagct cgcgtccgta
    12121 aaaacaacac cttcctctcc gccgtctggc tggtcccgct gattgcgctg attgccggcg
    12181 gctggctttg ggttaaggaa atccgcaaca ggggacctgt ggttacgctc ttgatggaca
    12241 gcgcggaagg cattgaggtc aacaatacgg tcatcaaagt attgagcatc gatgtcggac
    12301 gcgttacccg aatcaaactg cgcgacgacc aaaaaggcgt ggaagtaacc gcccaactca
    12361 atgcggacgt atccggcctc atccgcagcg atacccagtt ttgggtggtc aagccgcgta
    12421 tcgaccaaag cggcgtaacc ggtttgggta cgctgctttc gggttcgtac atcgccttta
    12481 cacccggcaa aagcgacgag gcaaaagacg tgttccaagt gcaggacatt ccgcccgtta
    12541 ccgccatcgg gcaaagcggg ctgcgcttga atttgattgg taaaaacgac cgcatcctca
    12601 acgtcaacag ccctgttttg tatgaaaact ttatggtcgg gcaagtcgaa agcgcgcatt
    12661 tcgacccgtc cgaccaaagc gtgcattaca ccatcttcat ccaaagcccc aacgacaaac
    12721 tgattcattc cgccagccgt ttttggctgg aaagcggcat caatatcgaa accacaggca
    12781 gcggcatcaa actcaattcc gcccctctgc ctgccctgct gtcaggcgcg atttcatttg
    12841 attcgccgaa aaccaaaaac agtaaaaacg tcaaaagcga ggacagcttc acgctttacg
    12901 acagccgcag cgaagtcgcc aacctgcctg atgaccgttc gctgtactac accgcgtttt
    12961 tcaaacaatc cgtgcgcgga ctgaccgtcg gttcgcctgt cgagtacaaa gggctgaatg
    13021 tcggcgtggt ttccgatgtt ccttatttcg accgcaacga cagcctgcac ctgtttgaaa
    13081 acggctggat tcccgtacgc atccgtattg agccttcccg tttggaaatc aatgccgacg
    13141 aacaaagcaa agaacattgg aaacaacaat ttcagacggc cttaaacaaa ggcctgaccg
    13201 ccaccatctc cagcaacaac ctgctgaccg gcagcaaaat gattgagttg aacgatcagc
    13261 cttccgcctc gcccaagctg cgaccgcata ccgtttatgc aggcgatacc gtcatcgcca
    13321 cacggggcgg cggtttggac gacttgcagg tcaaactggc ggatttgctg gacaagttcg
    13381 acaaactgcc tttggataag acggttgccg aattgaacgg ttcgcttacc gagctcaagt
    13441 ccacactcaa atctgccaat gccgccctaa gctctatcga caaactggtc ggcaaaccgc
    13501 aaacgcaaaa cattccgaac gaactgaacc aaaccctgaa agaattgcgt caaaccctgc
    13561 aaggcgtatc gccgcaatcg cctatctacg gcgacgtaca aaatacgctg caaagtttgg
    13621 acaaaacctt aaaagacgtt caacccgtca ttaacacttt gaaagaaaaa cccaacgcgc
    13681 tgattttcaa cagcagcagc aaagacccta tcccgaaagg aagccgataa tgcgcctttt
    13741 ccccatcgcc gccgccctga cgcttgccgc ctgcggtact atgcaaagca cacaatattt
    13801 cgtgttgccc gacagccgct acatccgccc tgcaacgcaa ggcggcgaaa ccgccgtcga
    13861 agtccgcctt gccgaaccgc tcaaacgcgg cggactggtc tatcaaaccg acccctaccg
    13921 cctcaacacc gcacaaaacc acgtttgggc agacactttg gacgatatgc tcgaagcggc
    13981 gttgagcaat gcattcaacc gtttggacag cgcacgcatc tttgttcctg cctcacgcag
    14041 cggcagtacc gaaaaatgga cggtctatat cgacgcattc caaggcagct acacgggcaa
    14101 aaccctcatc agcggctacg ccgtcctacc cgacggtatg aacagaccct tccatatcga
    14161 aaccgaacag cagggtgacg gctacgccgc gatgaccgcc gcactcgaac agggactgaa
    14221 acaggcggcg caacagatgg tcgagtaaaa cgtgaactat tgcgaatttg ccgcctcact
    14281 tcccgaaaac accgacaacc cgaacaaaca ttaccacgac acgcaatacg gttttccgat
    14341 tgaggacgac aatgaattgt ttgagcggct ggtgttggaa atcaatcagg caggattaaa
    14401 ctggacgctg atgctgaaga agcagcaggc gtttcagaca gcatttgaag ggttcgacat
    14461 caataccgtt gccgccttcg acgacaccga ccgcgaacgc ctgcttgccg acgcgggcat
    14521 cgtccgcaac cgcctgaaaa tcgatgccgc cattttcaat gcacggcaaa tccaagcgtt
    14581 gcaacaagaa tacggctcgt tcaagaactg gctcgacgcg caccatccgc gaagcaaaga
    14641 cgaatgggtc aaactcttta aaaaacattt caaatttgtc ggcggcgaaa tcgtcggcga
    14701 atttctgatg agtaccggct acctcaaagg cgcgcacgcc gaaagctgtc cggtttaccg
    14761 taaaaccctg aaataccacc cgaaatggct cgatgccgtc tgaaaaacca atgaacagaa
    14821 gaatcttcct cctcggtgca ggcgcgttgc tgcttaccgc ctgcggcaga aaatccgccc
    14881 gaacccacgc caaaattccc gaaggaagca ccgtacttgc cttgggcgat tcgcttacct
    14941 tcggctacgg cgcaaaccct ggcgaatcct accccgcgca actgcaaaaa ctgacgggtt
    15001 ggaatattgt caacggcggc gtatcgggcg atacatccgc ccaagccctg tcgcgcctgc
    15061 ccgcgctgtt ggcacgcaaa cccaagcttg tgcttgtcgg cataggcggc aacgactttc
    15121 tgcgcaaagt tcccgaggag cagacccgcg ccaatatcgc gaaaatcatc gaaaccgtgc
    15181 agaaggaaaa catccccgcc gtcctcgtcg gcgtgccgca catcacactg ggcgcgttgt
    15241 tcggacattt gagcgaccat ccgctgtatg aggatttgtc cgaggaatac ggcattccgc
    15301 tgttcggcgg cgcgtgggcg gaaattttgg gcgataataa tctgaaatcc gaccaaatcc
    15361 acgccaacgg caaaggctat cggaaatttg ccgaagattt gaatcaattt ttgagaaaac
    15421 aggggtttag ataaacaaag gtttatccgc acccaagttg tttatataat catgaaccga
    15481 ctgggacacc aaactgcttc gggacgcata tgccgtctga agtgcaaagc ctacgccata
    15541 cagccgcatg aagttgcagc ggtatggcgt tttttgaaaa agacggcctg ccggttcaga
    15601 cggcatgacc gaccgtccga gcctgctgtg gataaagccc ggacaggctg aaatcatgga
    15661 atattgcgaa cctgaagaag catccgaccc gtacgcaaca tacaggcgtg ccaacctgat
    15721 ggcgggtctg ccgctgtttg tcgtgatttt ggttctgctc aatattgttt ttccgcttcc
    15781 ggcgcatccc ttagcttggc tggtgcctgc aggtttcatg gttttgggcg gcggctttcc
    15841 cttatcgctg ccgcttgtgg cgctgcttgt cctgacctgc tgcattctgg cgcattgtcc
    15901 gccattatcc cgtcttttgt gctacccttg cccgaatcat ccgatgtcta aaaattctgc
    15961 ctgatggcag ccctacaaac ccgaaggagt agaaatgaaa ctgtccgaac tgttcaaccc
    16021 cgacgaattt gccgcgcggc atttgagttt tggcgacgaa gcggcgttgc ttgccgctgt
    16081 cggcgagaaa agtatggacg attttgtcgg caacaccgtg ccgcaaagca tccgtatgcc
    16141 gtctgaactc gatttgcccg atgccctgac cgaagcggac gcgttggcaa aattgaaagg
    16201 cattgcgtcg aaaaacatga tcaacaaatc ctatatcggt ttaggctatt acccgacccg
    16261 cgtgccgaac gtgattttgc gtaacgtatt ggaaaatccg ggttggtaca ccgcctacac
    16321 gccgtatcag gcggaaatcg cgcagggtcg tttggaagct ttgttgaact tccaacaagt
    16381 gtgtatcgat ttgaccggtt tccctgtggc gggcgcgtct ttgctggacg aagcgaccgc
    16441 cgccgccgaa gcgatggcga tggcgcaccg cgtgggcaag gtaaaatccg agcgtttctt
    16501 tgtggacgag cgcgtgtatc cgcaaacttt ggacgtgatg aaaacccgtg ccaagtattt
    16561 cggcttcgag ctggtggtcg gcgattttgc ccaagccgac gaaggcgaat acttcggcgc
    16621 gctgttccaa tacgtcggca aagacggcga cgtgcaagac ttgcaggacg ttatcggccg
    16681 tctgaaagcc aaaggcacga ttgtcgccgt ttccgccgac atcatgagct tggttttgct
    16741 gaaaccgcct gccgaattgg gtgcggatat tgcgttgggc aacacacaac gcttcggcgt
    16801 gccgatgggc ttcggcgggc cgcacgccgc ttatttcgcg tttaaagacg agttcaaacg
    16861 ttccgccccg ggccgcatca tcggcgtatc caaagacgca tcgggcaaac ctgccttgcg
    16921 catggctttg tccacccgtg agcaacacat ccgccgcgaa aaagctacat ccaatatttg
    16981 taccgcgcag gcattgctgg cgaatttggc gggtatgtat gccgtttacc acggccctga
    17041 aggcgtgaaa cgcattgcca accgcattca cgcgctggct tctgcctttg ccgatgcgct
    17101 ggtttcagac ggcctgaatg tggttcacaa agtctttttc gatactgtta ccatcgattt
    17161 tggcagtaaa gagaaagcag accaagtgtt tgccgctgct ttggcgtcgg gttacaacct
    17221 gcgccgcgtc aacgatactc aagttgcggc tgcattccat gaaacatcgg catacgaaga
    17281 tttggtcgat ttgtaccgcg cgtttaccgg caaggatacg tttacatttg ccgatgatgt
    17341 caaaggccgt ctgaacgccg aattgctgcg tcaggacgac attctgcaac atcctgtgtt
    17401 caacagttac cacaccgaac acgaaatgtt gcgttatctg aaaaaactcg aagaccgcga
    17461 cttggcgatg aaccgcagta tgatttcatt gggcagctgt actatgaaac tcaacgcgac
    17521 tgcggaaatg ttgccgatta cttgggccga gttcaccgac atccatcctt acgctcccga
    17581 agcgcaaacc gccggctacc gcgaattgct cgccgatatg gaaaacagcc tgaaagccat
    17641 caccggcttt gacgcgattt ccctgcaacc aaattccggc gcacaaggcg aatacaccgg
    17701 tatgctcgcc atccgccgct atcaggaatc ccaaggcgaa gcgcaccgca acatctgtct
    17761 gattccaaaa tcagcccacg gtaccaaccc cgccaccgcc gccatgctcg gtttgaaagt
    17821 cgtcgtcgtc gacaccgacg aacacggcaa cgtcaacatt gacgatttga aagccaaagc
    17881 cgagcaacac cgcgacgctt tgtctgccat catgattacc tatccgtcca cccacggcgt
    17941 gtacgaagaa ggcatccgcg acatctgccg cattattcac gaaaacggcg gacaggttta
    18001 catggacggt gcgaacctca acgcccaaat cggcatcatg cagcctgccg aagtcggtgc
    18061 ggatgtgttg cacatgaacc tgcacaaaac cttctgtatc cctcacggcg gcggcggccc
    18121 gggcatgggt ccgattggct tgaaagccca tttggctccg tttgccccgg gccatacctt
    18181 gaccgacacc cacaacgcgg ctgccgatca aaccgccgtg gctgccgcag catatggttc
    18241 tgcatccatc ctgccgatta cttggatgta cctgaccatg atgggcaaac aaggcatgga
    18301 acaggcaacg cgctgggcat tgctcaacgc caactacgtc gccaaagcct tgggcgagga
    18361 ttatccgatt ctctacaccg gcaaaaacgg ccgcgtcgcg cacgaatgta tcgtcgactt
    18421 gcgtccgctc aaagccgaaa gcggcattac cgaaaccgac atcgccaaac gcctgatgga
    18481 ctacggcttc cacgccccga ccgtctcctt ccccgttgcc ggcacgctga tgatcgaacc
    18541 gaccgaaagc gagagcaaag ccgaactcga ccgcttcatc gccgccctga aacaaatcaa
    18601 acaggaagtg ctgaaagtcg ggcgcggcga atggccgaaa gacgacaacc cactggtcaa
    18661 cgcgccgcac accgccgcag atataaccgg caactgggcg catccgtatt cccgcgaaga
    18721 agccgtcttc ccgttgccgt tcgtccgcga acacaagttt tggcccttcg tcaaccgcgt
    18781 ggacgacgtg tacggcgacc gcaatctcgt gtgcagctgc ccaccgatgg aaaattatga
    18841 agactgactg ttgatatctt aaaaaatgcc gtctgaaaca ttttcagacg gcattttcat
    18901 caacggcaaa ccagttgcac caatacacgt atctcgacta taactttaaa acaaatgagt
    18961 taaaccagta tccatacatc agctttttta tcatcctact ttttattcat ccgatcgtgc
    19021 aaacagattt caaagatgaa aagcctattc acaccctttg atgtcatttc cacacggaca
    19081 aacaa
//
LOCUS       DAWKOX010000019        19049 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.019, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000019 DAWKOX010000000
VERSION     DAWKOX010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19049
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.019"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(483..854)
                     /locus_tag="WJK78_000475"
     CDS             complement(483..854)
                     /locus_tag="WJK78_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597442.1"
                     /translation="MRFYIDNKECDYIFFRKAVNISDDFIQSGFITPEGLITKNSNPK
                     LFNQYSKMVSKNKCQYEMVTFLSDEMKNIIELLSNDDAYIEFAYSEDFYVLPEIKIDK
                     RTLKSLNFYIDFGVKYIINKI"
     gene            complement(988..1431)
                     /locus_tag="WJK78_000476"
     CDS             complement(988..1431)
                     /locus_tag="WJK78_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597443.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAAAPLVAIGILHAGRFLAQRWVTQRVAAQALSRGANVYARTSQQAR
                     AVANQAWGRQNVIRHGQKEIHSNYSHFQNSSQKIRGHAFYGNKHR"
     gene            complement(1474..2343)
                     /locus_tag="WJK78_000477"
     CDS             complement(1474..2343)
                     /locus_tag="WJK78_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ7597444.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNSKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLINPNISFAAN
                     DRISLTGGIQWLGTQPDRIDGKKETARNTSTYAHFGTGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            2507..3430
                     /locus_tag="WJK78_000478"
     CDS             2507..3430
                     /locus_tag="WJK78_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ7597445.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHSLFEPGKVMFYYRETSRESEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(3508..4149)
                     /locus_tag="WJK78_000479"
     CDS             complement(3508..4149)
                     /locus_tag="WJK78_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ7597446.1"
                     /translation="MLKPETIHISGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(4204..4995)
                     /locus_tag="WJK78_000480"
     CDS             complement(4204..4995)
                     /locus_tag="WJK78_000480"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ7597447.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTIQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARSLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            5161..5236
                     /locus_tag="WJK78_000481"
     tRNA            5161..5236
                     /locus_tag="WJK78_000481"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5194..5196,aa:Thr,seq:tgt)
     gene            5271..5346
                     /locus_tag="WJK78_000482"
     tRNA            5271..5346
                     /locus_tag="WJK78_000482"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5304..5306,aa:Thr,seq:tgt)
     gene            5488..6279
                     /gene="panB"
                     /locus_tag="WJK78_000483"
     CDS             5488..6279
                     /gene="panB"
                     /locus_tag="WJK78_000483"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ7597448.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTETVACPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMHGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            6269..6445
                     /locus_tag="WJK78_000484"
     CDS             6269..6445
                     /locus_tag="WJK78_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597449.1"
                     /translation="MQTEQGLLLMPSESRFRRHFVLPCAARIIGAFCRAGSPKDKDYR
                     YANHTYHSRTARVA"
     gene            6402..7238
                     /locus_tag="WJK78_000485"
     CDS             6402..7238
                     /locus_tag="WJK78_000485"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ7597450.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYCELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            7403..9247
                     /locus_tag="WJK78_000486"
     CDS             7403..9247
                     /locus_tag="WJK78_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597451.1"
                     /translation="MLPNRFKMLTVLTATLIAGQVSAAGGGAGDMKQPKEVGKVFRKQ
                     QRYSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLE
                     EVLAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSV
                     QGRKKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTGEQRGRAAMTAAMIYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGS
                     NTELQAEALVQRSVVYDRLGKRKKMISDLERAFRLAPDNAQIMNNLGYSLLTDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            9387..9968
                     /locus_tag="WJK78_000487"
     CDS             9387..9968
                     /locus_tag="WJK78_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ7597452.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            9978..10823
                     /gene="ispE"
                     /locus_tag="WJK78_000488"
     CDS             9978..10823
                     /gene="ispE"
                     /locus_tag="WJK78_000488"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ7597453.1"
                     /translation="MNIADGRQAFSAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHESLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKH
                     PLLSV"
     gene            10831..10906
                     /locus_tag="WJK78_000489"
     tRNA            10831..10906
                     /locus_tag="WJK78_000489"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10864..10866,aa:Gln,seq:ttg)
     gene            10919..10994
                     /locus_tag="WJK78_000490"
     tRNA            10919..10994
                     /locus_tag="WJK78_000490"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10952..10954,aa:Gln,seq:ttg)
     gene            11003..11078
                     /locus_tag="WJK78_000491"
     tRNA            11003..11078
                     /locus_tag="WJK78_000491"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11036..11038,aa:Gln,seq:ttg)
     gene            11245..12228
                     /locus_tag="WJK78_000492"
     CDS             11245..12228
                     /locus_tag="WJK78_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ7597454.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            12295..12867
                     /locus_tag="WJK78_000493"
     CDS             12295..12867
                     /locus_tag="WJK78_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ7597455.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(12992..14161)
                     /locus_tag="WJK78_000494"
     CDS             complement(12992..14161)
                     /locus_tag="WJK78_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ7597456.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETL
                     TAAHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTIAEKEIVALENVKKRSRWQRLWACLTGQ"
     gene            14309..15835
                     /gene="ilvA"
                     /locus_tag="WJK78_000495"
     CDS             14309..15835
                     /gene="ilvA"
                     /locus_tag="WJK78_000495"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ7597457.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(15892..16965)
                     /locus_tag="WJK78_000496"
     CDS             complement(15892..16965)
                     /locus_tag="WJK78_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ7597458.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKEQICTKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(16962..17822)
                     /gene="cysW"
                     /locus_tag="WJK78_000497"
     CDS             complement(16962..17822)
                     /gene="cysW"
                     /locus_tag="WJK78_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ7597459.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(18074..18910)
                     /gene="cysT"
                     /locus_tag="WJK78_000498"
     CDS             complement(18074..18910)
                     /gene="cysT"
                     /locus_tag="WJK78_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ7597460.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
BASE COUNT         4543 a         4420 c         5306 g         4780 t
ORIGIN      
        1 tcctagttat ctaggacagc ccctaaactt tttggaagca tctctaattt attaatatcg
       61 ttcatatccc ctacacacag aaaaaatctt ggggaatttc ctttaatctt tttaataaat
      121 cttcacaaag cctaaaatga tttaatttta gtttcttttt atttttttga taaattctag
      181 ataacctcgc ttattaggaa aaatttcagg atatattcct ttttcttcta aagaagtata
      241 gtggattaaa tttaaatcag gacaaggcga ggaagccgca gacagtacaa atagtacggc
      301 aaggcgaggc aacgccgtac taatccacta tatatatcca ttcatataga gaaaaattct
      361 tatacccaat ataaaacaag gtctttcatt atattttgaa aaacctagaa gctttgtatc
      421 tattggttta tcaaaattaa taattattgc agaagacatg taggctaata atcttgattt
      481 atctatattt tattaattat atatttaacc ccgaagtcaa tatagaaatt tagtgatttt
      541 aaagttctct tatcaatttt aatctcaggg agtacataaa aatcctcaga ataggcaaac
      601 tctatatatg catcatcatt cgataataat tcaataatat ttttcatttc atccgaaaga
      661 aatgtaacca tctcatattg acatttattt ttagatacca tttttgaata ttgattaaat
      721 aattttggat tactattttt agtaattaat ccttccggag taataaaacc actttgtata
      781 aagtcatcac ttatattaac agccttccga aaaaaaatat aatcacactc tttgttatca
      841 atataaaatc tcatactctt taataatgaa atataagaat ttccagaatt acaagcaatt
      901 tgaaaaaaca tcattactcc taaaactcat aaatagtaag gaatatatat atatgcatat
      961 tccttactat tttttcacaa attatgctta tctatgctta tttccataaa aagcatgccc
     1021 tcgaattttt tgacttgagt tctggaaatg agaataattt gaatggattt ccttctgtcc
     1081 atgtctaata acattttgtc ttccccaagc ttggtttgct accgctcttg cttgttgaga
     1141 tgttcgtgca tagacattag ctcctcttga taaagcttgt gctgcaacac gctgcgtaac
     1201 ccaacgctgc gcaaggaatc tgcccgcatg caaaattcct attgccacca acggtgccgc
     1261 agccccttca gtttctttca tctccttttg agaaagctcc gccaactgca tcggcgcatc
     1321 tgcctgcgtg tggaacactt ggttttcaaa tgtctgattg tccaagccgt ttgccattgc
     1381 gggggcaatc atagacagca tcattacggc tgcggtgatt tgttttttca taataactcc
     1441 tttggattac aaggttggaa aatcaaaacc tgcttaaaat gtatgctgta cgccaaattt
     1501 cagttcggaa ctgctttgcc ctgaaacgtt gaaacgtgcg gatgcgttta aagccgtggt
     1561 tttggtgaaa ccgaaacctg tgccgaaatg agcgtaggtg gatgtgtttc ttgcggtttc
     1621 ttttttgccg tctatgcggt cgggctgtgt gcccagccat tggatgcctc cggtcaggct
     1681 gattctgtcg ttggcggcaa atgagatgtt ggggttgatc agcaggtagt tgcccgattt
     1741 gtagcggatg ccgtctgaaa gggttttgct gccgttgata cggtaggcgg cggtgaggga
     1801 aaggacaatc ggatctatgg ctttgtaggt ggtggcgccg atgagccagg attttcccga
     1861 cgaggctttg ttgcgcgatt tttcgtaaac cgtgctttca agaaagctga ttagggcggg
     1921 gtttttgtcg tctttaagga aagtgtggct gatgccgagg gatacgtcgg acatccgttt
     1981 gttgcgggtt ttgctgttgc cgtcgagttt gcgttcttcg tgccacagat agctgccgct
     2041 gccgtaaatg tcggtattcc cggtcagtcc gtagcgcaaa ccgagcgtgc caacgagcat
     2101 atcggtattg ctgccgtttt cttggatttc ggtcggaatg gggataaacg aggttgcgcc
     2161 ggtttggatg taaaccggtg cggcaagttc ggcgcggttg ttttcgctat tcaggtaggt
     2221 aagggaagtt tccagtttcc atttgccctt gtcagtcatt atgtcttcaa tcgtcaaggg
     2281 caggtcggca taagcggata aaggcaggat ggcgggcaag gcgggcaaaa agatgcgctt
     2341 catatttctc ctattgatat taattcttat ttactgataa taatgaatat ccgataatct
     2401 tgtctaaata aatttttaaa tcataaaaaa caatatgttt gtttttgtca attatgtttc
     2461 gatatgccgt ctgaaaagtt tgtgaaaaac ggttacaatc cgccgcatga aaaaacgcaa
     2521 taatcctctt ccgctgttga acggtgtcaa acccagttat ttggtgctgc cgcatgaaaa
     2581 gcagttttac gggctgccgc tgctgcattt tctgtgcatc cgctttcctt ttgtgggcgc
     2641 ggacgattgg cgcaggcggt tgaacagcgg ttttgtggtc ggttcggatg gtgcggcgtt
     2701 ggacgaacat tctttgttcg agccgggtaa ggtgatgttt tattaccgtg aaaccagccg
     2761 tgagagcgag ccgcgtattc cgtttgaaga aaagattttg catattgatg agcatttgat
     2821 tgtggtggac aaaccgcatt ttctgcccgt catccccagc ggcaggtttt tgcgggaaac
     2881 cctgctcacg cgcctgcgtt tgcggcctga attgcagcat ttgaatgttg aggacattac
     2941 gccgctgcac cgcttggaca aggatacggc aggcgtgatg ctgctgtcgc ataatcctgc
     3001 cacgcgcgga gcctatcaga cgatgtttca aaacaaaacg gtatggaaaa cgtatgaggc
     3061 gcttgcgccg acaaggacgg atttgccgta tccgctcgat gtggtttcgc gtttggtgag
     3121 gggtgagaaa ttttttacga cgcaagaggc ggaaggcgaa ccaaacgcac atacgacggt
     3181 cgaactgatt gaaaacaggg gggaattcag cctttaccgc cttacgccgc atacgggcaa
     3241 gaaacaccag ttgcgcgtgc atatgatggg tttgggtatg ccgctgttga atgacgcgct
     3301 ctatcccgtg ccgtctgaag cgggcagcga ggattatcgg aaacctttga agctattggc
     3361 aaaaaagatt gcgtttgcag atcctttgtc gggtcgggaa agggtgtttt gcagcggatt
     3421 ttgcctataa tgagagggaa cgcaaacccg tatcggcgga tgccgccgat acgggtttta
     3481 cattatcgat gccgtctgaa aggggtttta tccgttcagg catacgggcg cgaagcggag
     3541 gatggtgtcg cgcaggacga tgagtttgcc gtgaaagaaa tgcgtggaac cggcgatggt
     3601 aatgacgggc aaatcttgcg gttccgccca tttcagtgct ttcccgattt cgacgacttc
     3661 gtcttccgcg ccgtgtatca tcagcgtttt ggcaacattg ggaacggcgg acggctcggg
     3721 gcggccggta tagtggcaga ctgccgcgcc gatgagcagc aataaatcgg gtatgcgcgc
     3781 ttgtgcggca aatgtggcga cataaccgcc gaaggagaag ccggataagg caaattcggg
     3841 ggcttcggga tgttgggcac gggcatagtc gatgacggcg aggcagtctt gcgtttcgcc
     3901 gcgtccgtaa tcgtgtgtgc cttcgctgcc gcctacgccg cgaaggttgg gcaggtagca
     3961 gtggaagccg agtttgctta aggctttggc ggcagtttgg ataactttgt tggtgtttgt
     4021 tccgccctgg agggggttgg gatgattgat gacggcaaca ccgcgtgccg gtacttgttc
     4081 ggacgggata tggatggttt ctaaaatgcc ggcaggaccg gatatgtgta tggtttcggg
     4141 tttcagcata atgatttcct cttgattttc cgcatgttcc gatgcagccg tgaagatagt
     4201 tgcttaaagg tggaaatgct tgccgttgtt ggggttggac gctttcaggc cggcaagcat
     4261 acggtggaag tccaatccgt atgcgttgct cagtttgtcg gcacgttttt tgagtttgtc
     4321 tatgttttgc tctttggggc tgctttggaa ggccattacc gcgacattgc cgtggctttc
     4381 ggcaggaagt tccaagacgc gcccttcaaa aacgctcaac aaccgttcga tgaagcgttg
     4441 gtagcgtttg tcgccgctcc accagttggt tacgaatatg ccgtctgaag agagtgcgtt
     4501 tcggcagtct cggaaaaacg gttcttcaac cagcgcatcg atgatttgtt cgccgtcgaa
     4561 cccgtccacc aaaatcacat cggtgttgtg gcggaagact ttgatatatt ctgcaccgtc
     4621 tgcttcgata atttcaaatt tctcgccctc gaaaggcaac tcgaacaggc tgcgggcaat
     4681 ggcgatgacc tgcgggttga tgtccacggc ggtttggcgc gtgtcgggca ggtaggtgtc
     4741 tatccagcgt gcaaacgaac cgccgcccaa gccgatttgg gtgatatgct gcggaagagc
     4801 gtcggtaaac agcagccatc ccatcatggc acggctgtaa gagagtacca gctcggacgg
     4861 gtggtcgagg ttcattgagc tttggatggt gtcgctgccc aagtgaagcg aacggatatt
     4921 gccttcttcg gaaatgccga cttcgggaaa gccggatttt gcaggacgca ggcggcggta
     4981 gggatgtctt gccatcggtg tgaacggtcg gtttgaaagg cagatatttt atcagaatgc
     5041 cgatggttgt cctgcttcaa attaatttct tttcaaataa attacttatt cggatttgcc
     5101 ggggctttcg gataaattcc ttgccaaggt gcggcattgc ctgcataatt cgctttcttt
     5161 gccggtatag ctcagttggt agagcacctg acttgtaatc agggggtccc gagttcgact
     5221 cttggtgccg gcaccatttc tgctgatggt gttgcaaaac atttcagtaa gccggtatag
     5281 ctcagttggt agagcacctg acttgtaatc agggggtccc gagttcgact cttggtgccg
     5341 gcaccagatt tgacagtccg attgtgtaaa acagtcgggc tgttttgcat ttgcggcacg
     5401 gtcggtggca gggctgcggg catttcacta taatagcccg tttcaaactg aaaaggccgt
     5461 ctgaaaaggg cggggtaaca atatctgatg attactgtga acacactgca aaaaatgaag
     5521 gcggcgggcg aaaaaatcgc tatgctgacc gcttacgaat ccagttttgc cgcactgatg
     5581 gacgatgccg gcgtggaaat gctgctggtc ggcgactctt tgggtatggc ggttcaaggg
     5641 cggaaatcga cgctgcccgt cagcctgcgc gatatgtgct atcacaccga atgtgtagca
     5701 cgcggtgcaa aaaatgcgat gattgtcagc gatttgccgt ttggtgcata tcagcagagt
     5761 aaggagcagg cgtttgccgc cgccgccgaa ctgatggcgg caggagcgca tatggtcaaa
     5821 ctcgaaggcg gcgtgtggat ggcggaaacg actgaatttc tgcaaatgcg cggtattccg
     5881 gtttgcgcgc acatcggtct gacgccgcaa tccgtgtttg cctttggcgg atataaggtt
     5941 caggggcgcg gcggcaaggc gcaggctttg cttaacgatg ccaaggcgca cgatgatgcg
     6001 ggggcggcgg ttgtattgat ggagtgtgtt cctgcggaac tggcaaaaaa ggtaactgaa
     6061 actgttgcct gtccgaccat cggcatcggc gcgggggtcg attgcgacgg gcaggttttg
     6121 gtgatgcacg atatgctcgg tatttttccg ggcaagacgg cgaaattcgt caaaaacttt
     6181 atgcacgggc aaagcagcat tcaggcggcg gttcgggcgt atgttgccga agtcaaagcc
     6241 aaaaccttcc ctgctgcgga acatattttt gcagactgaa caaggtttgc tgctgatgcc
     6301 gtctgaaagc cgtttcagac ggcattttgt tttgccgtgc gcggcgcgta taatcggcgc
     6361 gttttgtcgg gcaggaagcc cgaaagataa ggattaccgt tatgcaaatc atacatacca
     6421 ttcgagaact gcgcgcgtgg cgtaaaaatg cgggaaaggt ggcatttgtg ccgaccatgg
     6481 gcaatctgca tgaagggcat cttgcgcttg tgcgtgaggc gaaaaaacgc gcggacagtg
     6541 tcgtggtcag cattttcgtc aaccgcctgc aattcggtca gggcgaggat ttcgacaaat
     6601 atccgcgtac tttgcaacag gatgcggaca agctggaagc cgagggtgtt gccgttgttt
     6661 tcgcgcccga tgagaaagaa ctctatccga acgtggaaca gcgttacaac gtcgaaccgc
     6721 ccaatctgca aaatgagttg tgcggcaagt ttcgtccggg acatttccgc ggggtggcga
     6781 cggtggtgtc caagctgttc aatattgtcg cgccggatgt tgcctgtttc ggcaaaaaag
     6841 actatcagca gcttgccgtg attaaaggtt tgaccgagga tttgaatttt gatgttgaaa
     6901 tagtgcctgt cgatacgggg cgcgcggaag acggtttggc actctccagc cgcaaccagt
     6961 atttgagtgc ggcggaacgc gacgaagcac cgcgcctgta ctgcgaatta aaggctgttg
     7021 ccgaatcctt ggcgcagggc agtttggatt atgcaggttt ggagcggcag gctgccgacc
     7081 atttgaccgc tgcgggctgg gtggtcgatt atgtcgaaat ccgccgcgcc gatacgctcg
     7141 aagtggcgcg ggcgggagat aagaaactgg tggtcttggc cgccgcccgt ctagggacga
     7201 cgcgcctgat tgacaatttg gaaataaaac tcccttaaac tgcaagcgtc gggaatgccg
     7261 tctgaagcgg atttgcgttt cagacagcat ttattttttt gaacggggtt tcgcaaatct
     7321 acaaacgatt ctgcttgtga taaagttacg cctgattata tgccgtctga aggttcggac
     7381 ggctgtcgga taaaggaaga ttatgttacc taaccgtttc aaaatgttaa ctgtgttgac
     7441 ggcaaccttg attgccggac aggtatctgc cgccggaggc ggtgcggggg atatgaaaca
     7501 gccgaaggaa gtcggaaagg ttttcagaaa gcagcagcgt tacagcgagg aagaaatcaa
     7561 aaacgaacgc gcacggcttg cggcagtggg cgagcgggtt aatcagatat ttacgttgct
     7621 gggaggggaa accgccttgc aaaaggggca ggcgggaacg gctctggcaa cctatatgct
     7681 gatgttggaa cgcacaaaat cccccgaagt cgccgaacgc gccttggaaa tggccgtgtc
     7741 gctgaacgcg tttgaacagg cggaaatgat ttatcagaaa tggcggcaga ttgagcctat
     7801 accgggtaag gcgcaaaaac gggcggggtg gctgcggaac gtgctgaggg aaagaggaaa
     7861 tcagcatctg gacggactgg aagaagtgct ggctcaggcg gacgaaggac agaaccgcag
     7921 ggtgttttta ttgttggcac aagccgccgt gcaacaggac gggttggcgc aaaaagcatc
     7981 gaaagcggtt cgccgcgcgg cgttgaaata tgaacatctg cccgaagcgg cggttgccga
     8041 tgtggtgttc agcgtacagg gacgcaaaaa ggaaaaggca atcggagctt tgcagcgttt
     8101 ggcgaagctc gatacggaaa tattgccccc cactttaatg acgttgcgtc tgactgcacg
     8161 caaatatccc gaaatactcg acggcttttt cgagcagaca gacacccaaa acctttcggc
     8221 cgtctggcag gaaatggaaa ttatgaatct ggtttccctg cacaggctgg atgatgccta
     8281 tgcgcgtttg aacgtgctgt tggaacgcaa tccgaatgca gacctgtata ttcaggcagc
     8341 gatattggcg gcaaaccgaa aagaaggtgc ttccgttatc gacggctacg ccgaaaaggc
     8401 atacggcagg gggacggggg aacagcgggg cagggcggca atgacggcgg cgatgatata
     8461 tgccgaccga agggattaca ccaaagtcag gcagtggttg aaaaaagtgt ccgcgccgga
     8521 atacctgttc gacaaaggtg tgctggcggc tgcggcggct gtcgagttgg acggcggcag
     8581 ggcggctttg cggcagatcg gcagggtgcg gaaacttccc gaacagcagg ggcggtattt
     8641 tacggcagac aatttgtcca aaatacagat gctcgccctg tcgaagctgc ccgataaacg
     8701 ggaggctttg agggggttgg acaagattat cgaaaaaccg cctgccggca gtaatacaga
     8761 gttacaggca gaggcattgg tacagcggtc agttgtttac gatcggcttg gcaagcggaa
     8821 aaaaatgatt tcagatcttg aaagggcgtt caggcttgca cccgataacg ctcagattat
     8881 gaataatctg ggctacagcc tgctgaccga ttccaaacgt ttggacgaag gcttcgccct
     8941 gcttcagacg gcataccaaa tcaacccgga cgataccgct gtcaacgaca gcataggctg
     9001 ggcgtattac ctgaaaggcg acgcggaaag cgcgctgccg tatctgcggt attcgtttga
     9061 aaacgacccc gagcccgaag ttgccgccca tttgggcgaa gtgttgtggg cattgggcga
     9121 acgcgatcag gcggttgacg tatggacgca ggcggcacac cttacgggag acaagaaaat
     9181 atggcgggaa acgctcaaac gtcacggcat cgcattgccc caaccttccc gcaaaccccg
     9241 gaaataatgc aggtccatcc tttcagacgg cataaggttt gccgggaagc tgcggcattc
     9301 gggcaaacgg cacgcagttc gcacgcgttt tgcacggcac accgaatcca ccggccggca
     9361 ggatggcatc cgttaaggaa attctgatga aacacaccgt atccgcatcg gtcatcctgc
     9421 ttttgaccgc ttgcgcgcaa ttacctcaaa ataacgaaaa cctgtggcag ccgtccgaac
     9481 acatcagcag ttttgcagca gaagggcggt tggcagtgaa agcggaaggg aaaggttcgt
     9541 atgcaaattt cgattggaca taccaaccgc ccgtggaaac catcaatatc aatacccctt
     9601 tgggcagtac gctcgggcag ttgtgtcaag acagggacgg cgcattggca gtggacggca
     9661 aaggaaatgt ctatcaggcg gaaagtgcgg aagaattgag caggcagctg gtcggtttca
     9721 aactgccaat ccaatatctg catatctggg cagatggcag gcgtgtggcg ggcgcgcctt
     9781 accgcatcct gccggacggc atattggaac aatacggttg gactgtcggc agaaccgccg
     9841 acagtggggg gcaagtccga acgttgcaac tgaataacgg aaatttgaac atcaggctgg
     9901 ttttcaccga aatcggtatg ccgtctgaaa ccgaaacccc ggaacgctgt gcggcgcgca
     9961 cgagataagg cggacagatg aatattgcgg acggacggca ggcgttttcc gcacctgcaa
    10021 aactgaatct cgatttgagg attaccggca ggcgggaaga cggttatcac aatatcgaaa
    10081 gcatattctg cctgatagat ttgcaggata ccgtatattt gaaaccgagg gacgacggca
    10141 aaatcatcct gcacaatccg gttgatggaa tgccgcagga agtagatttg agctaccgtg
    10201 ccgcatcgtt gctgcaaaaa tatgcgcgca accccgccgg cgtggaaata tggctggaca
    10261 aaaaaatccc gacaggggcg ggtttgggcg gcggaagctc ggatgcggca accgttttgc
    10321 tggtgttgaa ccgttggtgg cagtgcggtc tgacgcagcg gcagctcatt gattcgggcg
    10381 cggctctggg ggcggacgta ccgtttttta ttttcggcaa aaatgcgttt gcgcggggta
    10441 taggcgacag gctggacgaa atggatattc cgaaacagtg gtatgtcatc gtcaaaccgc
    10501 ccgtccacgt ttccactgca aaaattttca cacacgaaag cttgacacga aattccgcct
    10561 caagcataat gccgactttc caaaatctgc aaccgtttag aaatgatatg caggcagttg
    10621 tatttaaaga ataccctgaa gtttggaaag cctattccga gttgtcccga tatggatttg
    10681 ccttaatgac aggttccggt gcgtgtgtat tcacggcgtg tcaagatagg aatagcgcat
    10741 acaatatata ccgacaagtt tcagatttgt acgaggcata tttggcagag ggtctttcaa
    10801 aacatccttt gttgtccgta taaacattgt tggggagtcg tcaagcggtt aagacactgg
    10861 attttgattc cagcatgcga aggttcgaat ccttcctccc cagccaagtc aaacgagttg
    10921 gggagtcgtc aagcggttaa gacactggat tttgattcca gcatgcgaag gttcgaatcc
    10981 ttcctcccca gccagccctt tttggggagt cgtcaagcgg ttaagacact ggattttgat
    11041 tccagcatgc gaaggttcga atccttcctc cccagccaaa taaaagcgtg taagcctgct
    11101 tacacgcttt tatttcatag aaataaaaat attgaaatgc ctttgtttgt gtcggatgtt
    11161 gcaggtataa tgtcgggctt ggtacaagca gagggaagca ttgtgttttc tgagcggaag
    11221 ttaaacataa aatcaggtga gaatatggct gcgtacgaca gtttgatggt atttacaggc
    11281 aatgccaatc ccgaattggc acaacgtgtt gtcaggcatt tggacatttc tttgggcaat
    11341 gcttccgtat ccaagttttc agacggcgaa gttgccgtcg aactgttgga aaacgtacgc
    11401 gggcgcgatg ttttcatcct tcagccgacc tgtgcgccga ccaatgacaa cctgatggaa
    11461 atcctgacga tggcggatgc actgaagcgt gcttcggcag gtcgtattac cacagccatt
    11521 ccgtatttcg gctatgcgcg ccaagaccgc cgtccgcgtt ccgtccgcgt tccgatttct
    11581 gccaaactgg tggcaaatat gctgtattcg gcagggatcg accgtgtttt gactgtcgat
    11641 ttgcatgccg accagattca aggtttcttc gatattccgg tggacaatat ttatgccacc
    11701 ccgattctgt tgaacgacat caaacaacag cggattgaaa atctgaccgt cgtcagcccg
    11761 gacatcggcg gtgtcgtccg cgcccgcgcc gtggcaaaat ccctgaatgc cgacttggca
    11821 atcatcgaca aacgccgccc gaaagccaat gtggcggaag tcatgaacat catcggcgat
    11881 attcaaggca gaacctgtct gattgtggac gatatgattg acactgcaaa tacgctgtgc
    11941 aaagccgccg tcgctctgaa agagcggggg gcggaacgtg tcttggcata tgccagccac
    12001 gccgtattct ccggagaggc agtcagccgt attgcctcat ccgaaatcga ccaagtggtc
    12061 gtaaccgata ccattccttt gtctgaagcg gctaaaaact gcgaccgtat ccgtcaggta
    12121 acgattgccg gtctgttggc cgaaaccgtc cgccgcatta gcaatgaaga atccgtctca
    12181 tatcttttca atgaagaagt gatgacaggc agcatgttgc tgccataagc ccgaagccgt
    12241 cttaagctgg tcgcggccga tgacggcgat tttacctaac ttggagtatt taacatgact
    12301 tatgaaattc aagcctctgt tcgtgaagca caaggcactg gtgcgagccg ccgcctgcgt
    12361 cgcgaaggcc aaatccccgg cattctgtac ggtgaaggtc aagagcctgt tgcaatcgct
    12421 gtggatcaca aaaccgtatt ctacgcattg gaaaaagaat ctttccatac tgcgttgatt
    12481 aagttgtctc tgaacggtga aaccaaagac gttatcgtcc gcgatttcca aatgcacccg
    12541 ttccgccgcg aagttcaaca catcgacttc caagctgtga aagcagacca acccgtacgc
    12601 atccgcgttc ccctgcacat cgttaacgct gaaaattccc aagcggtcaa actgcaaggc
    12661 ggccgcgtat ctctgttaaa cacttctgtt gaagtagttg ctttgcctgc caacatccct
    12721 gctttcttgg atttggattg tgccgaagtg gttgccggcg acattctgca cttgtcagac
    12781 atcaaactgc ctgaaggtgt agaaagcgtt tccctgaaac gtaacgaaaa tctggctgtt
    12841 gctaccgtta ccggtaagaa acgctaattg atttcagcag cagggcggcg cgtatgcaat
    12901 acgtaccgcc ctgttgtttt atgccgtctg aaccgtgttt cagacggcat ttctttattt
    12961 gttggaaaaa cgggatattt gaaacggcag attactgccc tgtcagacac gcccaaagcc
    13021 tttgccaccg gcttcttttt tttacatttt ccagtgcgac gatttctttt tcggcaatgg
    13081 tgtatccgtt ttgcctgatt ttgatttttc ctaaaatctg cccttttttt accggggcgg
    13141 gaatcggctg tatggtttct agaatttgtt ctgccatttt cgcttcctta tgtggcagag
    13201 tgatgtaggc ttctttgagg aagcctgcgc ggacggtttt tttgctgcct ccggaaattt
    13261 ggatttgggc aacggttttg cctttcggat atattttggg cgtatcgaag gcctgcaatg
    13321 cccggttcag cagcttgctg ttgtctgatg cgcgtgtttc cgccgattcc gaacccaatg
    13381 tgatgacaag gatgtgcctg ccgttgccgg agtatgacac ggcaaggttg tagccgccgc
    13441 tttctgtgtg tccggctttc agaccgttta cattgttgtc cctatataaa aggatattgc
    13501 ggttgttttg ctctatattt ttgaatttga aagatttgat ggaaaacagc gggtaatatt
    13561 ccggaaagtc gcgcatcaat gcttcagaca gctgggcgag gtctttggcg gtggaaacct
    13621 gtccttctct actcaagcct gtcgggtttt tgaatacagt gttcttcatg cccaagcgtc
    13681 gggcttcttt gttcatttgt tgcacaaaat tttcaatcga gccgttgccc agccggccgg
    13741 caagggttag ggcggcatcg tttgcggata gtgcaatcat gccttttaag agtttgtcgg
    13801 tgctgaccgt atcgccggga cgtacaaaca ttctgcttcc ttctgaagcc catgcggatt
    13861 cgggtatttt taagttttct tcagattgga tatttcccga tttcatgttt ttgaaaacca
    13921 aatatgcggt catcagttgg gttagtgccg ccggttcgac aggggtattg atgtttttgg
    13981 cggataaagt ctgtctgctt tgaaggtcga taacgatgtg tgccgctgtg agggtttcgg
    14041 gtgtttggaa cgtgggggcg gcgtgtaccg ccggtttgtt gggcgcgggc gatgcggccg
    14101 ttgcgtgaga aacgcctaag atgatggaaa gcaggacggg caggatttta tgtgctgtca
    14161 tgaaatattc taattgtgtg cgtgtttcag tctgccgatt atacgcttag ggtgtctgat
    14221 cgggcggatt tttcttgctt tcgcgccgtc ttgggcgtat ggttttgggt tttgcgattt
    14281 taataaaccg attatcccat attgaattat gaacacaccc cttccttatt ccaattacct
    14341 catccgcatc ctgacggcat ctgtctatga tgtcgcggtc gaaacgcctt tggaaccggc
    14401 acgcagcctt tctgtacgtt tgaaaaacaa catccttttg aaacgcgaag atttgcagcc
    14461 ggttttttcg ttcaaaatac gcggcgcgta caacaaaatg tccaagttgc cgaaagatgc
    14521 gctcgcttgc ggcgtgattg cggcaagcgc gggcaatcat gctcaaggcg tggcattgtc
    14581 cgcacagcgt ttgggctgcc gtgccgttat cgttatgccg gagactacgc cgaaaatcaa
    14641 agtggatgcg gttaagagcc gtggcggcga ggtggttttg cggggcgttt catacaacga
    14701 tgcctacgat tatgcgatgg agttggcgga aaaagaaggg ttaacctata tcgcgccgtt
    14761 tgatgatcct gatgtgattg cgggacaggg gacggtgggg atggaaattg tcagccagca
    14821 tcccgatcca atccgcgccg tattcgtacc gataggcggt ggcggtttgg cggcgggcgt
    14881 ggcggcattt atcaagcagg tccgtcccga aatcaaagtt atcggcgttc agaccaacga
    14941 ttcctgctgt atgaagcagt cggtcgaagc gggtgaaatc gtccatttga aagatgtcgg
    15001 gctgttttca gacggcactg cggtcaaagt cgtcggaaac gaaaccttcc gcctctgcaa
    15061 agaacttttg gatgaaatca ttacagtcga taccgatgcg gtttgcggcg cggtcaagga
    15121 tattttcgat gacacgcgca gcattaccga gccggcgggc gcgttggcgt tggcgggtct
    15181 gaaagcctat atcgcccgag aaggcgcgga aaaccaaacc ctgattgccg ttaccagcgg
    15241 tgcgaatatg aattttcacc gtttgcgcca tgtgtcggag cgtagtgaat tgggcgaggg
    15301 caacgaaggt atttttgccg ttaccatccc cgaagaacgc ggcagcttcc ttaagtttgt
    15361 caatatattg ggaaatagga atattaccga gttcaactac cgctacggag acgatgaaaa
    15421 agcgcatatc tttgtcggac ttcaagcggc aggtccgcag gatttggcgg ttatcggtag
    15481 ccggttggat gaggcgggat tgcccaatgt cgacctgacc gatgatgaga ttgccaaaat
    15541 ccatatccgc tatatggtcg gagggcggac ggacaaagta gaaaacgagc gtctggtcag
    15601 ttttgagttt ccggagcgtc cgggggcgtt ggcgcgtttt ttgaaccata tgcagggcgg
    15661 ttggaacatt acgctcttcc attaccgcaa ccacggtgcg gattacgggc ggattttggt
    15721 cggtatcgat gtgccgccgc acgatgccgc cgcatttgac ggtttcttgg aaagtctggg
    15781 atacagctat cacgaggaaa cgcaaaatgc cgcgtacaag ctgtttcttg cctgacgctt
    15841 gaaagcacaa tgccgtctga aagcctttca gacggcattg cgctttcatg gttaaatcga
    15901 atattcaatc agttcgtttt gagagaagac ataaacctgt ttcggaatca gcttcaattc
    15961 tttgccttcg gcgattgggt aacgcgcggc atcgctgcca gccagcgtga tatgcacgtc
    16021 ttgtttgccg tgtttcacca aaatatgcgt caatgccccg acggcgtgga ctttttcgat
    16081 ttcggcacaa atcatcggtg tttcgtgttc ggcggcgatc tgccattcgt gcgggcggat
    16141 atagccggtg gcggtttgtt cctgccattt gtattgtgcg tccaatttcc acgcgaagcc
    16201 gttataatgc cagaagcctt tttcgatacg tccttcaaaa gcgtcggttt cgccgaggaa
    16261 ctcggtaacg aaggcatttt cgggtttgcg gtaaatagct tcggcgctgc cggtttgttc
    16321 gattttgccg tggttcatca cgacgatttc gtcggaaact tcgagggctt cttcttggtc
    16381 gtgcgtaacc agaatgctgg ttacacccag gttgtgatgg atgtcgcgca gccaggtgcg
    16441 taattctttg cgtactttgg cgtccaacgc gccgaagggt tcgtccaaaa gcaggagttt
    16501 cggttcgacc gcaagcgcac gggcgagggc gatgcgctgg cgttgcccgc cggagagttg
    16561 gtgcggatag gattttgcca aatgcgagag ttgtacgagt ttcagcaatt cttcgacttt
    16621 agtgcagatt tgttctttgg acgggcgttc ggacttgggc aatacggtca aaccgaaagc
    16681 gacgttgtca aacacgttca tgtggcggaa gagggcgtag tgttggaaca cgaagccgac
    16741 tttgcgctcg cggacgtgtt tggcggttac gtcttgccca tcaaacagaa tcttgccgcc
    16801 gtcggcgttt tccagtccgg cgataatgcg taaaagcgtg gttttgccgc agccggacgg
    16861 gccgagcagg gaaacgagtt tgccggtggg gacgttgagg ttgatgtttt tcagcgcgtg
    16921 aaaattgccg aagtgtttgt ttaagttttg gatggtgata ctcatactgc gttcctttcg
    16981 gcggcggcga gttttttgtc ttgtaatttg gtgatgatgt tctgcaccgc cagcgtcgcc
    17041 agtgccaaaa gtgccaatac gccggagagg gcgaatgcgc cggtgaagtt gtattcgttg
    17101 tagaagattt cgaccaaaag cgggacggtg ttggtttcgc cgcgtatgtg tcccgatacc
    17161 acgctgaccg cgccgaactc gcccatcgcg cgggcgttgg tgaggatgat gccgtagagt
    17221 aacgcccatt tgatgttggg cagggtaacg cgccaaaaca tctgccagcc gcttgcgccg
    17281 agtatcaatg ccgcctgttc ttcgctgtcg ccctgagcct gcatcagcgg gatgatttcg
    17341 cgcgcgacaa aggggaaggt aacgaacagc gtcgccagaa taatgccggg gatggcgaag
    17401 ataatctgta tgccttgcgc ttcgagccag ccacccaatg ccgtgtgcgc gccgaacaat
    17461 aagacgaaca ttaaaccggc caccacgggc gatacggaaa acggcaaatc gagcagggta
    17521 gtcagcaact gcttgccgcg aaaatcaaaa cgggtcagca gccacgccat cgccacgccc
    17581 aagacggcat tgacggggac gacaatcagc gcggtaatca gcgtcaattt gatggcagac
    17641 cacgcttcgg gatcgtttaa ggatttcagg tacaaatccc aaccgccttt taaggcttcg
    17701 taaaatacgg cgacgagcgg cacgaccagc atcagcagca gaaagcccag cgcggcggca
    17761 atcagcaaca cgcgcagccg acgcggttcg gtcaggttgg gattggcgga atagggtttc
    17821 atggcggtgg tgttctctgg ttggttttaa aatgtttgga ggtcgtctga aaaactgtgt
    17881 ttttgggagc ggattcgttt tcagacaacc ttttattgat taagggaata aaaacgtcta
    17941 gctaccgtca ttcccgcgca ggcgggaatc caccacaggg caacaggaaa acagaaaata
    18001 aataaggcag ccgaaattca ccaatggatt cccgcctgcg cgggaatgac ggtaacaggt
    18061 atttcagacg acctcaaccc ttcgcgcccg aacgcctgcc caacgcccac tgcatcacgt
    18121 tcagcgcaaa cagaatcaca aacgaaacca gcagcataaa caacgccacc gccgacgcgc
    18181 cctgtacgtc gaactgttcc agcttgcccg taataatcag cggcaggatt tcagaaacca
    18241 tcggaatatt gcccgcgata aaaatcaccg agccgtattc ccccgttgcc cgcgcgaaca
    18301 tcattcccgc gccagtcaag agtgccggcg tgatttccgg cagcagcacg cggcggaacg
    18361 tcgtaaagcg gtttgcgccc aaagtcgccg ccgcttcctc atattcgccc gataattcct
    18421 ccaacaccgg ctgcacggcg cggacgataa agggcaggct gacgacgacc agcgcaatcc
    18481 aaatgccgac gggcgtaaac gcgattttga tgcccaaagg ctcgaaaaaa cggcctatcc
    18541 aaccgttggg cgcatacagg gtcgccaacg cgatacccgt aaccgccgtc ggcagcgcaa
    18601 acggcaaatc gaccagcgcg ttcgccagac ccttgcccgg gaattcataa cgcaccaata
    18661 cccacgccac cagcgtgccg aacacgacat tggtcagcat cgcataaaac gacatccgca
    18721 aactcagcca gacggccgcc aagacattgg gttcggcaat cgtgttccaa aagccgcccc
    18781 agccgatttc cgccgccttc gccgccatca tcgcaaacgg caagaccaca agcagcgaca
    18841 ggcacaatac ggtcagacca aggctgagtt tgaagccggg cagtacgccg ggcgttttga
    18901 gcggtaacat aaaacaatgc tgaaaataag gaaaaggaag gactacttta acgatgccgt
    18961 ccgaaaaacg gaaagaatgg aaagtttggt gcaaagacga atttgttata aagcggttgg
    19021 cagtttctca agcgggcgcg atgttttaa
//
LOCUS       DAWKOX010000020        18936 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.020, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000020 DAWKOX010000000
VERSION     DAWKOX010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18936
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.020"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(269..481)
                     /locus_tag="WJK78_000499"
     CDS             complement(269..481)
                     /locus_tag="WJK78_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7597461.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWTEKTNAV"
     gene            complement(493..774)
                     /locus_tag="WJK78_000500"
     CDS             complement(493..774)
                     /locus_tag="WJK78_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597462.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDSEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(821..1084)
                     /locus_tag="WJK78_000501"
     CDS             complement(821..1084)
                     /locus_tag="WJK78_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597463.1"
                     /translation="MADILPSDKRRQPPKTKGSTMNIIEQEMKHSSLRKVDAEIAKII
                     ADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA"
     gene            complement(1104..1676)
                     /locus_tag="WJK78_000502"
     CDS             complement(1104..1676)
                     /locus_tag="WJK78_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEZ7597464.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            1655..1966
                     /locus_tag="WJK78_000503"
     CDS             1655..1966
                     /locus_tag="WJK78_000503"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597465.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSGLSSVLPASLRRLRVGLTLTASSLRYSVARLMPNSCACCLRYAERAPRSIAS
                     A"
     gene            complement(1988..2863)
                     /locus_tag="WJK78_000504"
     CDS             complement(1988..2863)
                     /locus_tag="WJK78_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HEZ7597466.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHGISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2908..3198)
                     /locus_tag="WJK78_000505"
     CDS             complement(2908..3198)
                     /locus_tag="WJK78_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ7597467.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3210..3389)
                     /locus_tag="WJK78_000506"
     CDS             complement(3210..3389)
                     /locus_tag="WJK78_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001510316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ7597468.1"
                     /translation="MYGYTVEKLKENFAQNGQTLAQWARENGFKPRDVYLVVGGQRKG
                     NYGKGHEIAKKLGLK"
     gene            3503..3880
                     /locus_tag="WJK78_000507"
     CDS             3503..3880
                     /locus_tag="WJK78_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7597469.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            3909..4154
                     /locus_tag="WJK78_000508"
     CDS             3909..4154
                     /locus_tag="WJK78_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597470.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
     gene            4388..5356
                     /locus_tag="WJK78_000509"
     CDS             4388..5356
                     /locus_tag="WJK78_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597471.1"
                     /translation="MAKKTTKTIHYLRAQQNHSLFDLEVALRRVLSAAPTVQDTQIEQ
                     YNQLTQIMHRTLDPKDVKGNSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPP
                     SGYSFLRKEAFLYIVGHHVIFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFK
                     AVGNCDKLSLIQQHGVKSILLDASAYQLSRNRLYQDSRSTIAKALGKVGSVFTSELSD
                     EELEAQSEIHINLEVLLNGNSRASIEAQSLMQEQAEEIIDDETVNQGFSITTQQGEVI
                     QPSDVKLSKSVRIGRYDEANSLLPDSAFTAISEYFLELQSRNLTEQ"
     gene            5353..5835
                     /locus_tag="WJK78_000510"
     CDS             5353..5835
                     /locus_tag="WJK78_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597472.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNLIKSRKEEFKKLMEKKKPKI
                     "
     gene            5925..6428
                     /locus_tag="WJK78_000511"
     CDS             5925..6428
                     /locus_tag="WJK78_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ7597473.1"
                     /translation="MSDKFNQFINRVLSHEGGYANHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAISIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     AAADNAD"
     gene            6537..6869
                     /locus_tag="WJK78_000512"
     CDS             6537..6869
                     /locus_tag="WJK78_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597474.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAAVPQLAEVKKS
                     ANQEGGRQ"
     gene            6866..7276
                     /locus_tag="WJK78_000513"
     CDS             6866..7276
                     /locus_tag="WJK78_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ7597475.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLTAEMAALKKPDALIHGKEVRQKERNSSQG"
     gene            7281..8030
                     /locus_tag="WJK78_000514"
     CDS             7281..8030
                     /locus_tag="WJK78_000514"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ7597476.1"
                     /translation="MPSVELLLEIVGLPRGTFYYQLAVQSAEDKYADLKRHIHDIYRR
                     HKGRYGYRRIAAAIRHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNI
                     LRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQIRPTFDLAGEI
                     LKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQIVRQGEATPYWF
                     KFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
     gene            complement(8347..8709)
                     /gene="ssrA"
                     /locus_tag="WJK78_000515"
     tmRNA           complement(8347..8709)
                     /gene="ssrA"
                     /locus_tag="WJK78_000515"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(8772..9377)
                     /locus_tag="WJK78_000516"
     CDS             complement(8772..9377)
                     /locus_tag="WJK78_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ7597477.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
     gene            complement(9768..9962)
                     /locus_tag="WJK78_000517"
     CDS             complement(9768..9962)
                     /locus_tag="WJK78_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597478.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGALHQRGA"
     gene            complement(9959..11014)
                     /locus_tag="WJK78_000518"
     CDS             complement(9959..11014)
                     /locus_tag="WJK78_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7597479.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKATNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSIVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            complement(11120..11602)
                     /locus_tag="WJK78_000519"
     CDS             complement(11120..11602)
                     /locus_tag="WJK78_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7597480.1"
                     /translation="MSLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            complement(11649..12785)
                     /locus_tag="WJK78_000520"
     CDS             complement(11649..12785)
                     /locus_tag="WJK78_000520"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ7597481.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADRHLCAPFNDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQVVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTLDELKAAFAEHGGVDCVLEKMVDLRSEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQMAQRLADELDYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFQQQVRIMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWLPLQS
                     HPNAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            complement(12782..13327)
                     /locus_tag="WJK78_000521"
     CDS             complement(12782..13327)
                     /locus_tag="WJK78_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEZ7597482.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKSREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTQQTGIRANT
                     QTDFSKFKGCLEDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            complement(13324..14799)
                     /locus_tag="WJK78_000522"
     CDS             complement(13324..14799)
                     /locus_tag="WJK78_000522"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ7597483.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKEGVTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEQEKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGIVADSDPTSEWQETQNKARAVIRAAQMVQEGLDK"
     gene            complement(14910..15275)
                     /locus_tag="WJK78_000523"
     CDS             complement(14910..15275)
                     /locus_tag="WJK78_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597484.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            complement(15296..17206)
                     /locus_tag="WJK78_000524"
     CDS             complement(15296..17206)
                     /locus_tag="WJK78_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7597485.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGKIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENETVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILILDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     IFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            complement(17225..17869)
                     /locus_tag="WJK78_000525"
     CDS             complement(17225..17869)
                     /locus_tag="WJK78_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ7597486.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            complement(18032..18850)
                     /gene="opc"
                     /locus_tag="WJK78_000526"
                     /gene_synonym="opcA"
     CDS             complement(18032..18850)
                     /gene="opc"
                     /locus_tag="WJK78_000526"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HEZ7597487.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWSAKV
                     HADLLSQLGNGWYINPWSEVKFDLKSRYKLNTGVTSLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVPTKSGDVSLTIPKTSIREYGLRVGIKF"
BASE COUNT         4365 a         4276 c         5082 g         5213 t
ORIGIN      
        1 gcgcccgctg ccgcctaaaa ggcagcccgg atgcctgatt atcgggtatc cggggaggat
       61 taagggggta tttgggtaaa attaggaggt atttggggcg aaaacagctg aaaacctgtg
      121 tttgggtttc ggctgtcggg agggaaagga attttgcaaa ggtctcagag tgagtttatt
      181 ttggggcggc ggcaggtcgg gggcaagcgg tgtggggctt ggttgtggtt tttaggtttt
      241 tgggggtaaa aaatgccgtc tgaacttttc agacggcgtt tgttttttct gtccaatcga
      301 ggaactgccg ccatttttcc agcggcatat cggcccgccg cgtttcggta tcgggttcgg
      361 cttcccagcg gcctacctgt atgtagtgct tcaccccgac gatttgcgcc aactcggcct
      421 gtgtcagttt gcagcggttg cgcagggtgc gaaggttgta aggcgtgtag ccgagttcca
      481 tgtcgttgcg gtttattttg tttcgcatat ttttttgact gcccggcggc aggtttcggt
      541 aaggacggcg gcaaatcggg cttcgtctgc cggttttccg tcgaaaaaaa taaaatcgta
      601 aagggtgatg ccgttttcgg aatggcggta atgcccgccc gggcattcgc tgtctgtctg
      661 cctgtggatt ttggcaatca ggcggggata gcggcaatgg gtaatgaaac ggcttgcgcc
      721 gtcttgcccg ataatccatt cggggtagcg gttgaatagt gcggctctgt tcattttgtt
      781 cgggttgttc gggggataaa gcccctcgcg gggcttgtgg tcaggcaaat ttgaatatca
      841 gtgccaacac ggcggcgatg gcggtaacca gcccggtggc cgccatcatg ggataccatc
      901 gggattcttg ggctattttt acggattcgg cgttgatttt gtgcgcgtct gcaatgattt
      961 tggcgatttc ggcatctact tttctcagac tggagtgttt catttcttgt tcgattatgt
     1021 tcatcgtact tcctttcgtt tttggcggtt gccgccgctt gtcggatggt aggatgtctg
     1081 ccatgtgtat atattgatac cttttaggtt ttattgcaag tgttttgggc ggcggcttcg
     1141 tatgcttggc ggtggcggcg gctgtaccat tcggcgagtt cgcgccgctc ttggaggcgg
     1201 tagctgtcgg cggtcaggta gtggtgcagg cttgagaagc cggcgcgttg gagggcggcg
     1261 cggctgatgt ggccgagggc gaggtctgtt gtgagggtgt cttttccggc ggtcaggctg
     1321 atgttggtga agaggtggcg gaatccgtgc attgtgtgtt tggatttgcc gggggtgctg
     1381 ccgtcatagc ccagtcgtcg gatggcgttg tgggcgaatt tgatgctgat gtggtcggga
     1441 tggggggcgg gtttgcgccg tgggcggatg ccggggaaaa ggtggatgtt gtcgccggtc
     1501 tgtgtgtgca gctctcggag tatttctacc gcccagtccg acagtgggac ggtaaagggg
     1561 tgtttggtct tcatgtcggc ggcggggatg tgccataacc gggcggtgag gtcgatgtct
     1621 tgccagcggg cggaaagcag tgcggaggga cgggatgact tccccggttt ccccatcaat
     1681 ccgcgccgcc tcgatttttc cgttggcgcg cagcatttcc accgcctgcc gcaccgacat
     1741 caaccgcttg ccgttgcgcc tcatcgcctc caccaaaacc gccgaaatca atttggcttc
     1801 ttccggttta agctccgtct tgcccgcatc gctgcgccgt ttgcgcgtcg gcttgacgct
     1861 gaccgcctcc agcttgcggt atagcgtggc aaggctgatg cccaattcct gcgcctgctg
     1921 cttaagatat gcagagcgtg ctccgcgttc cattgcttcc gcctgattct cgactgcctt
     1981 aagacgctca atcattgccg gattcatcgc cttctcccgt ttcaccgccc aaccattccg
     2041 gcacattgtc tgtcggtgct tcagtcggca gggcatagct ttcgcgcagt tgctcgcagt
     2101 ccaaaataat ttgattgagc gtgccgacca tctttgcctg atggctgatc ccgtgtgcct
     2161 cactgtgcgc attaagttgg tcgaacaaat ctttcagacg gctcacttga ctgcggatac
     2221 cgacctcaag gcttgttaac tgcatcgcca actcgctgcc tacgtcttcc gccttcggct
     2281 ctctgacaac ggtttgcttc ttagccagct tctcggccag ctcatcaatt ttggctgttt
     2341 tggttttcat cacttcgtct ttggcggcga ggttttcgcg gctttcgcgc agggcgacgc
     2401 gcagctcgcg caccgtcatt cggtccacat cgtcaaaggt catgccgttg acttcttccc
     2461 cttcggccaa acccaccagc gtaacgtctt cttcgaccaa gagttccagc agcttcgact
     2521 tgcccaaatc catcagcttc ggcgcggctt tctgcatttg cggggtcgca aagcggcgag
     2581 tggctgacat cagacgtgat gtttctgcga tacccagccc aaattggctt ttcacaattt
     2641 ccataaaccg tccgtgttcc gtatgctctt ttaaaataat cagcgcacgt cccagttcga
     2701 acatgccttc catcgtctgc cgtactgctt gacgaccgcg ttcaacccaa cgctcttcgc
     2761 tataagtctc gccgttaccc cactgctcca tcaccagcac actgcgcatc gctgcctgat
     2821 tgcttacttt gtcggttgcg ataatttcaa tttctgtatt cattttttat ctccaaagtt
     2881 tccgacgtcg gaaactttca aaatccgtta atccacatcg acccgcttgc cgatttcggc
     2941 aatcttgctt tgcagccgtt catgctgctg cctgaaccgc tctgcgattt gcagggtttt
     3001 gatgccgtag gcgtagttgc cgttttcaag tttgatgacc aatcccgagg caaccaaatc
     3061 atcaatatcc ctgctgactt gcgatggcgt cagccccagt ccgaccgata aatccttatt
     3121 gctcagaccg ataatcggat gctcgtcaag cgcgataaag accctcaata gccgttgtac
     3181 ccttttactt tctgccatcc gcatcctcct tatttcagtc ccagcttctt ggcaatttca
     3241 tgccccttgc cgtaattgcc tttgcgctgt ccgccgacca ccagatacac atcgcgcggc
     3301 ttaaagccgt tctctcttgc ccactgcgcc agcgtttggc cgttttgggc aaaattttct
     3361 tttagttttt caacagtata gccatagata gccctttccc attgtgataa aatagtgaac
     3421 tatttatgca ctagaaatta attagtgcat taccaatgcg tgaattatga gattttaaaa
     3481 tctcttttac aaggattatt ttgtgatttc taaatctctt tttggtaatc gtttgaaaga
     3541 aaaaagaaag tttttagggc ttacccaagc acaagctgct gaaaaagcag gtattgagcg
     3601 cgaaacatgg ggcaaatacg aacgtggcgt atttatgcct agtggagatg tattgctctc
     3661 ttttttgaat atgggaatag atgtgagcag cttatttgct gctgaacagg gaattaggcc
     3721 gtctgaaaat tctgaaatta gtaaggaaga gtcagagtta ttagggtatt accgccaagc
     3781 cagcgataac ggcaaatttg tcattctcag tgtggcaaaa ggcgcagaga aaaaagcagc
     3841 cgaaaatact caagtttcag ccacgcataa aacagcgtga tttttaaatc caaaatggag
     3901 acagtcttat gtttgacttt gaacaacaaa tcaaatgggg tgagcgagcg gaagaaatcg
     3961 ttaaagaggc agccacccag aacaatatcg aaattcccga acctttggct tcggcattag
     4021 ctaaggcggt aaaagtgcat tatctaagcc aagctggtgt gttttctttg gtagaagcct
     4081 atgcagacac ggtaaatcca actgaaaaag aagtagatta ccaagcaatc ggcaaagagc
     4141 tatttgaaaa ataaaaaatg ccgtctgaaa ttttcagacg gcatttagga cactccgaca
     4201 gtcgggctgc tccggtgttc tgaaacggat attaagcaat tgaagcggcc gtgcatttta
     4261 aaacgcatta aaaactaccc cgacatacag gtcatcgggc aggtggttca ggtgttgaaa
     4321 gatttgaatt gatgccgtct gaatttattt tttcgacaca gatattaaaa gagaaaggac
     4381 tgtacaaatg gcaaaaaaaa ctactaaaac tattcattat ttacgtgcgc agcaaaacca
     4441 tagcttgttc gatttagagg tagcattaag aagggttttg tcagctgctc ctactgttca
     4501 agatacacaa attgaacaat acaatcagct tacccaaatc atgcatagaa ctttggatcc
     4561 taaagatgta aaaggcaatt caattggtgg attactgata cacattggca gcggtacaaa
     4621 agatgaacat atccgcacta tgagcaatag acctgtacag caagatgatc atggtggaac
     4681 acaagctcct ccaagtggat attccttttt gcgtaaagag gcttttttgt atattgttgg
     4741 acaccatgta attttttgcg gacatggttt tttgtcagca tcaacggttg cttcttattt
     4801 aagtttactt agcaataaat tgagagagaa caatccggat attgttcaat ttaatattga
     4861 attcaaagca gtaggcaatt gcgacaagtt gtcattgata caacaacatg gggtaaaaag
     4921 tattctttta gatgcttcgg catatcaatt atccagaaac agactgtatc aagatagccg
     4981 ttcaaccatt gctaaagcat tagggaaagt tggtagtgta tttacaagcg aattgagtga
     5041 tgaggaattg gaagcacaat ccgaaattca tatcaattta gaagtcttgc taaacggtaa
     5101 ttcgagagcc agtattgaag cgcaatcgct gatgcaggag caggcagagg aaattattga
     5161 tgatgaaacg gttaatcaag gattttccat taccacgcaa caaggtgaag tgattcagcc
     5221 ctctgatgta aaactgtcta aatctgttag aataggacga tacgatgaag ccaactcgtt
     5281 actccctgac tcggcattta cagcaatcag tgaatatttc ctagaactcc aaagcagaaa
     5341 cttaactgaa caatgaaaaa atatctgccc ttactacgtt ttttgttgat tgcttgtata
     5401 tcagcatttt tagcatggaa agggcaacct tttgttcatg ggaacgagaa ggccgttgat
     5461 ttaattatta acgtatttgc aatcttagcc ggttttttaa ttgccattat gacattgttt
     5521 agtgatatga ggtttgatga agatgcaaat tggcgacaaa ttcaaattcg tgaaggcgta
     5581 caagaacaac ggtatataaa acattcctta cttttttaca catatcttgc cgtattagtt
     5641 tgtgttttta ttgtcatctt gttggctcat aaagaagaat acaaaaatgg accagccatt
     5701 ttttggcttg aacggagcta tttattttta gcctgtattt ccatttttta ttctgtattc
     5761 ttacctggga atttaattaa aagccgaaaa gaagagttta aaaaattaat ggaaaagaag
     5821 aaacccaaaa tctagaacga gttttaaccc cctttaaaat cccattcaga cgaccttttc
     5881 taaaatccct gtattgattt ttaattcaat acagggattt ttccatgtca gacaagttca
     5941 accaattcat caaccgcgtc ctctctcacg agggtggtta cgccaaccat cccaaagacc
     6001 ccggcggcga aaccaattgg ggcatcacta agcgcaccgc acaggcaaac ggctacaacg
     6061 gctccatgcg tgccatgacg cgtgaacagg caatcagcat ttaccgtaaa gcgttttggg
     6121 agcgttaccg cgccgaccaa atgcccgaag cggtcgcttt tcaatttttt gatgcctgcg
     6181 tcaaccacgg ttacggcaat gccgcccgta tgctccaacg cgccgcaggc gtgccggacg
     6241 atggaatcat cggcgaaatc agcctcaaag ccatcaattc ccttcccgaa aacgaccttt
     6301 tattgcggtt caacgccgag cgtctggtct tttataccaa gctgggtacg ttcacctctt
     6361 tcggcaaggg ctgggtacgc cgtgtggcgc aaaacctgat tcacgccgcc gcagacaatg
     6421 ccgattgagg agcaaaccat gtcaaaaaag tccattctcg ccctgatggc cgcagccatg
     6481 cagcccgatt tcagccacag cgacctaggc attcgctacg ccatgccgac tcagggatgt
     6541 tggacgcaag cccaccgcaa gagcggggta gccgccgcga aacgcgcagc caaaaaaaag
     6601 cgtcacaaat aaccgccttt ttccgatggc tgggcggctt ggtctctaat ccggccacag
     6661 ggaaaatcag ccataccaaa ctttgggcaa acgtcgccgc agccgccatg acttggaagt
     6721 tcgtgcaggc ggcggacgcg cccgaatggc tttggtgggc atacggcgcg atggtcggcg
     6781 ggtatgcatt aatcaaacgc ggcatcgccg ccgtaccgca gttggcggaa gtcaaaaaat
     6841 ccgcaaatca ggaagggggg cggcaatgat tgaatttgtc cgagccaaaa aacggctgct
     6901 ttgggcattt gtgcttttgc ttgtgtggac gtgcggttac cgatacgccg ccgacaaggc
     6961 cgaagcggaa caaaccgccc tgattgccac ctatcggcat tcttctatgg ttgcggcgga
     7021 acaatatgcc ttgcagctta aaaaagcgca ggacgaaagg cagcggtggt acgacttttc
     7081 ccaaaaacaa ggaagaaagc ccgtgaaaaa acagtatccg ccgcaaacga aaaaagccgg
     7141 ctatctgaaa accaaggaag aactgcttgc ggaattggct tgccttacag cggaaatggc
     7201 tgccctaaaa aagcccgatg ccttaatcca tgggaaagaa gtgcggcaga aagaacgcaa
     7261 ctcgtcgcag ggttaaggca atgccatccg ttgaactgct gttggagatt gtcggactgc
     7321 cacgcggcac cttctattac caattggccg tccaatcggc agaagacaaa tatgccgatt
     7381 tgaaacggca tatccatgat atttatcgac gacataaggg aagatacggc taccggagga
     7441 ttgcggcagc catccgtcac gcaggaacac cggtcaatca caagaaagtc agccgtctga
     7501 tggcgaagac ggggctgaag gcagtgatac ggcggcgcaa ataccgctcg ttcaaaggag
     7561 aagtcggcaa aattgcgccg aatatcctgc gacgctgttt ccatgcagaa aagccgaatg
     7621 agaaatgggt aacggacgtt accgagttca atgtaggcgg agaaaagata tacctttctc
     7681 cgattatgga tttgtttaac ggggaaatcg tcagttaccg tattcaaatc cgcccgactt
     7741 tcgatttggc cggcgagata ctgaaaggtg cgccggagaa accgggatcg tctgaaaagc
     7801 cgatactgca ttcggatcaa ggttggcaat atcagatgtt tttttatagt ggattaaatt
     7861 taaatcagga caaggcgatg aagccgcaga cagtacaaat agtacggcaa ggcgaggcaa
     7921 cgccgtactg gtttaaattt aatccactat acaacaacga tagaatcaag ttgaaattaa
     7981 aagggctgag ccttgttcag tacagaattc agtccctgaa agccgcttga ttaaactgtc
     8041 cgactttttg gggtcagttc ggcttcggca tttttttatc cgtttggggg taacttgttt
     8101 ggaaagctgc aagcttataa ataaaggatt acatttaagt tttgggtaac ctttttaaaa
     8161 aaatgcgtga tgacttttgc atttttaagg cgttttttgg ggtaattcgt gaaaagttac
     8221 cccaaaagtt accccataaa tggcgaaaac tcaagcatac gccagcatcc tgcaacacaa
     8281 aaaagccttg aaactgttga agttcaaggc ttttttgtgt tgcaggatgc tgctgaaaat
     8341 agggtatggt ggaggcgggg ggaatcgaac ccccgtccga aagtcctcta caaagcgttc
     8401 tacatactta gttgtgtcta tttgaaaatc ttatttccat catgccgacc aacaggcctt
     8461 ttggaaacca gttaccttaa gtcttatttc ctgccaagta acccggtagg aaaccagtca
     8521 atgtaagatg acgttgcggt ggctttcgcc acacagccca ttgaccgact gctgcaacgg
     8581 ctagccttaa gcggctaaag cgtaagtttc gtcgtttgcg actatttgaa ttcagtgttt
     8641 tacgggaatc tgagaccccg gtatgcccgc atctgcttcg caaccctcgt cgaaaccaag
     8701 gtcgccccca gaaatggttt gcaaattata cggatattgt gcggtgctgc caagtctgtc
     8761 ggagaaattt gtcagtcttg ctgccttaat ttgcgtttga gcaggatgcg gacgcagccg
     8821 tcgttgcctt cccggggttc ggcgtaggcg agtacgtcgg ggtgttgcat cagccagttt
     8881 cgggtcatat ttttcagaac gggtttgtag cctttggaac ctaatccgct gccgtggatg
     8941 atttcgccgc atacgccgcg tttttgggtg aatgcgatga attcgttgag gactttttgg
     9001 gcttcttcct gtgtgtagcc gtgcaggtcg acatcggtaa cgacgggata gtatccgttt
     9061 ttcaggcgtt ggatgtcgtt ttttccctgt ccgtttttgc tgaagctggc gggcgggtcg
     9121 ttgtatgtgc tgccgatgta gaagtagttt tcttcgtcgg cgcggttgtc tttgggacgg
     9181 actttgatgg gggttttgtc gggcggcgca taatattgct gccggttttt taatggggag
     9241 acttgtccga ctgcttgtga aaaatcgaaa tcctgttctt gtttttgctt gtttttttcg
     9301 gctgcctgtt tttctgccgc ttctttttgg gcttgtttgc ccagttgttt gaggatgttt
     9361 tggaagtcgg tattcatatt ttttcctgtt atttgtccga tggctgtttc gggcggggtt
     9421 ttaatttgcc ggaatgttta ccaatcgggg gaggatgatt ttgttgcctg cgtatgtttt
     9481 ttgaaagtgt gattgtatat caaaaagaaa tgcggcaacc gtcggcagtg ttgattgccg
     9541 gaaatgcgga ccggtcgaac cgatatgccc gaacgcctga taaagtttta aaaacctgcc
     9601 ttgcgaagca ggctgacgtg ttttgccaat cttgaattgc cggaaacgcg aaacacggaa
     9661 atctgatgtt ttataaatgt tccgatacga actgcaaaat attggttttg tttctgacag
     9721 gcaaaagcac tgtttatttg gctgtcaaaa gggatggtta aggaaagtta tgcgcccctt
     9781 tgatgaagcg cgccccagat aaggatggtt gcgccgacgg cttcagacgg cattttggcg
     9841 gcggtgttgg gttttgtatc cggtttgccg ttgtgtcttg tgatgatgat tttgggcgcg
     9901 gtttttctgt tttgatgtgt ggaatgccgt ctgaaaggcg gttcagacgg catagcggtc
     9961 atttttgtgc ggtcaggcgg tcgaatatgc cgccgtcggc gaagtaggtt ttcatgatgt
    10021 tgtcccatcc gccgaatttt tcttcgggag agaatgtgtc taagtctggg aagtcggctt
    10081 tgtgtcttgc caatacttcg gggttgcggg ggcgcaggta gagtgaggcg gcgagttctt
    10141 gcgccggttc gctccaaagg tattcgagat aggcgcgggc ggttttttgc gtgccttttt
    10201 tcgcgacgat gctgttgacg acggcgacgg ggctttcggc ggaaatggtg tagctcggat
    10261 agacgatttc aaactgtcct tgggtcagtt ttttgctgac gtagttggct tcgttttcaa
    10321 aagtaatgag tacgtcgccg atgttgcgtt gtgtgaaggt ggtggtggcg gcgcgtccgc
    10381 cgttttcaaa aacgggggtg tttttgagga tggatgcgac gagtttttgg gcttcctgtt
    10441 cgttgccgtt ggtggctttc agaccgtaac cgtatgcgcc gaggaaggcg tagcgtccgt
    10501 tgcccgaggt tttgggattg gcgatgacga tgttaacgcc gtctttggca aggtcgttcc
    10561 aatcgcggat ctgtttgggg ttgttttttc ggacaaggaa aaccatagtg ctggtgtagg
    10621 gcgcggcgtg gtcggggagg gcttgttgcc agcctttttc taccagtcct tttttttcga
    10681 gcaggtcgat gtcggaggat tggttcatgg ttacgacatc ggcttgaagg ccgttggcta
    10741 cggataatgc ctgtttgctg gagccgccgt gggactgttg gatgctgacg gatgtgccgg
    10801 ggtgttcgga ttggtatgtt ttgataaata aggggttgta ttctttgtaa aaatcccgtg
    10861 ccacatcgta tgaggcgttg agcagggtaa tgttttttcc gtcggattcg gtattggccg
    10921 gggcattttg tccggacgga tgatttgaat cggctgcggg gctgcaggcg gtgagcaggg
    10981 ctgcggtata gagtgccggt gcgtaggttt tcatatgctt gtcctgtcgg ttggtagatg
    11041 gggcaacttt atacggctgt ctgcgcttgt ggaaataatg tttgatttga agattatcag
    11101 ttttggttat aaggacggat cagaggtgtt tccgcatcag ttcgcatttg attttgatgc
    11161 tggggtcaag ctgcaatact gccgaaccga gcgattcgta gcggttgaga aggtaaaacg
    11221 ggacggagtt gagcgatgcg tagagtttca gaaagctcaa accggatttg tgggcgatgg
    11281 tttccgcctg atgaagtagg gcagtgccca gtccgaggtt gtggaacagg gggtggacgt
    11341 aaagtgcatc gagttgtgct tcttggcagt cgatttggaa aaatccctgt atgttgcctt
    11401 tgtattcggc aacccaaagt gctttgtcgg gatcggaaat ggtcggcagg tagctttctg
    11461 tgtttagcaa gccttcccat acttttaggg cgtgttcgtt gtagctgagg atgcaggtgt
    11521 attggacgga gtgcaggtgg actttgaaga tgtctttgca gtcttgcacg gtggcggggc
    11581 gtaacagtgt cagcaggctc atggcggtat gtcggcggct tcagacggca tctgtgccgt
    11641 tggtcggatt atagggactg atgcagtttt tttgcttctt gaaatgcggt gtccgaatcg
    11701 gtggttaaaa cggtaaagtg tcccattttc cgccctttgt gcgcggtttt tttgccgtaa
    11761 aggtgcaggt gtgcattcgg atggctttgc aagggcagcc aatccggttc gccgccgtct
    11821 tcctgccaaa cgtcgcccaa aatatttgcc atacagcaag aactcagtaa tttggtatcg
    11881 gcaggcggca ggttgcacat aatgcgtacc tgctgctgga actggtctgc tgcgcaggca
    11941 tctatcgtat ggtgtccgga attgtgcggg cgcggggcga tttcgttgac gaccaattca
    12001 tgcgtgtcac cgacaacaaa catttctacc gccaatacgc cgacataatc caattcgtcc
    12061 gccaagcgtt gcgccatctg ccgcgcctgt tgctgcacgt cggcactcag tcgcgcgggg
    12121 acgatggaat aagccaagat gccgttttcg tggatgtttt cggcagggtc gaaagtttgc
    12181 acgttgtcat tgttcaaacg gcatacgatt acggaaattt cactgcgcaa atccaccatt
    12241 ttttccaaaa cgcaatccac gccgccgtgt tcggcaaacg cggctttgag ttcatccaat
    12301 gtttttacgc ggatttgacc tttgccgtcg tagcccaacg tagccgtttt caggatgccg
    12361 ggcaaaaatt gcgcgcttgc ttcagtgatg tcttcagcct tacaaaccac ttgatacggc
    12421 gcggtttgca atcccgcttt gcgtatccat gccttttcct gaatgcggtt ttgtgcaatc
    12481 gccacacaat cgccgctagg ggaaacattg gtatgttttg ccaaaaagcg catcgcatcg
    12541 gcattgacgt tttcaaattc agtggtcacc gccgcgcatt ttgccaattc gtccaaagca
    12601 gcttggtcgt taaacggcgc gcacaaatgg cggtcggcaa attctgctgc cggcgcgtcc
    12661 ggatcggggt cgagaacggt tactttgtag cccatggttt tggcggcaac ggtaaacatt
    12721 ctgcctaatt gtccgccgcc gaggatgcca agcatggcgg gcggagaaag agatatgttt
    12781 ttcatgctga ctcttcaaat tgtacaagtt gatagctata actaattctt gacggatgtc
    12841 ttgtatcgct ggaattacca gtttcagaaa tacagaatac tttttccata aatttttctg
    12901 cttttagaaa ttccagtatt ctgttttttt catccttata agcaccgcgg tctgtacccc
    12961 atgcaagaat aatcatatca gcatcttcca aacatccttt aaatttggaa aaatcggttt
    13021 gggtgtttgc cctaattcct gtttgctgtg tagagtaact ggaaaaaata tttaacattt
    13081 tgaagttggt aaaaccgtac atatccaaga aacgtgcaag ttgggtaagg gttttgtcgc
    13141 ttctttcatc atttgcttta cttggattaa ttcctatagc aacagctgag aaatttttag
    13201 gattttctgt gttgccgctc catctaaccg ttaggatttc tcgacttttt tcattatctg
    13261 tatagagacc gtctttggta gtcggtctga gtgtttggcg aagctcataa agtttttcat
    13321 aagtcattta tccaaccctt cctgcaccat ctgcgcggcg cgtataacgg ctcgggcttt
    13381 gttttgtgtt tcctgccatt cggaggtcgg gtcggagtcg gcgacgatac ctgcgccgct
    13441 ttggacgtat agcgtgttgt ttttcaccac ggcggtgcgg atggcgattg ccaaatccat
    13501 gtcgttgttg aagccccata cgccgaccgc gccgccgtag atgccgcgtt tctcctgttc
    13561 gacttcttcg atgatttcca tggcgcggac tttgggtgcg ccggagagtg tgcctgcggg
    13621 gaaggtagcg gcgaggatgt ccatgttggt aacgccctct ttcagacggc cttcgacgtt
    13681 ggaaacgatg tgcatcacat gggagtattt ttcaatcacc attttatcgg ttactttgac
    13741 ttcgcccgtt ttgctgatgc ggccgacgtc gttgcgccct aaatcgatga gcatgacgtg
    13801 ttcggcgatt tctttggcat cgcttaacaa atcttgttcg ttggcaaggt cttcggcggg
    13861 ggttttgccg cgcaggcgcg tgccggcgat ggggcggacg atgacatcgt cgcgttcgcg
    13921 gcggacaagg atttcgggcg aggagccgac gatgtggaaa tcgccgaaat cgtagtaaaa
    13981 gagataaggc gaagggttga gcgtacgcag ggcgcggtag agggcgagcg ggctgtcggt
    14041 aaattccatg ctcatgcgct ggctggggac aacctgcata cagtcgcctg caaagatgta
    14101 gtctttgatt ttgttaacgc aggctttgaa cggctcttcg ccgaattcgc tgacggcttc
    14161 ggtgtgtttg ctgccgagcg aaagcgggat ggcgcaactt tggcgtaact gtgtacggat
    14221 gtcttcgagg cgttcgcggg cgcgttcgta gccgtcgggc tgcgacggat cggcgtaaac
    14281 gacgagatgg attttgccgc tcaaattgtc gatcaccgcc aattcttgcg acagcatcag
    14341 caagatgtcg ggcgtgccga gcgggtcggc tttggtggtg tttttcaggc ggtgggcgaa
    14401 gtgttcaaaa ttgtagatgg tttcgtaacc gaagtagccg accagtccgc cggtaaagcg
    14461 cggcaggctt gggatttcgg gtgttttgaa gcggttgtgg aaggcttcga taaagggcag
    14521 ggggttgccg tcgtgttgct cgacaatttc gccgttttga taaacatcga cgtgtttgcc
    14581 gctggctttg agatagtggc tgcaaggcag gccgataaaa gaatagcggc cgaaacgttc
    14641 gccaccgaca acggattcga gcaggtaggt ataggggcgg ttggcgagtt tgagatagag
    14701 ggaaagcggc gtatccaaat cggcaaggag ttcttgcacg agcgggatgc ggttgtagcc
    14761 ttgggcggct tgggcttggt attcttgttt gctgatcatt tctgctttcc caaagggcgg
    14821 tttcggacgg cgcggcaacg ggcgcgagta tagcatttta tcggaattgt tgacagtctg
    14881 accggagatg ccgtctgaaa aggacgggct tacggctttg ttttgcgctg ccggtattgt
    14941 ttccatttaa acagataacc tgcggttacg ggaatcaggg ctaagatggt tttgaacgtc
    15001 catgatgcat accaaggtaa agaaccgggt gcgaccgatt gattcagata cggccaccaa
    15061 caggcagtca ggcagccgag cagcagcggc cagatatgcc ggctgaggtt tttttgccaa
    15121 aggaggaatg atgcggcaga ccaaagcagg gtaagggcag tgatttttaa cacggtataa
    15181 gcatccgctc caaacagggc ggcgagaaaa tacgtaccgg caatccagag gacggcaagt
    15241 atcaggacaa tgatttcttc aggtcgtttg aacatttttt tcttcctgtt tgatttcaga
    15301 cggcattgcc gttctgtttg gtttccagca gctcccagcg ttccagcttt tccaaaagca
    15361 gcatttcgat ttcttcggcg cggctttgca gtgcgccggc tttttcgtaa tctttgaaga
    15421 tttcgggatc ggaaagctgc gcgttgattt ctgcctgttc ggcttccaag gcggcgattt
    15481 cgtcgggcag ggcgtcgagt tcgcgctgtt ctttgtagga cagtttgacc gtgcggttgg
    15541 ctttgggttt ttctttcacc ggttcggcat cggctgtttt gggtgcggat tccgtctgaa
    15601 tcttcgcttc gcgtgatttt gcgtcgatgt agtcctgata gccgccgata tattctttta
    15661 accttccatt tccttcaaaa ataatgcttt gggtaatcac gttatcgagg aacatacggt
    15721 cgtgtgagac aaggaatacc gtgccttgat aatcgcgcag caaatcttca agcagctctt
    15781 gggtatcgat atccaagtcg ttggtcggtt cgtccaaaat caaaatatta gcaggacggg
    15841 taaagagttt tgccagcaaa aggcggttgc gttcgccgcc agagagtgaa gaaacaggac
    15901 tttgcgcgcg ggcagggggg aacaggaaat cttctaaata gctcatcaca tgctttttct
    15961 taccgccgac ttcaacgtaa tcattgccct gtccgagcgt gtaaaacacg gtttcgtttt
    16021 cattcaacgc gctgcggaac tggtcgaaat aggcgacttc ctgcttgctg ccgatacgga
    16081 ttctgccgta ggtcggctgc aattcgccca aaatcagctt gaggaaggtg gttttgccga
    16141 taccgtttgg gccgattaag ccgattttgt cgccacgctg caagatggcg gagaatttgt
    16201 ccataatgac tttgccgcca taggcaaacg aagcgtgttc caattcggcg atgattttgc
    16261 cgcttttctc accgctatcg agcttaaagt tgacctgtcc ctgcacgttg cggcgttctg
    16321 cacgttggcg gcgcagctct tccaaacggc gcacgcgtcc ttcgttacgg gtacgtcgcg
    16381 cttcgatgcc tttgcgtatc cacgcttctt cctgagcatg aaatttgtca aacaagcggt
    16441 tatgttccgc ctcgactgcc aactcttgcg cttttttctc actgtattta gagaacgagc
    16501 cgggatagga acgtagaatg ccgcggtcaa gttcgacaat ccgcgtagcg atattatcca
    16561 aaaaacggcg gtcgtgggta atcacgacca agctgccttc aaacgccttg agcaggtttt
    16621 ccaaccagat aatcgcgtca atatccaaat ggttggtcgg ttcgtccagc agcaatacgt
    16681 cgggcttctg cacccaagcc tgcgccaagg cgacacgctt tttctgaccg ccggaaaggt
    16741 tgccgatttt ttcgttttcc ggcaaaccga gttcgcccaa agtctgcttg actgccgcat
    16801 ccagcttcca gccgtccttc gcttcgattt caagttgtaa ttcgttgagt tctttcaaca
    16861 aagcctcacc cgaaccgttt tccaactcat gaccgacgcg gtggtaacgg cgcaataaat
    16921 cgcgaatttt acccaaacct tcggcaacgg tatcaaatac ggttgcgtcc ttatcaaaaa
    16981 aggattcctg cggtacataa acgattttga ggttgttttg aacaataatc tgcccgtcgt
    17041 cgagcttttg cacgccggcg aggattttta aaaacgaaga cttgcctgcg ccgttgcgtc
    17101 cgatcaagcc gactttttcg ccgctgtcga gttgaaaaga agttttgtcg agcaaggcaa
    17161 cgtggccgat ggcaaaagaa gcgttttcta cagataatat attcatgata caaattctca
    17221 acagttaccg tttggatttt accgcaagtt tggcgcgggc aatttcaacc gcacccggca
    17281 ggacggaaac aataatgatg ccgcccatca ccaagcccag attgtttttt acgacgggga
    17341 agttggcaaa gaaatagccc gcgtaagaaa acaggataac ccacaacaag ccaccgatga
    17401 tgttgtagcg gataaatttg gcatagtgca ttttccccat accggcgaca aagggggcga
    17461 aggtgcggac gatgggcacg aagcgcgcga tgataatcgt tttgccgccg tgtttttcgt
    17521 aaaaacggtg ggttttatcg agatattcgc gtcggaagat tttagaatcg ggattggcga
    17581 acagcctgcc gccgaaatat ttgccgacgg taaaattgag cgcgtcgccg agtatggcgg
    17641 caaggcttaa taatgcaacc atcaaatgaa tatccatacc gcccagcgcg gcaataccgc
    17701 cggccgcaaa cagcagcgaa tcgccgggca gtaagggcgt aacaatcagg ccggtttcgc
    17761 aaaaaacaat caaaaacaga atcgcataaa tccacacacc gtattgcgcc gacagcgcga
    17821 gcaggtgttg gtcgatatgg aggatgaagt cgatggcgga ggcaagcacg gcgcgttcct
    17881 aaaaaaacaa accgcgtatt ttaaccgatt ggaaaaatgc cgtctgaaat tttcagacgg
    17941 catcggctat tcaaattcat ttcacgtaaa aaccgcaaac caaaatagtt tgcggtttgg
    18001 catttaaagc gacaatgatg atttcaaatc atcagaattt tatgccgacg cgcaagccgt
    18061 attcacgaat actggttttc gggatggtga gcgatacgtc gccactcttg gttggtacac
    18121 taaactcgcc ggattctttg taagtacgtt gtttgtagaa cggccccgcc tcgatgctgg
    18181 cggattcgcc cagtttttta ccaatatttg cacccaatcc aaagccccag ccgttggttt
    18241 tttgattgat gtcttttttg agactggtaa cgccggtgtt taatttatag cgggacttga
    18301 ggtcaaattt cacttcagac caagggttga tataccagcc gttacccagt tgggaaagca
    18361 aatccgcgtg aactttggct gaccacgact gacggctgct gtgaagcgta tgcttggtgg
    18421 ttttaatgct gtcttttgaa gattcaaaac ccaagccggc acccacacgg aaatttaaag
    18481 aatcacttaa cgtttgggtg taggtgtagc ctgtgtaaag atcgatacgg ttttcaggaa
    18541 cgccggtggg cagttttaca tttttagtct tacccagctt gttctcatct gtttccaaat
    18601 taataatatt ttttttgctg cgcccgaaac cggcttccaa gcggatgcct tggttggcat
    18661 caaaaggaat atcagcacgt acgccgatgt gtttggcagc tttgtgtttt tctttcagga
    18721 aagcacgagt tgaagaaatg gaagagaggt cggtgtggac ggtaaactca ttagcggttt
    18781 gaagctcttg tgcagcggcg gcagtaccgg tcagggcaat catggcacat gtaaaaactg
    18841 tttttttcat agttaaaatc tccaaaattt ggattgtagt cggatatggt aacataacgt
    18901 aaataatcgt tacgcttaca attatattct taagct
//
LOCUS       DAWKOX010000021        18764 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.021, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000021 DAWKOX010000000
VERSION     DAWKOX010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18764
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.021"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..237)
                     /locus_tag="WJK78_000527"
     CDS             complement(<1..237)
                     /locus_tag="WJK78_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ7597488.1"
                     /translation="MGEVFDLKNGYTPSKSNKEYWENGSIPWFRMEDIRENGRILDNS
                     LKHISKSAVKGGKLFPAKSIMMSTTATIGEHALIK"
     gene            complement(220..309)
                     /locus_tag="WJK78_000528"
                     /pseudo
     CDS             complement(220..309)
                     /locus_tag="WJK78_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503463.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(278..878)
                     /locus_tag="WJK78_000529"
                     /pseudo
     CDS             complement(278..878)
                     /locus_tag="WJK78_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250111.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
     gene            complement(1044..2054)
                     /locus_tag="WJK78_000530"
     CDS             complement(1044..2054)
                     /locus_tag="WJK78_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEZ7597489.1"
                     /translation="MSIILYTANDGTAQFALQEFGGQLWLTQADMAELYQTTKQNISK
                     HIKTILAEQELEEKATVNFQLTVQNENGRKVNRKIAHYSLPMIIAVGYRVRSARGIQF
                     RQWATERLDEYLTKGFAIDDERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYA
                     TSQDYNPKSSESQTFFAAVQNKLHYAASRQTAAELIYSRADSSKDFMGLTTFQGAIPT
                     LNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFSGLYGQ
                     GTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDR
                     TK"
     gene            complement(2051..3595)
                     /locus_tag="WJK78_000531"
     CDS             complement(2051..3595)
                     /locus_tag="WJK78_000531"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEZ7597490.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAVVSNPPYSINWIGSGDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEISETVAKIERLRREIDEV
                     IAEIEA"
     gene            complement(3668..4672)
                     /gene="rfaD"
                     /locus_tag="WJK78_000532"
     CDS             complement(3668..4672)
                     /gene="rfaD"
                     /locus_tag="WJK78_000532"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ7597491.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            complement(4801..5832)
                     /locus_tag="WJK78_000533"
     CDS             complement(4801..5832)
                     /locus_tag="WJK78_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ7597492.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPFIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEILLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKN"
     gene            complement(5834..7069)
                     /gene="dcm"
                     /locus_tag="WJK78_000534"
     CDS             complement(5834..7069)
                     /gene="dcm"
                     /locus_tag="WJK78_000534"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7597493.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(7106..8077)
                     /gene="hldA"
                     /locus_tag="WJK78_000535"
     CDS             complement(7106..8077)
                     /gene="hldA"
                     /locus_tag="WJK78_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ7597494.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(8132..8872)
                     /gene="pyrF"
                     /locus_tag="WJK78_000536"
     CDS             complement(8132..8872)
                     /gene="pyrF"
                     /locus_tag="WJK78_000536"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ7597495.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAASTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(9398..10045)
                     /gene="adk"
                     /locus_tag="WJK78_000537"
     CDS             complement(9398..10045)
                     /gene="adk"
                     /locus_tag="WJK78_000537"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ7597496.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            10260..11099
                     /gene="htpX"
                     /locus_tag="WJK78_000538"
     CDS             10260..11099
                     /gene="htpX"
                     /locus_tag="WJK78_000538"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ7597497.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGAGSLLAYSAVVG
                     FSGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(11400..11960)
                     /locus_tag="WJK78_000539"
     CDS             complement(11400..11960)
                     /locus_tag="WJK78_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597498.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(12074..12466)
                     /locus_tag="WJK78_000540"
     CDS             complement(12074..12466)
                     /locus_tag="WJK78_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7597499.1"
                     /translation="MGKRMTFDTAKSRFQEKFPHLELLEFSGIYKPSSVRCPTHGVVQ
                     LLYYDTAIKSKYGCPECGKLKMKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALN
                     TPYGSIRTKLDGRSNPDNLVCNRYKVLL"
     gene            complement(12674..13066)
                     /locus_tag="WJK78_000541"
     CDS             complement(12674..13066)
                     /locus_tag="WJK78_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7597500.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(13183..13593)
                     /locus_tag="WJK78_000542"
     CDS             complement(13183..13593)
                     /locus_tag="WJK78_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7597501.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(13607..14044)
                     /locus_tag="WJK78_000543"
     CDS             complement(13607..14044)
                     /locus_tag="WJK78_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7597502.1"
                     /translation="MKISIFWLYNAFILKRSIMPKSLSLQDVQLRFSSKFPDKTVLKF
                     TKNYEPVTIQCPLHGSVVYGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGE
                     IYEFASTLAASKFIGCSNSTLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(14463..15761)
                     /locus_tag="WJK78_000544"
     CDS             complement(14463..15761)
                     /locus_tag="WJK78_000544"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ7597503.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDVVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAASLKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVEACKPIYETMPGWRESTFGVKDYGA
                     LPENAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(15865..17016)
                     /locus_tag="WJK78_000545"
     CDS             complement(15865..17016)
                     /locus_tag="WJK78_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ7597504.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTETVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTIERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            17351..18730
                     /gene="norM"
                     /locus_tag="WJK78_000546"
     CDS             17351..18730
                     /gene="norM"
                     /locus_tag="WJK78_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ7597505.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
BASE COUNT         4370 a         4577 c         4571 g         5246 t
ORIGIN      
        1 ttttattaac gcatgctctc ctatggttgc cgttgtcgac atcattattg atttagcagg
       61 aaacagcttg ccgcccttaa ctgcgctttt tgatatatgc ttcaatgaat tatctaaaat
      121 acggccattt tccctaatat cttccattct aaaccaaggg attgagccat tttcccaata
      181 ttctttattt gatttggaag gggtatagcc attcttcaag tcaaacacct cccccaacgt
      241 cttccaaacc acatctttca gacggccttt atagccatca gctatccccc cccccgattt
      301 gattgtcaaa atctaaaaga aagtcgcggt aataccggta ttggcgtttg cgcagggcta
      361 attcagcttc cagctcggtg aatttgtcaa gtatttttac aatttttttg ttgggtttcc
      421 aggggtggga tagggattaa taattttttc aagttactgg catttagagc aggaatacct
      481 gtaaatgtac ataaggcatg aatctcttgt tcaaattcaa gtaatatatg atagagaaaa
      541 cgaacatcca attctgttct attcttaata gtaactgcat aatttaagtt gccacgaaaa
      601 tatcttcctt cttgccacgt tattgagccg actcccgctc ctcttgttgt gatgccgata
      661 gggtcatttt cagtgttcca ttcatcaata tagccaagcg gctctttgcc actgttaata
      721 actggataac taccaatatt atttgagatt ttctgcttac ttacagcttg tcctgttttt
      781 atgatagcta tcccattttc tccacccaac ggcttccact ccaccggtgc cgtctgaatc
      841 atctcaatca attttttcgc tttgctttgc atatccatgg ttgttttccg tttctttccc
      901 gctgtggcgg gatgtggggc ggttgtgggg tgcttcggct cactctgtcc gtttgccgtt
      961 atttctgcgg gctgaagtcc gtcctgcttt caggctgcct gcaatggtgt gcaggctgct
     1021 ttttcaggta gcctgaatgg tagttatttt gtgcggtctt ttttctgttt gatctgttgc
     1081 acggctgttt tttccaacgc tttaacgctt tccagatagg cttgctccac cggcgacagg
     1141 atgcgcgctt cataggcgcg gtattcgcgt tcggctttct gctctgcctg tttgcggctg
     1201 atgctgcctg caccctgtaa tgtgccttgt ccgtacagcc cggaaaattt gtccaattcg
     1261 gctatccagt cgcgcatata catggggctt tgctcctgcg ctttgatttc cgctaggtcg
     1321 aagaaggcgg aaaccagacg gttcaggcgg aacagttcgt cttcggtcag atagtttttg
     1381 gcgattttgg cttcattcag cgtggggatt gcgccttgaa aggtggtcag ccccataaag
     1441 tctttgctgc tgtcggcacg gctgtatatc agctcagctg cggtttgccg gctggcggca
     1501 tagtgcagtt tgttttgaac ggcggcaaaa aaggtttggc tttcgctgct tttggggttg
     1561 tagtcttggc tggtggcata taaatcaagc acttgccggt atagggcttt ttcgctgctg
     1621 cggatgtcgc gaatgcggtt gagcagttct ttccaatagt cgccgccgcc tgtgcctttc
     1681 aggcgttcgt cgtctatggc aaagcctttg gtcagatatt cgtccagccg ttcggttgcc
     1741 cattggcgga attggatgcc ccgcgcggaa cggacgcggt agccgacggc aataatcatg
     1801 ggcagggaat aatgggcgat tttgcggttt accttgcgcc cgttttcatt ttgaactgtc
     1861 aactggaagt tgacagttgc cttctcttcc aattcttgct ctgcaagaat ggttttaatg
     1921 tgtttgctga tattttgttt ggtggtttgg tacagttctg ccatgtccgc ctgcgtcagc
     1981 caaagctgtc cgccaaattc ctgcaaggca aattgggcag tgccgtcgtt ggcggtgtat
     2041 aggatgatgc tcatgcttca atctctgcaa tcacttcgtc aatttcacgc cgcagccgtt
     2101 cgattttggc aacggtttcg ctgatttcgg cgttaagctg tttgatgtcg ataatttcgc
     2161 gggtgtcttc gggttcaaca tagctgctga cggcgaggtt gtagccgttg tctttgacgg
     2221 tttgctgggc ggcgttttgg gcgatatgcg gcacatcggc tttatcggcg aagagtttga
     2281 cgatttcggc aatgtgttct tcggttaaga cgttgttgtt ggtttctttt ttaaagaagc
     2341 cgcctgcgtc gatgaattgg atgtcggtat tgtctttgtg tttggacaaa accagtatat
     2401 tgacggcgat gccggtgccg taaaagagat tgggcgcaag ggcgatgacg gtttccacgt
     2461 agttgccctc caccagatat tggcggattt tctgctctgc gccgccgcga tagaaaatgc
     2521 cggggaatga gacgatggcg gcgcggcctc tgccggaaag gtagttcagt gcgtgcagaa
     2581 tgaaggcaaa atcggctttg gatttcgggg cgagtacgcc tgcaggggca aagcggtcgt
     2641 cgttgattaa ggtggggtcg ccgctgccta tccagttgat ggaatagggc ggattggaaa
     2701 cgacggcatc aaagggtttg ctgtctttga gtttgggatt ggtcagtgtg tcgcccaatt
     2761 cgatgtggaa tttgttgtaa ttgacgttgt gcagaaacat attcatgcgg gcgaggttgt
     2821 aggtggtgtg gttgatttcc tgcccgaaga agccttcttc gatgatgtgc tcgtcaaact
     2881 gttttttcgc ctgcaagagc aggctgcccg agccgcaagc tgggtcgtag attttgttta
     2941 ctttctcctg cccgtgcacc gccagccgcg caatcagctt ggatacgctt tgcggggtga
     3001 aaaattcgcc gccggatttg cctgcgttgg cagcgtagtt ggaaatcagg tattcgtagg
     3061 catcgccgaa aaggtcgatg tggtggtctt caaaactgcc gaaatcgagt tccgccacgc
     3121 cttttaggac ggcggcaagg cgtttgttct tgtcggcaac ggtgctgccg agccggctgc
     3181 tggtggtgtc gaagtcgtca aacaggcctt taatgtcttg ttcggacgga tagccggagg
     3241 cggagctttc aatcgcggta aaaatttctt tcagcttggt gttgagctct tcgttttgat
     3301 gggcttcggc ggcaatattg caaaaaagct ggccggggta gatgaaatag cctttgactt
     3361 tgacggcatc gtctttgatt tcgggcgtga tgatgctgtc cggcatagcg gcgtaatcaa
     3421 tactgctgtc gcctgcctgc atatagtcgg taaagttttc gctgataaag cggtagaaaa
     3481 gtgtgccgag aacgtattgt ttaaagtccc agccgtccac cgcgccgcgt acttcgtcgg
     3541 caattttcca aatttggcgg tgcagttggg cgcgttgttg catttcggtc atcatcgaaa
     3601 tccatataaa agttaaacaa atcgaaatcg cctgatattt tcagacgatt ttttacgggc
     3661 attcaaatta agccaaattt tccagcatcc atttgacgta gcgctcgacg cctgatttga
     3721 catcgaaaaa ttcttccgta taacctgcct cacgcaattt ggtgatgtcg gcttgagtga
     3781 agctttggta tttgcctttg agcgcatcgg gaaatgggat gtagcggata agttcttctt
     3841 ctaccagctc tttcaagctc atttcgggtt tgccttcggc ggcgcggcag gcgttgacgg
     3901 tggcggcggc gagttcgttg aactgttggc tgcggccggt gccgaggttg tagatgccgg
     3961 aaagttcggg atggtcgaag aagtagaggt tgactttggc aacgtcttcg acgctgacaa
     4021 agtcgcgggt ttgttcgccg ttgccgtagc cgtcgttgct gccgaacagg ttgacgtaac
     4081 cgtgttcgcg gtattggtgg aaatggtgga aggcgacgga tgccatacgg cctttgtgtt
     4141 gttcgtgttg tccgtacacg ttgaagtagc ggaagccgac gacttgggcg gtcaagcctt
     4201 ctttcatgcg gcggcgcaat acttggtcaa acaggaattt ggaatagccg tacacattga
     4261 gcggtttttc gagttcgcgc tcttcacgga agatttcgcc tttaccatac acggcggcac
     4321 tggaggcata aaggaaggga atgcgttcgt cctgacacca gtccaacaaa tccagcgtgt
     4381 actggtagtt gttttccatc atatacaaac cgtcgtgatt catggtgtcg gaacacgcgc
     4441 cttgatggaa aacggcttcg atgttttgat aaggtaaaat gtgttccctc acttggcgga
     4501 tgaattcatg tttgtcgaga taatgggcga tttcgcactc ggcaaggttt ttgaattttt
     4561 cgcctttgct caaattatcg acggcaacaa tgtcagtaat accgcgttga ttaagtgctt
     4621 tgacgatgtt gctgccgata aagccggccg cgcctgttac gatgatggtc atattcggtt
     4681 tcctttgttt tgagtaaaat taataaactt agttacaaga aatcatcgat attgtcctga
     4741 aacacaaatt tgcgatgata ttccaaatat ttttctcttc cttcgggata tattctcatc
     4801 ttaatttttt gcatttggat tgatattaag tttttcccat gtgtaacggc ttagtcgagt
     4861 accgcaaatc aaacgaccat catccaagaa agtaatataa ccttgatcga acaaccaatc
     4921 ataagtcggc gttaaagcta acccatttaa ataatctaat gcctctttct catttttctc
     4981 agtaatacaa accatataag gtttaatatg actagccctt aacaaaatct catctgtaat
     5041 taatgtaaat ggacattgcg gcatatgatt tataacatcc ttgcgatatt tctgctgccc
     5101 ttttctactt ttctgtttaa tgatttcttg ctctacgaat tgattaaatt ctgaagccgg
     5161 tatttctaat ttttctcttg ataagagttg cgggtgcacg atagagcgaa attgataatc
     5221 caaaaatatt cggaaataaa ataatggttc tgaatcttct atatctttga caggcaatag
     5281 tttaagaatt gataaataac taattttggg caatacaatc ttacgccaaa ttgaccatat
     5341 atcatcctcc gaacggatat aacccctacg gtaaccttta gaattttcca aatggtctga
     5401 tacatcatgg attgaaaaga aaatattttc tgtaggcaga ttattaatac ttaaaacgta
     5461 atcatcataa aaccttgaaa tatcatgatg atatttctgt tcttgtttgt gatattcaac
     5521 ttttgcatca accaaataac gctgtaaatt tttcttatta aaaaaacaat ttttctgaat
     5581 gaaaggatat tctaccctcc ttccattttt tgtctcagta atcccccaat tttcatactc
     5641 aaaaaatgta cttagttttc gaccactatc atcaatataa ctacctacat atttgcgtgc
     5701 ttccccatta ccaccaaaaa cagataactt gttattcctg tgaataaaac tatcttccgc
     5761 acgtaaattt tgaatactat cgacaataaa atactctatg ttttcaatag taattctttg
     5821 aaaatccggc attttactct ccataaagcg taatatccat ttgttttaat atagcgatta
     5881 atacatcaac aacaatactg tttcccgctt ggcgatacat ttgagtatca ctaactaaaa
     5941 ttttaaaatc atctctaaaa cccattagcc gcaaacattc cctaggtgtt aatttacgaa
     6001 tacgtccacg attatgagta acataattat caaccccggc acgatgcatt ttatgcatag
     6061 tttgcaataa tgggcgagct acaggcaaat cagtttccgt actggtttta aaattttttg
     6121 ttcctcctgc caaaacataa tttttgattt tttcagaaag ataatatttt tcctcaacgt
     6181 tatttacatc aaaaataaag tcatcaaatt cagattcgcg ggctgcctga aaaataaaat
     6241 caccatgcca attaaattgt tgatttgctt tttggcataa ggcaatttct ccattaatct
     6301 gtgtataacg tttttgtcta tttttagaac tggtaacaaa tttcacaccc ttttcacgta
     6361 aaaaatattt gctatcagta tagtcctcca aaaaatcttg catagtatgt tctaattcaa
     6421 tcttttcagg aaactgaaaa ccatttatag gaggggtatg aaagccaaca acaaaaatac
     6481 gctcacgatg ttgaggaatc ccataatcct tactattcat tatttggaaa tataagtcat
     6541 aaccaagtga ataaaaaaca ctttttacaa ctttccaagt ttttccatta tcatgattga
     6601 gcaagccctt tacattttca taaataaata tctttggttg gacttcatcc acaacgcgag
     6661 caaattcata gaataatgtt cctcgtgtat cttctaatcc tgcacgtttg ccaaccatgg
     6721 aaaatgcttg gcaaggactg cctccaacta aaatatcaac ttgatttcta aactttctcg
     6781 catcaaattg agtaatgtcg ttatgccaaa aatcttcatt taatttatag tttccaagat
     6841 aacttttttt aacgtatgga tcaatatctc ctgcaaaaac aatggtatgg tttaaattta
     6901 atcggtggaa tgcctgttca accgcaccaa tcccgctgaa tacggttgct aatctaatat
     6961 gtgaatcagg tttaagaaaa gttttagatt tccaaccttg ttgactggga aagagcaaag
     7021 ttttttgtaa tcgagtatcg tgtgtctgtg ccattgtcga aatagtcata cttatatcgt
     7081 tctgtttatc ttatcaatat gaaaactaca ttgttgattg ccctgacaat gccttgatca
     7141 attcggcaaa cgagcaaacc gccgtaccga gtttcgccac gacaaccccg gccgcagtat
     7201 tggcaaggta catggcttcg ggcatggtgc agcctgccgc caaacccaag cccattccgg
     7261 caatgacggt gtcgcccgca ccggatacgt cgtaaacttc ttgggcgcgg gtgggctggt
     7321 aaatcggttc gccttcgctg aacaaggtca tgccttcttc gcttcgggtc agtaaaacgg
     7381 cggtcaggtc gaggtggcgg cgcaggtttt gcgctttttc ggtcagctcg ctttcgtttt
     7441 tccaactgcc gaccacttct ttcaattcgg cgcggttagg cgtaatcaga gttgcaccga
     7501 catatttttc gtaatcgtcg cctttggggt cgattaagac ggttttgccg gcgtgtttcg
     7561 cccaatcgat catatcggag atatgcgaca ggccgccttt gccgtagtct gaaaaaatga
     7621 ttgcgtcgta ttcgggcaag atttcgcggt atttctgctt gatttgttcc aacacttcgc
     7681 agttgggatg ttcttcaaaa tcaagacgga taagctgctg gttgcgggcg acgacgcgca
     7741 gtttgacggt ggtggcgatt tgtttgtcgc gcatcagata ggaggcgacg ccgtcctgca
     7801 ccatcagcgc atcgagcgcg tcggcggctt cgtcgttgcc ggttacggac aacagccctg
     7861 ccctgccgcc caacgaagcg atgttgcgcg cgacatttgc cgctccgccc gcgcgttggt
     7921 cgattcgtcc gattttcgcc accggcacgg gggcttcggg cgaaatacgg gacacatcgc
     7981 cgaaccaata gcggtcgagc atcacgtcgc cgacaaccag gactttggct tgcgcgaaac
     8041 gggatttgag ggtttcttgt tggaacttgg cggacatatt gcctccgttg tattttttca
     8101 gacggcctca gcctgtaagg ccgtctgaaa atcagtttgc ttcaaggttt gccacgcggt
     8161 tcacttcgcg caatacggct accggatcgg cagcttgggt tacaggacga cccattacca
     8221 aataagtcga agcggcagcc aaggcttcgg ccggtgtcat gatgcggcgc tggtcatcat
     8281 tattgccggc aacgtccaag cggatgccgg gcgtgaccaa gacaaaatct tgtcccaact
     8341 cgcggcgcag cggtgcggct tcttgggcgg aacagaccac gccgtccaag cccgaacttt
     8401 gcgccagttt tgccaagcgg atgacttgtt cttcaggggc ggtgttcaaa ccgatttccg
     8461 ccaaatcgct ttgttccatg ctggtcaaca cggttacgcc gattaagagc ggctttgtac
     8521 cgtatccggc aacggcttct gctgcggctt ccatcatacg gcggccgccc gatgcgtgca
     8581 tatcgaccat ccaaacgccc atatcggcag cgactttgca ggcttgcgcg acggtgtggg
     8641 gaatatcgtg gtatttcaaa tcgaggaaaa gtttgaaacc ttgattgatt aagctttctg
     8701 ccaaattgcg tcccgtcgcg gtaaacagct ctttgccgat tttgatttga cacaatgtcg
     8761 ggtcaaggtt gcggacgaat ccgagcgtgt ctttttcgtt ggaaaaatca agggcgacga
     8821 tgacgggggt gcgttgttgc ggagtttgga agtcggagat taaaggattc atggtgtttt
     8881 cgtttcgggt tttcagacga cctttatcgt ctttttcgca gtatagtgga ttaactttaa
     8941 accggtacgg cgttgtctcg ccttagttca aagagaacgc ttctctaagg tgctgaagca
     9001 caaagtgaat cggttccgta ctgtttgtac tgcctgcggc ttcgtcgcct tgtcctgatt
     9061 tttgttaatc cactataaca acgtaaattc aaaccgtagg tcgggcattg atgtccgacc
     9121 tacgcggact caagcctccg acaaactgtt tcggataaat ttgaaccggt acatcagccg
     9181 tcattcccgc gcaggcggga atccattgat aaaactcagt tcatcagatt taaacagcga
     9241 ttgcccaaat tcagaaatgg attcccgcct gcgcgggaat gacgccaaat gattattttt
     9301 cggttgcaac acgctgttta tcaaaaacag gtcgtctgaa aacctgattt tctgttttca
     9361 gagtgcgaag cctgcccgtg ggtacgacct tttcgattta tttgcccaat gcgcccaata
     9421 cttcggcttt cacggcttct accggctgag tgccgtcaac tttgatgtat ttaggcgcgt
     9481 gttcgccttc cagtttgctg taaaaatcga ccaaaacttc ggtttgctcg tggtaaacgg
     9541 caaggcgttt tttcacggtt tcttctttgt cgtcgtcgcg ctgaatcaaa tcttcgccgg
     9601 ttacgtcgtc tttgccttca actttgggcg ggttgtaggt aacgtggtaa gtacggccgg
     9661 aagccaaatg cacgcggcgg ccgctcatgc ggtcgacaat cacgctgtca ggcacatcga
     9721 tttcaacgac tgcatccaaa tccacgcctg cttcaaccat cgcttcggct tgtgccaatg
     9781 tgcgcgggaa accgtcaaac aggaaaccgt ttttgcagtc gtcttgcgcg atgcgttctt
     9841 tgaccatgcc gataatgatg tcgtcgcgca ccaagccgcc ttcgtcaatg atttttttcg
     9901 cttccaaacc caagggcgtg cctgccttaa tcgcggcacg gagcatgtcg ccggtagaga
     9961 tttgcggaat gccgaacgct gcggtgatga attgcgcctg agtgcctttg cccgcgcccg
    10021 gtgcgcctaa aagtaatgct ttcatgaagt gatcctttta aatgtgttta ttggaatcaa
    10081 acagatggtt tacgattcta cacggcttgg cacaatagtt caaaaaccaa ctgcacaaac
    10141 tgccatttgc aagcaaatgt tttgcatacc tttgccgagc ctgatattca caaggcggca
    10201 actttttggg acaatcccca aaatttcaaa acatcacacc ctaccaaaaa ggaacatccg
    10261 tgaaacgcat ttttctgttt ttggctacca atatcgctgt tttggtcgta atcaacattg
    10321 ttttggcggt tctgggcatc aacagccggg gcggcgcggg cagcctgttg gcgtattccg
    10381 ccgtcgtcgg cttcagcggc tcgattattt cgctgctgat gtccaaattc atcgccaaac
    10441 aatcggtcgg tgcggaagtc atcgacacgc cgcgcaccga agaagaagcc tggcttttga
    10501 acactgtcga agcccaagcg cggcaatgga acctgaaaac gcccgaagtc gccatctacc
    10561 actcccccga acccaatgcc tttgccacgg gcgcatcgag aaacagctcc ctgatcgccg
    10621 tcagcaccgg tttgctcgac catatgacgc gtgacgaagt ggaagccgta ttggcgcacg
    10681 aaatggcaca cgtcggcaac ggcgatatgg ttacgctgac gctgattcaa ggcgtggtca
    10741 atacctttgt cgtgttcctg tcgcgcatta ttgccaacct gattgcccga aacaacgacg
    10801 gcagccagtc ccagggaact tatttcctgg tcagcatggt attccaaatc ctgttcggct
    10861 tccttgccag cttaattgtc atgtggttca gccgacaacg cgaataccgc gccgacgcgg
    10921 gcgcggcaaa actggtcggc gcgccgaaaa tgatttccgc cctgcaaagg cttaaaggca
    10981 acccggtcga tttgcccgaa gaaatgaacg caatgggcat cgccggagat acgcgcgact
    11041 ccctgctcag cacccaccct tcgctggaca accgaatcgc ccgcctcaaa tcgctttaaa
    11101 ccgatttgaa acggcaaaaa ccgtacgcgc aagcagtacg gttttttgta tatgctgtct
    11161 gaaaacatca ggtttccata ccgacaccaa ccgtatccat ttccgcaccg gatacgccgc
    11221 attgatatac cctgataaac cgtatccgga cagaaaatat agtggattaa caaaaaccag
    11281 tacggcgttg cctcgcctta gctcaaagaa aacgattctc taaggtgctg aagcaccaag
    11341 tgaatcggtt ccgtactatt tatactgtct gcggcttcgt cgccttgtcc tgatttttgt
    11401 taatccccta tatcagataa aacagcggta aaattgccgt ctgaaaccaa ctctgcgcca
    11461 tacgggacac gctctgcacg tctatttgcc tccgatatat cctccctact gtaggaacgt
    11521 ctgccgattt gcacgaaatc ggcacctcta gcacccttca ggatggcgga cgttatccgt
    11581 tcttgggatt ctgcaagacg gtcgacggca ttatacagac gctcggtctg atacccttcc
    11641 gaagcaacct gcttcaggta ttccaaataa ccgtaaccca acgcccctcc gacaagcagg
    11701 gtcgtcaacg ctaccagcgt tgccgaacgg attttagggg gcatatcttg aagcatatct
    11761 ctaccgaacc gaaccaaagt ctctttaaag tcggactcta cacgcgtaga accctcggaa
    11821 atcttgaagt tcaactcata ctgcttccgt ttgtccgctg tcaaccgctt gaggttgtca
    11881 tccccgtatt ggacggttga cacaaccctg tacagactgt cctgtatttc gaccagcgtc
    11941 tgtgcaaagt tggcggtcat aactggattc ccaacccttg ccgccgattc tgatactcaa
    12001 aacggtatcc aggcgttcca gcagggcttc gggagacagc agtgcgtatt cttcaatatt
    12061 ttccataggt tgattatagc agaaccttat acctgttaca gacaaggttg tcgggatttg
    12121 aacgtccgtc gagcttggtt cgtatagagc cgtagggggt gtttagggct ttggcggcag
    12181 cttgtacgct ggggaacgtg agtgtttcgc ctgtggcggt gtcgaggatg gagacaggtt
    12241 tttggttttg gggaggcgta ttttccttca ttttaagttt cccgcactcc ggacacccat
    12301 actttgactt tatagctgtg tcgtaataca aaagttggac aaccccgtgc gtaggacatc
    12361 taacactgga aggtttataa atgccactga actccaacaa ttctaaatgt ggaaatttct
    12421 cttgaaagcg tgatttggcg gtatcgaaag tcattcgctt acccataatt tgtctccata
    12481 ggttatgtgc aaatggatta cacaaccaaa atatagaaat tttcaaattt tttgagacct
    12541 acctgaaatc ctgcgcaagc acaatgtaaa gaaaaatggt atacgtcttt actaaatctt
    12601 tacataaatt aactctaatc gggatttgaa cgtccgtcga gcttggttcg taggatttag
    12661 ggggttgtga accttaccta tcgtacccaa gcactttgta cctgtttgaa ataaggttgt
    12721 cgggcgacgt tcgacccttg agcctgtgat tgatttgttg gaaatgtaca cctaaagcag
    12781 cacctgcggc agtaacgctt gggaacgtga gtgtttcgtt ggtcgttgtg tcgaggatga
    12841 ggaggggctt ccctacattt ggaggtgttt gggtttttga catcttagca cactcaggac
    12901 acccgtactt tgactttata agggcattaa atgtcgaata acgaacgttc ccgtgcatag
    12961 gacaattaac ggttactggg taattcacac cgtcaaagcc ggttagagag atattaggga
    13021 atatatcagt aagttcagaa gctgcttggt tgaaagattt ggccatttga gactccaaaa
    13081 ttgattgtca aatggattta atagcaaatt tataaaaatg tcaaattttt cgagaagcac
    13141 ctgatagtgg cgaggggtat acactgttaa aaagtgtata cgtcatttag tgcagatgtg
    13201 aaccttatac ctccctgcaa gtaaagtctc tgtgtgaacc cgacctttta tacggtcagt
    13261 gatagctgct gggtttatac ccaatgacct tgcagcagat gctcttgagg ggaatgtaag
    13321 tgtttcgcca gttacagtat cctccaatac tgtattttta gataatttat ctattgtatc
    13381 ttctggaatt ttgtgggaat tgacaccata agatgcacat tttggacacc cacttttaga
    13441 gtccaacata cttttgaatg tagagcaagt aaccctcccg tgtataggac agacgattac
    13501 cgtcgggtaa cgaacgccat tgaactccac aagattcaaa tgtggaaatt tagaggttag
    13561 cttagaaact gcttgagtaa atgtaagtgc catagtggtt gtgaacttac tttaccaacc
    13621 tataacgata cctaatcaat cggtcaaacg gagtgcgtcc gcttaaacgt acagctaaag
    13681 tgctgttgga gcaaccgata aatttactgg cagccagtgt acttgcaaac tcgtagattt
    13741 cccctgtctc tgtgtcctcc aacctaatgg caacggcgtt tggagagggc ttttcgggat
    13801 ttcgagtaca ttcaggacat cctgttgagg atttcatggc agcttgtaga ttcccgtaaa
    13861 caaccgaccc atgcaaaggg cattggattg ttaccggttc gtagttttta gtgaacttca
    13921 aaaccgtctt atcaggaaat ttactggaaa accttaactg aacatcttgt agcgagagtg
    13981 attttggcat tatagacctt tttaaaatga aagcattata caaccaaaat atagaaattt
    14041 tcaaattttc tctgaacgca ctggtatccg atggagctaa atgtaaagaa aaagggtata
    14101 cgtctttact aaatatttac acattttaac tgtatagtgt ttgacaaaca acaggcatag
    14161 gcgcataatg cacccgtagt tagatagata gatagatagt aaggagataa ccaatgactt
    14221 agcacctgcc ccctctctct cgcgcacccc gcccctcgct tgcggctaat gggctttgcg
    14281 cgacatatac actttcatct cctgcatggc ttaaccgcct atgcaatagt acacacatca
    14341 acaaatcagg ctggcacgtc ttggcattgg ctgacgtacc attgtagccc gaaatgttga
    14401 taccctacta tttatgacca acggcggatt agggcttcag acggcaattt tactgcaaaa
    14461 ccttatgcga acggatgatg cagcacaatc gtttcttctc ggtcggggcc ggtggagacg
    14521 atggcgaccg gcgcgccgca gacttcttca atccgtttca aatatgcttt ggcgttttcg
    14581 ggcaatgcgc cgtagtcctt cacgccgaaa gtggattcac gccagccggg catggtttcg
    14641 taaatcggct tgcaggcttc taccgcatca gagccgcaag gcaggatgtc ggttttgccg
    14701 ccgtcgggca gttcgtagcc gacgcagata ttgatggttt caacgccgtc cattacatcg
    14761 agtttggtaa tgcacatacc ggaaatgccg ttgatttgga tggagcgttt cagggaggcg
    14821 gcatcaaacc agccgcagcg gcgcgcacga ccggttacag aaccgaattc gtgtccgcgc
    14881 tccgccaaac ctgcgcctac ttcgtcgaac aattcggtcg ggaacgggcc cgaaccgacg
    14941 cgcgtggtat aggctttgac gatgcccaaa acataatcca gcatttgagg gcctacgccc
    15001 gcgcctgccg aagccgcgcc ggcgaggcag ttggacgagg taacgaaggg ataagtgccg
    15061 tagtcgatgt ccaacaacgc accttgcgcg ccttcaaaca gcagtttttc gccgtttttg
    15121 tttttctcgt tcaacacgcg ggacacgtcg gtaatcatcg gcgcaatgcg cggcgcgact
    15181 ttttcgataa ccgccatcac gtcttccgct ttaaccggtt cggcattgtg cagatgttgc
    15241 agttggacgt tgtaataagc aaggacgaca tccagttttt cacgcagttt ttcaggatgc
    15301 agcaaatcgg cggcgcgaat ggcgcggcgt gccactttgt cttcgtaggc agggccgatg
    15361 ccgcggccgg tcgtgccgat tttgcctttg ccgcgcgatg cttcgcgggc ttggtcgagc
    15421 gcgatgtgat aaggcaggat cagcgggcag gtcggcgcga ttttcagacg gccttcgacg
    15481 tttttcacgc ctgccgcgtt caactcgtcg atttcgccca acagggcttc gggggagacg
    15541 acaacgcccg aaccgatgaa gcagtccaaa ctttcatgca ggatgccgct cggaatcagg
    15601 cgcaaaatgg tttttttgcc gccgacaacc aaggtatggc ccgcattgtg gccgccttgg
    15661 aagcgcacca cgccgccggc ttcttccgcc agccagtcaa cgattttacc tttaccctcg
    15721 tcgccccact gtgcgccgat tactacaaca tttttagcca tagccatata acctatcgat
    15781 attaaaaatt attgcggaaa tccccaaacc ggtgcggctt tgcgccccgc cacgatttgc
    15841 ctttcatccg ccatgaacgg gtatttagcg tttcacgacc tgccaaacgc cgtccgtctt
    15901 tttcagacgg cctgcaagct cttccgaaac attgtgtccg ataccgtagt caatcacgac
    15961 acactgccct tgttcacgca aggcttcgac tgcttcgcgc gccgcttcgg catcttccgc
    16021 atcgaccaac acggcgggct gccgttcgat ggtgggcaaa cgcccgataa agctgcgcaa
    16081 gtcgaaactg aatcccgttg ccgggcgcgc cctgccgaaa tatccgccca atccgtcata
    16141 acgcccgccg cgcgcgaccg cgtcgtggaa atcggcggca taggcggcat acagcaagcc
    16201 cgtgtggtaa ttgtcgacac gcagctcgga caagtcgata tggatttcac aatcggggaa
    16261 tgcgtcgcac accgcctgca attcgcccaa cgcgccgccg accgccgaca aatccggcaa
    16321 ccgtccgcgc gcgtcggaca acacttcacg cccgccgtac aggcgcggca gcagcgagaa
    16381 tgcttttgcc cacataccgt ccagcttcca agccttgacc tgcgcttcga ccgtctcggt
    16441 atctttatcc tgcatcaagg caagcagcgt tgcagactgc cccgcatcca aatgcgccgc
    16501 atcggacaag gcgcgaaata tgccgatatg ccccagcgaa agcagcactt tgcccatatc
    16561 ggcaattttc atgcttttca gcatcaggtc tatcagctcg atgtcgccac ggatgtcggc
    16621 aaaaccgtac atttccgccc ctgcctgcaa gggttcgcgc atattcagca gaccgtcgga
    16681 ctgcgcgtgc aacaccggac cggcataaca caaccggtta atcccttggt tggcggataa
    16741 aagatgggca tcgatacgcg ccacctgcgg cgtgatgtcg gcgcgtatgc ccaactgcct
    16801 gccgctgagc ctgtccgtta ccaaaatggt tttcagggaa agccccgcat cgatatgcgt
    16861 cagcagggaa tgtgcgtact ccatcagcgg aggctgtacc agttcataac cgtgtacgcg
    16921 gaacagtgcc aacaactgct ccctcgcgct ttcaagctgc cgcgcgttcg tgggcagtac
    16981 gtcggcgata tgttccggaa gctgccatgt ctgcatgaga atctgccttc tattttatca
    17041 tgtaaataca aaaggctgcc cgatccgcaa tcagacggca tctttgccgc aacgcatcac
    17101 gccgctgtca aaacggcgat gcttccttcc gattcagaat ccgaacagcc cctgtccgac
    17161 ggctcaatgc cgtcaagtcg ttaaaaccaa actttaccat aaaatacaca caatctgaat
    17221 atacttttat accctgtatc cgccgtctga cggcacggca tttttttact atataatgtg
    17281 cgccattatt tctcatcact tcctgctgcc gttttctgct tcagacggca tttttgttga
    17341 ttgaacactt atgctgctcg acctcaaccg cttttccttt tccgtcttcc tgaaagaagt
    17401 ccgcctgctg accgctcttg ccctgcccat gctgttggcg caggtcgcgc aggtgggcat
    17461 cggttttgtc gataccgtga tggcgggcgg tgcgggcaag gaagacttgg cggcggtggc
    17521 tttgggcagc agcgcgtttg ccacggttta tattaccttt atgggcatta tggcggcgct
    17581 gaacccgatg attgcccagc tttacggcgc gggtaaaacc gacgaagtgg gcgaaacggg
    17641 acggcagggg atttggttcg ggctgttttt gggcgtgttc ggcatggtct tgatgtgggc
    17701 ggcgattacg ccgttccgca actggctgac cttgagcgat tatgtggaag gcacaatggc
    17761 gcagtatatg ctgttcacca gcttggcgat gccggcggca atggtacacc gcgcactgca
    17821 cgcctacgcc tccagcctga accgcccgcg cctgattatg ttggtcagct ttgcggcgtt
    17881 tgtgttgaac gtgccgctga actatatttt cgtttacggc aaattcggta tgcccgcttt
    17941 gggcggcgca ggctgcggac tggcgacgat ggcggtgttt tggttcagcg cgctggcatt
    18001 gtggatttat atcgccaagg aaaatttctt ccgcccattc ggactgacgg cgaaattcgg
    18061 caaaccggat tgggcggtgt tcaaacagat ttggaaaatc ggcgcaccca tcgggctgtc
    18121 ttattttttg gaagccagcg cgttttcgtt tatcgtgttt ttgattgcgc ctttcggcga
    18181 ggattatgtg gcggcgcagc aggtcggcat cagtttgtcg gggattctct atatgattcc
    18241 gcaaagcgtc ggctcggcgg ggacggtgcg catcggcttt tcgcttgggc ggcgcgaatt
    18301 ttcgcgggcg cgttatattt cgggcgtgtc actggtgtta ggatggatgc tcgccgtgat
    18361 taccgtgctt tccttggtat tattccgttc gccgctggta agtatgtaca acaatgatcc
    18421 ggcggtttta agcatcgccg ccaccgtctt actgttcgcc ggcttgttcc aaccggcaga
    18481 cttcacccaa tgtatcgcct cctacgcctt gcgcggctac aaagttacaa aggtgccgat
    18541 gttcatccac gccgccgcct tttggggctg cggtctgctg ccgggctacc tgctcgccta
    18601 ccgtttcgat atgggcattt acggcttctg gacggcattg attgcctcgc tcaccatcgc
    18661 cgccatcgcc ttggtgtggt gcttggaatt gtgcagtagg gagatggtca gatcgcataa
    18721 ggccgtctga aaactccgcc gattaaaaat atagtggatt aaca
//
LOCUS       DAWKOX010000022        18360 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.022, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000022 DAWKOX010000000
VERSION     DAWKOX010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18360
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.022"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(151..1083)
                     /gene="cysK"
                     /locus_tag="WJK78_000547"
     CDS             complement(151..1083)
                     /gene="cysK"
                     /locus_tag="WJK78_000547"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ7597506.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1277..1882)
                     /locus_tag="WJK78_000548"
     CDS             complement(1277..1882)
                     /locus_tag="WJK78_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597507.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1879..2730)
                     /gene="dapF"
                     /locus_tag="WJK78_000549"
     CDS             complement(1879..2730)
                     /gene="dapF"
                     /locus_tag="WJK78_000549"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ7597508.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFIPEHAPIAAWADRFRGIG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     AKGIIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAQVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            2868..3164
                     /locus_tag="WJK78_000550"
     CDS             2868..3164
                     /locus_tag="WJK78_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597509.1"
                     /translation="MFRILLLLFPCAILVACTRNIPANPTVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3178..3846
                     /locus_tag="WJK78_000551"
     CDS             3178..3846
                     /locus_tag="WJK78_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7597510.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3919..6039)
                     /gene="pnp"
                     /locus_tag="WJK78_000552"
     CDS             complement(3919..6039)
                     /gene="pnp"
                     /locus_tag="WJK78_000552"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ7597511.1"
                     /translation="MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYINGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQAAINA
                     INEFADEVNPEVWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWNA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RVGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6276..7139)
                     /locus_tag="WJK78_000553"
     CDS             complement(6276..7139)
                     /locus_tag="WJK78_000553"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ7597512.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKVLEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRAKAVRLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYEVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7338..8213
                     /gene="rfbD"
                     /locus_tag="WJK78_000554"
     CDS             7338..8213
                     /gene="rfbD"
                     /locus_tag="WJK78_000554"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ7597513.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLLSSGY"
     gene            complement(8928..9161)
                     /locus_tag="WJK78_000555"
     CDS             complement(8928..9161)
                     /locus_tag="WJK78_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ7597514.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(9327..9527)
                     /locus_tag="WJK78_000556"
     CDS             complement(9327..9527)
                     /locus_tag="WJK78_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ7597515.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(9699..10574)
                     /gene="xerD"
                     /locus_tag="WJK78_000557"
     CDS             complement(9699..10574)
                     /gene="xerD"
                     /locus_tag="WJK78_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ7597516.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRT
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTCLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(10626..11066)
                     /locus_tag="WJK78_000558"
     CDS             complement(10626..11066)
                     /locus_tag="WJK78_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ7597517.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            11387..12325
                     /locus_tag="WJK78_000559"
     CDS             11387..12325
                     /locus_tag="WJK78_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ7597518.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            12454..12747
                     /gene="hfq"
                     /locus_tag="WJK78_000560"
     CDS             12454..12747
                     /gene="hfq"
                     /locus_tag="WJK78_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ7597519.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            12832..13398
                     /locus_tag="WJK78_000561"
     CDS             12832..13398
                     /locus_tag="WJK78_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7597520.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLRYGFTNRKNNPPYLLAFEKLRQK"
     gene            13452..13826
                     /locus_tag="WJK78_000562"
     CDS             13452..13826
                     /locus_tag="WJK78_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ7597521.1"
                     /translation="MQYLIVKYSHQIFVTVTILLFNIRFFLLWKNPEKPLAGLWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSVKFYAV
                     YLLAICCVACIVYLAKTKVLPF"
     gene            13836..14330
                     /gene="folK"
                     /locus_tag="WJK78_000563"
     CDS             13836..14330
                     /gene="folK"
                     /locus_tag="WJK78_000563"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ7597522.1"
                     /translation="MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTDMDGISLLSLLNRIEADFGRERSFRNAPRTLDLDII
                     DFDGLSSDDPRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKQLGNQGIRL
                     LPDK"
     gene            complement(14457..14936)
                     /locus_tag="WJK78_000564"
     CDS             complement(14457..14936)
                     /locus_tag="WJK78_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ7597523.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYISLSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAMLQI"
     gene            complement(15156..15893)
                     /gene="ubiE"
                     /locus_tag="WJK78_000565"
     CDS             complement(15156..15893)
                     /gene="ubiE"
                     /locus_tag="WJK78_000565"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ7597524.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(15936..16304)
                     /locus_tag="WJK78_000566"
     CDS             complement(15936..16304)
                     /locus_tag="WJK78_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ7597525.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            16424..18043
                     /gene="mnmC"
                     /locus_tag="WJK78_000567"
     CDS             16424..18043
                     /gene="mnmC"
                     /locus_tag="WJK78_000567"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ7597526.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITPAEAEKIAGIPLNTPYAEPLCGLFWQYGVW
                     LNPPAFVRTLLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSPR
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALSESLFAANPNPQKHQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAIAAQILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(18040..18189)
                     /locus_tag="WJK78_000568"
     CDS             complement(18040..18189)
                     /locus_tag="WJK78_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597527.1"
                     /translation="MDSKGNLLGIPYSLFWEENVMGVFDILPSGLVCLFEYDFLWSGR
                     HAAKA"
BASE COUNT         4703 a         5430 c         3939 g         4288 t
ORIGIN      
        1 aaatatttcc ctcaagcaat gcggcggcac caatgcctga ttaaaacaca accggcgttt
       61 tcggcatata tgcaaaaacg cattttccgg cacggcgtta caccgatacc gaaaaatgcg
      121 tctgaatgtt tcgacaatcc gattaaagca ttatgccaaa tctgcaaaaa gtggcgtaga
      181 gagatagcgt tcgccataag aaggcagcag cacgactatc agcttgcctt cgttttcagg
      241 ctgtttggca agctgcaacg cactccaaac cgccgcaccg gaagaaatac ccaccaaaat
      301 gccttctttt tccgctattg cgcgggcggt ttcaaaagcc gcttcgttcg acactttggt
      361 aatgctgtcg taaattttgg tattcaaaac ggtcggaata aagcctgcgc cgatgccttg
      421 aatcgggtgc gggccttttt cgccgccgct caatacgggt gaagcttcag gctcgacggc
      481 aaccacttta acttcgggtt tgtatttttt caacacttcg cccacgccgg taatcgtacc
      541 gcccgtgccg acgccggcaa cgaagacatc gactttgccg tccgtatccc gccaaatttc
      601 ctcggcggtt gttttgcggt ggacttcggg gtttgcctca ttgtcgaact ggcgcggcat
      661 aaaataagtg tcgggatgcg cgtccaccaa ggatttcgct ttggcaatcg cgcccgccat
      721 accttcggcg gcaggggtca gaatcagctc cgcaccaaac gcgcgcaaca gcattttgcg
      781 ctccttactc atgctttccg gcatggtaat cgccagcttg tagccgcgtg cggcacatac
      841 cattgccaaa ccgacacccg tattgccgct ggttgcttcg acaatgacgg tgtttttgtt
      901 gattttgccc gctttttcgg caccctcgat cattgcttcg gcaatgcggt ctttgacgct
      961 gctgcctgga ttgaaaaatt ccagtttcac ggcaacctcc gccttcaaac cttcggtcag
     1021 acggttcagt ttgaccaaag gcgtgttgcc gattagttcg gtgatgctgt ttgcaatttt
     1081 catcttctgc tcctgaataa taaggtttcg acagtaaggc gcaatcccca taggcatcct
     1141 gtccgattgc aggggatttg cgccgaaaca taaacaaatt tcggatatgg ctttatccta
     1201 aacctatgcc gcctaaaaaa ccaatatcca aaatttcttt ctttataact ttttgttccg
     1261 atacggccgc accgtattat cttccaattt ctgaaagcag cagcaccagt accgagacct
     1321 gcatcaacgc tgccgtcaac ccgccgagtc gcagctgcga gccgccgaac gttgacggcg
     1381 gctgccggtc tataccgcag cggtggacat aggcaaccgc catcagcaca aactgcaaca
     1441 cgaaccaata aaccggcttc agcgcataaa gtttgagcag tgccgcaaac acaaacactt
     1501 gaaccgttcc cgaaaagcaa taatgcacca acgcacatat tccgacaaaa gcaagcgtca
     1561 tcgatacatt actgacggca aaaagcccga gcagcggatg ttcggggtct gcctgccatc
     1621 cgtttccatc cgttttccgg ttccaatgcc cgatgaaaaa aaatatgctg cccaaagtca
     1681 ggtaaaaatg ggggatgaac aagggcgcgg cgcgggtcat tccccatatg ccgggcatca
     1741 gctttgcccc caaaaccgat atgcccagcc acagcataat actcgcccaa aaccattgca
     1801 acattcctgc gcggaatatc agaaacagaa aaaccgccgc atacagtaag gcagacaaaa
     1861 aatccaaatg cagcaaaatc atgaatacgc caactcgcct tcaaacaccg tttccgcagg
     1921 gccggtcatc atcacatcgc cgccgcaggc ccattcgata tataaagttc cgcccggcaa
     1981 aatcacctct accgttttcc cttcatccaa caaccccaga cggatacccg ccaccacagc
     2041 cgcacacgcg cccgtaccgc acgcttgggt ttcgcccacg ccgcgctcga acacgcgcaa
     2101 acgaatcgcg gttcggctga caatctgcat aaagccgacg ttgacgcgtt cgggaaactg
     2161 cctgtgcggt tcgataagcg aaccggtttc gcgcacctgc gcgcattcta cgtcatcgac
     2221 cacaatcacc gcatgggggt tgcccatatt gacgcagctg acaggctgaa tgccggattc
     2281 gagatgcacc ccgtaaatac aggcatcatc cccctcgccc gattcgggga caaacggtat
     2341 ttcagacggc ataaacttcg gtttgcccat attgaccgta accatgccgt tatcggacaa
     2401 tttcggaaaa ataatgccct tggccgtttc aacacaaatt tctttcttat cggtcaaacc
     2461 cttgtctgca acaaaacggg caaaacaacg cgctccgttg ccgcattgcc cgacctcgct
     2521 gccgtcggca ttgaaaatac ggtaacggaa atccacacct tcggtttccg aacgcccgac
     2581 caccaaaagc tggtcgaacc cgatgccgcg gaaacggtca gcccatgctg caatcggtgc
     2641 atgctcagga ataaaatcct gactgaccgc gtcaatcacc ataaaatcgt tgcccaaacc
     2701 gtgcatttta gtaaatttca aagtgttcat attattctga aatcccgtat tatctgttgc
     2761 ttccgaattc cgaaatcccc cgcaccgaag ggaaatgctt ccatctcccg ccgcctgagg
     2821 attaaaatca gccattatac tgtttgttac cccttacaag aaacaccatg ttccgcatat
     2881 tactgttgct tttcccttgt gcaatccttg tcgcctgcac ccgaaacata ccggcaaacc
     2941 cgaccgtttc aaattgcgcg catcttcaaa accgcaccat cctgtatttt gacgcacacg
     3001 gcaaacccgc cgacggcgca gtaaagggcg gattttacaa aattatcgaa atacagggtg
     3061 caaactgcat ccttattcaa gactttaaca gcacgggcaa tgccctcggc ggatcctatg
     3121 tgccggactg ccgcaaatca tcccttttcc cgaaaaatat ttgacttcaa actgcctatg
     3181 aaccacgaca tcactttcct caccctgttc ctgctcggct tcttcggcgg aacgcactgc
     3241 atcggcatgt gcggcggatt aagcagcgcg tttgcgctcc aactcccccc gcatatcaac
     3301 cgcttttggc tgatcctgct gcttaacaca ggacgggtaa gcagctatac ggcaatcggc
     3361 ctgatactcg gattaatcgg acaggtcggc gtttcactcg accaaacccg cgtcctgcag
     3421 aatattttat acacggccgc caacctcctg ctgctctttt taggcttata cttgagcggt
     3481 atttcttcct tggcggcaaa aatcgagaaa atcggcaaac cgatatggcg gaacctgaac
     3541 ccgatactca accggctgtt acccataaaa tccatacccg cctgccttgc ggtcggaata
     3601 ttatggggct ggctgccgtg cggactggtt tacagcgcgt cgctttacgc gctgggaagc
     3661 ggtagtgcgg caacgggcgg gttatatatg cttgcctttg cactgggtac gctgcccaat
     3721 cttttggcaa tcggcatttt ttccctacaa ctgaaaaaaa tcatgcaaaa ccgatatatc
     3781 cgcctgtgta cgggattatc cgtatcatta tgggcattat ggaaacttgc cgtcctgtgg
     3841 ctgtaagccc cattcattcc cgatacccgt aaaaaatacc gtctgaaacc tgttcagacg
     3901 gcactttcac cctaagcgtt actcggcggc attttcctca cgggcaggcg cgtccagcag
     3961 ggctttgatg gacaggcgca cacggcctct gtcatccact tccaatgctt tcacgttcac
     4021 cacctgaccg acttgcaggt agtcaccgac attgcgtacg cgctcgtggg cgatttggct
     4081 gatgtgtacc aaaccgtctt tgcccggcat cacgctgaca atcgcgccga cgttgttgtc
     4141 gaggattttc accacagtgc cttcatacac tttgcccact tccacttcgg cagtaatctg
     4201 ctcgatacgt tttttcgccg catcgccggc ttcttgagtg gtcgcagcaa tggtaatcgt
     4261 accgtcttcg gcaatattga tttccgtacc ggtttcagcg gtaatcgaac ggatggtttc
     4321 gccgccctta ccgataactt cgcggatttt gtcttggttg attttcatcg taaacaaacg
     4381 cggcgcgtgt gcggacaact cttgcgggcc cgcaacggcg gctttcatct gatccaagat
     4441 gtgcagacgc gcttctttgg cctgtgccaa agcgatttgc ataatttctt tggtaatgcc
     4501 ttggattttg atgtccattt gcagcgcggt aacgccttcg gtcgtaccgg ccactttaaa
     4561 gtccatatcg cccaagtggt cttcgtcgcc caaaatgtcg gtcaggacgg caaatttgtt
     4621 gccttccaga atcagaccca tcgcgatacc ggcaacgtgt gctttcaaag gcacgccggc
     4681 agacagcagg ctcaggcagc cgccgcagac ggaagccata gaggaagagc cgttggattc
     4741 ggtaatttcg gagaccacgc gcatggtgta gctgaaatct tcaggtttcg gcaatacggc
     4801 caacaatgca cgtttagcca aacggccgtg accgatttca cggcgtttcg gcgcacctac
     4861 gcgacccact tctccggtag agtacggcgg aaagttgtag tgcagcatga agcggtcggt
     4921 gtattcgccg gacagcgcgt caatgatttg ctcgtcgcgc gaagtaccca aagttgcaac
     4981 cgccaaagct tgggtttcgc cacgggtaaa caatgcggaa ccgtgtgtac gcggcaatac
     5041 gccggtttgg atgttcaaag gacggacggt gcgggtgtcg cggccgtcga tgcgcggttg
     5101 accgtccaaa atttggctgc ggacaacatc ggcttccaag tgtttgaaaa tacctttgat
     5161 ttcgttggcg gccaaagtat cggtttcttc ggtaatcaag gcttctttta ccgcattcca
     5221 agcctcgtcc aatttggcgg aacgcgcttg tttttgacgg attttgaacg cttctttaat
     5281 ggtttcgccg gcaatcccgc ggactttggc aactaattct tcattggttt caggtgcttt
     5341 ccaatcccaa acttccggat tgacttcgtc ggcaaattca ttgatggcgt taatcgccgc
     5401 ctgcatttga tcgtggccgt aaaccaccgc gcccaacatc acgtcttcgg gcaggatttt
     5461 ggcttcggat tccaccatca acacggcttt ggacgtaccg gcgaccacca agtccaattg
     5521 cgatttagcc aattcggctt tagtcgggtt caaaacgtac acgccgttta tataacccac
     5581 gcgtgccgca ccaatcggac cggcaaacgg tacgccgctc aacaccagcg cggcagacgc
     5641 gcccaacatt gcaggaatgt cggaatcgat ttcgggatcg acggacacga ccatcgctac
     5701 gatttggatg tcgtggtaga aaccttcggg gaacagcgga cgaatcgggc ggtcgatcag
     5761 acggctggtc aggatttctt tttcgctttg tttgccttcg cgtttgaaga aaccgccggg
     5821 gattttacct gcggcgtaag tgcgttccaa ataatcgacg gtcaggggga agaagtcttg
     5881 accttctttc acttctttgt tggtggtaac ggcaaccaaa acaacggtgt cgcccataga
     5941 gactttaacg gcagcggcgg cttggcgggc aatttcgccg gtttccaaag taacggtgtg
     6001 gttgccgtat tggaaagttt taacgtgttt gtcgaacatt attgttcctt tcaaaatacc
     6061 gcactgctaa aacactaata atgcacacta aaatccgaat gtgcatagtt agggtttcag
     6121 accgtgcggc aggttgtaaa caagctttca gacgacattt cggacgctga aagcaattgc
     6181 ggattataaa ggcaaccatc cttaaaatcc agtattgata caataaaaag gccgtctgaa
     6241 acatatctct ttcagacggc cttcaaactt aaaaatcaat cctgagtcag caaagtcaat
     6301 gcttcccgat acttctcgac agttttctga atcacatcgg caggcacttt cggcgcaggg
     6361 gcttttttgt tccaaccgct ttgttccagc cagtcgcgga cgaattgttt gtcaaaagac
     6421 ggcggattgg tgccgacttc atattgatcc gccggccaga agcggctcga atcgggagtt
     6481 aatacctcat ccatcagcgt cagcgtaccg tttgtatcca aaccgaattc aaatttggta
     6541 tcgcaaataa taataccgcg cgatttggca tattccgccg cttcggtgta aagccgaacc
     6601 gccttggcgc gcacttcttc cgccaattct ttgccgataa tgcgtccgca ttcttcaaag
     6661 ctgatgtttt catcgtgatc gccgactgcg gctttggtcg atggcgtaaa aatcacttca
     6721 ggcagttgtt gcgcttcctg cataccttcg ggcagccgaa taccgcaaac cgagccggtt
     6781 ttttgataat ctttccaacc gctgcctgcc agataaccgc gcacaatcgc ctctactttc
     6841 accggagtga gctttttagc cacgacggcg cgtttttcta aaactttggc ttcgttttca
     6901 ggcaaaacat cgtaaaccgt ttgaccggta aagtggttgg gcataatatg cgccagtttt
     6961 ttaaaccaaa aattggaaat ctgcgtcaga atctcccctt tgctcggaat cgggtcgtcc
     7021 aaaatcacat caaacgcgga caggcggtcg gaagcgacca tcagcatacg tttatcgtcg
     7081 atttcatata aatcgcgcac ttttccagaa tagatcttta ccaaaccaat ctcactcatt
     7141 tcgccccccc tgaaaatatc ttgaaaatac cgacccgaca cccgacaggt ttgaatcgca
     7201 aaccgatatt ctagccgaag tcggcgcaaa acaataccca tggcacaaaa agccaacccg
     7261 tcaaccgtcg gcaaagtttt ggcactataa taccgacagc aagtcctaca atacactttt
     7321 accaaaggaa atacctcatg agaatcctat tgacaggctc gaaaagccaa ctggcacgct
     7381 gcctgcgcga ccgtcttccg gaagactggg aaaccattgc gacggattcc gcatccctag
     7441 acattaccga tgccgatgcc gtctgcaaca tggtcaaaag tttccaaccc gacgccattg
     7501 tcaacacggc tgcctatact gccgtcgaca aagcggaagg cgatgcggca gcggcatttg
     7561 ccgtcaatgc ttccgccgtt tacaaccttg ccttggcagc acatcgcgcc catgcccgat
     7621 tcatccacat ctcaaccgac tatatctttg acggtaaagg gaaaaggccc tatcaggaaa
     7681 gcgactttac caatccttcc aatgtatacg gacaatccaa aaccgccggc gaactgctcg
     7741 cactgtctgc caatcccgac agccttatcc tgcggacttc ttggctgttt agcgaatacg
     7801 gggacaactt tgtccgcacc atgctgaacc ttgcgcggga acgttccccg ctgtccgccg
     7861 tccacaacca aatcggctgc ccgacctatg ccggcgacct ggctgccgcc atcatccgcc
     7921 ttttgcagca aacgtcgccc gtgcgcggca tttaccacta cgccggcggc aaatccgtat
     7981 cctggtacga atttgcccaa catattttcc aagcggcatc gcaacagcag acatccttcc
     8041 ccgttcccga attgactgcc gtttcagaca aggaatatcc gaccgccgcc cccaggcccg
     8101 catacagcat tttggactgc cgcaaaatcg aaaacgactt cggcatcaaa ccgtcagact
     8161 ggcagaaagc ccttgcacag gtcgtttcca agctgctctc tagtgggtac tagatataat
     8221 gcagcatccg ataaagtaaa gccccgaagt ggcagcttcg gggcttatcg gatagaaagg
     8281 aggcttgaag aaatggcgaa agttatttta ttcctgtttc ttttgttagt ttgctcgcca
     8341 gcctactaat gaaaaactga aataacaagg ggtggcaaat taccgcgccc ctttcgccaa
     8401 cctttcttcg agccatttta ctacaatggt tttaaaaatc aaggattgcc tgatgccgcc
     8461 cgcccctctg tttcctccgt caagcaccgc cttggcggtt ttcttatata gtggattaac
     8521 aaaaaccagt actgcgttgc ctcgccttgc cgtactattt gtactgtctg cggcttcgtc
     8581 gccttgtcct gatttttgtt aatccactat aaaatctacc gattacacaa acacatatca
     8641 tctttacaca atcatgcttc catcaacagt aaaacatgat atgattgcca acaataacat
     8701 ctcacaataa attttctaat ttttattgaa aaaatcaata aataagaatt ctcccaaccg
     8761 acaaataaaa taaagaaagg gttaatatgc aacatcgaag aagactagca atttaccaag
     8821 catccaaacg tgcttccttt accggcaggt catcagcccc gcaaaaacgt aaagaacgtt
     8881 aatttgaaaa aaatgccgtc tgaagtcctg cttcagacgg cattttttta ccgttcgaga
     8941 aactgtttca acctgtcctc atccaaaaac cagtggcaga tttcctcatc tcccgccaac
     9001 aaaacgggaa ccagctcatt gtatttttct tccaaaacag gattttcatc cacatcgacc
     9061 acttccagcc cgaacccgta ttcattttga aaaggtttga gtgcatcgcg cattttgtgg
     9121 cacaagctgc aatattcacg aaacatcaag gtcaatttca tccgcgtttc cttatctgtc
     9181 aatttgcaca cgccaaagcc ttagacgcag cagaatcatg gtctatttgg gaaaaaacaa
     9241 tgttttcaag gaagatgata ctcaagtcct gccaaaaaca gcaaaaatgc cgtctgaaca
     9301 gttcagacgg catttccaaa accgttttac gcttgaacat tgatacccgc cgtaaccgtc
     9361 ggttgcgcat tgtgcgccgt cagaaacgaa gcggcaagct ccccacagca gccgcagcag
     9421 ctcgctacgc ccaattgcga ctgcaaatcg cccattgtgg tcgcgccggc ggcgatggtt
     9481 tccttgattt gatggtcggt aacggcattg cagatgcaga caaacatttt gtgctccgtg
     9541 tgttctcaaa ctatcgtacc gatagcggct tttattatcg tatgcgaata taaataaaaa
     9601 cggttcgcat tgcaaggtcg gtatacacgg tttgtcttgg taatttttta tcaagtttgc
     9661 attttcgatt gatttcttat taaaccaaag tagaagcctc agtttcggga atggtgttcc
     9721 ttcactacac cctgcaacca tacgttggca acatgggtat aaatctgcgt cgtattcaaa
     9781 tcggcatgtc ccaacatatc ctgaaccacg cgcaaatcca agccgtgccg caccagatgc
     9841 gtggcaaagg cgtggcgcag gctgtgcggg ctgatgtgcc cgatgcctgc ctgacttgca
     9901 tattctttga caatcatcca tgccaactga cgggaaatgc ccgtcttttt ctgactgaca
     9961 aacaatgcgt cgcaattcct gcctttcagc agaagtgggc gtgcctccgt ataatagcgt
    10021 tccacccaat acgccgactc ctgccccatc gggaccatcc tctgcttatc accctttccc
    10081 agcgcggtaa tacagcccct gtccaaatcc acattgccga agttcagccc gaccgcctcg
    10141 ctgacgcgca agccggtcgc gtacatcaat tcgagcaaag ccttatcccg caaaccgtgc
    10201 ggcgtgtcgg tatccggggc ggcaagcagt cgggaaatct gctgctcggt gatcagggtc
    10261 ggaatattct tgtcgatttt gggcggtttc agcaggcagg tgggattgtc cgtccttatg
    10321 ccttcacgct ccatccatat atacaggcgt ttgcacgccg ataatgcgcg cgcctgcgaa
    10381 ctccgttgct ctccgtcaac ataaaccgcc gccgccaaat ccgcttcgtc cgcatccttc
    10441 agcgttctgc ccgattggga caggcggcgg gcgatttttt ccaaatcgcg ccggtaaccg
    10501 tttaaagtat tctgactgag ccgcctgtcc aaccacagcg tttcaagcag cctgtcgatc
    10561 aaaccttctt ccataccgtt ccaaacaaat gccgtctgaa tcttcttcag acggcatggt
    10621 tcacattatc gggaaagcgt ttccaatact tcctgcgcgt gacccgccac tttgactttc
    10681 cgccattcat gggcgatttc tccatcctta ttcaagacga acgtactgcg ctcgatacct
    10741 aacgactctt tcccgtacag tttcttcaat ttgatgacat caaacaggcg gcacactgtt
    10801 tcatccttgt cgctcaacag ctcgaaccgg aaaccctgct tggcgcaaaa attctgatgc
    10861 gcctttacgc cgtcgcggga aataccgacc acggtataac ccaatgcctc aaactgttcc
    10921 aaacgcgcat tgaaatccaa gccttccgtc gtacagccag gcgtactgtc tttcggataa
    10981 aaatacacga ccaaaggcag atgttctgcc gaatgaaaat ccgcaccgct gctcgaaggc
    11041 agggtaaatt catatttcac atccatagtc ctactcccga tattcccatt attcaaaacg
    11101 gcacgcagac gcaccgccgc aattgccaaa ccaaccccga ttctaccgcc ccaaaggaca
    11161 aggattcaac cgccggaaac atccaaaccg acacacgacg gcatgaaaaa tatccatgtc
    11221 aaaccacaaa atatgttccg atttaaaaac agaatgttat aaaacccaat ccccaaaaca
    11281 caacaagacc gcccgcctac gggcagtctc ctgtcagacg acatacttta cagatggctg
    11341 ttttttcaac aaaataacgc caatactcaa aaatatggaa tcaaaaatgt ccatccatac
    11401 tctgaaacgc ctgccctcat cgctgctgct cggtctctgc ctttccctgc cgtcagccca
    11461 cctttttgcc gacaacgaca ttttagggca atttttagaa cagaacatgc ttacctcctc
    11521 cgatccgata gaaatattcg ccgaaagcac aatacacccc accaacaccc aagccattac
    11581 aggcggtctg attctctcct cacagtctgc cctggtcgtc aacaacaaaa ccggacagat
    11641 actgtatcag aaaaacgccg acaggattat gcccatcgcc tccatttcca aactgatgag
    11701 cgcgatggtc gttttggatg caaacttgga catgaacgaa accgttacca ttacgcccga
    11761 cgaaatcgac cgcatcaaag ggaccggcag ccgtcttgcc ataggtacgg cacttacacg
    11821 caaagaactg ctgcacctga gcctgatgag cagcgaaaac cgcgccaccc atgcattggg
    11881 cagaacctac cccggcggca tgggcgcatt tgtcgccgcc atgaaccgca aagcccaaag
    11941 cctcggtatg tacggcagcc gcttttacga accgaccgga ctcaacttcc aaaacgtttc
    12001 caccgccaaa gacctgagcc ttatggtcaa cgccgccgcc caatatccgc aaatccgcac
    12061 caactcgact tccaactacg cctcggtaca gaccaaaaac gggcagcaga actacaaaaa
    12121 ctccaatgcc ctggtcagag aaggcatgtg gaacatcgaa ttgcagaaaa ccggctacat
    12181 acgcgaagca ggcaggtcta tggttgtcaa agccaacatt caaaatcaac ccgttaccat
    12241 cgtattgctg aactcgccca catccgccac acgcgtcaac gacgcccgca aaatcgaatc
    12301 gtggatgctg cagcaacgct cctgacatac aaatgcccgg cggaaaaccg cccaaacaca
    12361 aaaaaaattg gtaatttttc ctattcaagg ctacaattcg acacgcacag ggcgtctgcc
    12421 cgatttcaca atcataataa cggagttaaa aatatgacag ctaaaggaca aatgttgcaa
    12481 gatcccttcc tgaacgccct gcgtaaagag cacgttccgg tttcgattta cttagttaac
    12541 ggtatcaaat tacaaggtca ggttgagtct ttcgatcaat acgttgttct cctgagaaac
    12601 acttccgtca cccaaatggt ttacaaacac gccatttcca ccatcgtacc ggcacgctcc
    12661 gtcaacctac aacatgaaaa cagaccccaa gccgcaccga cttcgaccct cgtccaagtg
    12721 gaaaccgtcc agcagcctgc cgaataatcc gcacgaagca tgacgtgtca tatctttcaa
    12781 taccttaccg gacaacggta aggtattttt attttcagac agcatttaaa aatgttattg
    12841 caaaacatcc ttccattcgc ccattgcctt ttgcggaagg cacttcccga aggtggcaat
    12901 gctttggacg gcaccgccgg caacggacac gacacccttt tcctcgcaca aaccgcaggc
    12961 atccggggga aagtgtgggc attcgacatc cagccgcaag ccctgagccg cactcgatgc
    13021 cgtctgaaag aagcgagata cgagaatgtg caactcatct tagacggaca cgaaaacctg
    13081 aaacaatatg tttcagaacc actaaatgcc gccattttca actttggctg gctgcccggc
    13141 ggagataaaa gccttaccac ccatacggaa accagcattc ccgccctttg cgcaaccctc
    13201 tccctgctga aagaaggcgg tatgcttatt gccgtcctct atccgggaca cgaaaacggc
    13261 aaacaggagg cagaagcaat cgaacaatgg gcaaaaaacc tgcctcaaga acagtttgcc
    13321 gttttgcgtt acggctttac caaccggaaa aacaacccgc cctatctgtt ggcatttgaa
    13381 aagttacgtc aaaaataaat gtttgcggta aaataagccg attccaaccc ttattttgat
    13441 aagagccgac tatgcagtat ctgattgtca aatacagcca ccaaatcttc gttaccgtta
    13501 ccattttgtt gttcaacatc cgctttttcc tgctttggaa aaatcccgaa aaacctttgg
    13561 cgggcttgtg gaaggcactg ccccacctca acgacacgat gctgctgttt acgggattgt
    13621 ggctgatgaa aatcacccat ttctccccgt tcaacgcgcc ttggctcggc acaaaaatcc
    13681 tgcttctgct cgcctatatc gcattgggta tgatgatgat gcgcgcccgc ccccgctcgg
    13741 tcaaattcta tgccgtttac ctgcttgcca tttgttgcgt cgcctgtatc gtttaccttg
    13801 ccaaaaccaa agtcctgcca ttctgaaaca ctgccatgaa caacagacat tttgccgtca
    13861 tcgccttggg cagcaacctt gacaaccccg cacaacaaat acgcggcgca ttggacgcgc
    13921 tctcgtccca ccccgacatc cggcttgaac aggcttcctc actgtatatg accgcgcccg
    13981 tcggttacga caatcagccc gatttcgtca atgccgtctg caccgtctcc accgatatgg
    14041 acggcatctc gctgctctct ttgctcaacc gtatcgaggc ggatttcggg cgcgaacgca
    14101 gtttccgaaa cgcgccgcgc acattggatt tggacatcat cgactttgac ggcctatcca
    14161 gcgacgaccc ccgcctcacc ctgccgcatc cgcgcgcaca cgaacgcagt ttcgtcatac
    14221 gccctttggc agaaatcctc cctgattttg ttttaggaaa acacggaaaa gttgccgaat
    14281 tgtcaaaaca actgggcaat caaggtatcc gtcttttacc ggataagtaa ttccgcacgc
    14341 ggatgccgtc tgaatgccgg tttcagacgg catttttcct ttgccgccaa cacgcgtgca
    14401 aaaaaatcgc cccttggaaa aggggcgcaa aaggaacaca aaccactacc aaaactttaa
    14461 atctgcaaca ttgcctgccg catactgtat ccgacaggat ataaagccct cactaaatcg
    14521 tttcgagaaa tccaaacttc ttcatcgccg acagaaaatc tgcctttctc cggcaccagc
    14581 tccaacaaaa acggttgaac cgccgtatgc agcctgtcct tacaccgccc cagctttctg
    14641 gacaaggcgg acagggcacg cttatagaca ctatccttgc ggtcaagttc ccgcgcactg
    14701 ccgacccagc tcaaacgaag gttgcggctt tcatcctcaa tcagcaaaat gcctgttttg
    14761 acttccccca cctctggctc gcatgaaagc gaaatataat atttgccgtc gatgttgaca
    14821 tacgccgcct catgcacctg acagttgcag ccggaagtgg caagcagcga ataaacagaa
    14881 tcccgatgca gtttcaaaat atcaagggaa atctgtttga aaatactttc cggcattttt
    14941 ccctcctttc gtctgctgcg ttgtttactg gattgactgc attatacaga catctcccaa
    15001 tcttgcaaat gataattgtt cctatttttt aaaaaattta taaattattg atagatatgt
    15061 gaattaattt taagatttaa aatctctttc tcaaaaaaac acaaaaatgc cgtctgaaac
    15121 gtgttcagac ggcattggct gcacaggcaa tccgtttaaa atttcacgcc cttatgcagc
    15181 gcaacgatcc ccgcactcat attatgatag tccacactgt caaatccggc atccagcatc
    15241 atttgcttta aagtttcctg atcggggtgc atacggatgg attcggcgag atactggtag
    15301 ctgtccgcat ctttggcaat cagtttgccc atgaccggca gcagcttgaa cgaatagaaa
    15361 tcatacgcgc cttcgagcgg cttgtagatt ttggaaaact ccaacaccag caacgtgccg
    15421 ccaggtttca aaacacgata catctctttc agcgcggcat ctttatgcgt catgttccgc
    15481 aagccgaacg ccacggaaac taagttgaaa taattgtcag ggaaaggcag tttttccgca
    15541 tcggcaagcg acacgggcaa aatcatgcct tcgttcaaca gacggtcgcg cccgacggtc
    15601 agcatagagg aattaatatc ggtcagccaa acctcgcctt ccttgccgac ccgtttcgcc
    15661 caaccgcgcg acaaatcgcc cgtaccgccc gcaatgtcca acactttatc gccttttttc
    15721 aggtgcgccg tgttgatggt gaaatgcttc cacaccctgt gcagccctgc cgacatgaca
    15781 tcattcataa tgtcgtagtt tttggcgacg gagtggaaca cttccgccac tttgccggct
    15841 ttttcatctt cgttgaccgt gctaaacccg aaatgcgttt tttgtccgcc catattctaa
    15901 ccacctccct gataccgccc tacggcatcc caaacttaac aatctgattg cttttcaaaa
    15961 cgcgacgcgc ccgccgccgc caatttgtcc aaatattcct gccacatcgc atcgtatccg
    16021 tatgccagtc tgtgcagata cgcccaatcg taaagaccgc tgtcgtgccc gtccgaaaaa
    16081 ctgattttca gcgcgtactg tccgacaggc tgcaaatccg taatttgcac atctgcctta
    16141 ccggtctgca aaacatcctg tcccacaccg tgtccgcgca cttccgcact cggcgaatag
    16201 acgcgtaaaa attcggcagg cagattttta ggttcgtccc cataagtcaa aaccaacacg
    16261 gtacggtttt tcaacaaacg gatttcaaca ggaatattat tcaaaaaaca cctcggttcg
    16321 gcatacaata tccggcaggc gcaggcgtgc cttcaaacgg cgcgtatttt aacagcttta
    16381 tcccgatacc gatattcaaa cccacacttt aaacggcatt gatatggaca atctcgtatg
    16441 ggacggcgtt cccgacatcc gcacactcga ccaaaccatc cgcaaacacg cacacccgct
    16501 caacctgatt gtctgcctcc ccgataatca gattcccgat tttcaaaccg cacaagatgc
    16561 ttcggacgcg gaatgccgtc tgaagcaccg tttggatcag gcaacgcagt gcctccagtt
    16621 cgacagcatc aacctcatcg aacacatcct gcccgatgtc cgcttctggc tggttccccc
    16681 ttcacgcacc cgccgcctgc acgaacactt ccaccacatt tcctggcaga ccgaagccat
    16741 cccgcaaacc gaaagcaaac ccgacaaacc ctggtttgca cttccacaaa catccgaacg
    16801 gcaaaaaccg gaacacatcc tcgttatcgg cgcgggcata tccggcgcgg caaccgccca
    16861 cgccttagca tcacacggca tttccgttac cgtattggaa gcccgaaaag ccgcccaagc
    16921 cgccagcggc aaccgccaag ggctgctcta cgccaaaatc tcgccgcacg acaccgaaca
    16981 aaccgaactg ctgcttgccg gctacggcta caccaaacgc ctgctcggac acatcctgcc
    17041 cgaatccgaa acctggggcg gcaacggcat catccacctc aattacagcc gcaccgaaca
    17101 acaacgcaat cacgaattgg gtttgcaaaa acaccataac cacctctacc gcagcatcac
    17161 gccggcagaa gccgaaaaaa tcgccggcat cccgctgaac acgccctacg ccgaaccatt
    17221 atgcggactg ttttggcagt acggcgtatg gctcaatcca cccgcattcg tccgcaccct
    17281 cctcaaccat ccgctcattg gactacacga agacacaccg ttaaccgaca tttcccacga
    17341 cggggaaaag tggattgcaa gcacgccaaa cggcatattt tccgccacac acatcatcta
    17401 ctgcaccggc gcgcacagcc ctcgcctgcc cgaaaccaac ctcgccgccc tgcctctcag
    17461 gcaaatacgc ggacaaaccg gcctcacacc gtccaccccg ttttccgaac aactgcgttg
    17521 cgccgtttca ggcgaaagct acatcagccc gtcgtggcac ggactgcact gctacggcgc
    17581 gagttttatt cccaacagca gccataccgg atggaacgaa gccgaagaag cctcaaaccg
    17641 ccaagcattg gcacacctta accccgccct ttccgaatca ttgtttgccg ccaacccaaa
    17701 cccccaaaaa caccaagggc acgccgccat acgctgcgac agccccgacc accttcccct
    17761 agtcggcgca ctcggcgaca ttgccgccat gcggcagacc tacaccaaac tcgcgctgga
    17821 caaaaactac cgcatcgaca ccccatgccc atacctgcct aatgcctacg tcaacaccgc
    17881 gcacggcacc cgcggactcg ccaccgcccc catctgcgcc gccgccattg cagcccaaat
    17941 cctaggcttg ccccatccct tttcacaacg cctgcgccac gccctacacc ccaaccgcac
    18001 catcatccgc gccatcgtca gaaggaagga tctaacccct taagcctttg ccgcatgccg
    18061 tcccgaccac agaaaatcat attcaaataa acataccaat cctgacggta aaatatcgaa
    18121 aacacccata acgttttctt cccaaaataa ggagtaagga atgcctaaca aattgccttt
    18181 gctgtccaag atgaatgttc cgtaacattc gaagacttcc ttaaccctgc cagccgtttc
    18241 ggtttctgta ccccctgtta gataaggaag gaatgaaaaa gccctgttga ttgtatgaag
    18301 taaagggcgt taatttttgt taatcttccc ttctcaggaa ctcaatatat aaggatgtta
//
LOCUS       DAWKOX010000023        18251 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.023, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000023 DAWKOX010000000
VERSION     DAWKOX010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18251
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.023"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            660..2108
                     /gene="gnd"
                     /locus_tag="WJK78_000569"
     CDS             660..2108
                     /gene="gnd"
                     /locus_tag="WJK78_000569"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ7597528.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDERAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPTWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2171..3442
                     /gene="waaA"
                     /locus_tag="WJK78_000570"
     CDS             2171..3442
                     /gene="waaA"
                     /locus_tag="WJK78_000570"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ7597529.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRKSGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGDRQVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACWHALASGAAVQVESADAWREAVEKTLSSKGGGMQMQ
                     VRVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3483..3932
                     /locus_tag="WJK78_000571"
     CDS             3483..3932
                     /locus_tag="WJK78_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ7597530.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGLVSCEARRE
                     VENAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISW"
     gene            3965..4939
                     /locus_tag="WJK78_000572"
     CDS             3965..4939
                     /locus_tag="WJK78_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ7597531.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGIKEA
                     LAWSGLWVAVSCLFAGWLYFELAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEGDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLSDVEERFIFLKYGLA
                     FVLSFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            5008..5083
                     /locus_tag="WJK78_000573"
     tRNA            5008..5083
                     /locus_tag="WJK78_000573"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5041..5043,aa:Lys,seq:ttt)
     gene            5303..6556
                     /gene="murA"
                     /locus_tag="WJK78_000574"
     CDS             5303..6556
                     /gene="murA"
                     /locus_tag="WJK78_000574"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ7597532.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGA
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVEQLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
     gene            6637..7815
                     /locus_tag="WJK78_000575"
     CDS             6637..7815
                     /locus_tag="WJK78_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ7597533.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMIHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDDMILDIGPKSAAELAELLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(7882..8130)
                     /locus_tag="WJK78_000576"
     CDS             complement(7882..8130)
                     /locus_tag="WJK78_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ7597534.1"
                     /translation="MLTPEQVKAMIEDVAKCEHIKVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(8220..9137)
                     /gene="ftsX"
                     /locus_tag="WJK78_000577"
     CDS             complement(8220..9137)
                     /gene="ftsX"
                     /locus_tag="WJK78_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ7597535.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPEEIV
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(9134..9784)
                     /gene="ftsE"
                     /locus_tag="WJK78_000578"
     CDS             complement(9134..9784)
                     /gene="ftsE"
                     /locus_tag="WJK78_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ7597536.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(9781..9972)
                     /locus_tag="WJK78_000579"
     CDS             complement(9781..9972)
                     /locus_tag="WJK78_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597537.1"
                     /translation="MPSESASDGIFPARPSVSAKLIHYLKTGGIFIIGTVLPIVQTAY
                     PCGRNRPKRYAAHSLQDLL"
     gene            complement(9980..10462)
                     /locus_tag="WJK78_000580"
     CDS             complement(9980..10462)
                     /locus_tag="WJK78_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ7597538.1"
                     /translation="MKYLNLAAITLGATFAAHTASADELAGWKDGAAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            10586..10939
                     /gene="arsC"
                     /locus_tag="WJK78_000581"
     CDS             10586..10939
                     /gene="arsC"
                     /locus_tag="WJK78_000581"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ7597539.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLESARGMMRVKDDLYKELGLDNPDLDNNALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            10936..11592
                     /locus_tag="WJK78_000582"
     CDS             10936..11592
                     /locus_tag="WJK78_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ7597540.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFTSSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            11708..13102
                     /locus_tag="WJK78_000583"
     CDS             11708..13102
                     /locus_tag="WJK78_000583"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ7597541.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNAGNVVYQTRRFDRYKEVIAELLEKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGATLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNGKLAELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNTLADECLYFYVKQTPTEADVQKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            13123..13518
                     /locus_tag="WJK78_000584"
     CDS             13123..13518
                     /locus_tag="WJK78_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597542.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDYAWNAVYGAGGTKASGN"
     gene            13522..14013
                     /locus_tag="WJK78_000585"
     CDS             13522..14013
                     /locus_tag="WJK78_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7597543.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDFGTLLGSAAVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(14136..16730)
                     /gene="mutS"
                     /locus_tag="WJK78_000586"
     CDS             complement(14136..16730)
                     /gene="mutS"
                     /locus_tag="WJK78_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ7597544.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCTTHMGSRLLALWLHHPLRNRAHIRARQEAVTALDSQYEPL
                     QCRLKNIADIERIAARIAVGNARPRDLAALRDSLFALSEIDLSTNGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAALNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            17174..18178
                     /gene="gap"
                     /locus_tag="WJK78_000587"
     CDS             17174..18178
                     /gene="gap"
                     /locus_tag="WJK78_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ7597545.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPSGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTSDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
BASE COUNT         4182 a         4454 c         5259 g         4356 t
ORIGIN      
        1 ttcgtgggaa tgacgggatg taagttcgtg ggaatgacgc ggtacaggtt tccgttacgt
       61 atccccatcc gaaagtttac ttatacacaa gcaatccaaa gttatctgac tgaaatattg
      121 tgagatttac ccgcaaatct cattttctcc accacttata cacaaactcg gatgcacact
      181 ctgccaatat gcagagaaaa agacattcgt gccgttaact tactattccc acacgttcca
      241 aacacatttc cctctcaaac ctccacagta ttcccgttct taaaggcgcc agcagccatt
      301 cggtaaagaa aagtaggatg ccatctgcac aacaagcaaa ctgtccacaa aaactattct
      361 tcatgaaaaa caatccacag gtatgcacaa aagggaatcc gccttaccga caccctttta
      421 aaacggcaat ctcgatgatt tttaaaataa aaaaaagtta cccacagaaa atgtctccta
      481 tcaatataat catcgtttta ttatttaaat tttatatttt atttataagc cttcagggaa
      541 acgcacggta aagcgtaaag gcatcttttc aaaaaattaa aaagttaagg attgttaaac
      601 aagtgtaaat caggtagagt tgcggtcgat aaattaaatc tataacggag cttcctgcaa
      661 tgaaaggcga tattggtgta atcggtttgg cggttatggg gcaaaacctg attttgaata
      721 tgaacgattg cggatttaag gttgtcgcct acaaccgaac aatcggtaag gtggacgaat
      781 ttttaaacgg cgcggctaag ggaacggata ttgtcggcgc gtattccctg caagacttgg
      841 tcgataagct ggcaaaaccg agaaaaatca tgatgatggt tcgcgcaggt tcggtggttg
      901 acgactttat cgaacaactg cttccgttgt tggaagaagg cgacatcatt atcgacggcg
      961 gcaatgccaa ttaccccgac acgacacggc ggacacatta ccttgccgaa aaagggattt
     1021 tgtttgtcgg cgcgggcgta tccggcggcg aagaaggcgc gcggcacggc ccgtctatca
     1081 tgccgggcgg agatgagcgc gcttgggaag ccgtcaaacc gatttttcag gcgattgccg
     1141 ccaaaacgcc gcagggcgaa ccgtgttgcg actgggtcgg cagggacggc gcggggcatt
     1201 ttgtcaaaat ggtgcataac ggcatcgaat acggcgatat gcagttgatt tgcgaagcgt
     1261 accagttcat gaaagacggc ttggggctgt cttacgacga aatgcaccgc gtgtttgccg
     1321 agtggaacaa aaccgagctg gattcttatc tgattgaaat cacagcggca attttgggct
     1381 ataaggacga aggcggcgaa ccgctggtcg agaaaatcct cgatacggca gggcaaaaag
     1441 gcacgggcaa atggacgggc atcaatgctt tggatttggg tattccgttg acgctgattt
     1501 ccgaagcggt attcgcccgc tgcgtttcgt cgttcaaaga acagcgcgtg cagaccggca
     1561 agctattcgc ccgaaccgtt acgcccgtcg aaggcggcaa acaagaatgg gttgaggcgt
     1621 tgagacaggc cctgcttgca tctaaaatca tttcctacgc acaaggcttc atgctgatcc
     1681 gcgaagcggg cgaaagctac ggctgggatt tggactacgg caacactgcg ctgctgtggc
     1741 gcgaggggtg catcatccgc agcgcattct taagcaatat ccgcgacgcg tatgaaaaca
     1801 atcccgattt ggtgttcttg ggtgcggatc cgtatttcaa aaatattttg gaaaactgcc
     1861 tgccgacgtg gcgcaaggtg gttgccaagg cggtcgaatg cggcatccct atgccttgca
     1921 tggcttcggc gattacgttc ttggacggct acacgaccga acgtctgcct gccaacctct
     1981 tgcaggcaca gcgcgactac ttcggcgcgc acacttacga acgcaccgac aaaccgcgcg
     2041 gcgagttttt ccataccaac tggacgggca agggcggaga taccgcttcg acaacctacg
     2101 atatttgatt ccgttgccga aatgccgtcc gaaccgttcg gacggcattt gttttgcagg
     2161 aaatagaaag atgttccaat ggctttatga tgtattgtgg ctgcttgcgc cgatatggat
     2221 acggcgttat ttggacaaac gctccggaag tgccccggca tatcgggcgc atcgggacga
     2281 gcgtttcggc aagccgtatc cgaatcccgt taccggcgcg gtttggatac acgccgtttc
     2341 ggtcggagaa acgcgtgccg cccagccctt gatacgcgag ttgcggcagc gttttcccga
     2401 tgcgccgctg ctgatgacgc agatgacccc gacgggacgg gaaaccgcgc aagttctgtt
     2461 tcctgatgca caatgccgtt atcttccgta tgacaaaaaa acgtgggtac ggcagttttt
     2521 gcgcgaacac cgcccgatgt tcggcatttt gatggaaacc gaaatctggc ccaacctgat
     2581 gacggagtgc cggaaatcgg gcgttccgct gtttttggcg aatgcgcggc tgtcggaaaa
     2641 atcgctaaac ggttatctga aagtccgccg cctgatccgt cctgccgccg cttcgctgac
     2701 gggttgtctg gcgcagacgg aggcggatgc ggcgcggttg gcgaaattgg gcgcggcatc
     2761 cgtgcaggtg tgcggcaata ccaaatacga cctgatgccg tcggaacaga tgaaaacgct
     2821 ggcggggcag tttgaaaaac gcatcggaga ccggcaggtt gccgtgtgcg gcagcacgcg
     2881 cgtttatcgg ggtgaagacg aggcggaaaa actgctggcg gcgtggcaac aatatcgcgg
     2941 cgatgcgctg ctggtcgtcg tgccgcgcca tcccgagcat tttcagacgg tatttgaaac
     3001 ggcaaaacgc ttcgggttta aggttcagcg gcgcagcgac ggtttgccgg tcgaacctga
     3061 tacgcaggtg tggataggcg acagtatggg cgagctgtat gcgtattact tgtgcgccga
     3121 tgtcgctttt gtcggcggca gtctggtcga ttcgggctgt cagaacatta tcgaaccgct
     3181 ttcctgcggc gttccgacga tattcggctt ttcaacctac aatttttccg aagcctgctg
     3241 gcacgccttg gcatcggggg cggcggttca agtcgaatcg gcggatgcgt ggcgtgaagc
     3301 cgttgaaaaa accttatcgt ccaagggggg cggaatgcag atgcaggtgc gcgtggacgg
     3361 ctttatcgca caacatcgcg gagcgggcgc gagaatcgcc gaggcggtgc gggaagcggt
     3421 atgcggacat cgggggcgat agtgatacaa tccgtatccg agttttccgt ttggagcatc
     3481 gtatgagtat ttatgccgtc gcgcacatcg ttcatctgta ttgcgctatt gcctttgtcg
     3541 gcggcgtgtt ttttgaagtg ctggttttgt ccgtcctgca tacgggactg gtgtcgtgcg
     3601 aggcgcggcg cgaagtggaa aatgcaatgt cttaccgcgc cgtcagggtg atgccgtttg
     3661 tggtcggact gctgttcgcc agcggcatcg tgatggcggc aaaccgctat ctttctatat
     3721 tgggcgaacc gtttgccact tccttcggta cgatgctgac gctgaaaatc ctgttggcgt
     3781 tcagcgtgtt ggcgcacttc gccatcgccg tcgtcaaaat ggcgcgttcc acactgaccg
     3841 tcggctggtc gaaatacata cacaccgtcg tctttaccca tatgctgctg attgtctttt
     3901 tggcaaaagc gatgttttat atcagctggt aacacaatta catttcaaat caggagattg
     3961 aaccatgaca gaatatcccg gcatcgggtc gccgttgttt tacggcgttt tttttgcggc
     4021 agtgctggtc atgattgcct tggatatgtt ttcgctgaag aaaaacggca gccataaagt
     4081 cggcatcaaa gaagccttgg catggagcgg cttgtgggtt gccgtatcct gcctgttcgc
     4141 gggctggctg tatttcgaac tcgccggcaa tcccggctac ggcgcggcag tcgcaaaaga
     4201 aaaagtattg gaattcttta ccggctacat tttggaaaaa tcgttggcag tcgataatat
     4261 tttcgtgttc ctgatgatat tcggctactt caaagtcgca ccgcagtttc agcaccgcgt
     4321 gctgctgtac ggcgtattgg gcgcattggt attgcgcacc gtcatgattt tcgtcggcgc
     4381 ggcactggtt cggcagttcg agtggattct gtatctgttc ggcgcgttcc tgctctatac
     4441 cggcatacac atgatgaagc ccgaaggcga tgaggaaggg gatttggcaa acagcaggct
     4501 gctgaatgcc gtcaagaaag tcgttccggt cggcacggaa tttcacggcg agaaattttt
     4561 taccgtcgaa aacggcaaaa aaatcgccac gccgctgttt ttggtgctgg tcatgattga
     4621 attgagcgat gtcgtgtttg ccgtggacag catccccgcc gtctttgccg ttaccaccga
     4681 tccgtttatc gtgctgacct ccaatatttt cgccattttg ggtttgcggg cgatgtattt
     4741 cctgctgtcg gatgtggagg aacgctttat cttcctgaaa tacggcttgg cattcgtgtt
     4801 gagttttatc ggtgtgaaaa tgctggtaat gcattgggtg catatcccga tttccgtttc
     4861 gctgtcggtc gtgttcggcg cgttgggtgc atcgatactg acctcgttaa tttatacgaa
     4921 aaaacagcct gataaataaa atgccgtctg aacgccgaca aaatggttga cagcatcagg
     4981 cttgatgtat agaatttcga gcttatcggg tcgttagctc agtcggtaga gcagcggact
     5041 tttaatccgt tggtcgagcg ttcgaatcgc tcacgaccca ccagataaaa caaaaaaagc
     5101 tgagttttca aaactcggct ttttttgtct tccgacaatc cttgttcgga aagcgcggca
     5161 tttcgtcaaa ttctttggtg cggcttccgt atttttcccg aaaatccctt ataattccgc
     5221 ctctgcaacc ttcatcgggt gatgctttat gcgttgtccc gagtattgaa atattacaag
     5281 tacccaccag gaaagaacaa acgtggacaa actgaaaatc tccgcaaacg gcccgctcaa
     5341 cggggaaata acggtctcgg gcgcgaaaaa cgcggcattg ccgctgatgt gcgcgggttt
     5401 gctgacatcg ggtacgttgc gcctgaaaaa tgtgcctatg ctggcagatg tgaaaaccac
     5461 acaaaagctg cttcagggga tgggcgcgcg cgtcctgacc gacaatatca gtgaatttga
     5521 aatcaacggt ggtacggtaa acaacacctg cgccccttac gaattggttc ggacgatgcg
     5581 ggcctcgatt ttggtgctgg ggccgacgct ggcgcgtttc ggcgaggcgc aagtcagcct
     5641 gccgggcggc tgcgccatcg gttcgcgccc cgtcgatcag catttgaaag gcttggaagc
     5701 gatgggtgct gagattgtta tcgaacacgg ttacgtcaaa gccaaaggca aactcaaagg
     5761 tacgcgcgtg gcgatggatg tcgttaccgt cggcggcacg gaaaacctgc tgatggcggc
     5821 gacgctggcg gaaggtacga cggttttgga aaactgcgcc attgagcctg aagtggtcga
     5881 tttggcggaa tgcctggtca aaatgggcgc gaaaatcagc ggcatcggta cgtccacaat
     5941 gattgtggaa ggtgcggacg agctgcacgg ctgcgaacac agcgtcgtcc ccgaccggat
     6001 tgaggcgggg acgttcctgt gcgcggtggc gataaccggc ggcagggtgg ttttgcggaa
     6061 tgccgcgccg aaaacgatgg aagtggtgtt ggacaaactg gttgaggcag gtgcggtgat
     6121 tgaagcgggc gacgattgga tcgccatcga tatgcggcag cgtccgaagg cggtggacat
     6181 ccgcacggtc gtccaccccg gcttccccac ggatatgcag gcgcagttta tggcattgaa
     6241 tgccgtggcg gagggaagct gccgcgtggt ggaaacgatt tttgaaaacc gctttatgca
     6301 cgtccccgag ttgaatcgaa tgggggcgaa cattacaacc gagggcaata cggcatttgt
     6361 gcagggtgtg gaacagcttt ccggcgcggt cgttaaggcg acggatttgc gtgcgtccgc
     6421 cagcctcgtt atcgccggtt tggcggcgcg aggcgaaacc gtggtcgaac agatttacca
     6481 cttggatcgc ggttatgaaa atattgaaaa aaaactcggc agcgtcggcg cgaaaatcga
     6541 gcgcgtatcc ggctgatcgg gttgcgatgc cgtctgaagc cttcagacgg catcaattgt
     6601 ttctgtatcg caaacactga ttgaaaagga ctgattatgg catttttaaa actgaccgaa
     6661 caaaacgtgc agggcaaaac cgtcctcatc cgcgccgata tgaacgtgcc gttcaaagac
     6721 ggcaaaatca gcgacgacac ccgtatccgc gcctcgctcg cgtccatcca atactgcatg
     6781 gacaacggcg catccgttat cgtgatgatc cacttgggtc gcccgactga aggcgagttc
     6841 caccccgaag acgacgttgc gcccgttgcc gcgcatttgg gcggtctgtt gggcaaagac
     6901 gtgaaagtat tgaacgactg gcgcgaaaac aaaccggctt tgaacgcggg cgatgtcgtg
     6961 atgctgcaaa acgtgcgtat caacaaaggc gagaagaaaa acgatttgga actgggtaaa
     7021 gcctacgctt ctttgtgcga cgtgttcgtc aatgacgcgt tcggcaccgc gcaccgcgcc
     7081 caagcttcga ccgaagccgt cgctcaagcc gcgcccgttg cctgcgccgg cgtattgatg
     7141 gcgggcgaac tcgacgcttt gggcaaagcc ctgaaacagc ccgcgcgccc gatggttgcc
     7201 atcgttgccg gcagcaaagt gtccaccaag ctgaccatcc tcgaatcgct ggcggataaa
     7261 gttgaccaac tcatcgtcgg cggcggtatc gccaacacct tcctgttggc ggaaggtaaa
     7321 gccatcggca aatctttggc ggaacacgat ttggtggaag aatccaaaaa aattatggcg
     7381 aaaatggcgg ccaaaggcgg ttctgtgccg ctgccgaccg atgtcgtcgt tgccaaagcc
     7441 tttgccgccg atgccgaagc ggtcgtgaaa gacattgccg acgttgccga agacgatatg
     7501 attttggaca tcggtccgaa atccgccgcc gagcttgccg aactgctcaa agccgcaggc
     7561 acggtcgttt ggaacggccc tgtcggcgtg tttgagtttg accaattcgc aggcggcacg
     7621 aaagctcttg ccgaagccat tgcccaaagc aaagcattct cgattgcagg cggtggcgac
     7681 acgctggcgg cgattgctaa attcggcgtt accgaccaaa tcggctatat ttctaccggc
     7741 ggaggcgcgt ttcttgagtt cttggaaggt aaagagttgc ctgccgtagc cgctttggaa
     7801 aaacgcggcg cgtaagcggt ttgatataaa aaatgccgtc tgaaacgttg tgctgtttct
     7861 gacggcattt ttgtgtggcg attattgtgc tttggctgcc cattccgccg gagtggcggc
     7921 aaccgaaatg gaaagtgcgt gcagttcgtt actttccagt tgggctttga gtccgtcttt
     7981 aatcaggcgg tggcgcgcga ggcgtgcctt gccttcaaat tctgatgaaa cgatgacggc
     8041 gaaaaaatgg tgtccgtcgc cttctacttt gatatgttcg cattttgcca cgtcttcaat
     8101 catggctttt acttgttccg gggtcagcat ggtaggttcc ttgttggaaa aatgcgccat
     8161 tatactggca aattgaaatg ccgtctgaaa cgggttcaga cggcattttt gacggtgttt
     8221 tattttttgg ctttgaagcc gagcaggtgc tgggtggtgg caagccacgc gccgaatacg
     8281 cccaacgcga tgacgaagcc gaacaccagc acgatttctt cagggtaaaa gaaacgccag
     8341 ccgatgttca agccgtaggg tttgaaaatg gcatcgacca atgggcgcac ggcagagagc
     8401 agccaaccgc aaagccccaa gctgacggcg gcggaaagga tgctctgcca cattgcctga
     8461 taaaggaagg ggcggcggat aaacgacgcg ggcgcgccca agagtttggt gatttcgatt
     8521 tcttcttttc ggctgaggat ttgtaggcgg atggtgttgt gcgcgacaag gacgaacgcc
     8581 atccccagcg tcagggaaag aaaccataaa attttgcgga tgaactcgtt gatttggtac
     8641 agcgtttgca cccattcggt atccatagac gcggattcga ccataggcag tttggtaatg
     8701 tctcggtaga ttgcctgcat ttgggcgggc gtggttgccg ggtcgggggt aacgataaag
     8761 acatccggca gggggttgcc gtcaagcatg gaaatcagat tttggtcgag attggactgt
     8821 aattcttcca gaccgtcttc tttgccgatg aagcggatgt tgtcgagccg tttgtcgcgc
     8881 gccagcaggc tgcgcacggt atcgctgtcg ctttgtgcgg cggcggtttc catatagatt
     8941 gtgatttgcg gcgactcgtt gagtttgccc aacacgcttt gcccgctttg gatgcccaaa
     9001 tacataaaca gcggcagggt catggcgacg gcgagcatta tgagggtaag cagtgtgccg
     9061 aaaggttggc gcagaagctg tttgagcgcg gtgcgcgcgg attcgacgtg cagcgagagg
     9121 tagtggatga tgctcatgcg agtcgtcctt tcgagaggcg caggatgcgg tgtccgtagt
     9181 ccgccatcag ggtttcgtca tgtgcggcga cgatgacggt tgttcccgct tcgtggaagg
     9241 ttttgaacaa ttccataata tcgagcgcgt aggcgcggtc gaggttggcg gagggttcgt
     9301 cggcaatcag caggccgggc tggtgaacga cggcgcgggc gatgcacagg cgttgttgtt
     9361 caccgccgga gagggttacg ggatcgtcca attctcgtcc tttcaggccg actttttcga
     9421 tggcgatgcg ggcacgctct tcggctttgc gcggcggata gccgataatc cgaagcggca
     9481 ggatgacgtt ttgcaggacg ttgcggtcgt agaggatttt gtggtcttgg aacacgatgc
     9541 cgatgtgttg gcgcataaag ccgatttggt tgtcggacaa tgtgccgagg tcctgcccgt
     9601 taaacaggat tttgcccctg cttggtttgg taatgcccga aatcagcttg aggacggtgg
     9661 atttgcccga accggagtgt cccgcgataa atatcatttc gcctttgttg atttggaagc
     9721 tgacgttttt cagggcttca aaaccgccgg gataggtttt ggaaacttgt tcgaaacgga
     9781 tcataggagg tcctgtaagg aatgggcggc atatcgtttc gggcggttgc gtccgcaggg
     9841 atatgccgtc tgaacaatag gtaagacagt gccgattata aagattccgc ctgtttttag
     9901 atagtggata agtttggcgg ataccgaagg tcgggcggga aaaatgccgt ctgaagcgga
     9961 ttcagacggc atccggcgtt taacggcatt ttgaatgggc gagtttgacg gcttcggtca
    10021 ggcttttttc gttcacttcc ccggtaatgg tctgcctgta tccgcatttc ggtgcttcga
    10081 cgacggtaaa gggcagtacg ccgacagtgt ttccgtaggt tttcataaag tttcggctgt
    10141 tcgccccagt gtaacgccaa atcgggtaag aaacaggggt ttgcttgagg aagttgccga
    10201 tattgtcgga tgtgtcgagc gcgatgccga ccatatcgac gctgcctttt ttctgcgctt
    10261 tgtaccattt ggacatggca ggcatctctt ttcggcacgg accgcaccag gtcgcccaaa
    10321 ggttgacgat gcggacgggg gctttgagcg attgcaggct ttgcgcggca ccgtctttcc
    10381 atccggccag ttcgtctgcc gaggcggtat gtgcggcaaa tgtggcgcca agggtgattg
    10441 cggcaagatt caagtatttc atcgttttgt cctttgtatg tcgattcggg tattgtaaac
    10501 cgtttggtac ggttgtaggc gggatattga gtaaaaccct gtgtaagccg ataataaggg
    10561 gattgtcgag aagtaaggaa atgtcatgtc tgaaatcaaa attttccaca atccgcgttg
    10621 cagcaaatcg cgtgccgcct tgtccctatt ggaagaacgc ggcattgctg ccgaagtggt
    10681 caaatatttg gatacgccgc ccgacttgtc cgaattgaag gatattttca acaaattggg
    10741 cttggagtcg gcgcgcggga tgatgcgtgt gaaagatgat ttgtacaagg aattgggttt
    10801 ggacaacccc gatttggaca ataacgcact gctgcgtgcc atcgccgatc atcccgccct
    10861 gttggagcgt ccgattgttt tggcaaacgg taaggcggct gtcggcaggc cgttggaaaa
    10921 tatcgaagcg gtattgtgaa caaacggctg ttttgcagcc gcaacggctt gcgctattac
    10981 ctgttgggcg gtttctgttt gagtgttttt ccgcttttgc tggtgtttac ctcatccgtt
    11041 tgggcggttt atcggacggg cgggcaggtt ttgccgccgt atgtccgggc ggatgccgcg
    11101 ctggtgttgg gtgccgccgc atgggacaaa cgcccttccc ctgtttttcg ggaacgcatc
    11161 aaccacgcca tcgcgcttta ccaaagccgc agggtaggca aaatcgtgtt tacgggaggg
    11221 cgaaccaaaa aaggctatat gaccgaagcc gaggtcgggc ggcggtacgc gctcaaacag
    11281 ggggttccgg cgcgcaacat cctgtttgaa aacacttcgc gcaacactta tgaaaacctg
    11341 aacaacatcc gtccggtttt gcgtgccaac ggtattgcca gcgtggtgat tgtcagcgat
    11401 ccctaccatt tggcgcgggc ggcggaaatg gcggaggatt tgggtgtccg cgtttatatg
    11461 tctgccaccc cgaccacgcg gtttgatgcg ggaaataaga aaaaaatctt tatgctgcaa
    11521 gagggatatg cgttatccct ctaccgtttg gaaaaatggg gcagccgctt tttgggatgg
    11581 ctgtctgatt gaagcggtag aaaatgccgt ctgaaactta tccgcaggca gggttcggac
    11641 ggcattttta atgcccaagc acggtaaaaa cagtaaaata agccgtttta aagattttgg
    11701 agccatcatg accgtcaaaa cccgtttcgc ccccagccca accggctacc tgcacatcgg
    11761 cggcgtacgc accgccctgt tttcttgggc gtttgcccgc catcataaag gcgaattctt
    11821 attgcgcatc gaagacaccg acttggcgcg ctctactgcc gaatccgtca acatcatcct
    11881 cgacggcatg aaatgggtcg gactcgatta cgacaacgcc ggcaacgtcg tgtaccaaac
    11941 ccgccgtttc gaccgctata aagaagtcat cgccgaactt ttagaaaaag gcgatgccta
    12001 ctactgctat tgcagcaaag aagagttgga agccatgcgc gagaaagccg aaaaagaagg
    12061 cacggcgact tacgaccgcc gctggcggcc ggaagcaggc aaaaccctgc ccgaaatccc
    12121 tgccggcgtg caacccgtcg tccgcttcaa aacgcctttg gatggcgtaa ccaagtggac
    12181 ggacttggtc aaaggcgaaa tctccatccc caacgaagca ctcgacgacc tgattatcgc
    12241 ccgcgccgac ggcacgccga cctacaactt ctgcgttgtc gtggacgact acgacatggg
    12301 cgttacccac gttatccggg gcgacgacca tgtgaacaac accccgaaac aaatcaacat
    12361 cttaaaagcc atcggcgcta ccctgcctga atacggccac ctgccgatga ttcttaacga
    12421 acaaggcaaa aaaatctcca aacgcagcgg cgataccgtt gccattaccg atttcggcgc
    12481 gatgggcatc ctgcccgaag ccatgctcaa ctatctggca cgtttgggct gggcgcacgg
    12541 cgacgatgag ttcttcacga tggaacaatt tatcgaatgg tttgatttga aagacgtttc
    12601 tccatctcca agccgcatgg atttgaagaa actctactgg atcaacggcg aacacatcaa
    12661 aatcacgccc aacggcaaac tcgccgaact cgtcaaaccg cgtctcgctc tgcgcgatat
    12721 ccatgaaact gaaaaacctg cattggaaga cgtgttggca ctggtcaaag accgcgccca
    12781 agacctgaac acacttgccg acgagtgcct ctacttctac gtcaaacaaa cgcctactga
    12841 agcggacgtg cagaaacact gggacgatga agccgccgcc cgtatgctgc gctttgccga
    12901 acgcctcgaa gggctggaag actggaatgc cgaagccatc cacgacctct tcaaaccctt
    12961 ctgcgacgaa gaaggcatta aaatgggcaa actcggcatg cccctgcgcc ttgccgtctg
    13021 cggtacggcg aaaaccccca gcgtcgatgc tgtgttggca ttaatcggca aagaagaagt
    13081 gttgaaacgc atccgcgctt aagttatcca caggcgtggg cgatgccgtc tgatgtcgga
    13141 atgcggcttc agacagcatt caaacggaag ttgaacatga aaaaaatatt gtattttctg
    13201 atgtttgttt tttctacaag cgtatgggcc ggggatgcgg aagacaatct gctcagcatc
    13261 caatccggct atcgtgcctt actgcaaaaa caaaacaatc tggacggaaa aatcatcggg
    13321 atgcagtcgg atttggaaga tgcgcgccgg cgtttgcaga cggctcaagc agacatcgcc
    13381 cgtttggaag cggaaattcc tgcagcaatg gcgcaaaaag cccggcaggc tgaagagctg
    13441 aggcaaatcg gagtgcgttt ggactatgct tggaatgcgg tttacggcgc agggggaacg
    13501 aaagcgtcgg ggaattgacc gatgaattcc ctctttgtgg acaatactgt tttcattaca
    13561 cggctgaaag ccgggcatat cggcaggttg gttcaggcgt tgtttgagga gtggcacgga
    13621 tttgaaccgt ggtcttctgt ggataagatt catgcctatt acggcaggtg tttgaaggat
    13681 gacgaactgc cgctggcatt tgcggctgtg gatgatttcg gaaccctgtt gggttcggct
    13741 gcggtcaagc ggcatgatat ggaaagtttt ccacagtatg aatattggtt gggtgatgtc
    13801 tttgttttac ctgaatatcg cggaaaaggc attggcagga ggctggtcgc ccactgcata
    13861 ggcgcagcgc gttcgctggg gataaagttc ttgtatcttt atacgcctga tgtgcaaata
    13921 ttttatgaat cattcggctg ggcggttgtc gggcgacatt tccataacgg tgaatgggtt
    13981 acggttatgc gtttggatat ggataaggtt taagccgaat ggacaaatgc cgtctgagct
    14041 gttcggacgg catttttatg tttggaaact tcttgtcaga taatgtttat ccacagattt
    14101 ttccatatgg tttgatgctg ttccgacaac ggaaattaag atacggattt gcacaaatct
    14161 ttcagacggt acagttctga caatgcttcg cgcggggtca ggctgtcggg atcgagtttt
    14221 tccaaggctg ctgccaatat accttcaaaa tgtttttcct ctgctttatc cacaaagttg
    14281 cccacattcg gttcatctcc tttttcagac ggcatggtac tgaaaatatc cagttgggga
    14341 cggttcgcgg cggcttggtt ttccagtccg ttcaaatgct tttgggcgga tttcaatgcg
    14401 cgtacaggca ggccggcgag tttggcaacg gcgatgccgt agctttttcc ggcgggaccg
    14461 ggttggattt ggtgcagaaa cacgatgtcc tgtccctgtt cgagcgcgga aaggtgcata
    14521 ttgagtgcgg cggcgtgggc ttcgggcagg taggtcagct cgaaatagtg ggtggcaaac
    14581 aggctgaagg atttgttttt ttgcagcagg tgttcggcaa cggcgtgcgc gagggcgagg
    14641 ccgtcgaaag tggaagtgcc acgtccgact tcgtccatta aaacaaggct ttgttcggtg
    14701 gcgtgatgca ggatgtaggc agtttcgctc atttcgacca tgaaggtgga gcggttggag
    14761 gcgaggtcgt ccgatgcgcc gatgcgggtg aagatttgat cgatgggccc gattgtggcg
    14821 gcatcggcag gcacgaaaca gccggtgtgt gccaataaaa caatcagcgc gacttggcgc
    14881 atgtaggtgg atttgccgcc catattgggg ccggtgagca gcatgaggcg gtgtttgtgg
    14941 tcaaggtcgg tgtggttggc ggtgaagtgg cgtacctgct gttcgacaac gggatggcgg
    15001 ccgttttcga tgtggataac cggatagtcg gcaaactcgg ggcggacgaa gttccgctct
    15061 tttgccaagg ctgaaaatgt ggacaatacg tccagcgcgg cggcggcttt ggcggctttt
    15121 tgaagctgcg gcaatgccgt ctgaaggttt ttcaatacgc cgtcaaagag ttgtttttct
    15181 aaggcgaggg cttgctcttg agcagtcagt actttgtctt caaaggcttt cagttccggc
    15241 gtgatgaagc gttcggcgtt tttgagggtt tgccggcgtt ggtagtcggc aggtgcttgt
    15301 tcggcttggg ttttggacaa ttcaatgtaa aagccgtgaa cgcggttgaa ctcgactttg
    15361 agtgtggaca aaccggtacg ttcgcgttcc ttggcttcca aatccagcaa aaattcgtcg
    15421 ccatggtttt gaatgcggcg caattcgtcc agttcgggat gaaaaccgtg gttgatgaca
    15481 ttgccgtctt ttagccagac ggaaggttcg ggcaaaatgg cttggcggag ctgttcggct
    15541 gtggataggt tttccgggaa aacggctttg agggtttcca acaggctgct gccgtttgtg
    15601 gacaagtcga tttctgacag ggcaaacagg ctgtcgcgca gggcggcgag gtcgcgcggg
    15661 cgggcgttgc cgacggcgat gcgggcagca atgcgttcaa tgtccgcaat gtttttcaga
    15721 cggcattgga ggggttcgta ttggctgtcc agcgcggtta cagcttcttg gcgggcgcgg
    15781 atgtgggcgc ggttgcgcaa agggtggtgc agccagagag ccaagaggcg gctgcccatg
    15841 tgggtggtgc aaaggtcgag cgtggacatc agggtcggcg attttttgcc ggagagggtt
    15901 tgcgtgattt cgagattgcg gcgcgtggcg gcatccatac cgatatattg gctgtcggtt
    15961 tcgagcgaca ggccgtccaa gtgttgcggc atcaggtttt gcgtcaggcg gatatagttc
    16021 aacagtgcac ctgccgcgcc aatcgcaacg gcgtgttctt tgccatccaa accgaagccg
    16081 cgcaaatcct ggcagccgaa atattccgtc agcagttttt cccccgcgtc ggcggcaaac
    16141 tgccacgcgt tcaggcgcgt aacacccgat gccgtctgaa gttgcggtgc gtttttactg
    16201 tcaggcaaca gaatttccgc cgcctgcagg cgcgccagtt cgtcgtccaa tttatccaca
    16261 gtcgtcagct tggttttgaa ttcgccgctt tgcagcgatg cccacgccaa accgatgtat
    16321 tttttgtcgg gggacacggc aacgatgcgg ttggtttcct tgtcttccag caatgcggaa
    16381 tcggttagcg tgccaggcgt tacgatgcgc acgactttgc gttccaccgg ccctttgcct
    16441 gcgccgactt cgccgacctg ttcgcaaatc gccacgcttt tgcccaactt gaccaggcgc
    16501 gccagatatt gttcggcggc gtgaaacggc acgcctgcca ttttaatcgg tacgccgtcc
    16561 atctgcccgc gcgtggtcag ggtaatatcc aaaagttttg ccgcttctac cgcatcgtcg
    16621 aaaaacatct cgtaaaaatc gcccatacgg taaaacacca gtttgtcggt atgttgcgct
    16681 ttgatgccga ggtattgctg catcattggg gaaacggcgg atttggacat ggggctgcct
    16741 tatcattagg aaaacggtat tgtagcaaaa ggttttgtct tcgacggaat gagactgacc
    16801 gtaagcctgt caataaagtt gtggagacaa gtaggaaaac agcaaagtta tccacaggaa
    16861 tattattaag tcaaaaaaca tccacgttta tctgtcctat acggcaagcc ttaaactcaa
    16921 acttatttga cgaaaaggta atgaaaatat tggatatttg caacttatac acaagcagat
    16981 ccgcaatcat caaaatcatc attaaaattt taaattcaaa tattgatggt aaaagttttg
    17041 gaaatctgtg caaacagtaa aattcatcta tatcaaataa gcatcaagta gttagatgta
    17101 atagtggaat gtaactttat ttcagaatac aatacagata ttgaaatttc gtttcacagc
    17161 ttggagtata tacatgagca ttaaagtagc gattaacggt ttcggccgca tcggccgcct
    17221 cgcattgcgt caaattgaaa aagcccacgg catcgaagtc gtcgctgtca acgacctgac
    17281 ccctgccgaa atgctgctgc accttttcaa atacgacagc acgcaaggcc gtttccaagg
    17341 tactgccgaa ttaaaagacg atgccatcgt ggtaaacggc aaagaaatca aagttttcgc
    17401 caatccgaat cccgaagaat tgccttgggg cgagttgggt gtggatgtcg tcctcgaatg
    17461 taccggcttc tttaccaata aaaccaaagc cgaagcacac atcagggccg gcgcgcgcaa
    17521 agtcgtgatt tccgcaccca gcggcaatga tgtgaaaacc gtcgtatatg gcgtgaacca
    17581 agacattttg gacggcagcg aaaccgttat ctccgctgct tcctgcacca ccaactgcct
    17641 tgccccgatg gcggcagtcc tgcaaaagga attcggcgta gtcgaaggcc tgatgaccac
    17701 catccacgcc tacaccagcg accaaaacac ccttgacgcg ccgcaccgca aaggcgattt
    17761 gcgccgcgcc cgcgccgccg cgctcaacat cgtgcccaac agcaccggcg ccgccaaggc
    17821 catcggtctg gttatccctg aattgaacgg caaactcgac ggctccgccc aacgcgtccc
    17881 tgttgccacc ggctcgctga ccgaattggt ttccgtcctc gaacgccctg taaccaaaga
    17941 agaaatcaac gccgcgatga aagcagccgc cagcgaatct tacggctaca acgaagatca
    18001 aatcgtttct tccgacgttg tcggcatcga atacggctcg ctcttcgatg cgacccaaac
    18061 ccgcgtgatg accgtgggcg gcaaacaatt ggtgaaaacc gttgcctggt acgacaacga
    18121 aatgtcctac acctgccaac tcgtccgcac tttggaatac tttgcaggca aaatctaagg
    18181 cttgaacaaa cctgtggata agtaaatgcc gtctgaacac attgcgttca gacggcattg
    18241 tttatctgta t
//
LOCUS       DAWKOX010000024        17819 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.024, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000024 DAWKOX010000000
VERSION     DAWKOX010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17819
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.024"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(224..1417)
                     /locus_tag="WJK78_000588"
     CDS             complement(224..1417)
                     /locus_tag="WJK78_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ7597546.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKIRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQIQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(1414..2397)
                     /locus_tag="WJK78_000589"
     CDS             complement(1414..2397)
                     /locus_tag="WJK78_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ7597547.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGVALQENAYALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGET
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            complement(2408..3844)
                     /locus_tag="WJK78_000590"
     CDS             complement(2408..3844)
                     /locus_tag="WJK78_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ7597548.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFSWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLGGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RALNIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRDALCRLKYLAPLSWFVTFHFVCLSFVVFNTANPD
                     DAGAVFSALFANASGWNAPQQADMLLLASFASVMLLYPYLQRAFDGVVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            complement(3972..4127)
                     /locus_tag="WJK78_000591"
                     /pseudo
     CDS             complement(3972..4127)
                     /locus_tag="WJK78_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
     gene            4473..4685
                     /locus_tag="WJK78_000592"
     CDS             4473..4685
                     /locus_tag="WJK78_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HEZ7597549.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            4833..6416
                     /locus_tag="WJK78_000593"
     CDS             4833..6416
                     /locus_tag="WJK78_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ7597550.1"
                     /translation="MSSKKKKAAFARAATENGVPDVSNIKNSYDDLMYESGAFSQTAI
                     NNLEARARLMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIERMGLENVRLEEKDILTIDESFGKFDYIIVHGIWSWVPDTVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLRDIMQFSSRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLGGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDTNLH
                     VSFVSWMAEHTRERILALAGDDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDILLSGIRDVMKTGEAFKTEDVAENLDRRFPGLEF
                     DRMKINSQLLLQTILGRFSVSSDNAGKPFFEDHKTYVPARFTDYAAAFVEHGAEAFVR
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            6498..7595
                     /locus_tag="WJK78_000594"
     CDS             6498..7595
                     /locus_tag="WJK78_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ7597551.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTGLGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANTIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQENIPSYAEALKREGHNPFFSA"
     gene            7709..8824
                     /locus_tag="WJK78_000595"
     CDS             7709..8824
                     /locus_tag="WJK78_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ7597552.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     ACGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIIGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            8949..9404
                     /locus_tag="WJK78_000596"
     CDS             8949..9404
                     /locus_tag="WJK78_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ7597553.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RSEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            9475..9951
                     /locus_tag="WJK78_000597"
     CDS             9475..9951
                     /locus_tag="WJK78_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ7597554.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            9939..10865
                     /locus_tag="WJK78_000598"
     CDS             9939..10865
                     /locus_tag="WJK78_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ7597555.1"
                     /translation="MSEMKKTKVHLISGFLGTGKTTALKSLMEQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLAASKTD
                     LCTPEQLVEFHDKAAKLFPPKAKVVEVRNAQLDIQWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            10930..11484
                     /locus_tag="WJK78_000599"
     CDS             10930..11484
                     /locus_tag="WJK78_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7597556.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDNTIFHRVIGGFVIQGGGLTEDLAQKASDKAVANESGNGLKN
                     TVGTIAMARTTDPDSATSQFFINLADNDSLNYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVE"
     gene            complement(11563..11667)
                     /locus_tag="WJK78_000600"
                     /pseudo
     CDS             complement(11563..11667)
                     /locus_tag="WJK78_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11723..12682)
                     /gene="ttcA"
                     /locus_tag="WJK78_000601"
     CDS             complement(11723..12682)
                     /gene="ttcA"
                     /locus_tag="WJK78_000601"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ7597557.1"
                     /translation="MSKKIKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQSLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(12775..13638)
                     /locus_tag="WJK78_000602"
     CDS             complement(12775..13638)
                     /locus_tag="WJK78_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ7597558.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKVVFEILEDYAVGAEL
                     EASAEPLAAQEPSLVFTAECVSDGICSVVLPHRGILHIAPETALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEEAGIVLDSVQDSENFTALTVIKFSAAQKELTVPNGGIFKA
                     VHLFFKTENAE"
     gene            complement(13673..14035)
                     /locus_tag="WJK78_000603"
     CDS             complement(13673..14035)
                     /locus_tag="WJK78_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ7597559.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            14110..14589
                     /gene="ybaK"
                     /locus_tag="WJK78_000604"
     CDS             14110..14589
                     /gene="ybaK"
                     /locus_tag="WJK78_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ7597560.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGNGLIVLMHGDKQISTRNLARHLGAKRIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            14611..15333
                     /locus_tag="WJK78_000605"
     CDS             14611..15333
                     /locus_tag="WJK78_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEZ7597561.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            15335..16210
                     /locus_tag="WJK78_000606"
     CDS             15335..16210
                     /locus_tag="WJK78_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7597562.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWWLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(16282..17679)
                     /gene="aspA"
                     /locus_tag="WJK78_000607"
     CDS             complement(16282..17679)
                     /gene="aspA"
                     /locus_tag="WJK78_000607"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ7597563.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGKLGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLAVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
BASE COUNT         4131 a         4384 c         5099 g         4205 t
ORIGIN      
        1 acggaaggcg gcagtttatc atctttgcct tcagacggca tatcaaacgc cgcctttgcg
       61 ccgtatgccg gaggttcgcc cccgtccttc cgatgcttga ggcgaatgcc ggttgcgtcc
      121 ggcaaaccgt gcgcggggtg gctatgccgt ctgaagcaat atgaaggtat gcgtttcaga
      181 cggcatcccc ctgttgcgga aataccgtcc gcctcctgtc cgattattgc ctgattgcag
      241 cggcgcggac gagttcttcg aggctgtcgg cgagcatttc cgccgcgcgc cggtagcctt
      301 tggcggagaa gtgtacgccg tctttggcgg cccatccttg gttgagccag tttttcatgc
      361 tgcatatgcc gcccatggcg ttttgccaag accagaacat ggtttgtccc tgccgggcga
      421 cgcgccgctg tatctgttgg acttcggtca ggcggacggg gcgtgtgccg catacgccga
      481 gcgtgttttt cagggattcg ggtgcgccga tgatgaggat gccggcggca ggcaggctgt
      541 cgcggatttg gcggacggta tccagccatt tttgttcggt gtcggcaatg tcgatgttgt
      601 cgccgaaggc ttcgttggtg ccgtaggaaa ggataaccaa atcggcgccg gtttgggcaa
      661 ggtcgttcat acggtcggca cgccatttcg accaatgggt caattgtgcg ccgttgatgc
      721 ccatggcgga aacggtaatg ccgccggcgg gattttcgat gttgatgaag ccgatgtccc
      781 acggcatttc ggtctgtatg gtcaagggca gtgccgcgcg ggtatccagt acctgccagc
      841 cgccgccgtt ggcggagacg gtgttgccgt tgacggtcag ggtttgttcg gcgagcaggg
      901 gtttggcaaa cagggaaatg cgctgtttgc cggtcttgcc gtccgatgcg gtcagggtca
      961 tgctgccgcc gctgccggtg tgggcgagga tgccgccgag cgggaagtct ccgctattgt
     1021 tcctgctggt gaggctttgc cagttgccgt tgtgccggac tgccgccatg cgctgccctt
     1081 tgacgttggc ggggtaaacc cagcctatgc cgccgtcgcc ccaagttttt tgcaggcgtt
     1141 tgcgcaggct gtcggtaaag aagtcgccgg cggtatgcga gtcgccgatt tgcaggatgc
     1201 ggaaggtctc gccgctgcct tgtgcgacgg atcggatttt tttcatccaa ggcgaggcgg
     1261 cggcgttgcc gtagtcggtc aagagcccgt ttgtatcggt gtagggggcg gacggggaaa
     1321 cggtaacggt gtcgaggctg acggaggcga cgggcagggc ttctgcctgc gtggcggcga
     1381 acagggcgga aaatgcgatg aggtgtttgg ggttcatggc tgtgtacttg atggttgcgt
     1441 acttggttca aaaacgattt tttccattat ttttgccgcc agcagttttt gtccttcggc
     1501 ggtaaagtgt atgccgtcct tgctgcggta gcggacgggt ttgccgttga cgttgacgga
     1561 gtcggtgtag cggtcttccc cgccgctcag ggtgtgcgcg gtgggaatca ggatgatttt
     1621 gccttccagg tgttccgaaa gcagtttgtc gaggtagcgc atctgcccgt cgagcttggc
     1681 ttttttcata taggggatgc cgagccagac gacttggacg cggtgcgtgt gtgcggcttc
     1741 aaggatgcgg tcgacgcgtt tcaggtattc ttgcgcccat tcgtcggaag cgaatttgag
     1801 gtatcgtttg ccgacgggga aatcccacgg gtcgttcggg ccgaggaaga cggcgagcac
     1861 gctgatttcg ggatgttttt tcagggtttc ttcaatcgtt ttcggccagt cgaagaatga
     1921 ggggtaggac agccccgtgc tttgtttgct gaggttgacg gattcgatgc cgtattgctg
     1981 tttcaggctt ttttgcacga agggtgcaac gccctgcatc agcgagtcgc cggcaaaaaa
     2041 gactttgtcg ccgctgcgga cggcggcggc ttcggtgtct tgtttccatt ctgtttcacc
     2101 ggtttgaggg acggcttctg atgcggcggc ttcagacggc atatctgccg aaccgccgtc
     2161 ttgagccgtc ggcggcgttt cgccggacag gaaggctttg atgccgtctg aaagggcgta
     2221 ggcgttttct tgcaacgcca caccgctccg ccaccatccg taggcggcga gcggttcgag
     2281 cgggctgttg cggtggtagg tctgctgcca gtaggcgttg atggggtttt ggctgaacca
     2341 cacggcaatc agggcagaca tcaatatgga ggcgaaaagg gaaagaaagt ttttcatgtc
     2401 caaaccctta aaaattggca taaataaagc cgggtatccc cgagggggcg aggacgataa
     2461 tcagcagcag gacggcggaa acggggataa accacagcca catcgggatt ttttccaaac
     2521 ctttgaccac gccgtcgaaa gcgcgttgca ggtaagggta gagcagcatc acggatgcaa
     2581 acgaggcaag cagcagcatg tctgcctgtt gcggcgcatt ccagccgctg gcattggcaa
     2641 agagcgcgct gaaaaccgcg ccggcatcgt cggggtttgc ggtattgaag acgacaaagc
     2701 taaggcagac aaaatggaag gtaacaaacc acgagagcgg cgcaaggtat ttcagacggc
     2761 atagcgcgtc gcgtccgaaa taacggtcgc ccgtgttgag cagcaccagc gccgtgccgt
     2821 gcagcgcgcc ccaaatgagg aagttccagc cgtagccgtg ccatatgccg gagagtacca
     2881 ttgccgccat caggttgagc tgtgtccgta aaaagccttt tttgctgccg cccaagggga
     2941 tgtagatgta gtcgcgtatc caggtggaaa ggctgatgtg ccatttgtcc caaaatgcgc
     3001 ggatgtttaa agcacgaagc ggtgcggaga agtttttggg cagccggaaa cccagcagca
     3061 tcgccatgcc gataaccaaa tcggaatatc cggaaaagtc taaaaagagt tggaaggtat
     3121 agccgtacac gccgcccaat acgccccagc cgtcgaattg ggcgggattt tcaaatacgg
     3181 gcgacaccca gttttccgcc agcatccccg ccagccacca ttttttggca atacccagca
     3241 gaatcaggga aacggcgagt gcggggcgga cgggtgagcg cggttggcgg gtacggattt
     3301 gcgccaatgc gcccgcctgc tcgccgtccg cgcttttgaa tgcggcggcg cggataatcg
     3361 ggccagaggt aacggtggga aagaaactca ggtgtagtag cagctcgtgc cagctgaaac
     3421 gcgcagcgtg cggggcgcgg aagcagtaaa ccagataggc gagcgactgg aaggtgtaat
     3481 acgaaagccc cagcggcatc aggatgtcga ttgcgccgcc ttttccggca tattgggcaa
     3541 tcagcgggcg gaaaaagtcg aaatatttga aaaagcccaa gacggtcagc gagacggcaa
     3601 tgccgcaccc cagccaaaag cggcgcgtat tttcgcgatc ggaacggagc agttcgccca
     3661 aaaggtacac gcaggaggaa taaaggacga cgattgccgc aaatacgggg ccgatatggt
     3721 agagccagcc cataccggca gccaaaagca gcaggttttg gacggacggg tatttcgcca
     3781 agccccagta aatcggcagg aaggcgagaa agaacagtgc gaactcgaca gacagcagcg
     3841 gcataaacca tccttggaac aaaaaatagg cgttaaaaca cggcaaagcc cgttatttta
     3901 agcaggggtg gatatttctt caatcaaaat gccgtctgaa gggcgggaga ggcttcagac
     3961 ggcatcgcgg gtcaggttcg gatatggcgg ttcaagttca ggcacagcca cagcccggcc
     4021 gccgccgcaa gcataccggc gatgccgata cgggaaatac cgacatattg cgttacccaa
     4081 tgtcccaaca gtgcgccgct gccgataccg acgttgtata gtggattaac aaaaatcagg
     4141 acaaggcgac gaagccgcag acagtacaaa tagtacggaa ccgattcact tggtacttca
     4201 gcaccttaga gaatcgttct ctttgagcta aggcgaggca acgacgtact ggtttttgtt
     4261 aatccactat aaatgcgccg attgccaagg cgatgatgct caaccagggt ttttgcgaag
     4321 cgttcattgt tgtcgtcctg atgggaattg ccgccattat gcgcaagcgt ccgtcttttt
     4381 ccaaaccgcc gcaccgtttc cgcgtttgcc caagttcacg ccccgactta caataacgcc
     4441 cgtcagattg cagttccaac gaaaggaaaa tgatggaaac ccttatcctc gacatcggcg
     4501 gcatgagctg cggcggctgc gtcaaaagcg ttacccggat attggaaggc gtaaaaggcg
     4561 tggcaagcgt cgaagtcagc cttgaaaaca aaagtgcgac cgtcggatac gaccccgcgc
     4621 aaaccgatgc aggggcgttg attgaagccg ttgaagacgg cggctatgat gccgcgttga
     4681 aataaagcgg caaaaatgcc gtctgaagcc ttcgcgcctc ctagatgccg tctgaagtac
     4741 gctccgcgcc ttcagatggc atttgattta gttgaacggg taggatgaat tggttaaact
     4801 tgcgggcata ttgtctttag agtgaacaaa atatgtcgag caagaagaaa aaagccgctt
     4861 ttgcccgtgc tgcaacggag aacggtgtgc cggacgtgtc caacatcaaa aattcatatg
     4921 atgatttgat gtacgaatcc ggcgcattct ctcaaaccgc catcaataat ttggaggcgc
     4981 gcgcccgcct gatgggcttg cagcccgcgc ccgccgccaa tgccaaggtc ttggagctgg
     5041 gctgttcgat gggcggcaac atcatcacgc aggcgcttta ttacccggat gcggaatttg
     5101 tcggtatcga cttgtccggc aggcaggttg cgcagggcaa cgccatcatt gaaagaatgg
     5161 gcttggaaaa tgtgcgtctg gaagaaaaag atattttgac catcgatgag tcattcggga
     5221 agttcgacta tatcatcgtc cacggtattt ggtcgtgggt tcccgatacg gttaaagaca
     5281 aaatcttttc gatttgccgg aacaacctga cggaacacgg cattgcctat atttcgtaca
     5341 atgtctaccc cggctggaaa cggcaggagc agttgcgcga tattatgcag ttttccagca
     5401 gggatgtgct tgaagaaccc ttggaagcgc gaacgcggaa aggcttggac gcgctcaagg
     5461 cactggcgga aattttggaa aacgacaagg gcttgggcgg cggcggcaaa cttccggcga
     5521 ttcaaaaaat attgaatcat aatttttatt acatcgcaca cgaatatatg gaggcgttta
     5581 acgacccgat ttacgtcaac ggcttcatcg aatgggctaa ccgccacagg ctcgcatata
     5641 tcggggatac caatttgcac gtgtcttttg tttcttggat ggcggagcat acgcgggagc
     5701 ggattctggc attggcaggg gacgattata ttgccaaaga attttacagt gatattttat
     5761 ccgaccgcca attccgccgt tcgcttttat gccgtgagga agtcggggat actgtcaggc
     5821 gtgatgagtc ggttgccgtc gaagtgatag aaagtttgaa tttccgcccg gcaagagggg
     5881 aaacaatcaa ctttgatgaa aacgatatcc tgctttcggg catacgcgat gtgatgaaaa
     5941 ccggagaggc gtttaaaacg gaagatgttg cggaaaatct cgaccgccga tttcccggtc
     6001 tggaatttga ccgcatgaaa atcaattccc agctgttatt gcaaaccatt ctcgggcgtt
     6061 tttctgtttc atcagacaat gcgggcaaac cattttttga agaccataaa acctatgtgc
     6121 cggcgcgttt tacagattat gccgccgcct ttgtggaaca tggcgcggaa gcgtttgtcc
     6181 ggcctgccaa ccgttacaac gaaagcaccc cctcattcgg atacgggcat ttgtacatta
     6241 tgcggcaatt gtcgcggccg acgagcaaac aggcattgat tgaaacggtt gccgaaaact
     6301 tgaacatcgt cagcaccacg cccgacggtt tgacattcca tccgcctgcc gaagtgtatg
     6361 tggaagaaat attggcagac ttggcagaca ggcattttct cgtttcggcg gattgacggg
     6421 caagtcccgg cggcaatcca tccgatatat tttcagacag gaaagacaca cactacgaaa
     6481 agcggtgcac gacacatatg aaccagacat ttaccttgcc cgatacgcgc ccgtatcccc
     6541 aaaatccgat taaaaaccac ctgctgctca atgcctacca gttggcgcat aattcttccc
     6601 aggcttcgcg caaactctcg tccggccaac ttcaaaccga aatcaggggg atgcttgagc
     6661 aaaaccacta tatcaacctt tccctcgcgc tgacgatgtc gcccgatgcc ggaacttatg
     6721 ccgcgctgct ttccagtgtg aacgcagtac tcgattgcga gaaagaaggc gaagtgcagt
     6781 ggttcgccct gccggtcgtg ctggtgtccg gctgcaagaa agaacgggca atcgagatga
     6841 agctgccgac ggaggcattg tttgcctgcc tgcaaaacta tccgcacctg cgcgcgttga
     6901 cgcaagagac acaatggctg ccttatcttg tgcattcgtc cgatttgagt gcggtcgcgc
     6961 cggatgagtg gtggcgtgcc aaacaaaata ccgaagcggc ggcgcaacac ttacgccgtt
     7021 tcgccccgcg ccctttgctg ttgcccgaag ggcagtccgt ccacgtcgtt tacgcgctgg
     7081 gtttcggcag cggcaaggtt cagacgggat tgggtcagaa ccttcttcag gcaggcctgc
     7141 ccttaatgca ggtatggcag gaaaatcttg catcggaagg tgttacgctg tttgccaatc
     7201 cgctttcccc ggattctccg gtacgcgcgc tttcagacgg cagccacacg cgccagcgta
     7261 tggcgatgga tgtttttgcg gcaaacacga tacgcgccgt ccgtatgcag agtccgcgcg
     7321 tcggcgtggt cgctgcggca aaggcgggcg gacaggtttt attcgggttt aatgcgaccg
     7381 acggcgcgtt cgaagtcgtg ccgcaggtgt tttcgtggca gctttccttt accgacaata
     7441 ttggcgttat tcagcaaaat tttttggatt taatggcaga atgccgtgta gaacacgttt
     7501 acctgttgca caatcctttg ggcgaacagg aaaacatccc gagctatgcg gaagcgttga
     7561 aacgggaagg gcacaatccg tttttcagtg catagtgatt tgtagtagtg ataggctttc
     7621 tcatttctat aataaatcaa aataaagagc acaacacttt ttcattctgt gttgtgcctt
     7681 gagtgaaacg aaaggatgaa ttataaatat gaagattgta attgcaccgg attcgtttaa
     7741 ggaaagcttg acagctcaac aggtagctga agcaataaaa agaggcttcc aacaatcgat
     7801 agcagatgtg gaatgtctcc tctgtcctgt cggtgatggg ggagaaggca ctgtagatgc
     7861 tatccgacat tctcttgacc tagaagaaaa atgtctccaa gtgacaggac cttttggaca
     7921 aaaagaagtc atgcgctatt ttcaaaaaga acaactagcc ctattcgaag ttgctgattt
     7981 ggttggtctt ggaaaaatcc cgctagagaa acgaaatcca ttacaaatcc aaactcgtgg
     8041 tattggagaa ttgattcgcc acctcattag tcaagaaatt aaagaaatct atattggcgt
     8101 tggcggtacg gccagtaatg atggaggtat tgggattgct gctggtttag gttatcaatt
     8161 ttatgatgag gatggaaata ccttgcccgc ttgcggtcaa tccttactaa acctagcttc
     8221 tgtttcaaca gaaaatcgct atgaaattcc tgaagatgtt cacattcgta ttttagcaga
     8281 tgttgtgagt cccttatgtg gacaccaagg tgcgacctat acgtttggca agcaaaaagg
     8341 gttggattct actatgtttg aggccgtaga tcaggcaata caagattttt atgaaaaagt
     8401 ctcccctgca acattaaaac ttaaaggagc aggagctggt ggaggcatcg ctggtggttt
     8461 gtgcgccttt gctcaggcaa gtatcgtatc tggaattgac acctgcctgg acttgattga
     8521 ctttgataag aaagtgtcag atgttgactt ggttatcatt ggtgaaggaa gactagatcg
     8581 tcaaagttta gcagggaaag cgcctattgg tgtagcaaaa agaacccctg tcggagttcc
     8641 tgttgtcgct atttgtggca gtctcgttga agatttgcct tccctgccat ttgaaaatat
     8701 ccaagctgcc ttttctattt tggagaaaag tgaaccttta gaagatagtt tgaaaaatgc
     8761 cagtctctat ttggagcata cggcttctaa tattggacac ttattaaata tgcctaagat
     8821 ttagccaaac catttcttcc agatggatgt tttggctggt tctgccttat gcggttacga
     8881 ttaaccgacc gatgacgtct gaaagggttt ccgcttcaga cggcatcgcg ccggaacagg
     8941 gaggggatat gaaaaaaccg aaaatccttt ttgtctgcct cggcaacatc tgccgttcgc
     9001 cgatggcgga atacattttg cgccgccgcg ccgccgaagc gggcattccc cttgaagcgg
     9061 acagcgcggg gacatcgggc tggcacgacg gcgaagatat gcaccgcgag acggcaaaga
     9121 tattgaaaaa acacggtatc gatgcttcag gctttaccag ccgcaaaatc cgccaaagcg
     9181 atgcggcggc gtttgactgc atcatcgcga tggacggcaa gaatttgtcc gaattggaaa
     9241 gaaccttcgg caggcggtcg gaaaaaatat tcaagctgac cgacctgata cccgaaagcg
     9301 gttacgacca tgtccccgat ccgtggtaca cgggcgattt tgaagaaacc ttcaggcttg
     9361 cggatgcggg ctgtcgggca ttgttggaaa agatttccaa ataaagcaat tgaatacaaa
     9421 tataaaaccg cctcctgccg tatcggttgt tcagacggca taaacagaga atttatgaaa
     9481 acaaatttca aacagaaaat tattgaacag gcacgcagcg aaggcttgca ggtaaccgct
     9541 ttgcgcgagc aggtattaga tattgtcttg cagcaaagcg gcgtgattaa agcctacaac
     9601 gtcttgtcgc agatgcagca gcaaagcgag ggcgtgcttg caccgcctac cgcctaccgc
     9661 gcccttgatt tttgggcgga gcagggcgtt ttgcacaaag tggcggcggt caacggctat
     9721 attttgtgca gccacgcgca gcacgagtgc gacgaccatt gccacgacca cgaagaagcc
     9781 gaagcgcacc acagcgcgtt tattttggtc tgcaccgaat gtggcacggc ggacgagcaa
     9841 accctcagcc acgagtgggc ggcactgcgc gcaggcgttg ccgaaagcgg ctttgcgctg
     9901 aaagaagaac acgttgtttt aaccgggatt tgtaaaaaat gtcagaaatg aaaaaaacca
     9961 aagtccacct gatttcaggt tttctgggaa caggcaaaac caccgcgctc aaaagtctga
    10021 tggaacaaaa agaccccaac gaaaaatggg tcatcatcgt caacgagttt ggcgaaatcg
    10081 gcattgacgg cgcggtattg agcgacaacg gcatccctgt ggcagaaatc gccggcggct
    10141 gtttgtgttg caccgccggc ccgcaaatgg gcgtaaccgt gcagaaaatg ctgcgcgatg
    10201 ccaagcccga ccgcctgatg attgaggcaa gcggactggc gcacgccgcc agcgtcatcg
    10261 acgaactcaa agccaaaccg ctggacagcc ttttggaaat cggcgcggtc tttaccgtcg
    10321 tcgatccgcg ccaattcatc aaccccgatt acgcgcaaca ggcattgtat aaagaccaaa
    10381 tcggcatttg cgacgtattg gccgccagca aaaccgattt atgcaccccc gaacagctgg
    10441 tcgaatttca cgacaaagcg gcaaaactgt tcccgcccaa agccaaagtg gtcgaagtcc
    10501 gaaacgcgca actcgatatc caatggctcg atattcccgt catcgaaaaa tcacgctacc
    10561 gcctcaaagc cctgccggac aacacgatgg gcttccagtc gcaaggtttc acattccccg
    10621 ccggacgcga tttcgacggc gaaaaattga ccaacttctt caatgatttg cccaagatga
    10681 ccgaaggact cgtccgcgcc aaaggcgtgt ttcaagtact cggcacttgg gtgtggctca
    10741 actgggtgga cgggcaatgg ggtgcgaacc aagtctcgtg gcggcgcgat tcgcgttttg
    10801 aattgattgc caaatcgttt gatgcggatt taatcgaaca aaagctcaaa gacgcattgg
    10861 aatagcgttc acgcgccttc agacggcata tgaaatgaaa atgccgtctg aaggtctgag
    10921 gaggacggga tgaaacccaa attcaaaacc gttttaaccg cgctgctttt ggcggtttcc
    10981 ctgccgtcta tggcggcaac ccatgttttg atggaaaccg atatgggcaa tatccgtttg
    11041 gttttggacg aatccaaagc acccaaaacc gttgccaatt tcgtgcgcta tgcccgaaaa
    11101 ggcttttacg acaatacgat ttttcaccgc gtcatcggcg gcttcgttat ccaaggcggc
    11161 ggattgaccg aggacttggc acaaaaggca agcgataagg ccgttgccaa cgaatccggc
    11221 aacggcttga aaaacactgt cggcaccatc gccatggcgc ggacgacaga ccccgattcc
    11281 gccaccagcc aattctttat caatctggcg gacaatgatt cactcaacta caaaaacgga
    11341 caatacggct ataccgtttt cggcagggtc gaaagcggaa tggacaccgt ttccaaaatc
    11401 gcccgcgtca aaaccgccac gcgcggcttt tatcaaaacg tacccgtaca gcccgtcaaa
    11461 atccgtcgcg ttgttgtcga gtaatataac gggaaacctt cagaaagctg aaacggaaaa
    11521 agcaggtgtt tggggttgaa aagcgtctgc ttcgggattt tataatggat taaatttaaa
    11581 ccagtacggt gttgtctcgc cttgccgtac tatttgtact gtctgcggct tcgtcgcctt
    11641 gtcctaattt aaatttaatc cactataaaa tgccgtctga aacgccaaac gggcttcaga
    11701 cggcattttt gacggcgggg ggttacgcgc cgcaggtttt cggcttgttc gccagaatgt
    11761 tgatgacttt gcgttcggct ttttgcggct cgattttgat ttcgctttcg tcttcttcgc
    11821 tgccgtctga aaaacgttcg ggcatttttt cgctgtcaaa cgccaaatcg ccgccgtgtt
    11881 tcaggctttg accgcgttcc aatccgacaa agtcgaagag ttcggtatcg gcaaggtggg
    11941 aagggacgac gttttgcagg gcggagaaca tcgattcgat gcggccgggg aagcgtttgt
    12001 cccaatcgcg cagcatatcg ccgatgactt ggcgttgcag gttgggttgc gagccgcaga
    12061 ggttgcacgg gatgatgggg aattgtttta attcggcgta tttgattaag tctttttctt
    12121 ttacatacgc cagcggacgg atgacgatgt gttcgccgtt gtcgctcacc agcttgggcg
    12181 gcatggcttt gagtttgccg ccgtaaaaca tatttaaaaa caaggtggcg aggatgtcgt
    12241 cgcggtggtg tcccaaggcg attttggtgc agcccaattc ttttgcagtg cggtagagga
    12301 tgccgcggcg caggcggctg cacagcgaac aagtcgtttt gccttcgtct aatacgcgtt
    12361 tgacggtgga gtaggtgtct tcttcaacga ttttgtaggg aacgccgatg ctttcgagat
    12421 aggtcggcaa tacttcttcg gggaagcccg gctgcttttg gtcgagattg acggcaacta
    12481 gttggaaatc aatcggcgcg ctggcttgga gccggcgcag gatgtccaag agggcatagc
    12541 tgtcttttcc gccggagagg cagaccatga ttttgtcgcc cggctcgatc atattgaaat
    12601 cgttaatcgc gtcgccgacg gcgtggcgca ggcgtttgct gagtttgttg ttttcgagtt
    12661 cttgcttgat ttttttggac ataacggttc gggtttgaaa attggaaagg cggcattgta
    12721 accgattggc ggggcggcaa tgccgtctga agggcttcag acggcatcgg cggcttattc
    12781 tgcattttcg gttttaaaga agagatgaac cgctttgaag ataccgccgt ttgggacggt
    12841 cagttctttt tgtgcggcgg agaatttaat cacggtaagg gcggtaaagt tttccgaatc
    12901 ttgaacgctg tcgagtacga tgccggcctc ttcgccgtcc gccgtcagca gggttcctgc
    12961 ttcgacggcc gaatttcccg acaataccgc caagccgcgt ttgacctgcc cccgatactg
    13021 ggcacgggca atgatttcct gtcccggata gcagcctttt ttgaagtgta cgccgccgat
    13081 gatgtgctgg ttgagcattt gggcgacggc ggtttctttg gtagccgcgc atatccacgg
    13141 gtaaccgctg cggatttcgt gcagccgcca cgcgttttcg gcggcggcat cataaggcgg
    13201 cagggcggtt tcgggggcga tgtgcaaaat gccccgatgg ggcaggacga cggaacagat
    13261 gccgtctgaa acgcattcgg cggtaaagac gagactgggt tcttgcgcgg caagcggttc
    13321 ggcggatgct tctaattccg cgccgacggc gtaatcttca aggatttcaa aaacgacttt
    13381 ggcacgcaac acaaacatcc gcaggcgttt gacggttgct tcaagcaggt cttgcgccat
    13441 aatcagcagc aaatcgccgc ctcggttgac gacaatcata ttggcgatga cgcggccttt
    13501 gggcgtgttg taagtcgcat aacacgcctg cccggtctga agattattga tgtcgttgga
    13561 aagctgtccg tgcaggaagg tttggcggtc ttcgccactg acgcgcacca cgccgaaaaa
    13621 gggcagtaag gttttcatca tttgcctact ctgaaaatat aaggaaatct gtttatgcag
    13681 ttgccgcgtc tctcttcacg gcggttattt tgatttcgac gcgccactcc ggacgggcga
    13741 gccgcgcttc cacgcaggcg cgggcgggcg ttctgccggc ggcaacccaa gcgtcccaca
    13801 cgccgttcat ttccgcatag tcgcccatat cgcgcagata gatgaccgca tccaaaacgt
    13861 gcgctttgtc cgagccgcat tccgccagcc agcggtcgat ttgggcaagc acgtcggcag
    13921 tctgttcggc agccgtttca ccgttttcgg gaaccatgcc agagaggaaa atcaagccgt
    13981 ttgcgccgac ggcttcggaa tagcggggcg ttgtgccgaa atatcggata tccatatcgg
    14041 tttccttcga taaaggggat atatggtaac attgcgcttg accgatttcc atgttttgca
    14101 tgacgaaaaa tgagtaaaca cacttatccg ataacacctg ccgtgcgcgt tttgcgtgaa
    14161 aacggcatcg aatttgaacc ttttacctat gcctatgagg aacacggcgg cacggcgcag
    14221 tttgcccgac tattcggcaa agacgaacac ttggtcatta aaaccattgt tttgcaagat
    14281 gaaaacggga atgggctgat tgtcttgatg cacggcgaca aacagatttc cacgcgcaat
    14341 ctagctcggc atttgggtgc gaaacgcatc gaacccgcta cgcccgcaca ggcaaacaag
    14401 tggacgggct atctggtcgg cggcacaacg ccgttcggca tccggacaaa attggatatt
    14461 tacgtcgaac agtcggtgat ggatttggaa accatctata tcaacggcgg gaaacgcggg
    14521 ttcattatcg gtatccgtcc cggagattta aatattttga acccgaaaac aatacaggcg
    14581 gcggtttgac cgggaagtat aaggaacaat atggacaaag atttgtatgc cgtattgggc
    14641 gtgtcgccgc aggcgggggc ggacgaaatc aaacgcgcct accgcaagct ggcaatgaaa
    14701 taccatcccg accgcaatcc gggcaatccg caggcggaag aaaagttcaa agaaatccaa
    14761 cgggcttacg atacgctttc cgacctgtcg aaacggatgc aatacgacgc gtccttcaga
    14821 cggcatgagg aacgcgggcg gcaggaagag gcattccgcc gcgaacaggc gcgcagggag
    14881 cagttttacc gcgaacagat gcgccgcgaa caggcgttca gacaggcgtt tgaacggcag
    14941 gcatcacgtt cgtgccatac ttacgaaccg tccggcggcg gaagcgggcg caactatgtc
    15001 ctcgccgcct acatcctgtt cggtttgggt gcaatcatgc tgttcatgcc catagtcggc
    15061 gtgattttcg cctatatgcc catagtcggc gtgattctcg cctatatgaa acggaacagt
    15121 ttggacagca ttgtctatgc cgcacatacc gaatacctga ttaaaacctt ttggcgcaca
    15181 ttttggcttt atattttggg tgcgctgact gcccttttgg gtatcggcgt gctgattatt
    15241 attgcaacga acgtctggta tttctaccgc atcatcgccg gctttatccg cttcaacggc
    15301 ggcagggcgg ttgcacccga gaaatggata tagtatggct tacctgttaa tcagcatcgt
    15361 gttcagcgtg tcggtttcca ttttgctgaa aatggcaagg aagaaaaaaa tcgacatcgc
    15421 gcaggcggtc gccgtcaatt atgtggtcgc ggtcatactg accctgctgg tattgaagcc
    15481 ggatgtcggc aatatcggcg catttttgcc gacatggtgg ctgtttgccg cattgggcgt
    15541 gctgctgccg tccgtatttg tcattatggg caaatccgta gaatccgccg gtatcgtcaa
    15601 atccgacgcg gcgcagcgtt tgtcgctgtt tttgccgatt gttgccgcct tgacgctgtt
    15661 tggcgaaaaa ctcagcgaag gcagactaat cgggctgtgc ctcgcatttg ccgcactgtt
    15721 ctgcctgctt tggaaacaca gcggtggcaa aaaatcagga agcgcgtggc ggcaggcggc
    15781 attgctgctg ggcgtgtggg caggttacgg cattatcgat atcctgttca aacagcttgc
    15841 caaaagcgga acggcatttg cgggcaacct gctggttgca tttgtgctgg cgggtgtgct
    15901 gatgtttgcc tgcctgtttg ccaaatcggt cagatggcgt gttgagagtg tggtcggcgg
    15961 catattcttg ggcggtttga attttatgaa tatcgtaacc tacatcaccg cgcaccaaat
    16021 gatgaaggat aatccgacct tggtttttgc cggtatgaat atcggcgtga ttgttttggg
    16081 tacgctttcg ggcgcattgt tctttaagga aaaaatcaac acaatcaata cggcgggaat
    16141 cgtgttggca ctgtgttcta tcgcctgcct gttttattgg ggggaagtca aggtactgtt
    16201 cggcatataa tccggctgat tgatataaca aaatgccgtc tgaagcagca tccctgcttc
    16261 agacggcatt tgtctgcaac gttacagatg ggggttcatc aggttctcgg gagagaggat
    16321 gcggttgagt tcttcttcgc tcaacagccc gcgttccaag acaacctcgc gcacgccttt
    16381 gccggtttgg gcgcagattt tgccgaccaa atcgccgttg tggtgtccga tatacggatt
    16441 cagataagtc accaaaccga tggagttgaa aacgtaacgt tcgcagattt cgcggttgac
    16501 cgtaatgcct ttgacgcatt tgtcggacag gttgactgcg gcattgccca agagggaaat
    16561 ggtttcaaac atacattggg cgatgaccgg ctccatcacg tttaattgca gttgcccggc
    16621 ttcggcggcg aaggtaatcg tcgtgtcgtt gccgatgact ttgaagcaga cttggttgac
    16681 cacttcggga atcacgggat tgactttggc gggcattatg gaagaaccgg cctgcaattc
    16741 gggcaggttg atttctttca agccggcacg cgggccggaa gagagcaggc gcaagtcgtt
    16801 gcagattttg gagagtttga ccgccgtgcg cttcaatgcg ccgtgtacca tcacatatgc
    16861 gccgcagtcg gaggtcgcct caatcaggtt ttcggtcagt ttgcaaggca agccgctgac
    16921 ttcggagagt tttttgacca ccagttcggc gtagcctttg ggcgtgttca cgcccgtgcc
    16981 gattgccgtt gcgcccaaat tgacttccaa cagcagttgg cgggtgcggt cgaggttgag
    17041 gatttcttct tccaacaaca cttggaaaga ttggaattct tggccggcag tcatcggcac
    17101 ggcatcttga agctgggtgc ggcccatttt caaaacgtct ttaaactctt cggctttggc
    17161 ggcaaaggcg tttttcagga cggccagttt gtcgagcaat tcgccgatgc tgtaatacac
    17221 ggcaaggcgg aagccggtag ggtaggcatc gttggtggat tggctggcgt tgacatgatc
    17281 catcggattg acgatatcgt agcggccttt ttcgtatccc aagacttcca atgcgaggtt
    17341 ggcgatgact tcgttggtgt tcatattgac cgaagtaccc gcaccgccct gatacacatc
    17401 ggacgggaat tggtcgaggc agcggttgtt cagcagaact tcgtcgcaag ccttttcaat
    17461 ggcggcggcg atttcgggct tgaccgcgcc caacttaccg tttgcctgtg ccgtcgcctt
    17521 tttcaccatc accatactgc ggacaaactg cggcacgtca gaaatttttt gtgtggagat
    17581 tttaaagttt tcaatggcgc gcagggtgtg gatgccccaa tacacttcgg cgggaatctc
    17641 gcggtcgccc aataaatcgt gttcgatacg gacagtcatg tttttacctt tgtaagtcgg
    17701 ataattaata ttgaaaaaat gcgccatcgg aaagatgccg ccgcaggacg aacactatac
    17761 cggccggatg aaattgtcca tatcgtatgc cgtctgaaaa cgggaaacgt tgttttcgg
//
LOCUS       DAWKOX010000025        17310 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.025, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000025 DAWKOX010000000
VERSION     DAWKOX010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17310
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.025"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            32..1165
                     /gene="tuf"
                     /locus_tag="WJK78_000608"
     CDS             32..1165
                     /gene="tuf"
                     /locus_tag="WJK78_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ7597564.1"
                     /translation="MGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARGI
                     TINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREH
                     ILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALK
                     ALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERG
                     IIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVL
                     AKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMV
                     MPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
     gene            1172..1247
                     /locus_tag="WJK78_000609"
     tRNA            1172..1247
                     /locus_tag="WJK78_000609"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1205..1207,aa:Trp,seq:cca)
     gene            1362..1640
                     /gene="secE"
                     /locus_tag="WJK78_000610"
     CDS             1362..1640
                     /gene="secE"
                     /locus_tag="WJK78_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ7597565.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            1642..2178
                     /gene="nusG"
                     /locus_tag="WJK78_000611"
     CDS             1642..2178
                     /gene="nusG"
                     /locus_tag="WJK78_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ7597566.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            2279..2713
                     /gene="rplK"
                     /locus_tag="WJK78_000612"
     CDS             2279..2713
                     /gene="rplK"
                     /locus_tag="WJK78_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ7597567.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            2713..3408
                     /gene="rplA"
                     /locus_tag="WJK78_000613"
     CDS             2713..3408
                     /gene="rplA"
                     /locus_tag="WJK78_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ7597568.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKTTRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGISVDTSSVNN"
     gene            3638..4138
                     /gene="rplJ"
                     /locus_tag="WJK78_000614"
     CDS             3638..4138
                     /gene="rplJ"
                     /locus_tag="WJK78_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ7597569.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            4196..4567
                     /gene="rplL"
                     /locus_tag="WJK78_000615"
     CDS             4196..4567
                     /gene="rplL"
                     /locus_tag="WJK78_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ7597570.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            4758..8936
                     /gene="rpoB"
                     /locus_tag="WJK78_000616"
     CDS             4758..8936
                     /gene="rpoB"
                     /locus_tag="WJK78_000616"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ7597571.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDKDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNKLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            9093..13268
                     /gene="rpoC"
                     /locus_tag="WJK78_000617"
     CDS             9093..13268
                     /gene="rpoC"
                     /locus_tag="WJK78_000617"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ7597572.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVNQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGAAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            13560..13817
                     /locus_tag="WJK78_000618"
     CDS             13560..13817
                     /locus_tag="WJK78_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597573.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGNRMGMPINIG"
     gene            13814..13963
                     /locus_tag="WJK78_000619"
     CDS             13814..13963
                     /locus_tag="WJK78_000619"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7597574.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            14142..14513
                     /gene="rpsL"
                     /locus_tag="WJK78_000620"
     CDS             14142..14513
                     /gene="rpsL"
                     /locus_tag="WJK78_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ7597575.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            14631..15101
                     /gene="rpsG"
                     /locus_tag="WJK78_000621"
     CDS             14631..15101
                     /gene="rpsG"
                     /locus_tag="WJK78_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ7597576.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            15120..17225
                     /gene="fusA"
                     /locus_tag="WJK78_000622"
     CDS             15120..17225
                     /gene="fusA"
                     /locus_tag="WJK78_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ7597577.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4598 a         3904 c         4481 g         4327 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttggc taaaaaattc ggtggtgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtggaatac gaaaccgaaa cccgccacta cgcacacgta gactgcccgg ggcacgccga
      241 ctacgttaaa aacatgatta ccggcgccgc acaaatggac ggtgcaatcc tggtatgttc
      301 cgcagccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gtcaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatt gtacaaggtt ctgcactgaa agccttggaa ggcgatgccg cttatgaaga
      541 gaaaatcttc gaactggctg ccgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaaccg ttcctgctgc ctatcgaaga cgtgttctcc atttccggcc gaggtacagt
      661 agtaaccggc cgtgtagagc gcggtatcat ccacgttggt gacgagatcg aaatcgtcgg
      721 tctgaaagaa acccaaaaaa ccacctgtac cggtgttgaa atgttccgca aactgctgga
      781 cgaaggtcag gcgggcgaca acgtaggcgt attgctgcgc ggtaccaaac gtgaagacgt
      841 ggaacgcggt caggtattgg ccaaaccggg tactatcact cctcacacca aattcaaagc
      901 agaagtgtac gtactgagca aagaagaggg cggccgccat actccgttct tcgccaacta
      961 ccgtccgcaa ttctacttcc gtaccaccga cgtaaccggc gcggttactt tggaagaagg
     1021 tgtggaaatg gtaatgccgg gtgagaacgt aaccattacc gtagaactga ttgcgcctat
     1081 cgctatggaa gaaggcctgc gctttgcgat tcgcgaaggc ggtcgtaccg tgggtgccgg
     1141 cgtggtttct tctgttatcg cttaagttta gaggccaata gctcaattgg tagagtatcg
     1201 gtctccaaaa ccgagggttg ggggttcgag accctcttgg cctgccaaat aaaaaattaa
     1261 ccggccttgt gtcggttaat ttttttgtat ttgttattta gtaaactctc ttgccattta
     1321 catggattga gaatagacag atgctatgat ggataaataa tatgacagaa catacgcctg
     1381 aaaaaaagaa cgttaaagtg gatcaactgg ttgttcaaga taaagaatct gcatctaatt
     1441 ccggtaagga agggtttttt gcatatttct caaattcttg gtccgaattc aaaaaggtgg
     1501 tttggcctaa gcgtgaagat gctgtcagaa tgactgtatt tgttatagtg tttgttgctg
     1561 tgctttctat atttatctat gcggcagata cagcaatttc gtggttattt tttgatgtat
     1621 tgctgagaag ggaaggttga gatgtcgaaa aaatggtatg ttgtacaggc gtattcgggg
     1681 tttgagaaga atgtccaacg aatattggaa gagcgcattg cccgtgagga gatgggagat
     1741 tatttcggac aaattctggt gcctgtagag aaagttgttg atatccgcaa tggtcgtaag
     1801 actattagtg aaagaaagtc atatcctggt tatgtgctag ttgagatgga aatgacagat
     1861 gactcttggc atcttgtaaa aagcaccccc cgtgtttccg gttttattgg agggagggct
     1921 aatagaccta cgccgattag tcagagagag gctgaaatta ttttacagca ggttcagacc
     1981 ggcatagaga agccgaaacc aaaagttgaa tttgaggtcg gtcaacaggt tcgtgtaaat
     2041 gaagggccgt ttgcggattt taacggggtg gttgaggagg tcaattatga acggaataag
     2101 ttacgcgtgt ctgttcagat atttggtaga gaaacacccg ttgagctgga gttcagccag
     2161 gttgaaaaga ttaactgatt tttatacttg aaaaaaaagc aataagagga tagaatcaaa
     2221 aattaacttg gggagcggaa atggttccgc gtcttacccg tttttaggag ttcgttaagt
     2281 ggcaaagaaa attatcggct atattaaact gcaaattcct gcaggtaaag ccaatccatc
     2341 tcctccggtt ggtcctgctt tgggtcagcg cggtttgaat attatggaat tttgtaaggc
     2401 atttaatgct gcaacccaag gtatggagcc tggcttaccg attccggttg tgattactgc
     2461 atttgcagat aaatcattca catttgtgat gaaaaccccg ccagcttcta tcttgttgaa
     2521 aaaggctgcc ggtttgcaaa aaggtagttc taatcctctg accaacaaag tgggtaaatt
     2581 gacccgtgcc cagttggaag aaattgctaa aactaaagat cctgatttga ctgctgctga
     2641 cttggatgcg gctgtccgta ctatagcagg ttctgctcgc tcaatgggct tggatgtgga
     2701 gggtgttgta taatggctaa agtatctaaa cgcttgaaag ctcttcgctc ttctgtggaa
     2761 gccaataaat tatatgcaat tgatgaagca attgctttgg taaaaaaagc agcgactgct
     2821 aaatttgacg agtctgttga cgtatctttc aacttgggcg ttgatccgcg taaatctgac
     2881 caagttatcc gtggttcggt cgttctgcct aaaggcaccg gtaagacaac ccgtgtggct
     2941 gtatttactc aaggtgcaaa tgcagaagct gctaaagaag ctggtgcaga tatcgtcggt
     3001 ttcgaagatt tggctgctga aatcaaagca ggcaatctga actttgacgt tgttattgct
     3061 tctcccgatg caatgcgtat tgttggtcaa ttgggtacca tcttgggccc tcgtggtctg
     3121 atgccaaacc ctaaagtagg tacggttacc cctaatgttg ccgaagcagt aaaaaatgca
     3181 aaagcaggtc aagtgcagta ccgtaccgac aaggcaggta ttgttcatgc aacgattggt
     3241 cgtgcttcat tcgctgaagc tgatttgaaa gagaactttg atgcgttgct ggatgctatc
     3301 gttaaagcca agcctgctgc cgctaaaggt cagtatctga aaaaagttgc tgtgtctagc
     3361 accatgggtt tgggtattag cgttgataca tcaagcgtaa ataactaatc ttaaggaatt
     3421 ttcaagcagt ttggttttct gggctgcttg aatttgggct acttaaaatt aagtagatgt
     3481 ccaagaccgt agggatcgta agatttaatc gtaactgccc tacgcagacg gtagtcctga
     3541 aacacattgc aagattgctt gtaagatgtc tttttaggtt accgcgctgg tgggatatcg
     3601 ttttggtatc ctgtttataa acagtgggag gtagaccttg agtctcaata ttgaaaccaa
     3661 gaaagtggcg gtcgaggaaa ttagcgcggc aattgctaat gctcaaaccc tcgtagtcgc
     3721 tgaatatcgc ggtatcagtg tttccagtat gactgagctt cgtgcgaatg cacgtaaaga
     3781 aggcgtttat ttgcgcgttc tgaaaaatac tttggctcgt cgtgcagtgc aaggtacttc
     3841 atttgcagaa ttggccgatc aaatggttgg tccgttggtt tacgctgctt ctgaagatgc
     3901 tgttgctgct gctaaagtgt tgcaccaatt cgcgaaaaaa gatgacaaaa ttgtcgttaa
     3961 agccggttct tacaatggcg aagtaatgaa tgctgctcag gttgctgagt tggcttctat
     4021 tccgagccgc gaagagctgt tgtccaaact gttgttcgtt atgcaagctc ctgtatcggg
     4081 ctttgcgcgc ggtttggctg ctttggcaga gaaaaaagcc ggcgaagaag ccgcttaatc
     4141 gattttgttt ctgttaatca attatttttt aatacaatat ttggagtaaa atagcatggc
     4201 tattactaaa gaagacattt tggaagcagt tggttctttg accgtaatgg aattgaacga
     4261 cttggttaaa gcttttgaag aaaaattcgg tgtttctgct gctgctgttg cagttgcagg
     4321 tcctgctggt gccggtgctg ccgatgctga agaaaaaacc gaatttgatg tcgttttggc
     4381 ttctgccggc gatcaaaaag tcggcgtgat taaagttgtc cgtgcaatta ccggtttggg
     4441 tctgaaagaa gctaaagaca tcgttgacgg tgcacctaaa accattaaag agggtgtttc
     4501 taaagctgaa gccgaagaca tccaaaaaca actggaagaa gccggcgcta aagtcgaaat
     4561 caaataattt gatgcttctt atgaaggctg gcagttttct gccagcctta ttttgcttct
     4621 taaaataagc attaagtatt gtttacattt atttgcatag tttttatcaa atcattgcaa
     4681 ataaatgtaa acatcagatt gatgcgtgcc gttgctttca gacggcctat tattgaaaat
     4741 tacttttcgg agtgtatatg agctattcgt ttaccgagaa aaaacgtatc cgtaagagtt
     4801 ttgcaaagcg ggaaaatgtt ttggaagttc ctttcctgct ggcaacccaa attgattctt
     4861 atgcgaagtt tttgcagctg gaaaatgctt ttgacaaacg taccgatgac ggtctgcagg
     4921 cggcatttaa ttctattttc ccgattgtga gccataacgg ttatgcgcga ttggagtttg
     4981 tgcattacac attgggcgag cctttgttcg atattcccga atgtcagttg cgcggaatca
     5041 cttatgcagc ccccttgcgc gcgcgtatcc gtttggtgat tttggataag gaagcatcta
     5101 aaccgacggt aaaagaagtt cgtgaaaacg aagtgtatat gggcgaaatt ccgttgatga
     5161 ccccgagcgg ttcttttgtg attaacggca cagagcgtgt gattgtctcc cagttgcacc
     5221 gttcgcccgg tgtattcttc gagcatgaca aaggtaagac gcactcttcc ggcaaattgt
     5281 tattctccgc ccgcatcatt ccctaccgtg gttcatggtt ggattttgaa tttgatccga
     5341 aagatttgct gtatttccgt atcgaccgcc gccgtaaaat gccggtaacg attttgttga
     5401 aggctttggg ctacaacaat gagcaaatct tggatatttt ctacgacaaa gaaacgttct
     5461 atttgtcttc aaacggtgtt caaaccgatt tggtcgcaga ccgtctgaaa ggcgaaactg
     5521 ccaaggtcga tatcttggat aaagaaggca atgtattggt tgccaaaggt aagcgcatta
     5581 ctgcgaaaaa tatccgtgat attaccaatg caggcctgac ccgtttggat gtagaaccgg
     5641 aaagcctgct gggcaaagca ttggctgccg atctgattga ttcggaaacc ggcgaggtat
     5701 tggcttctgc caatgatgaa attacagaag agttgttggc caaatttgat atcaacggcg
     5761 taaaagaaat tacgaccctt tatatcaatg agctggatca gggtgcttat atctccaata
     5821 ccttgcgtac ggatgagact gccggccggc aggcggctcg tgttgcgatt taccgtatga
     5881 tgcgtccggg cgaaccgccc accgaagagg cggtcgagca attgtttaac cgcttgttct
     5941 tcagtgaaga cagctacgat ctgtcccgcg taggccgtat gaaatttaat acgcgcacat
     6001 acgaacaaaa actgtccgaa gcccaacaaa actcttggta cggccgcctg ctgaacgaaa
     6061 cgtttgccgg tgctgccgac aaaggcggtt atgtcctgag cgtcgaagat attgtcgcct
     6121 cgattgcgac tttggtcgag ttgcgtaacg gccatggcga agtggacgat atcgatcact
     6181 tgggcaaccg ccgagtacgt tcggtaggcg agctgactga aaaccaattc cgtagcggtt
     6241 tggcccgtgt ggaacgtgcc gtaaaagaac gtttgaatca ggcggaatca gaaaacttga
     6301 tgccgcacga tttgattaat gcaaaacctg tttctgccgc tattaaagaa ttcttcggct
     6361 ccagccaatt gagtcagttt atggatcaga ccaacccctt gtctgaagta acccataaac
     6421 gccgtgtatc tgcattgggt ccgggcggtt tgacccgcga acgtgcagga tttgaggtgc
     6481 gggacgtgca tccgacccac tacggtcgcg tatgtccgat tgaaacgcct gaaggtccga
     6541 acatcggttt gatcaactca ttgtccgttt atgcgcgcac caatgattac ggtttcttgg
     6601 aaacgcctta ccgccgcgtt atcgacggca aagtaactga agaaatcgac tacttgtctg
     6661 ccatcgaaga aggccgctat gtgattgcac aggcgaatgc cgatttggac aaagacggca
     6721 atctgattgg cgacttggtt acttgtcgtg aaaaaggcga aaccattatg gcaacgcctg
     6781 accgcgttca atatatggac gtggcaaccg gtcaagtggt atccgttgca gcatccctga
     6841 ttccgttctt ggaacacgat gacgcgaacc gcgcattgat gggtgcgaat atgcaacgtc
     6901 aggcagtgcc ttgcttgcgt cctgaaaaac cgatggtcgg taccggtatc gagcgttccg
     6961 ttgccgttga ctctgctact gcaatcgttg cccgccgagg cggcgtggtc gagtatgtcg
     7021 atgccaaccg tgttgtgatt cgtgtccatg acgacgaagc gactgccggc gaagtgggtg
     7081 tcgatattta caacttggtt aaatttaccc gttccaacca gtctaccaat atcaatcagc
     7141 gtcctgccgt caaagccggc gatgttttgc aacgcggcga tttggtggcc gatggcgcgt
     7201 ccaccgattt gggcgaattg gctttgggtc aaaatatgac catcgccttc atgccgtgga
     7261 acggttacaa ctacgaagac tcgattctga tttccgaaaa agtggctgcg gacgaccgct
     7321 atacttcgat tcacattgag gaattgaatg tcgttgcccg cgataccaag ctgggtgcgg
     7381 aagacattac ccgcgatatt ccgaacttgt ccgagcgtat gcaaaaccgt ttggacgaat
     7441 ccggtatcgt ttacatcggt gcggaagtag aagccggcga tgtgttggta ggcaaggtaa
     7501 cgcctaaagg cgaaacccag ctgacgccgg aagaaaaact gctgcgcgcc atcttcggtg
     7561 aaaaagcatc tgacgtaaaa gatacttcat tgcgtatgcc taccggcatg agcggtaccg
     7621 ttatcgacgt tcaagtcttc actcgtgaag gtattcaacg cgacaaacgt gctcaatcca
     7681 ttatcgattc cgagttgaaa cgctaccgtt tggatttgaa cgaccaattg cgtattttcg
     7741 acaacgacgc attcgaccgt atcgagcgta tgattgtcgg tcagaaagcc aacggcggcc
     7801 cgatgaagct ggccaaaggc agtgaaatca cgaccgaata tctggcgggt ctgccgagca
     7861 ggcacgattg gttcgatatc cgtctgaccg atgaagattt ggccaagcag ttggaactga
     7921 ttaaagtgag cctgcaacaa aaacgcgaag aagcggacga gttatacgaa atcaagaaga
     7981 aaaaactgac ccaaggcgac gaattgcaac ccggcgtaca aaaaatggtg aaagttttta
     8041 tcgccatcaa acgccgtctg caagccggcg acaaaatggc gggccgccac ggtaacaaag
     8101 gcgtggtatc gcgcattctg ccagtggaag acatgcctta catggcggac ggccgtccgg
     8161 tagacatcgt actgaaccca ttgggcgtac cttcccgtat gaacatcggt cagattttgg
     8221 aagttcactt gggttgggca gcaaaaggta tcggcgagcg tatcgaccgt atgctgaaag
     8281 agcaacgcaa agcaggcgag ttgcgcgagt tcttgaacaa actctacaac ggcagcggca
     8341 agaaagaaga tttggatgcc ctgactgatg aagaaatcat cgaactggcc tccaacctgc
     8401 gcaaaggtgc atctttcgcc tctcctgtat tcgacggtgc gaaagagtct gaaatccgcg
     8461 aaatgttgaa cttggcttat ccgagcgacg atcctgaggt tgaaaaactg ggcttcaacg
     8521 acagtaaaac ccaaatcacg ctgtatgacg gccgttcagg cgaagcattt gaccgcaagg
     8581 ttacagtagg tgtgatgcac tatctgaaac tgcaccactt ggttgacgaa aaaatgcacg
     8641 cgcgttctac cggtccgtac agtctggtta cccagcagcc tttgggcggt aaagcccagt
     8701 tcggcggcca acgtttcggt gagatggagg tttgggcact ggaagcatac ggcgcagcct
     8761 acacgctgca agagatgctg actgtgaagt ctgacgacgt gaacggccgt accaaaatgt
     8821 acgaaaacat cgtcaaaggc gaacacaaaa tcgatgccgg tatgcccgag tccttcaacg
     8881 tattggtcaa agagattcgc tcactgggct tggatatcga tttggaacgt tactaaacaa
     8941 aagttttcag acggcctttc agggtcgtct gaaaaagtgg tttcagaata agaatgaagc
     9001 aatcggcatt taggccgtct gaaatcaaaa gtaccgtttc cccatatcga aaatccgcca
     9061 tgcggtaaaa atacttcctt caaggagcaa aaatgaattt gttgaactta tttaatccgt
     9121 tgcaaactgc cggcatggaa gaagagtttg atgccattaa aatcggtatt gcctctcccg
     9181 aaaccatccg ctcatggtct tatggcgaag ttaaaaaacc tgaaaccatc aactaccgta
     9241 cgttcaaacc tgagcgtgac ggtttgttct gtgccaaaat ctttggcccg gtcaaagact
     9301 acgaatgctt gtgcggaaaa tacaaacgct tgaaatttaa aggtgtaact tgtgaaaaat
     9361 gcggcgtgga agtaaccctg tccaaagtgc gccgcgaacg catgggccat atcgaattgg
     9421 ctgcgcccgt cgcacatatt tggttcttaa aatccctgcc ttcccgcttg ggtatggtgt
     9481 tagacatgac tttgcgcgat atcgaacgcg tattgtactt tgaagcattt gtggtaaccg
     9541 atcccggtat gactccgctg caacgccgcc aattgctgac tgaagacgat tactacaaca
     9601 agctggacga atacggcgac gacttcgatg ccaaaatggg tgcagaaggt atccgcgaat
     9661 tgctgcgtac cttgaatgta gcaggcgaaa tcgaaatcct gcgccaagag ttggaatcga
     9721 ccggttccga caccaaaatc aaaaaaatcg ccaaacgctt gaaagtattg gaagctttcc
     9781 atcgttccgg tatgaagctg gaatggatga ttatggatgt gctgccggta ttgccgcctg
     9841 atttgcgtcc gttggttcca ttggatggcg gtcgttttgc cacttccgat ttgaacgatt
     9901 tgtaccgtcg cgtcatcaac cgtaacaacc gtctgaaacg tctgttggaa ctgcatgcgc
     9961 ccgacattat cgtccgcaac gaaaaacgta tgttgcaaga agcagttgac tcgctgttgg
    10021 ataacggccg tcgcggtaaa gccatgaccg gcgccaacaa acgcccgctg aaatcattgg
    10081 cagacatgat taaaggtaaa ggcggtcgct tccgtcaaaa cctgttgggc aaacgtgtgg
    10141 actactccgg ccgttccgtg attaccgtag gcccatacct gcgtctgcac caatgcggtc
    10201 tgccgaaaaa aatggctttg gaattgttca aaccgttcat tttccacaaa ttggaaaaac
    10261 aaggtttggc ttctactgtt aaagctgcga aaaaattggt agaacaagaa gtacctgaag
    10321 tatgggatat cttggaagaa gtcatccgcg aacatccgat tatgttgaac cgtgcgccaa
    10381 ccctgcaccg tttgggtatt caagcgttcg aacccatcct gattgaaggt aaagccattc
    10441 agttgcatcc gttggtatgt gccgcattta acgccgactt tgacggcgac caaatggcgg
    10501 tacacgttcc attgagcttg gaagcacaaa tggaagcacg cacgctgatg ctggcttcaa
    10561 acaacgtatt gtctcctgcc aacggcgaac cgattatcgt accttcccaa gacatcgtat
    10621 tgggtctgta ctacatgacc cgcgaccgta tcaatgccaa aggcgagggc agcctgtttg
    10681 ccgatgtgaa agaagtgcat cgcgcatacc ataccaaaca ggtcgagctg ggtacgaaaa
    10741 ttaccgtacg tctgcgcgaa tgggtgaaaa acgaagcagg tgagtttgag cctgtcgtta
    10801 accgttacga aacaaccgtc ggccgtgcat tgttgagcga aatcctgccg aaaggcctgc
    10861 cgtttgaata tgtcaacaaa gcgttgaaga aaaaagaaat ttctaaactg attaacgcat
    10921 cgttccgcct gtgcggcttg cgcgatacgg ttatctttgc tgaccacctg atgtacaccg
    10981 gtttcggatt tgcggcaaaa ggcggtattt ccattgccgt tgacgatatg gaaattccaa
    11041 aagaaaaagc ggccttgctg gctgaagcca atgccgaggt taaagaaatc gaagaccaat
    11101 accgtcaagg tttggttacc aacggcgaac gctacaacaa ggtggtcgat atttggggtc
    11161 gtgccggcga taaaatcgct aaagcgatga tggacaacct gtccaaacag aaagttatcg
    11221 accgtgacgg caacgaagtc aatcaagagt cattcaactc catctatatg atggcggact
    11281 ccggtgcccg tggttctgcg gctcagatta aacagttgtc cggtatgcgc gggttgatgg
    11341 ctaaacctga cggctcgatt attgaaacgc cgattacctc aaacttccgc gaaggtttga
    11401 ccgtattgca atactttatt gcgactcacg gtgcgcgtaa aggtttggcg gataccgcgt
    11461 taaaaaccgc gaactccggt tacctgaccc gtcgtctggt agacgtaact caagatttgg
    11521 tcgttgttga agacgattgc ggtacttcag acggctttgt catgaaggca gtggtacaag
    11581 gcggtgatgt gattgaagca ttgcgcgatc gtattttggg ccgtgttact gcgtctgacg
    11641 ttgtcgatcc gtcaagcggc gagaccttgg ttgaagccgg tacgttgttg actgaaaaac
    11701 tggtggatat gattgaccaa tccggtgtcg atgaagtcaa agtccgtact ccgattactt
    11761 gtaaaacccg ccacggtttg tgcgcgcact gttatggtcg cgacttggcg cgcggtaagc
    11821 tggttaacgc cggtgaagca gttggtgtga ttgctgcaca atccattggt gaaccgggta
    11881 cccagttgac catgcgtacg ttccacattg gtggtgcggc atcccgtgcg gcagcagcca
    11941 gccaagtgga agccaaatcc aacggtacgg cacgtttcag cagccagatg cgttacgttg
    12001 ccaacaacaa aggtgagttg gttgtcatcg gtcgctcttg cgaagtcgtg attcatgatg
    12061 acatcggccg tgaacgcgaa cgccacaaag taccttacgg tgccatcctg ctggtacaag
    12121 acggagcggc cattaaagcc ggtcaaacct tggcaacctg ggatccgcat acccgtccga
    12181 tgatcaccga acatgcaggt atggtgaaat ttgagaacgt ggaagagggt gttaccgttg
    12241 cgaaacaaac tgacgatgta accggtttgt ccactctggt agtgattgac ggtaaacgtc
    12301 gttcctctag tgcttctaaa ctgctgcgtc cgactgtaaa attgttggat gaaaacggcg
    12361 tggaaatctg tattcccggt acgtccactc cggtttcgat ggcattcccc gttggtgcgg
    12421 tgattaccgt acgcgaaggt caggaaatcg gtaaaggcga cgtattggcg cgtatcccgc
    12481 aagcctcttc caaaacccgc gacattaccg gtggtctgcc gcgcgttgcc gaattgtttg
    12541 aagcacgcgt gccgaaagat gccggtatgt tggcggaaat taccggtacc gtttccttcg
    12601 gcaaagagac caaaggcaag caacgtctga ttattaccga cgtggacggc gtagcatacg
    12661 agactttgat ttccaaagag aaacagattt tggtacacga cggtcaagtg gtaaaccgcg
    12721 gcgaaaccat tgtggacggc gcggtcgatc cgcacgatat tctgcgtctg caaggtatcg
    12781 aagcactggc acgctacatt gtccaagagg tgcaagaggt ttaccgtctg caaggtgtga
    12841 agatttctga taaacacatc gaagtcatca tccgtcaaat gttgcgccgt gtgaacattg
    12901 cggatgccgg cgaaaccggc ttcattaccg gagagcaggt cgaacgcggc gatgtgatgg
    12961 cggccaatga aaaagctttg gaagaaggca aagaaccggc gcgttacgaa aacgtattgc
    13021 tgggtattac caaagcttcc ctgtctaccg acagcttcat ttctgctgca tcgttccaag
    13081 aaacgacccg tgttctgacc gaagccgcga ttatgggcaa acaagacgaa ctgcgcggtt
    13141 taaaagagaa cgtcatcgtc ggccgcctga ttcctgccgg taccggtttg acttatcacc
    13201 gcagccgtca tcagcaatgg caaggggtag agcaggagac tgctgaaacc caagtaacgg
    13261 atgaataatc ttcggcgcgt ttattcaata caaaaccgca agctttaagc ttgcggtttt
    13321 tctttgtccg attaaggcaa aaacaagcgt tttcgtcatt ttgaggcgtg tggattattc
    13381 cttaggtatt ttcgggccgg agaccaacga ggtggcgggt gtcgtcggta cgtccggaga
    13441 ccaaaataac tttgccaggg atgttggttt cggcggtcaa aaaaagtagc gtcttaatgt
    13501 tttccattta aacaaatgtc gtctgaaact tcagacggca tttcctttaa aaaataaata
    13561 tgaaacccag aaatctcttt tttgcaggct gcctgctgac ttcggcgacg tttgccgagg
    13621 atatcggcgt acctgtcgaa ctgattaacg tcggtaatcg gattgcgatg ccgtctgaag
    13681 gggaaagcct cgccctcctg ccgtttgccg aggatgtacc gccggttcgc gatgcaatgc
    13741 cgtctgaagt tcctaaaagc gcggcaggcg gcgatgttcg gggtaaccgg atgggaatgc
    13801 cgattaacat cggatgagcg cggctttatg gcataaaaaa ctgtcgtgga aaggatttac
    13861 accccaaata aatttccgtt acaacaagat caacagcaat atgcccgcct tttattcgcg
    13921 cagcggcaag gaacggtttg tcagtataga aaaaacgtat tgacagtatt ttcttcagtc
    13981 gtccgactga ttgtgaggga tgtcggtaaa tatttatcgg caaacaagaa aatcatcttt
    14041 cttcttgtcg ttatgcttga ctgtatactt gcaataaaaa tataattcca ctcttgccga
    14101 catggtgtcg gcaagtattt aactcaacag gacgagaaaa tatgccaact atcaaccaat
    14161 tggtacgcaa aggccgtcaa aagcccgtgt acgtaaacaa agtgcccgca ctggaagcct
    14221 gcccgcaaaa acgcggcgtg tgcacccgtg tatacacgac tacccctaaa aaacctaact
    14281 ctgcattgcg taaagtatgt aaagtccgcc tgaccaacgg ttttgaagtc atttcataca
    14341 tcggcggcga aggccacaac ctgcaagagc acagtgtcgt attgattcgc ggcggtcgtg
    14401 taaaagactt gccaggtgtg cgttaccaca ctgtacgcgg ttctttggat actgcaggtg
    14461 ttaaagaccg taaacaagcc cgttccaaat atggtgctaa gcgtcctaaa taattactgg
    14521 gacttaaata ggcacgtcgg ccgcctaagc agaacaacgg ccgagtaagt gaatactcaa
    14581 ttgggtattc atgggaatag acccgactga atagattaaa ggaaattaaa atgccaagac
    14641 gtagagaagt ccccaagcgc gacgtactgc cagatcctaa attcggcagc gtcgagttga
    14701 ccaaattcat gaacgtattg atgattgacg gtaaaaaatc cgttgccgag cgtatcgttt
    14761 acggtgcgtt ggaacagatt gagaaaaaaa ccggcaaagt agcaatcgaa gtatttaacg
    14821 aagccattgc aaacgccaaa cctatcgtgg aagtgaaaag ccgccgtgta ggtggtgcaa
    14881 actaccaagt tcctgttgaa gttcgtcctt cacgccgttt ggctttggca atgcgctggg
    14941 ttcgcgatgc ggcccgcaaa cgtggtgaga aatccatgga cctgcgtttg gcaggcgaat
    15001 tgattgatgc gtccgaaggc cgtggcggtg cgttgaaaaa acgtgaagaa gtacaccgta
    15061 tggctgaagc caacaaagca ttctctcact tccgtttcta attttgaaag gctaataaaa
    15121 tggctcgtaa gaccccgatc agcctgtacc gtaacatcgg tatttccgcc catatcgatg
    15181 cgggtaaaac cacgacgaca gaacgtattt tgttctatac cggtttgacc cacaagctgg
    15241 gcgaagtgca tgacggtgcg gctactaccg actacatgga acaagagcaa gagcgcggta
    15301 ttaccattac ctccgctgcc gttacttcct actggtccgg tatggcgaaa caattccccg
    15361 agcaccgctt caacatcatc gacaccccgg gacacgttga ctttaccgta gaggtagagc
    15421 gttctatgcg tgtattggac ggcgcggtaa tggtttactg cgcggtgggc ggtgttcaac
    15481 cccaatctga aaccgtatgg cggcaagcca acaaatacca agtgccgcgc ttggcgtttg
    15541 tcaataaaat ggaccgtcag ggtgccaact tcttccgcgt tgtcgagcaa atgaaaaccc
    15601 gtttgcgcgc aaaccctgta cctatcgtca ttccggttgg tgcggaagac aacttcagcg
    15661 gtgtggttga tttgttgaaa atgaaatcca tcatttggaa tgaagccgat aaaggtacaa
    15721 cctttaccta tggcgatatt cctgccgaat tggtcgaaac tgccgaagaa tggcgtcaaa
    15781 atatgattga agccgcagcc gaagccagcg aagaactgat ggacaaatac ttaggcggcg
    15841 acgagctgac cgaagaagaa atcgtaggcg cgttgcgtca acgtactttg gcaggcgaaa
    15901 ttcagcctat gctgtgtggt tctgcattta aaaacaaagg tgttcaacgt atgttggacg
    15961 cagttgtaga attgctgcca gctcctaccg atattcctcc ggttcaaggt gtcaacccga
    16021 ataccgagga agccgacagc cgtcaagcca gcgatgaaga gaaattctct gcattggcgt
    16081 tcaaaatgtt gaacgacaaa tacgtcggtc agctgacctt tatccgcgtt tactcaggcg
    16141 tagtaaaatc cggcgatacc gtattgaact ccgtaaaagg cactcgcgaa cgtatcggtc
    16201 gtttggtaca aatgactgcc gcagaccgta ctgaaatcga agaagtacgc gccggcgaca
    16261 tcgcagccgc tattggtctg aaagacgtta ctaccggtga aaccttgtgt gcggaaagcg
    16321 cgccgattat cttggaacgt atggaattcc ccgagccggt aatccatatt gccgttgagc
    16381 cgaaaaccaa agccgaccaa gagaaaatgg gtatcgccct gaaccgcttg gctaaagaag
    16441 acccttcttt ccgtgtccgt acagacgaag aatccggtca aaccattatt tccggtatgg
    16501 gtgagctgca cttggaaatt attgttgacc gtatgaaacg cgaattcggt gtggaagcaa
    16561 atatcggtgc gcctcaagtg gcttaccgtg aaactatccg caaagccgtt aaagccgaat
    16621 acaaacatgc aaaacaatcc ggtggtaaag gtcaatacgg tcacgttgtg attgaaatgg
    16681 aacctatgga accgggtggt gaaggttacg agtttatcga tgaaattaaa ggtggtgtga
    16741 ttcctcgcga atttattccg tctgtcgata aaggtatccg cgatacgttg cctaacggta
    16801 tcgttgccgg ctatcctgta gttgacgtac gtatccgtct ggtattcggt tcttaccatg
    16861 atgtcgactc ttcccaattg gcatttgaat tggctgcttc tcaagcgttt aaagaaggta
    16921 tgcgtcaagc atctcccgcc ctgcttgagc cgattatggc agttgaagtg gaaaccccgg
    16981 aagaatacat gggcgacgta atgggcgact tgaaccgccg tcgcggtgtt gtattgggta
    17041 tggatgatga cggtatcggc ggtaaaaaag tccgtgccga agtacctctg gcagaaatgt
    17101 tcggttactc gaccgacctg cgttctgcaa cccaaggccg cgctacttac tctatggagt
    17161 tcaagaaata ttctgaagct cctgctcaca tagctgctgc tgtaactgaa gcccgtaaag
    17221 gctaatcagg caaataggcc gtccgaaagg ctgaaatgat ttttcagacg gcattgttct
    17281 ttaatcgatc tttaatgtaa aggaattagc
//
LOCUS       DAWKOX010000026        16834 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.026, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000026 DAWKOX010000000
VERSION     DAWKOX010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16834
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.026"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(197..1366)
                     /locus_tag="WJK78_000623"
     CDS             complement(197..1366)
                     /locus_tag="WJK78_000623"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ7597578.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGLL
                     PWLRPDAKAQLTVVYDSESGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1549..1659)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1712..2608
                     /locus_tag="WJK78_000624"
     CDS             1712..2608
                     /locus_tag="WJK78_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ7597579.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2652..3716)
                     /gene="tsaD"
                     /locus_tag="WJK78_000625"
     CDS             complement(2652..3716)
                     /gene="tsaD"
                     /locus_tag="WJK78_000625"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ7597580.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     GKPVIPIHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGSMTVQIPTPTGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVK"
     gene            complement(3833..5020)
                     /gene="ccsB"
                     /locus_tag="WJK78_000626"
     CDS             complement(3833..5020)
                     /gene="ccsB"
                     /locus_tag="WJK78_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ7597581.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRTEGKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(5013..6965)
                     /locus_tag="WJK78_000627"
     CDS             complement(5013..6965)
                     /locus_tag="WJK78_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ7597582.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7242..7865)
                     /locus_tag="WJK78_000628"
     CDS             complement(7242..7865)
                     /locus_tag="WJK78_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ7597583.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            8072..8701
                     /locus_tag="WJK78_000629"
     CDS             8072..8701
                     /locus_tag="WJK78_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ7597584.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8822..11218)
                     /locus_tag="WJK78_000630"
     CDS             complement(8822..11218)
                     /locus_tag="WJK78_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ7597585.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11370..12485
                     /locus_tag="WJK78_000631"
     CDS             11370..12485
                     /locus_tag="WJK78_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ7597586.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKLLYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12488..13087
                     /locus_tag="WJK78_000632"
     CDS             12488..13087
                     /locus_tag="WJK78_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ7597587.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            13088..13735
                     /locus_tag="WJK78_000633"
     CDS             13088..13735
                     /locus_tag="WJK78_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ7597588.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13753..14298
                     /locus_tag="WJK78_000634"
     CDS             13753..14298
                     /locus_tag="WJK78_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ7597589.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14317..16602
                     /locus_tag="WJK78_000635"
     CDS             14317..16602
                     /locus_tag="WJK78_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ7597590.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAATPAKQT
                     NIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKT
                     PVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKT
                     FTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQ
                     ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS
                     ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQV
                     MIEARIVEATDGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINL
                     PITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP
                     FTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTIL
                     CISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDR
                     RELLIFITPRIMGTAGNSLRY"
BASE COUNT         4545 a         4783 c         3818 g         3688 t
ORIGIN      
        1 aatttaaacc agtacagcgt tgcctcgcct tagctcaaag agaacgattc tctaaggtgc
       61 tgaagcacca agtaaatcgg ttccgtacta tctgtactgt ctgcggcttc gtcgccttgt
      121 cctgattttt gttaatccac tatataaaaa tgccgtctga actgttcaga cggcattttt
      181 gattttcaaa ccggaattac agccccgctg ccgccctcaa tgcagcagct ttgtcggtgc
      241 gctcccaagt gaactcaggt tcttcgcggc cgaaatgtcc gtaagcggcg gatttactgt
      301 aaatcgggcg caagagatcg agcatttgga cgatgccttt ggggcgcagg tcgaaatgtt
      361 cgcgaactaa ggtaatcagt ttttcctcgc tgattttgcc tgtgccgaaa gtgtcgatgg
      421 aaatcgaagt cggttcggca acgccgatgg cgtaggaaac ttggatttgg cattgggttg
      481 ccaaaccggc ggcgacgatg tttttcgcaa cgtagcggca ggcgtaagcg gcggaacgat
      541 ccactttgga cgggtctttg ccggagaacg caccgccgcc gtgcggagcc gcgccgccgt
      601 aggtatcaac gatgatttta cggccggtca aaccgcagtc gccttgcggg ccgccgatga
      661 cgaagcggcc ggtcgggttg atcaggtatt tggtttcgtc ggtcagcagt tcagacggca
      721 ggacgggctt gataatctgc tcaatgacgg cgtttttcaa ctcttcataa ccgatttccg
      781 ggtcgtgttg cgtagagagg acgacggtat caatgcgttt tactttgccg gattcgctat
      841 cgtaaaccac ggtcagttgg gcttttgcgt cgggacgcag ccaaggcagg aggccgtctt
      901 tgcgtaattc gctttgacgc tgcatcaggc ggtggctgta atagatggca aacggcatca
      961 gggtcggggt ttcgtcgcag gcatagccga acatcaaacc ttggtcgcca gcgccttggt
     1021 tcaagtcaat gccttcgcct tcgttcacgc cttgggcgat gtccggagat tgctggtcgt
     1081 agtacacgcc gaccgcgcag ccgttggcat caaagcccag ctcggaggag ttgtagccga
     1141 tgcgtttgat ggtttcgcgt gcgactttga tgtagtccac ttgggcggtg gtggtgattt
     1201 cgcctgccaa tacgcacaag cctgtgttga ccaaagtttc tgcggcgaca cgcgctttgg
     1261 ggtcttgcgc caagatggca tccaaaatcg cgtcggatac ttggtcggca actttgtccg
     1321 gatggccttc ggataccgat tcggaagtaa acagatattc gctcattgag attttccttg
     1381 aaaaacaaac catcttcttc agacggcatg ttgtatgaac ataatgtcga cagcgggaaa
     1441 tatagcaaaa tttccctatt cataccattc agttgagaaa tattcccatt tgaatggcac
     1501 tttggaatct ctgcccgtac gtttcttaca ggcaaaaaaa ttcccgcatc aagcgggttt
     1561 ggattgctct ggtgagccac atcggctttt caaccgtcca ccttactttt ccttttgaaa
     1621 agcaggttgg catggaattc ccaactctta atgcagcgcg gatggtagca gaaaagcctt
     1681 tccgccgcaa tacttccctt tttcagacgg catgtttcgt ttacaattcg ggctgtttcc
     1741 ccctttgcga accgccatgc acatcctgtt gaccgccctg ctcaaatgcc tctccctgct
     1801 gccactttcc tgtctgcaca cgctgggaaa ccggctcgga catctggcgt tttacctttt
     1861 aaaggaagac cgcgcgcgca tcgtcgccaa tatgcgtcag gcaggcatga atcccgaccc
     1921 caaaacagtc aaagccgttt ttgcggaaac ggcaaaaggc ggtttggaac ttgcccccgc
     1981 gtttttcaga aaaccggaag acatagaaac aatgttcaaa gcggtacacg gctgggaaca
     2041 tgtgcagcag gctttggaca aacacgaagg gctgctattc atcacgccgc acatcggcag
     2101 ctacgatttg ggcggacgct acatcagcca gcagcttccg ttcccgctga ccgccatgta
     2161 caaaccgccg aaaatcaaag cgatagacaa aatcatgcag gcgggcaggg ttcgcggcaa
     2221 aggaaaaacc gcgcctacca gcatacaagg ggtcaaacaa atcatcaaag ccctgcgttc
     2281 gggcgaagca accatcgtcc tgcccgacca cgtcccctcc cctcaagaag gcggggaagg
     2341 cgtatgggtg gatttcttcg gcaaacctgc ctataccatg acgctggcgg caaaattggc
     2401 acacgtcaaa ggcgtgaaaa ccctgttttt ctgctgcgaa cgcctgcctg gcggacaagg
     2461 tttcgatttg cacatccgcc ccgtccaagg ggaattgaac ggcgacaaag cccatgatgc
     2521 cgccgtgttc aaccgcaatg ccgaatattg gatacgccgt tttccgacgc agtatctgtt
     2581 tatgtacaac cgctacaaaa tgccgtaacg aaaataaaaa tgccgtctga acaatttcag
     2641 acggcatttt gtcatttgac gatttccgac agcggccagc gcggacggac attgaacgca
     2701 ccgacctccc tgcccttgcc caggtgcatc gcaccggcaa aggcaatcat ggcaccgttg
     2761 tccgtgcagt atgccgtcgg cgggaaaaac acgctgactt tttcggacgg atgtttcggc
     2821 ttgcctgttg gggtcgggat ttgcaccgtc atgctgccga aagtttcacg gagtttgcgg
     2881 tttgcaccga ccccgccggc gaccactacg gttctgaacc ctgtctgcaa cagggctttt
     2941 ttcactttcg ccgccaacac atcgactacc gcatcttgaa acgcacggca gatgtcgttg
     3001 cgtgtctgct caggaatgtc atccgccccg ttttccgcgc gcactttctc gacggcagtc
     3061 aaaacagcgg ttttcaaacc tgaaaaactc atctgcaaat cgtcggaatg aatcatcggg
     3121 cgcggaaaaa caaacgcttc gggcctgccc gattccgcaa gttccgacag tttcgcaccg
     3181 cccggatacg gcaagcccag cagtttcgcc gttttgtcga atgcctcgcc cgccgcatca
     3241 tcgacgctct cgcccaaaag cgcgtagtcg cctatgcccc tgaccgccat aatctgcgta
     3301 tgcccgcccg aaaccagcag cgcgacaaaa ggaaagtcgg gtttttcctc cgccaacagc
     3361 ggcgacagca gatgtccttc caaatgatgg atggggatga cgggcttgcc caatgccaaa
     3421 gccagtgcat tggcgtagct cgaacccgcc agcagcgcac cgcccagacc gggtccctgc
     3481 gtaaaggcaa ccgcgtcaat gtcgccatac gatgcacccg cctgcgccaa acagccttcc
     3541 gtcaacggaa caaggcggcg gatatggtcg cggcttgcca attccggcac aaccccaccg
     3601 tattcggcgt gcattgccat ttgagtgtgc aggcagtgcg cccgcaatcc tcgttccgta
     3661 tcgtaaagcg caacgccggt ttcgtcgcaa gaagactcga ttcctaatac caacatggtc
     3721 tgatgccgtt aaaaactgaa aaacgtattt tagcggattt cggcacgact gccgtatccc
     3781 aaaaacggaa catgccgtct gaagaccgtt cagacggcat cgtcgcaccg tatcaaagcg
     3841 ttccgtaaga atgcagcccg ctcaaaaaca tattcacgcc gataaaggca aatgcggtta
     3901 cgaacaaacc gataatcgcc caccacgcca gcactttgcc gcgccaaccg gcaaccagcc
     3961 gcaagtgcag ccaaacggcg taattgagcc agacgatgaa cgcccacgtc tctttcgggt
     4021 cccaactcca atagcgtccc caagcatccg ccgcccacag cgcacccaaa atggtggcaa
     4081 tggtaaagaa cagaaagccg acggcaatcg ccttatacat aacttcctca atcaacacgg
     4141 attgcggcag ccacgatttc ccgccttttc cttccgtacg cagggaaacc agttcggcaa
     4201 taccgagcat cgcggaaatg caaaacgcgc cgtaaccgat aaagtttgcc ggaacgtgga
     4261 ttttcatcca ccaagattgc aatgccggaa tcagcggctg gatggtatgc gcctcgcggg
     4321 acacgctgta ccacaagaca aatccaacca cgaccgccat aaagccgaac acgaagccgc
     4381 ccaatttctg tatggcgaac ttaccttcat aataaagata catcagcgcg gtaatcacca
     4441 aaaacaggat gaacacttca tacaggttgg aaaccggaat atgccccgca tcgggacgga
     4501 gcagatagct ttcgtgccaa cgtaccagca gaccggtaaa gcctgctacg gcagacaccc
     4561 atgcaaacac ggttcccata cccaacagcg tgttggtcgg cacatttttt acgcttgcca
     4621 aaaccgcgcc cgaaatatag gcgaacaggg cgaagaagac aaaggcgcac tgccacataa
     4681 tcgccgactg gctgctgagg aaataccgca acaggaaaat ctctgccgat ttgatgttgc
     4741 cgccatacaa accgacggcg gcataggcaa gcaatacgct taaaggaaca aaccagcgca
     4801 tcggcttgaa aaaccagccc aaaaatacgg caataccggc actcgcccac aacatgaccg
     4861 tttcgtaaat gtccatatgc ataccggaac gggtctgtac gaaaaccgta gccgcaaaaa
     4921 ccagcacggc aaatacccaa tcccaaagat tcagattgct gatcaaagac ttctgaatca
     4981 gcagctcgtg ttccggaagg gttttatagt gttcagtcat gattcaagtc cttgccgagc
     5041 cgttgcagac tctcgacgtg ttttggaaat tccttctgca aatcccgttc gctgcgggcc
     5101 gaagacatgg caaaacggat tttgccgtct gaaaacaata cccacgcccg tttttcgcgc
     5161 acataaaaca tcaataccgt acccaatacc aacagcaccg agccgagata gaccaaaagc
     5221 gcacccgggg aacgggtcat ctgcaaaccc gacgaacgca cctcggaaaa cccatcaagt
     5281 tgcagcagca taggcgcggg atattcggtc aaacccgtgt acgcatccat actgtgcagc
     5341 aggaaacggt tccgcgcttc atcctgctgc cattcgggca agccgtaccg gcgtatggtt
     5401 tcatccaaag cagcgttcat cacgccgtaa agcatttcgt agaaataacc ctgcatctta
     5461 tcctgctgct ctttcggaat attggacgta ataaattcgt ccaatcccaa atagcctttt
     5521 tgtgcaaaga tgttcagcgt gttttccgca gccagcatga attgttcgcg gatttcggca
     5581 ggtgcgtctt tggttgcgtc ggcaaccaga cgtttgcgcc cttccccatc tttcaaaaac
     5641 tcgcgcaatg ccataaaggt gtccgctttc aactgcttgt ccaaggggat acgcagccag
     5701 cggtattgct gctgcaagcc gctgcgcgtg ccggtaatcc aaaaataatc ctgttcctgc
     5761 aaaaccggca gcatatagtt tttatattcg accgcctgcc ctgccgcatc acggatacgg
     5821 taaacaatgg aagggccgat attggtgtat tttttacctt cctgagtaac ggcgcggaca
     5881 tcgttcagcg tggatttcag gcttttttcc cgttccgcgc cctcgctcat gtcctccaca
     5941 ttcatagaag tgaactgatc gaactcaaga cgatatttgt gtttgccaat ttccaacgga
     6001 aactggtgta tggatgttgc cttcaacacg acaggctcgc gcgaagcatc acccaaattc
     6061 cacgccttga atgtcaaatc cgaaccgccg tcggcaaaac tcgcctgata aatcgtgatg
     6121 ccgtgcaagg tcaaaggatg gttcacgcgg atggtgcgct cgagtttctc accggttgcc
     6181 ttatccgtta cttcaatatc actggcaaaa tcgcgcggca tacccgtatt gtaaaaatcg
     6241 atatggaatt ttttcagttt gacttcaaaa ggcaagtcct gaaccaatat cccgttgtcg
     6301 gcattcagga aaaccacatc cgcactctgc ccctcggaaa tattgacgtt gcccctaaat
     6361 gagagattgg acgcacccaa aatactttcg ggcttgaaat ccttggcata aaccgcctga
     6421 ttgtccggaa caatccgacc ggtcagcata cccagtttca acagcaggtt actgtctatc
     6481 aacccgccca ggcaaatgac aatcaaagca acatgggcaa agatatagcc ccatttgttc
     6541 attgtgcctt ttttggcggc aatcagaacc gacccgtctt cacggttaat ggtttttccc
     6601 tgaaaacctt gtacttccag ataacgtttg gcaacctcgg gcgcaatttt tacatccaac
     6661 agcgaagaat ggcgcatcgc cgccagagat ttttctttaa ccttttcccg aaaagacttc
     6721 atttcgcgcc agaacggcgg cacattgcga atcaggcaca aactggtaga aaccaccaaa
     6781 aacatcatga taacgacaaa ccatgccgaa gcatagacgt catacagtcc cagaaaacca
     6841 aaaatctgcg cccaaaacga tccgaatttg accaaataat ccgtctgcgg ctggttttgc
     6901 tgcaacaccg taccgataac cgatgcaata cccagcagac tgagcaaagc gactgcaaag
     6961 cgcatggagc tgaaaaaagc gaaccacgga cgggaaagaa gtgggggaga tctacgggat
     7021 ttactcattg tgtgtttatt ccgccatcag gaatatggga aagcagaatt gggcaaacag
     7081 aaaacaacgt cccgattcta ctgtcttgat gctttttatt tcaagacaat gaagacagcc
     7141 tgcatcgatt ccaacggttg cgattgaaaa aacttatcgc agaattgcct gaagccgtct
     7201 gaaaactttt cagacggcct ctaaaacaga ctattgcgga attaacgcaa accttggata
     7261 aagttggcga ccgctttcaa atcttcttca gacatacggt ttgcaatatc ttccatgatg
     7321 gtatttttac gctgaccgga cttgtaggca ttcatctgtt caacaatata tgcctgatgc
     7381 tgaccgccca aacgcggata agcctgaatt tcgcttccgc ctcccggcat acccgcaccg
     7441 ctcggaccgt ggcaggacat acacgccggc acttttttat cgctcaaacc gccgcgatag
     7501 attttcgcac ccaattcggg attttcctta ggattggctt caccggattt gggctgctgt
     7561 ttggcataga atgcggatac gttcaaaata tcctgatcgc tcaaattcat taccaccggt
     7621 ttcatcacag ctgccgaacc gtgggtgcgt ttaccgtcgc ggatgccgat agtttgatga
     7681 tagatgtaag cagtatgctg tgccgccaaa cgcggataca tcgcaatgcc gctgttaccg
     7741 tctgctgcat ggcaagccgc acaaaccgtt gcggcaacct gtttgccttt ttccacgtct
     7801 gctttgggag aggcggaaac cgcaccggca gccaaaacaa aggccaataa agtcaatcgt
     7861 ttcatggagt gctcctgatt acagcattgg ataacgcaac aatgctcttt attatattca
     7921 aatacgggat ttttgacccg attaaaaccg atgattctgt aaacgtgtta ttctatacta
     7981 aatttacatt aaattaccac tgtgtttcac ataaaaccaa ccgcatattt ttgctgtcgg
     8041 acaaacggcg gcggaaaaca aggatatgcc catgaacctt tttcaaaacg ccaaattctt
     8101 cacgacggtc aaccacctta aagacctgcc cgacacccct ctcgaaattg cctttgtcgg
     8161 caggagcaat gccggaaaat ccagtgccat caataccctg accaaccatg tccgtcttgc
     8221 ctacgtttca aaaacacccg gacggacgca gcatatcaac ttcttcgagc tgcagaacgg
     8281 caattttatg gtcgatttgc ccggctacgg ttatgcccaa gtccctgaag cagtacgcgc
     8341 acattgggtc aatctgctcg gcgactatct gcaacagcgc aaacagctta tcgggctggt
     8401 tttgattatg gatgcccgcc atcctttaaa agaactcgac atccgtatgc tggatttttt
     8461 ccacacgacc ggcagaccgg ttcacatcct gctgtcaaaa gccgacaaat tatccaaaaa
     8521 cgaacagata aaaaccctgt cccaagtcaa aaaactgctc aaaccttatt ccgacaggca
     8581 aaacatcagc gtacagctgt tttccagcct gaaaaaacaa ggtattgacg aggccaaccg
     8641 aactgtcgga agctggtttg acgcagcaga tgccgccgct tcctctccag aggaaaactg
     8701 accccaatta tacggaaacc gtatttcccc cacttgaccg accgcaaaca tttaaaaaat
     8761 tgccactgcc aaatctaaaa tgccgtctga aagacttttc agacggcatt ttgcggagtc
     8821 tttaaaacag agaatccaac tgctgctgtt tggaaccagt attactcgga agcaccggcg
     8881 tttcctgcat atcttggcgg acttcgtcat ccgccgcctg ccgtccgcct tctgccgcgc
     8941 ccccgtcatc ttcttttgcc cgtcgggaag gttgcggcgc aataccgctg ttgtccagcg
     9001 tcaagcccgg atcggttacc atacgttcct tcatatagta ttcgccattg ctgctgacca
     9061 caccttcagg cattttcatc cccttgccct gctttccttt caacgcaaaa cgcatatagt
     9121 ccacccaaac cggcaccgca atcgtaccgc cgtagccgac acgccccata ctcttaggtt
     9181 tgtcgaagcc gatatatacg gcagtaacca catcagggtt aaaaccgaca aaccacgcat
     9241 ccttattgtc attggtcgta cccgttttac cggcaatatc cgttcttccc aacgcagctg
     9301 ccccccttgc cgtaccgaca cggaccacat cctgcataat cttatacata atataggcat
     9361 tgcgcggatc gattgcctga ggcgcatttt gcccggccac caaaggttgc atttgggcgc
     9421 gcaacctgcc gtctctgtca taaatcttat cgattacgtg cgaagaaacc ctatatccgc
     9481 cgttcgcaaa tacgctatat gcctccgcca ctttcaacgg cgttgtctcg cccgtaccta
     9541 aagccataga caggcttgcc ggcagctcgg acgacctgaa gccgaaacgc cggatatact
     9601 gttgcgcgta accgacaccg atagacatca aaatacggat ggaaaccata ttcttggaag
     9661 ccgtcagagc ctgtctcaaa gtaatgtagc cggaatatct gccgtctgaa tttttaggtg
     9721 tccaaaccga accgttcggc cctttccccg gcagggaaat cggcgcatcg ttaaccaccg
     9781 tggacgcggt catcccctta gataatgccg ccgaatagac aaacggctta aaggtcgaac
     9841 ccggctgccg cattgcctga acggcacgat tgaatgtttt gctgtgaaaa tcataaccgc
     9901 cgaccagcgc gcgcacagct ccggtttttg catccagcga aaccaaagcc ccctgcagca
     9961 acggctcttg aaccaccgcc caacgcccgc cgttgttttt gacacggatg accgcgcccc
    10021 tgcggatacg gtcctccccc attttttcat tattgaccgc gcgggccgca aagcccaagg
    10081 cgcgcctgtc aagcgtaacc cgcctgccgc cgggcagctg tatgacgaca tttttctttt
    10141 tagtcacatc caacacaacg gcgggaacca ttttatcgac ggtatagagt cccgacagat
    10201 actggctgac agtctcctcg acatcttcac tcttactcaa atcgatatag ttttccgcac
    10261 cgcggtagct gctgccgcga tcgaaattcc gtagagcctt gcgcaatgcc tcggttgcca
    10321 ccttctgatg atcggcgcgg accgtggtat aaaccttaaa accctgcgta taggcatctt
    10381 caccgtattt ctcatacagt tcctgacgca ccatttccgc cacatataaa gcactctgat
    10441 cgattttccg aacaaaccgc tcgtaatgca gttcctcatt caacgcctga tcgcgctgtt
    10501 gcacggtaat catcttctcc tcgagcatat tgttcaaaat atacttctgg cgcaacttgg
    10561 cacgttctgg attaacaatc ggattatagg cagacggagc cttgggcagt cccgcaagca
    10621 tggcggcttc cgccaaagtc aaatctcgga cattcttatt gaaatagatt tgcgcggcag
    10681 atgcaaaacc ataggcgcgc tgaccgaggt aaatctgatt gaaatacaac tcgaggattt
    10741 tgtctttgct taaagactgc tcgattttat aggcaagcaa cacctcattg aatttgcgtg
    10801 tgaacgtttt ttcactgctc aaataaaaat ttttcgccac ctgctgcgta atcgtactcg
    10861 cacccgactg cacgctgccg gacacgacat tgccgacggc agcgcgggca acaccccaaa
    10921 catccacccc ccaatgccgg taaaagcgtt tatcctcggc ggcgataacc gcattccgca
    10981 acacctctgg gaaatcgccg atttttgtaa attcgcgccg ctgctcccca tacataccga
    11041 tgacttcccc atccgccgaa taaatagtca acggcatttt aggctggtaa tgctgcaaag
    11101 aatccaaaga cggcagtttc ggatacgtta ccaaaatagc aatggcaacc aaacccactc
    11161 caaatacaca aaacccaaaa accaaaccaa aacaagtcgt taaaatcttt ttaatcatag
    11221 ctgaataata atttaccatt attggtatta aataaagtaa aatagcaacc gatttctaca
    11281 aagcacggtt tcaatgtgca aagaacaagg aatccattac ggataccgaa acggttactc
    11341 actgtacaaa taaagcagga actttcatca tgcgcttgtt taaaagcttg aaaaacccta
    11401 aaaaaacaga tgccaagctc cctaaaaaat cttcgggact caataaccgc gcggcaatcg
    11461 gcatcgatat cgaccagcat tccatcaaaa tggtccaatt gtcaggacgt agtttaaacc
    11521 aaattcaatt ggaaaaatac gtcattgcca aattaccaaa gaatatcatt caaggcaata
    11581 aagtccaaaa ttacgatcaa cttgttacat atttgcaaca agcctatgcc aaactgggta
    11641 cttcgtgcaa aaacatcatc gcgtccgtcc cgcaaaatct ggcaaccatc gaacaattga
    11701 cctacacaga caaagatgca gaattagacc tgcaggggtt cgtggagtcc tccatctccg
    11761 aagtcagctc gatatcgctc gaagaagcca attacgacta tcaggtcttg tcccaatcgg
    11821 ccgccggcga agctgtgttg gccgtcgcat cgagaaagga tgaaatcgaa cccctgattg
    11881 acgcattcaa cgccgccggt atgaaattat ccgcgcttga tgtggacatt ttcggacaat
    11941 acaacgccta cgcgctatgg ataaaccatt tcgcccccga gcttgcggcc gaaaaagtcg
    12001 ccattttcgg cgtatatgcc gcacagacct acgccttggt catccaagac ggaaaactcc
    12061 tatacaaaca ggaaacctcc gtcagcgaag aacagctcaa ccaactcatc cagcgcacct
    12121 atcaggtaac agaagaaaaa gcggaagaaa tcatcaactc cccgcaaaaa ccttccgatt
    12181 accaagaaag cgtggcaaac tatttcaacc agcagattac ccaagaaata caaagggtct
    12241 tgcagtttta ttacaccacg cagaccgcag acgatatgac cgacatcaag catatcctgc
    12301 tgaccgggga agcggcgcgc caggaaggca tcgcccaaac cgtcgcctca caaaccaatg
    12361 cagatgtaca atgcgtccat cccgcgcgtt attttgcgga caacctcaaa acagacaaac
    12421 aacaattcga acttgatgcg ccgacactga ccagggcgtt cggtttggcg gtacggggat
    12481 tataattatg aacaatttaa tcaaaatcaa cctcctcccc tacagggaag agatgaacaa
    12541 gcgcaaacag cagcagttta aaacgctgat gtacggtgcc gtgctgacgg gcgttgccgc
    12601 cgttgcggca acctacctgt ttatcgacaa tatgatcaat aaccagtcgg aaagaaacac
    12661 gctgctggaa acctccatcg cacacttgga taccgagctg tcggaaatac aaaagctcaa
    12721 acaggaaaaa gatgccttcc tgattaagaa aaacaaaatc gaggagctcc agctcaaacg
    12781 cctccaagcc gcaaaaatcc tcgacagcct gaatgaggcc gtccccggaa gcacctacct
    12841 gacctcgctg gatgccgtta ccgccgactc ttatcggctc agcggcagga catccagcga
    12901 caaccgcgtt gccgccatga tgagggcgat gcccaatacc ggcatattca agcaacccga
    12961 attgttaagc atcaagaaaa acaattcgca tcaagaattt acccttcagg caacattaca
    13021 acccatcgta aaggcggccg aatccaaaga gaatccggct tcgggaaacg cacaggaggc
    13081 aaactgaatg gcttctaaat catctaaaac caacttggat ctcaacaacc ttcacctgct
    13141 caaccttcct gccaggcttt ttatcgccct gctggccgtt gccgccgtgc tggggctcgg
    13201 ttatgccgga ttgttcaaaa gccagatgga atcccttgag gaatacgaag caaaagaaac
    13261 cgaactgaaa aacacctaca aacagaaaag tatcgacgcg gccagcctga acaacctgag
    13321 ggacgaactt gcctcaatcc gctctgcctt cgatatcatg ttgaaacagc tgccgacaga
    13381 tgcagaaatt cccaacctgg ttcaagagct tcatcaggca ggttcgagca acggcctgcg
    13441 cttggacagc gttatgcccc aacctcccgt agatgacggc cccatcaaaa gattacccta
    13501 ttccatttcc attaccggaa attacgaaca gatcagccaa tttacccgcg atgtcggcag
    13561 cctctcccga atcattaccc ttgagtcgct gaaaatcgcc caatctccgg aaaacggcgg
    13621 caatcctgac ggcaagagca gcatcctgaa cctcagtgcc attgccacca cctaccaagc
    13681 aaaatccgta gaagagcttg ccgcagaagc ggcacaaaat gccgagcaaa aataacttac
    13741 gttagggaaa ccatgaaaca ctatgcctta ctcatcagct ttctggctct ctccgcgtgt
    13801 tcccaaggtt ctgaggacct aaacgaatgg atggcacaaa cgcgacgcga agccaaagca
    13861 gaaatcatac ctttccaagc acctaccctg ccggttgcgc cggtatacag cccgccgcag
    13921 cttacagggc cgaacgcatt cgacttccgc cgcatggaaa ccgacaaaaa aggggaaaat
    13981 gcccccgaca ccaagcgtat taaagaaacg ctggaaaaat tcagtttgga aaatatgcgt
    14041 tatgtcggca ttttgaagtc cggacagaaa gtctccggct tcatcgaggc tgaaggttat
    14101 gtctacactg tcggtgtcgg caactatttg ggacaaaact acggtagaat cgaaagcatt
    14161 accgacgaca gcatcgtcct gaacgagcta atagaagaca gcacgggcaa ctgggtttcc
    14221 cgtaaagcag aactgctgtt gaattcttcc gacaaaaaca ccgaacaagc ggcagcacct
    14281 gccgcagaac aaaattaaga agaggattac tccattatga ataccaaact gacaaaaatc
    14341 atttccggtc tctttgtcgc aaccgccgcc tttcagacag catcggcagg aaacattaca
    14401 gacatcaaag tttcctccct gcccaacaaa cagaaaatcg tcaaagtcag ctttgacaaa
    14461 gagattgtca acccgaccgg cttcgtaacc tcctcaccgg cccgcatcgc cttggacttt
    14521 gaacaaaccg gcatttccat ggatcaacag gtactcgaat atgccgatcc cctgttgagc
    14581 aaaatcagtg ccgcacaaaa cagcagccgt gcgcgtctgg ttctgaatct gaacaaaccg
    14641 ggccaataca ataccgaagt acgcgggaac aaagtttgga tattcattaa cgaatcggac
    14701 gataccgtgt ccgcccccgc acgccccgcc gtaaaagccg cgcctgccgc accggcaaaa
    14761 caacaggctg ccgcaccgtc taccaagtcc gcagtatccg tatccaaacc ctttaccccg
    14821 gcaaaacaac aggctgccgc accgtttacc gagtccgtag tatccgtatc cgcaccgttc
    14881 agcccggcaa aacaacaggc ggcggcatca gcaaaacaac agacggcagc accagcaaaa
    14941 caacaggcgg caacaccagc aaaacaaacc aatatcgatt tccgcaaaga cggcaaaaat
    15001 gccggcatta tcgaattggc tgcattgggc tttgccgggc agcccgacat cagccaacag
    15061 cacgaccaca tcatcgttac gctgaaaaac cataccctgc cgaccacgct ccaacgcagt
    15121 ttggatgtgg cagactttaa aacaccggtt caaaaggtta cgctgaaacg cctcaataac
    15181 gacacccagc tgattatcac aacagctggc aactgggaac tcgtcaacaa atccgccgcg
    15241 cccggatact ttaccttcca agtcctgccg aaaaaacaaa acctcgagtc aggcggcgtg
    15301 aacaatgcgc ccaaaacctt cacaggccgg aaaatctccc ttgacttcca agatgtcgaa
    15361 atccgcacca tcctgcagat tttggcaaaa gaatccggga tgaacattgt tgccagcgac
    15421 tccgtcaacg gcaaaatgac cctctccctc aaagacgtac cttgggatca ggctttggat
    15481 ttggttatgc aggcacgcaa cctcgatatg cgccagcaag ggaacatcgt caacatcgcg
    15541 ccccgcgacg agctgcttgc caaagacaaa gccttcttac aggcggaaaa agacattgcc
    15601 gatctgggcg cgctgtattc acaaaacttc caattgaaat acaaaaatgt ggaagaattc
    15661 cgcagcatcc tgcgtttgga caatgccgac acaaccggaa accgcaatac gcttgtcagc
    15721 ggcaggggca gcgtgctgat cgatcccgcc accaataccc tgattgttac cgatacccgc
    15781 agcgtcatcg aaaaattccg caaactgatt gacgaattgg acgtacccgc gcaacaagtg
    15841 atgattgagg cgcgtatcgt cgaagcgaca gacggcttct cgcgcgattt gggcgttaaa
    15901 ttcggcgcga caggcaagaa aaagctgaaa aatgatacaa gcgcattcgg ctggggggta
    15961 aactccggct tcggcggcga cgataaatgg ggggccgaaa ccaaaatcaa cctgccgatt
    16021 accgctgccg caaacagcat ttcgctggtg cgcgcgattt cctccggtgc cttgaatttg
    16081 gaattgtccg catccgaatc gctttcaaaa accaaaacgc ttgccaatcc gcgcgtgctg
    16141 acccaaaacc gcaaagaggc caaaatcgaa tccggttacg aaattccttt caccgtaacc
    16201 tcaatcgcga acggcggcag cagcacgaac acggaactca aaaaagccgt cttggggctg
    16261 accgttacgc cgaacatcac gcccgacggc caaatcatta tgaccgtcaa aatcaacaag
    16321 gactcgcctg cgcaatgtgc ctccggtaat cagacgatcc tgtgtatttc gaccaaaaac
    16381 ctgaatacgc aggctatggt tgaaaacggc ggcacattga ttgtcggcgg tatttatgaa
    16441 gaagacaacg gcaatacgct gaccaaagtc cccctgttgg gcgacatccc cgttatcggc
    16501 aacctcttta aaacacgcgg gaaaaaaacc gaccgccgcg aactgctgat tttcattacc
    16561 ccgaggatta tgggtacggc cggcaacagc ctgcgctatt gatgcgtcaa aataagggca
    16621 tatgttttac ggcatatgcc ctttctttat gctttttgcc gcgaccgaaa tgccgtcatt
    16681 cccgcgcagg cagaaatcca acttgtccgg ttccggttgt ttttcgtctc gtaacttttg
    16741 agccgtcatt cccgcgcagg cagaaatcca gtccgttcag tttcggtcat ttccgataaa
    16801 ttcctgttgc ttttcatttc tggattccca cttt
//
LOCUS       DAWKOX010000027        16518 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.027, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000027 DAWKOX010000000
VERSION     DAWKOX010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16518
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.027"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            279..1343
                     /locus_tag="WJK78_000636"
     CDS             279..1343
                     /locus_tag="WJK78_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ7597591.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1484..1807
                     /locus_tag="WJK78_000637"
     CDS             1484..1807
                     /locus_tag="WJK78_000637"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ7597592.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1879..2202
                     /locus_tag="WJK78_000638"
     CDS             1879..2202
                     /locus_tag="WJK78_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ7597593.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2249..2452
                     /gene="tatA"
                     /locus_tag="WJK78_000639"
     CDS             2249..2452
                     /gene="tatA"
                     /locus_tag="WJK78_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ7597594.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2456..3142
                     /gene="tatB"
                     /locus_tag="WJK78_000640"
     CDS             2456..3142
                     /gene="tatB"
                     /locus_tag="WJK78_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ7597595.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKEIGTDMEGNLHDISNGLKPWEKLP
                     EQRTPADFGVDENGNPLPDAANTLSDGISDVMPSERSYASAETLGDDRQTGSTAEPAE
                     TDKDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSR
                     AKPKLRVRKS"
     gene            3156..3926
                     /gene="tatC"
                     /locus_tag="WJK78_000641"
     CDS             3156..3926
                     /gene="tatC"
                     /locus_tag="WJK78_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ7597596.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWMVIGILVCFFGMMPFAQQ
                     LYTFIANPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTGQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3979..4587
                     /gene="maf"
                     /locus_tag="WJK78_000642"
     CDS             3979..4587
                     /gene="maf"
                     /locus_tag="WJK78_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ7597597.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYQVVKLPANIDETVRQNEDPARY
                     VQRMAEEKNRTALTLFCETNGTMPDFPLITADTCVVSDGIILGKPHSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGNAENRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRSPLSALKP"
     gene            4596..4949
                     /locus_tag="WJK78_000643"
     CDS             4596..4949
                     /locus_tag="WJK78_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ7597598.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4939..6753
                     /locus_tag="WJK78_000644"
     CDS             4939..6753
                     /locus_tag="WJK78_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
                     /protein_id="HEZ7597599.1"
                     /translation="MPAETTVSGARPAAKLPIYILPCFLWIGIIPFTFALRLQPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPPISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACRSLVAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPL
                     FQNIIVYSGQGVIGHIGQRNNLGHYLMWGILASAYLNGQRKIPAALGVICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVLLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPAPDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YTDEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6943..7620
                     /locus_tag="WJK78_000645"
     CDS             6943..7620
                     /locus_tag="WJK78_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ7597600.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7633..9039
                     /locus_tag="WJK78_000646"
     CDS             7633..9039
                     /locus_tag="WJK78_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ7597601.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIVVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAHPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SVDGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9157..11583
                     /locus_tag="WJK78_000647"
     CDS             9157..11583
                     /locus_tag="WJK78_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ7597602.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSSDWLNRFGHSLHTKTAVLHYNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALAAANPSLLAEAL
                     HLPPYRHTTHNAVQFQFGSHPLYGDILTACCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTVIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     HLKTLSLKNNTTVTITPLLPEDAEAKQQFVRSLSPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTARDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLHTDHKIT"
     gene            11628..11873
                     /gene="rpsP"
                     /locus_tag="WJK78_000648"
     CDS             11628..11873
                     /gene="rpsP"
                     /locus_tag="WJK78_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ7597603.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11889..12398
                     /gene="rimM"
                     /locus_tag="WJK78_000649"
     CDS             11889..12398
                     /gene="rimM"
                     /locus_tag="WJK78_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ7597604.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKT
                     ITADWGLDY"
     gene            12398..13147
                     /gene="trmD"
                     /locus_tag="WJK78_000650"
     CDS             12398..13147
                     /gene="trmD"
                     /locus_tag="WJK78_000650"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ7597605.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKTQSSQAAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLETIRQEQREIQS"
     gene            13163..13528
                     /gene="rplS"
                     /locus_tag="WJK78_000651"
     CDS             13163..13528
                     /gene="rplS"
                     /locus_tag="WJK78_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ7597606.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVISRRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13846..14571
                     /locus_tag="WJK78_000652"
     CDS             13846..14571
                     /locus_tag="WJK78_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ7597607.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14607..15482
                     /locus_tag="WJK78_000653"
     CDS             14607..15482
                     /locus_tag="WJK78_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ7597608.1"
                     /translation="MNPYDLLITPFAEFDFMRYALVSVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSTLTLLTLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15559..16473
                     /locus_tag="WJK78_000654"
     CDS             15559..16473
                     /locus_tag="WJK78_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEZ7597609.1"
                     /translation="MKHPKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEYDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETSVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4280 a         5285 c         3630 g         3323 t
ORIGIN      
        1 ttagagaatc gttctctttg agctaaggcg aggcaacacc gtactggttt ttgttaatcc
       61 accataaatg ccatctgaag ccgattcggt tttcagacgg catcattatt tgacctgacg
      121 caaacagaaa gccttccgcg tgcttaaaca catctcttgt agtaaaatat ctaaacagat
      181 tcaactggaa acggtcaggc ttcttcacgc cattcccatt tcaaccgccg cctgccagat
      241 tcagacggta ttcctacttg aaaacaagga gcgttacaat gaaagcagca cgtttttacg
      301 ataaaggcga catccgcatc gaagacatcc ccgaaccgac cgtcgccccc ggcactgtcg
      361 gcatcaatgt cgcctggtgc ggcatctgcg gtactgacct gcacgaattc atggaaggcc
      421 cgattttcat tccgccttgc ggtcatccgc acccgatttc cggcgagtcc gcacccgtaa
      481 cgatgggaca cgagttctcc ggcgtggtct atgccgtcgg cgaaggcgtg gacgacatca
      541 aagtcggcca acacgtcgtg gtcgaaccct acatcatccg cgatgacgta ccgaccggag
      601 aaggcagcaa ctaccacctc tctaaagaca tgaacttcat cggcttgggc ggctgcggag
      661 gtggcttgtc tgaaaaaatc gctgtcaaac gccgttgggt gcatccgatt tccgacaaaa
      721 tcccgttgga tcaagccgct ttgatcgaac cgctgtctgt cggacaccac gcctatgtac
      781 gcagcggcgc gaaagcaggc gacgtcgcat tggtcggcgg cgcaggtccg atcggtttgc
      841 tgttggctgc cgtgttgaaa gccaaaggca tcaaagtcat catcaccgag ttgagtaaag
      901 cacgcaaaga caaagcgcgc gaatccggcg ttgccgacta catcctcgac ccgtccgaag
      961 tcgatgttgt cgaagaggtg aaaaaactga ccaacggcga aggcgtggac gtggcattcg
     1021 aatgtaccag cgtgaacaaa gtgttggata ctttggtcga agcctgcaaa cctgccgcca
     1081 atttggttat cgtatccatc tggagccacc ctgcaaccgt caacgtccac agcgtcgtga
     1141 tgaaagagct ggatgtgcgc ggcacgattg cctactgtaa cgaccacgcc gaaaccatca
     1201 aactggtcga agaaggcaaa atcaacctcg aacccttcat cacccagcgc atcaagctgg
     1261 acgaactggt ttccgaaggc ttcgagcgtc tgatccacaa caacgaatcc gccgttaaaa
     1321 ttattgtgag tccaaacctg taagcaaatt acatttgcaa cagcacaaat gccgtctgaa
     1381 acgctcagac ggcattttcc aacgaagcgc aacaggcgta ttgcccgaga gcagccgttt
     1441 agcctatcat tccgaacaaa cagaaacaaa cagaaggaaa atcatgggag attccgtact
     1501 atccgccatc caacaaacca tcacccagcg aaaatctgcc aatccgtccg aatcttacgt
     1561 cgcacagctc ttgcacaagg gcgaggacaa aatcctaaaa aaagtgattg aagaggcggg
     1621 cgaagtgttg atggcatcca aagacaaaaa cccgtcccac ctggtttacg aagttgccga
     1681 cttatggttt cacaccatga ttcttctgac acaccacgac ctgaaggcgg aagacgtatt
     1741 ggacgaactt gcgcgccgcc aaggtttgtc gggcttggcc gaaaaagccg ctcgcacaga
     1801 atcttgaatt tatattaaaa tccgcacttt cccacattca atccgtctga ccgcttttca
     1861 gacggcaacg gagccgttat ggacaactgt attttctgca aaatcgccgc caaagacatt
     1921 ccggcgcaaa ccgtctatga agacggcgaa atggtttgtt tcaaagacat caaccccgcc
     1981 gctccggttc atctgctgct gattcccaaa gtccatttcg attcgttggc acacgccgcg
     2041 cccgaacatc agcccctttt gggaaaaatg atgctgaaag ttcccgaaat cgccaaagcg
     2101 gcaggactgg cagacggctt caaaaccctg atcaacaccg gaaaaggcgg cggacaagag
     2161 gtcttccacc tgcatataca catcatgggc acacccgtat aaaccgttat ttcacaatca
     2221 acccctaata cttacttaag gatacatcat gggcagtttt tctctgacgc actggattat
     2281 cgtactgatt atcgtcgttt tgatattcgg caccaaaaaa ctgcgcaacg tcggcaaaga
     2341 cctcggcggt gcggttcatg acttcaaaca ggggctgaac gaaggtacag acggcaaaga
     2401 agcccaaaaa gacgatgtaa tcgaacacaa aaaagacgaa gacaaagcgt aatttatgtt
     2461 tgatttcggt ttgggcgagc tggtttttgt cggcattatc gccctgattg tcctcggccc
     2521 cgaacgcctg cccgaggccg cccgcaccgc cggacggctc atcggcaggc tgcaacgctt
     2581 tgtcggcagc gtcaaacagg aatttgacac gcaaatcgaa ctggaagaac tgaggaaggc
     2641 caagcaggaa ttcgaagctg ccgccgctca ggttcgagac agcctcaaag aaatcggtac
     2701 ggatatggag ggtaatctgc acgacatttc caatggtctg aagccttggg aaaaactgcc
     2761 cgaacagcgc acgcctgccg atttcggtgt cgatgaaaac ggcaatcccc ttcccgatgc
     2821 ggcaaacacc ctatcagacg gcatttccga cgttatgccg tccgaacgtt cctacgcttc
     2881 cgccgaaacc cttggggacg acaggcaaac cggcagtaca gccgaacccg cggaaaccga
     2941 caaagaccgc gcatggcggg aatacctgac tgcttctgcc gccgcacccg tcgtacagac
     3001 cgtcgaagtc agctatatcg ataccgctgt tgaaacccct gttccgcata ccacttcgct
     3061 gcgtaaacag gcaataagcc gcaaacgcga tttgcgtccc aaatcccgcg ccaaacctaa
     3121 attgcgcgtc cgtaaatcat aaagagagca atccggtgtc cgaaacacaa aacgaacaac
     3181 ccgtccaacc gcttgtcgag catctcatcg agctgcgccg ccgcctgatg tggatggtta
     3241 tcggcattct cgtctgcttt ttcggcatga tgccgtttgc ccaacaactc tatactttta
     3301 tcgccaaccc gctgatggca aacctgccca aagacaccag catgattgcc accgatgtca
     3361 tcgcaccgtt tttcgtgccg gtcaaagtta ccctgatggc ggcattttta atttcgctgc
     3421 cgcatacgct ctaccaaatc tgggcatttg tcgcccccgc actctaccaa aacgaaaaac
     3481 gcctgattac gccgctcgtc ctctccagcg tcagcctgtt tttcatcggt atggcatttg
     3541 cctacttttt ggttttcccc gtcattttca aattccttgc cggcgttacc cctgtcgggg
     3601 tcaatatggc gacagacatc gacaaatacc tctccttcat cttggggatg tttgtcgcat
     3661 tcggtacaac gtttgaagtc cccattgtcg ttatcctgtt aaccaaaatt ggtgtggtaa
     3721 caaccggaca gctcaaacgc gcccgcccct atgtgattgt cggcgcgttt gtcattgccg
     3781 ccatcatcac gccgcccgat gtgatttcac aaaccctgct tgccattccg ctgattctct
     3841 tatacgaagc aggtatttgg ttcggacgct ttttcacgcc acgttcagaa caggatggcg
     3901 acatacagcc gcctgcaaca acctgacact atgccgtccg aacctccgcc tcataccgca
     3961 acagattaag gaataccttt gaataccctc tatttaggtt caaacagccc gcgccgaatg
     4021 gaaatcctga cacagttggg ctatcaggtc gtcaagctgc ctgccaacat cgacgaaacg
     4081 gtcagacaga acgaagaccc tgcccgttac gttcaaagga tggcagaaga aaaaaaccga
     4141 accgccctga ccctcttttg cgaaaccaac ggcacaatgc ccgatttccc cctgattacc
     4201 gccgacacct gcgtcgtttc agacggcatc atattaggca aaccccactc ccaagccgaa
     4261 gcaatcgaat ttttaaaccg attgtccggc aaacaacata ccgtcctgac tgccgtctgc
     4321 attcattatc gcggcaatgc ggaaaaccgc gtccaaacca accgcgttgt ttttaagccc
     4381 ctgagttcgg aagaaatttc cgcctatgtg caaagcggcg aaccgatgga caaagccggt
     4441 gcctacgccg tacaaggcat aggcggcatc tttatccaat ctatcgaagg cagcttcagc
     4501 ggcattatgg gactgcccgt ttatgaaacc gtttcgatgt tgcaggattt gggataccgc
     4561 tcccccttgt ccgcccttaa accgtaaagt ccgccgtgaa cagacaaacc gcttacctcc
     4621 ttacctcttt cagcctgatc gcactgataa tcctgtccct ttcctgggaa ctgtggattg
     4681 caccgttgcg cccgggcggc tcgtggctcg cgctcaaagc cctccccctc tgtctgccgc
     4741 tttcaggtat cttgaaaaag aaaatctata cctaccaata cagctccatg ctggttctga
     4801 tttactttgc cgaagccgtc atgcgcctgt tcgacgccta tcccgcagaa cagatttgcg
     4861 ccgcgctttc cgcagtattc agcatcatct tcttcatatc ctgcctgtcg ttcgtcaaac
     4921 aatacaagga aacaaacaat gcccgctgaa acgaccgtat ccggcgcgcg ccccgccgcc
     4981 aaactgccga tttacatcct gccctgcttc ctttggatag gcatcatccc ctttaccttc
     5041 gcgctcaggc tgcaaccgtc gcccgacttt taccacgatg ccgccgccgc agccggcctg
     5101 attgtcctgt tgttccttac ggcaggaaaa aagctgtttg atgtcaaaat cccacccatc
     5161 agcttccttc tgtttgcaat ggcggcgttt tggtatcttc aggcacgcct gatgaacctg
     5221 atttaccccg gtatgaacga catcgtctct tggattttca tcttactcgc cgtcagcgcg
     5281 tgggcctgcc ggagcttggt cgcacactac ggacaagaac gcatcgtgac cctgtttgcc
     5341 tggtccctgc ttatcggctc cctgcttcaa tcctgtatcg tcgtcatcca gtttgccggc
     5401 tgggaagaca cccctctgtt tcaaaacatc atcgtttaca gcgggcaagg cgtaatcgga
     5461 cacatcgggc agcgcaacaa cctcggacac tacctcatgt ggggcatact cgcctccgcc
     5521 tacctcaacg gacaacgaaa aatccccgcc gccctcggcg taatctgcct gattatgcag
     5581 accgccgttt taggtttggt caactcgcgc accatcttga cctacatagc cgccatcgcc
     5641 ctcatccttc ccttctggta tttccgttcg gacaaatcca acaggcggac gatgctcggc
     5701 atagccgcag ccgtactcct aaccgcgctg ttccaatttt ccatgaacac cattctggaa
     5761 acctttaccg gcatccgcta cgaaactgcc gtcgaacgcg tcgccaacgg cggtttcaca
     5821 gacttgccgc gccaaatcga atggaataaa gcccttgccg ccttccagtc cgccccgata
     5881 ttcgggcacg gctggaacag ttttgcccaa caaaccttcc tcatcaatgc cgaacagcac
     5941 aacatatacg acaacctcct cagcaacttg ttcacccatt cccacaacat cgtcctccaa
     6001 ctccttgcag agatgggaat cagcggcacg cttctagttg ccgcaaccct gctgacgggc
     6061 attgccgggc tgctgaaacg ccccctgacc cccgcatcgc ttttcctgat ctgcacgctt
     6121 gccgtcagta tgtgccacag tatgctcgaa tatcctttgt ggtatgtcta tttcctcatc
     6181 cctttcggac tgatgctctt cctgtccccc gcagaggctt cagacggcat cgccttcaaa
     6241 aaagccgcca atctcggcat actgaccgcc tccgccgcca tattcgcagg attgttgcac
     6301 ttggactgga catacacccg gctggttaac gccttttccc ccgcccctga cgacagtgcc
     6361 aaaaccctca accggaaaat caacgagttg cgctatattt ccgcaaacag tccgatgctg
     6421 tccttttatg ccgacttctc cctcgtaaac ttcgccctgc cggaataccc cgaaacccag
     6481 acttgggcgg aagaagcaac cctcaaatca ctaaaatacc gcccccactc cgccacctac
     6541 cgcatcgccc tctacctgat gcggcaaggc aaagttgcag aagcaaaaca atggatgcgg
     6601 gcgacacagt cctattaccc ctacctgatg ccccgataca ccgacgaaat ccgcaaactg
     6661 cccgtatggg caccgctgct acccgaactg ctcaaagact gcaaagcctt cgccgccgcg
     6721 cccggtcatc cggaagcaaa accctgcaaa tgacccgcgc cggcggatac ggataccgcc
     6781 cgaaatgtaa agctccatgc aagacattgc aaaaaacagc aaaccggtag ggaaatacgc
     6841 tatcaaaaaa cattgcagcc gtgttaagat aaaccgtcaa acaatctttt cacgccccgc
     6901 ccgaaacagg gtcggggcat acccttacga aaaggaaaca ccatgagccg cgtattactc
     6961 gtagatgacg atgccctgct gaccgaactg ctgaccgaat acctgagcgc cgaaggtctg
     7021 aacgtccgca gcgttcccga cggggaagca ggcgtacagg aaatcctgag cgggcagtac
     7081 gatgtagtcg tattggattc catgatgccc aaaatgaacg gcttggatgt cttgaaaaac
     7141 gtacgcgccc gaagcaccgt ccccatcatc atgctgaccg ccaaaggcga cgacatcgac
     7201 cgaatcatcg gcttggaaat gggcgcggac gactatgtcc ccaaaccctg cacaccacgc
     7261 gaactcttgg cacgcatcaa tgccatcctg cgccgcgcac aacacagcgg cgaacagaac
     7321 aacgcaccca acagcatctc cgtcagcgat gtcgtcctgt accccgccaa acgccaggca
     7381 tccgtcaaag acatgccgct cgaactgacc agcaccgaat tcaacctgct cgaagtcctg
     7441 atgcgccatg ccggacaggt agtcagcaaa gaaaccctgt ccgtcgaagc actcgaccgc
     7501 aagctggcaa aattcgaccg cagtatcgac gtacacatct ccagcatccg ccacaagttg
     7561 ggcgatgcct ctctgattca aaccgtacgc ggcttgggct acctgtttgt caaaaactga
     7621 agcaacgggc aaatgaaact gttccaacgc atcttcgcca cattttgcgc agttatcgtc
     7681 tgtgcaatct ttgtggcgag tttttctttt tggctggtgc agaacaccct tgccgaaaac
     7741 cagttcaacc aacgccgcac catcgaaacc actttgatgg gcagcatcat ttccgcattc
     7801 cgggcacgcg gggacgcggg cgcgcgcgaa atcctgacgg aatggaaaga cagccccgtc
     7861 tcatcgggcg tgtacgttat acagggcgac gagaaaaaag atatcctgaa ccggtatatc
     7921 gacagctaca ccatcgaacg cgcccggctt ttcgccgccg gacacccgca ttccaacctc
     7981 gtccatatcg aatacgaccg cttcggcgaa gaatacctgt tcttcaccaa agactgggac
     8041 aaactccaag cccgccgcct gcccagcccc ctgttgatcc ccggtctgcc gctcgccccg
     8101 atttggcacg aactcatcat attgtccttc atcatcgtcg tcggactgct gatggcgtac
     8161 atcctcgccg gcaatatcgc caaacccatc agaatcttag gcaacggcat ggacagggtg
     8221 gcaaacggag aacttgaaac ccgtatctcc caacaggtcg acgaccgcga cgacgaattg
     8281 tcccatcttg ccatccaatt cgacaaaatg gtggaaaaac ttgaaaaact cgttgccaaa
     8341 gaacgtcacc tgctccatca cgtctcccat gaaatgcgtt ctccccttgc gcgcatgcag
     8401 gcaattgtcg gactgattca ggcgcatccc caaaaacagg agcaatatct caaacggctg
     8461 gaaggcgaac tgacccgcat ggatacgctg gccggggaac tgttaaccct gtcccgtctc
     8521 gaaacttcca atatggcttt ggaaaaagaa agcctgaaac tcctgccctt cctgggcaac
     8581 ctggtagaag acaatcaaag cattgcccag aaaaacggac aaacggttac cctgtccgtc
     8641 gacggaaaaa tccccgaaaa cacaaccatc cttgccaacg aaagctacct gtaccgcgcc
     8701 ttcgacaacg tcatccgcaa cgccgtcaac tacagtcccg aaggcagcac catcctgatc
     8761 aacatcggac aagaccacaa acactggata atcgacgtta ccgacaacgg ccccggcgtg
     8821 gacgaaatgc agctcccgca catcttcacc gctttctacc gtgcagactc cagtgcgaac
     8881 aaacccggaa caggactggg gcttgcattg acccaacata ttattgaaca gcactgcggc
     8941 aaaatcatcg ccgaaaacat caaaccgaac ggtctgcgga tgcgctttat cctgcccaag
     9001 aaaaaaaccg gttccaaaac agaaaaaagt gcgaactgac cataataccg tctgaaccgg
     9061 cttcagacgg cattgcacaa acagttactc caaaacaaac acacagcggg tgcatctcca
     9121 acaatcacgc acataccgtc cgcaaaggaa tatatcatgt cggcacaaac cgatccgggc
     9181 tactttttca tgcccaacca cattatcctg ataggcgcga gcgaacgtcc gtacagcctg
     9241 ggcgaacgcg tactcagcaa cctgctgagt acgccctttc aaggaaaaat cacccccgta
     9301 aacccgcgcc accacaccat agccgggctt cccgcctaca ccagcctcaa caaaatcccc
     9361 ggcaatgcag acctgattat tgccgttacc ctacccgaca gttacgacac cctcttcaaa
     9421 acctgccgca aaaagcagct ccgacacatc atcctcatac aggactggga cagcctgtct
     9481 gccgcagaac tgcacaccgc cgaaactgcc atccgcaaac accacggcaa cggactcaac
     9541 atcaccgcct gcaccaccgc aggcatccaa ctgccctcac tcggactcaa catcagtacc
     9601 caagacggat acgccgcagg ccataccgcc atactgaccg gcaatgccgc cgtcagccgc
     9661 caaatcgaca acatcctgaa caaactccgt caaggcacat cccgccacat cagcctgcat
     9721 cccggcatca gccccatcac ttcctcagac tggctcaacc gcttcggcca cagcctgcac
     9781 accaaaaccg ccgtcctaca ctacaaccct gaagaggatc agcgcaaact gttcagcgca
     9841 atccgccaat ttacccgcca tacgccgctg attctccaca tcacctgccg cacgacagaa
     9901 accgaccgtg ccgtactgca ctgcctcgcc cgacactgca acttcctcat cagtttcaac
     9961 gccgacgacc tcgaagccgc actgcgcgcc caactgtccg accttcctcc cctgtcccga
    10021 ctcgacatcc tgtccgacac gcctgccgaa tggctgaacg cgcacgcgcc aaaaaccctc
    10081 gccctccact ttcccaacct tccccatcac atccgcaacg gacacctgac cggcacaccc
    10141 acaccctcaa tctgccacga catcgcctca cgtcagcttg cccgccccga cacccaagcc
    10201 gtcctaacca tcctcagtcc ctccggacac gaggattaca aaaaaacagc acgcgccctt
    10261 atccgcctgt ccgaacagac cgccaaaccc ctgctcgtca gcagcccctt ttcagacggc
    10321 ataacacatt tcgacacccc cactcaggca atccgcaccc tttcctaccg caacaccgcc
    10381 gccgccctga aacaggcaca gctcgacatt gcaccgccgc agccatgccg tctgaaaaca
    10441 ccgcaacccc aaaacatcaa aaaagccctt gcagcggcaa atccctccct gctcgccgaa
    10501 gccctgcacc tcccccccta ccggcacact acccataacg ccgtccaatt ccaattcggc
    10561 agccaccccc tctatggcga catcctgacc gcatgctgca acggacaaac cactgccgta
    10621 ctcccgccgt ttaccacgct cgacagccgc caccttgccc gctttgccga actcgacggc
    10681 acacaaaccc tcgaccagtt cctgcacaca ctgaccgtca ttcccgaata ccgccaacac
    10741 attctcggca tcaccctcaa cctcaacggc ggacaataca gcagcgattt catcttaaag
    10801 acacccgaaa cacacgacac gcccaaacgc aagaacacag gcaaagccgc ccaaaccctc
    10861 gaacatgccg ccgcaaaaat gcagagtgcc gccgcatacc tgaaacacaa aaacccgaca
    10921 gccgccgaat ttctccgcca cacaagcgaa gccgccgcag aactgctcgg cagcaaaacc
    10981 gaaaccggag cagccgtacc caacgtactt gccccctatc ccgcagcaca cctcaaaaca
    11041 ctgtccctaa aaaacaacac gaccgttacc attacccccc ttttgcccga agacgcagaa
    11101 gccaaacagc agttcgtccg cagcctcagc cccgaagcac ggtacacacg cttcatgacc
    11161 cacaccaacg aactgcccgc agccacgttg gcacgcctgt gcaaccccga ttaccactgt
    11221 gaagccgcat ggacggcaag ggatgccgac agcaacatcg tcgccgtcgt ccgccacagc
    11281 cgcctgaacc gcaacgaatg cgaattcggc atcacactgg cggaacatat gcgcggcagc
    11341 ggactggcac agaaaatgat ggaactcatc atccaaaccg ccgcacagca aggctaccgg
    11401 actatgagtg ccgacattct caaaaccaat actcccatga tcaaacttgc tgaaaaatca
    11461 ggatttaccc tcaaggaatc ggacaccgaa aaaaacctgt accgcgcata tctgaacctt
    11521 gcggcagaca aaacaacaga aaaaacaaat aaaaacttgc acaccgacca caaaataacc
    11581 taaaatcggc agtttccata tatccgattt tctcaaaagg actcaaaatg gtagttatcc
    11641 gtttggcacg cggcggctcg aaacaccgcc ccttctacaa cgtcatcgtt actgactcac
    11701 gcagccgccg cgacggccgc ttcatcgaac gcgtaggctt ctacaacccc gtagccaacg
    11761 aaaaacaaga gcgcgtccgc ctcaatgcag accgcctgaa ccactggatt gcacaaggcg
    11821 cgcaagtcag cgactccgtt gcaaaactga ttaaagaaca aaaagccgcc taatccgcgt
    11881 ttgccgccat gacagacact caaaaccggg tagccatggg ctacatcaaa ggcgtattcg
    11941 gcataaaagg ctggttgaaa attgccgcca acaccgaata ttccgacagc cttttggact
    12001 accccgagtg gcatttggtc aaggacggca aaaccatcag cgttaccctt gaagccggaa
    12061 aagtcgtcaa cagcgaactc caagtcaaat tcgaaggcat aaacgaccgc gacttggcat
    12121 tctcattgcg cggttacacc atcgaaatac cccgtgaagc attcgccccg acagaagaag
    12181 acgaatacta ctggacagac ttggtcggca tgaccgtcgt caacaaagac cataccgttt
    12241 taggcaaggt aagcaacctg atggaaaccg gcgcaaacga cgtattgatg attgacggag
    12301 aacacgggca gattctgatt ccgttcgttt cccaatatat cgaaaccgtc gataccggca
    12361 gcaagaccat tactgccgac tggggtttgg actactgatg cttatccagg cagttaccat
    12421 tttccccgaa atgttcgaca gcattacccg ctacggcgta acgggacgcg cgaacagaca
    12481 gggaatctgg cagtttgaag cagtcaatcc ccgaaagttt gccgacaaca gattgggcta
    12541 catcgacgac cgcccgttcg gcggcggccc gggaatgatt atgatggctc cgccgcttca
    12601 tgcggcaata gaacacgcca aaacacaatc ctcccaagct gcaaaagtca tctacctcag
    12661 cccccaaggg aaaccgctga cacaccaaaa agcggtagaa ctggcagaac ttccgcatct
    12721 gattctgctg tgcggacggt atgagggcat agacgaaagg cttctgcaaa gcagcgtcga
    12781 tgaagaaatc agcatcggag acttcgttgt ttccggcgga gagcttcccg ccatgatgct
    12841 gatggatgcg gtattgaggc tcgtacccgg cgtattgggc gatatgcagt ctgccgaaca
    12901 ggattcgttc tcaagcggca ttttggactg cccccactac accaaaccct tagaatttca
    12961 aggtatggct gttccggaag tattgcgttc cggcaatcat ggcttgatag cggaatggcg
    13021 gttggaacaa tcgctgcgcc gcaccttgga gcgcagaccc gatcttttgg aaaagcgcgt
    13081 tttaatccca aaggaatccc gcctcttaga aaccatccgg caagagcaac gggaaatcca
    13141 atcataattt aggaaaaaaa caatgaacct gattcaacag ctcgagcaag aagaaattgc
    13201 ccgcctgaac aaagaaatcc ccgaattcgc accgggcgac accgtagtcg tatccgtacg
    13261 cgtcgtggaa ggtacccgca gccgtctgca agcctacgaa ggcgttgtca tttcacgccg
    13321 caaccgtggt ctgaacagca acttcatcgt ccgtaaaatt tccagcggcg aaggtgtgga
    13381 acgtactttc caactgtact cccctaccgt tgagaaaatc gaagtcaaac gccgtggcga
    13441 tgtccgccgt gccaaacttt actatctgcg cggtctgacc ggcaaagctg cacgcattaa
    13501 agaaaaattg cctgcacgca aaggttaata agcgatttcc cccaatgccg tctgaacctt
    13561 cagacggcat ttcttattgc tgcgatgccg gcaagtcaac gatatgcctg cccctcatcc
    13621 accttgatta acaatcactc ccgcctattc aagcataatt tacagaccaa acgttataca
    13681 gtatcatatc agccatataa cgataaacgc tttaccgcct tccctttcaa aaccgcaaat
    13741 catcatgaca ccttcccttt tactatcagg attgactttc cgcctcatcc ttgccctgat
    13801 tgccgtatcc cttttatggg gcgtttactt ttgggcagta tccgcatgag catcattgtc
    13861 gaaaacctga ccgtcagcta ccgccgccga cctgccgtgc accatgtgga cattactttt
    13921 gaagaacata gtatgtgggc ggttttcggt cccaacggcg cagggaaatc cacctttctc
    13981 aaatccttaa tgggattgca gcctatcgat acgggcagca tccggctgga cggattgacc
    14041 cgtcagaaca ttgcctacct tccccagcag tccgacatcg accgctcgca gcctatgacc
    14101 gttttcgact tggcggcaat ggggctatgg tatgaaatcg gttttttcag aggaataaat
    14161 gccgttcaaa aacaacgcgt tcacgaatct ttggaacgcg tcgggatgcg gcagtttgcc
    14221 ggccgccaaa tcgcccacct ctcaaacgga caattccagc gtgtcctttt tgcccgaatg
    14281 ctggttcaaa acgccaaatt cctacttcta gacgaacctt tcaacgctgt tgatgcacgg
    14341 acgacctacg aacttctcga cgtattgcag aaatgccatt gcggcggaca cgccatcatc
    14401 gccgtactgc acgattacga acaagtccgt gcctactttc ccaataccct gctgctcgcc
    14461 cgcgaaaaaa ttgcggcagg cgcaaccgag accattctga cagaacccta cctcgcccaa
    14521 gccaacgcca aaatgcagca acaggaaagc cccgagtggt gcgcctcata aatgccgtct
    14581 gaaaccatgt ccccgtacca aacactatga acccctacga cctgcttatc acaccctttg
    14641 cagaattcga ctttatgcgc tacgccctcg tatccgtctt ctgcctgtcc ctcagtgccg
    14701 cacccgtcgg cgtattcctc gtcatgcgcc gtatgagcct gataggcgac gcattgagcc
    14761 acgctgtcct gcccggtgcc gccgtcggct acatgtttgc cggcttgagc ctgcccgcca
    14821 tgggtttggg cggcgtagcc gcaggcatgc tgatggcact gcttgccgga cttgttagcc
    14881 gcttcaccac cctgaaagaa gatgccaact ttgccgcctt ttatctcagc agcctcgcca
    14941 taggcgtagt cctcgtcagc aaaaacggca gcagcgtcga tctgctgcat ctgcttttcg
    15001 gctctgtact tgccgtcgat attcctgccc tgcagctcat cgccgccgta tccaccctca
    15061 cactgcttac ccttgccgtc atctaccgcc cgctcgtact cgaaagcatc gaccccctgt
    15121 ttctcaaatc tgtcggcggc aaaggcgggc tttggcacgt cctctttctc gtcctggtcg
    15181 tcatgaacct cgtatccggc tttcaagccc tcggcacact catgtccgtc ggactcatga
    15241 tgctgccagc cattaccgcc cgcctgtggg cgaagcacat gggcgcactc atcctcctat
    15301 ccgttctgac agccctgctg tgcggcttga gcgggctgct catttcctac cacatcgaaa
    15361 tcccttccgg ccccgccatc atcctctgtt gcagcgtcct ttatctcttt tccgtcatac
    15421 tcggcaaaga aggcggcatt ctgaccaaat ggctcaaaaa ccaccgccac cacaccacct
    15481 gaccccgcaa gccgcttgaa caaacaggcg gcttgtttta ccataacaga tgttacgtta
    15541 tatcacagga gaacagttat gaaacacccc aaactcaccc ttattgccgc attgctaacc
    15601 accgccgcaa ctgccgcccc cctgcccgtc gtaaccagtt tcagcatttt aggcgacgta
    15661 gccaaacaaa tcggcggaga gcgcgtatcc atacaaagtt tggtcggagc caaccaagat
    15721 acgcacgcct atcatatgac cagtggcgac attaaaaaaa tccgcagtgc aaaactcgtc
    15781 ctgctcaacg gcttaggact tgaagctgcc gatgtacaac gtgccgtcaa acagagcaaa
    15841 gtatcctatg ccgaagcgac caaaggcatc caacccctca aagccgaaga agaaggcgga
    15901 caccatcacg accacgatca tgaccacgaa ggacaccacc atgaccacgg cgaatatgac
    15961 ccccacgtct ggaacgaccc cgtccttatg tccgcctatg cccaaaacgt cgccgaagcc
    16021 ctgataaagg ccgaccccga aggcaaagtt tattatcaac aacgtttggg caactaccaa
    16081 atgcagctca aaaaactgca cagcgacgca caagccgcat ttaacgccgt ccctgccgcc
    16141 aaacgcaaag tcctgaccgg gcacgatgcc ttttcctaca tgggcaaacg ttaccatatc
    16201 gaattcatcg ccccgcaagg tgtgagcagc gaagccgagc cttcagccaa acaagtcgcc
    16261 gccatcatcc gacaaatcaa acgcgaaggc atcaaagccg tctttaccga aaacatcaag
    16321 gacacccgta tggttgaccg tatcgccaaa gaaaccagtg tcaacgtcag cggcaaactg
    16381 tattccgacg cactcggcaa cgcgcccgca gacacctaca tcggaatgta ccgccacaac
    16441 atcaaagcct tgaccaacgc gatgaagcaa taaaaccgtt tgattggttt gaatttgaaa
    16501 aggcaaaagg ccgtctga
//
LOCUS       DAWKOX010000028        16173 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.028, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000028 DAWKOX010000000
VERSION     DAWKOX010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16173
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.028"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(45..1226)
                     /gene="odhB"
                     /locus_tag="WJK78_000655"
     CDS             complement(45..1226)
                     /gene="odhB"
                     /locus_tag="WJK78_000655"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ7597610.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAESGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLD
                     L"
     gene            complement(1326..4154)
                     /locus_tag="WJK78_000656"
     CDS             complement(1326..4154)
                     /locus_tag="WJK78_000656"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ7597611.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDTVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVVGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(4359..5642)
                     /gene="gltA"
                     /locus_tag="WJK78_000657"
     CDS             complement(4359..5642)
                     /gene="gltA"
                     /locus_tag="WJK78_000657"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ7597612.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(5754..6002)
                     /locus_tag="WJK78_000658"
     CDS             complement(5754..6002)
                     /locus_tag="WJK78_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ7597613.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(6006..6713)
                     /locus_tag="WJK78_000659"
     CDS             complement(6006..6713)
                     /locus_tag="WJK78_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ7597614.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(6834..8597)
                     /gene="sdhA"
                     /locus_tag="WJK78_000660"
     CDS             complement(6834..8597)
                     /gene="sdhA"
                     /locus_tag="WJK78_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ7597615.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(8600..8941)
                     /gene="sdhD"
                     /locus_tag="WJK78_000661"
     CDS             complement(8600..8941)
                     /gene="sdhD"
                     /locus_tag="WJK78_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ7597616.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            complement(8935..9312)
                     /gene="sdhC"
                     /locus_tag="WJK78_000662"
     CDS             complement(8935..9312)
                     /gene="sdhC"
                     /locus_tag="WJK78_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ7597617.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(9591..10994)
                     /locus_tag="WJK78_000663"
     CDS             complement(9591..10994)
                     /locus_tag="WJK78_000663"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ7597618.1"
                     /translation="MKKIQADVVVLGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDSFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAS
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(11243..11980)
                     /locus_tag="WJK78_000664"
     CDS             complement(11243..11980)
                     /locus_tag="WJK78_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ7597619.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LQFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(12083..12247)
                     /locus_tag="WJK78_000665"
     CDS             complement(12083..12247)
                     /locus_tag="WJK78_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597620.1"
                     /translation="MNKYRLKAFQTVFCPDLRRKGAVAGKSFHCSLFFSHSALYVGNR
                     QIGVVFDSFK"
     gene            complement(12259..14535)
                     /gene="metE"
                     /locus_tag="WJK78_000666"
     CDS             complement(12259..14535)
                     /gene="metE"
                     /locus_tag="WJK78_000666"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ7597621.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQVAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTGFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLSKVNAKILLSTYFGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKNQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARSAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTRKLRAELAK"
     gene            complement(14673..15551)
                     /gene="metF"
                     /locus_tag="WJK78_000667"
     CDS             complement(14673..15551)
                     /gene="metF"
                     /locus_tag="WJK78_000667"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ7597622.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15751..16026
                     /locus_tag="WJK78_000668"
     CDS             15751..16026
                     /locus_tag="WJK78_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ7597623.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            16026..16151
                     /gene="ykgO"
                     /locus_tag="WJK78_000669"
     CDS             16026..16151
                     /gene="ykgO"
                     /locus_tag="WJK78_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ7597624.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
BASE COUNT         3980 a         4090 c         4022 g         4081 t
ORIGIN      
        1 tcagacggcc ttttcattaa caaataaaag gccgtctgaa acgattacag atccaacaac
       61 aggcgggctg ggtcttccaa cgcgtcttta atggctacca aggtcaatac agcttcgcgg
      121 ccgtcaatga tacggtggtc gtaagacaga gccagataca tcattggacg gacaacaact
      181 tggccgtttt caaccacagc gcgctcttta gtggcgtgca tacccaaaat cgcagattga
      241 ggcggattga tgatcggggt ggacatcata gaaccgaaag taccgccgtt ggtaatactg
      301 aatgtaccgc cggtcagatc ttcgatagcg attttgccgt ctttggcttt tttcgcgtaa
      361 tcaacaattg cttgttcgat gtcggcaatg ctcatttggt cggcatcgcg caggattggc
      421 acaaccaaac cgcgtgggct gccaatcgcg ataccgatgt cgaagtagcc gtggtacaca
      481 atgtctttgc cgtcaacaga agcattcaca accgggtatt ttttcagggc tgcaacagcg
      541 gctttaacga agaaggacat aaagcccagt ttcacgccgt gttctttctc gaatttttct
      601 ttgtacttcg cacgcaagtc catgattggt ttcatgttga cttcgttgaa tgtagtcaga
      661 atggcgtttt cttgttgaga agccaagagg cgttctgcaa cacgggcacg caggcggctc
      721 atcggtacgc gttcttcagg acgtgcgccg gcaggaagtg caacggcagg agcagcggct
      781 gcggcaggtt tggctgcggc attttgtacg tcttctttca atacgcgacc gtcacggccg
      841 gaaccttgca atgcgttcac gtcaacaccg ctctctgcag ccagtttggc ggcggcaggc
      901 atagcggcgt tgttttgtgc agcagcagga gcggcggccg gggcagcttc ggcaggagcg
      961 gcggcaggtg cttcagcagc ggcagtagca gcggtatcga tacgtgccaa aacttggtcg
     1021 gcaacaacgg tttcaccgtc ttgcgctacg atttcaacca atacgccggc ttgtggagaa
     1081 ggtacttcca aaaccacttt gtccgtttcg atatcgatca ggatttcgtc acgggcaact
     1141 gcttcgccaa cttttttctt ccattccaag agcgtgcctt cagatacgct ttcagacagc
     1201 ataggtactt ttacatcaat aatcattttg tgtctccaat ggccctttca gacggcctgt
     1261 tgtgtgtttt tcattctgca tatgggcatt ccgcctgagc agcctcagac ggaatgctgc
     1321 ttggtttaca acgccaaagc gtcttcaacc aattgtttca attgagcaat gtgtttgctt
     1381 gagtagccca ctgcaggcga tgcgctgctt ggacgaccgg cataagacag tttttgctct
     1441 tcgctgataa cgtcttcgat gcggtggcgg atttggtaga acgcgccttg gtttttcggc
     1501 tcttcttgcg cccaaaccac agattttgcg ttcggatatt tcgccagttc ggctttaacc
     1561 tcatcgtatg ggaacggata cagctgctca acgcggacaa tcgcaacatc atcttccagt
     1621 ttacgttcgg ctcgaccggc ttccaagtca tagtaaacct gaccggcaca caataccacg
     1681 cgtttcacgc tgtcgttgct tgcgcgttcg gcggtatcgc cgacaaccgg acggaaagtc
     1741 gaaccttcgg tgaagttttc cagcgggctc attgcccctt tgaatcgcaa caggcgtttg
     1801 gacatgaaaa ttaccagcgg tttgcggtat gaacctaaga cttgacgttg caagaggtgg
     1861 aacatttgcg acgcttcaga tggcatgatg acttgcatat tgttctcaga acacagttgc
     1921 aaccagcgtt ctacgcgtgc agaagagtgc tcagggcctt gaccgtcgta accgtgcggc
     1981 aggatggtgg tcagaccgca caagcgaccc catttggttt cgcctgaaga caggaattgg
     2041 tcaatagtca cttgcgcgcc gttggcgaag tcaccgaatt gagcttccca aatggtgagc
     2101 ttgtcaggag cggagcaggc aaagccgtac tcgaacgcca tcacggcctc ttcgttcaag
     2161 atggagtcga taaccaggaa ctcgcccatt ccttcgccca tatggcgcag gggaacataa
     2221 gtaccgtcgt cccatttttc gcgtttttga tcgtgcaata cggcgtggcg gtgcgagaac
     2281 gtaccgcggc cggagtcctc accggagata cgcacgccat gacctttggt tacgaggctg
     2341 gcgtatgcca aggtttcggc cataccccaa tctatggcct gtttgccgga tgccatggct
     2401 ttacgcgctt caatcacacg ttttgcagtc ggatgcaggg caaagccttc cggtacggcg
     2461 gtaaacttct cagtgagacg ctcaatatct gcggcaggca aaccggtttc gatgtgttcg
     2521 cgccaatctt tgccttggta tttgctccag tcgatttgcg tgcgttgaaa gttgctcaac
     2581 gttgtttgct cgacgtgttc gcctttgtcc aaagcatcac ggtaggcttg gatgtaaccg
     2641 tctgcctcgg cttgggttac cacgccttcg gcaatcagtt gctcggtgta caaagcacgc
     2701 gcaccggggt gttgcgatac ttttttgtac atcatcggtt gggtcaaggt cggatcatcg
     2761 ccctcgttgt gaccccattt acggtagcag acaacgtcaa tcacgatgtc tttatggaat
     2821 tttttgcggt aatccaaagc ggcttggatg gcaaagcaaa cacgctcagg atcatcgccg
     2881 ttcacatgga taaccggagc ggaaaccatt tttgcgatat cggtacagtg tacggttgaa
     2941 cgggtatcgc ggatatcgga agtggtaaag ccgatttgat tgttgatgac gatatgaacc
     3001 gtaccgccgg tggtataacc gcgcgtttta gacaggttga atgtcgcttg gttgacaccc
     3061 aaaccgataa atgcggagtc gccgtgaatc aatacgggca agactttatc gcggccgttt
     3121 tcgcccaaac gtttttgctt ggcgcgtgca gaaccttcca ctaccggatt gacgatttcc
     3181 aagtgggacg ggttgaacgc caaagaaaca tgcatcgggc cgtgcggggt agcaatatcg
     3241 gagctgaagc ccatatggta tttcacgtcg ccgctgggca gtttgatttc ggcacgacct
     3301 tcaaattcgg caaacaaatc gccgggtttt ttgcccaaaa tgttcaccaa aacattcaga
     3361 cggccacggt gcgccatacc gatgatgact tcttccacgc cgtctttacc ggcgttttga
     3421 atcaggtagt tcaaaccggc aatcgcgctt tcgccgcctt cgacaccgaa acgtttctga
     3481 ccgacatatt tggtatgcag ataacgttcc aaagtctcgg cagcagtcat ctctttcaag
     3541 atacggcgtt tttgatcggc attgtaatgc ggtgtggaca atacgctttc aaaataattg
     3601 cgtacccagc ggcgctcttc ggtattggga atatagatat attccaatgc gatgtggccg
     3661 cagtaggttt gtttgaggtt gctgatgatt tgggacaaag gcagtttgcc gcgattggca
     3721 aaatcgccct cgcccatatt gaattgaagc gccatatcgg catcagacag accgtggaat
     3781 ttcggatcga gggcttcaat atcgcgcggg gggatacgtt tgagcggatc aagttgggct
     3841 gcacccacgc cttggatacg ataggcagaa atcagccgta aaacgctgac ttgctttttc
     3901 agcattgcct catccgcacc gcccgcaacg gcagatgcaa ttttcttttt cgccaaagta
     3961 acaaatgatt cgcgaatcgg tgtgtgtgcg acatcgacag caaccgtccc cggctgtttg
     4021 ctcaaatcgg tgaaatactg cttccatttt tcatcaaccg tatcggggtt ttccaaaaaa
     4081 gcctcgtaca attcctcaat gtagggtgcg ttcgaaccga acaggtaaga gaaattgagt
     4141 ttttcgtcca tcatggcgtg cgctcttttc tttaaaatat aaacaaaggg tagaagtccg
     4201 cgtcctgacg gctaaactga tgccgtctga aaagacattt tattctaccc tattttaaac
     4261 cggattgctt gtcttgattt catccgacta caatcagacg gattcgggaa acaatccggt
     4321 tctctgatat tgcctgtttg acaatatatt aatgtatgtt acctctcgcc tggcggcaca
     4381 taatcgcggc gttccgaacc ggtataaagc tggcgcgggc ggccgatttt cagcgaagga
     4441 tcgctaatca tctcgtgcca gtgcgaaatc cagcccacgc tgcgcgacag ggcgaagatg
     4501 acggtaaaca tttcggtcgg gatgcccagc gcggacagga cgatgccgga atagaaatcg
     4561 acgtttggat acagtttgcg ttcgataaag aacgggtctt tcagcgcaat ctgttccaat
     4621 tccatcgcca gtttgaattt cggactgtct tccaagccca attccttcaa aacttcatag
     4681 caggtttcgc gcataatgct ggcacgcgga tccatattgc ggtacacgcg gtgaccgaag
     4741 cccatcagac ggtatttgcg ttgtttcaca ccttccatgt atgcggcaac attagacaca
     4801 tcgccgattt cgtccaacat tttcaacacg gcttcgttcg caccgccgtg cgaagcaccc
     4861 cacaggcagg cgataccggc agcaatacag gcaaacggat tcgcacccga agagcctgcc
     4921 aaacggacgg ttgaagttga ggcgttttgc tcgtggtcgg catgcaaaat aaagatgcgg
     4981 tcgagcgcgc gtgccaaaac gggattgggt ttgtagtctt cacacggcgt ggcgaacatc
     5041 atatgaagga agttttcgga ataagaaaga ttattcttcg gataattgaa cggcagaccg
     5101 tttgaatagc ggtagcacat tgccgcaatg gtcgggattt tagaaatcag gcggtaaatc
     5161 gcgattttgc ggtgttcggg attgctaatg tccaagctgt cttggtagaa cgcagacagt
     5221 gcgccgacca cgccgaccat catcgccatc ggatgcgcgt cgcggcggaa gccccggaag
     5281 aaccaagtca gctgttcatg caccatcgtg tggcggcgga cggtattgtc aaattctgcc
     5341 ttttgctcgg gagtcggcag ttcgccgtaa atcaacaggt agcagacttc caaataatcg
     5401 gacttttcgg ccagctgctc gatggggtat ccgcgataat aaagcaagcc ttgatcgccg
     5461 tcgatgtaag taattttaga ctcacagctt gcggttgaaa caaatccggg gtcgaaggaa
     5521 aacaaacctg tattttttgt cagcccccga atgtcaacca catcgtgccc gatgctggct
     5581 tccaataccg gcagctccaa acctgcctga cccggtacgt tgagtttgat tgatttggac
     5641 atattattgc tcctttgcaa gttataaccc acgttactgc atccgcagca cgttctttgc
     5701 cttcagacgg cttttgcatt ttgaaatctg cctgcaggca gatttcagat gcctcatgcc
     5761 cgtctgattt tttcaagcat cgggataagg tgccctttgt ccgtttccga atgcccgtta
     5821 atcaaggcaa gcaattcttg atcttgaaat tcaaggattt cggaaaactc ggacagctct
     5881 ttatcgctca aatgctcgaa ttctttttcc ataaacctgc cgaagattaa atctaactcc
     5941 aacaatcccc ggcgggtttg aaaacggatt ttccgtttgg caatatcgtc aaaaaccatc
     6001 atttcttaaa cggcccgttt caacataatc tctttaatct taccgatggc tcgggtcgga
     6061 ttcaagtgtt tgggacatac gtctacgcag ttcataatgg tgtggcaacg gaacaaacgg
     6121 tatgggtcgt tcagattatc caaacgctca ttagtgatgg tatctcggct gtccgcaatg
     6181 aagcggtaag cattcagcaa accggacgga ccaacgaatt tatcagggtt ccaccaaaat
     6241 gacgggcagg cagtcgaaca gcaggcgcac aaaatacact cgtacaaacc gtccaactct
     6301 ttacgctctt cctgagtttg cagacgctct ttgtccgcat caatcggatt atcgttgaca
     6361 acataaggtt tgacggaatg gtattgtttg aagaactggg tcatatccac aatcaggtca
     6421 cggataacag gcagacctgg cagaggacga attttaaccg gctgtttcaa gccacgcaga
     6481 tcggtcaaac acgccaagcc gtttttgccg ttgatgttca taccgtcaga accgcaaatg
     6541 ccttcgcggc aggagcggcg gaaagacaag gtatcgtctt gtgctttcag gcgtaccaaa
     6601 gcatccaaaa gtttcacgtc ggtcggttcc aattccaact cgtaacgctg catataaggc
     6661 ttggcatcaa catccgggtt gtaacggtaa atttcaaaac tcattttttc catgagaagt
     6721 gttccttttc tcatcaactg cccaatgatt ttgtattata aattcaagca gttcaatgtg
     6781 ggtatggtta gatttcagac gagcttatga ggcgaaaacc gtctgaaaac gcatcaataa
     6841 acgcgcttgg ccggtttgat gtattccacg ctcaaaggct tggtatgtac cggtttgtaa
     6901 gacaaagtat tggtatctga atggtacagc gtatgtttca tccagttttc atcatcgcgc
     6961 tcaggatggt cgtctgaagc gtgcgcaccg cgtgattctt tacgtgcttc ggcagacacc
     7021 aaagtcgctt tcgccacttc aattaggtta tccaattcca aagcctcgat acgcgcggta
     7081 ttccacactt tgctcttgtc tttgatttcg gtacgtttca cacgctcggc aatcgccatg
     7141 acttctcgaa cgcctttgct cagaatctca tcagtacgga acacgccggc gtgcagttgt
     7201 acggagcgtt gcaattcgcg acgcaatgca tcaacgtttt cgccatcagt ttgattgtcc
     7261 aaacgctcga tacgttggcg ggtcagctcg cccgcatccg caggcaaagg tttccagtcg
     7321 ctttgctctt tgatgaattt aatcatgctg tcgccggcag ctttaccgaa taccaccaag
     7381 tccaacaggg agttggtacc caagcggttc gcaccgtgta cggaagcaca agcgcactca
     7441 cctgccgcat acagaccttt tacaggcact tcgtattcgt cgccttgagg aacgacaact
     7501 tcgccatggt agttggtcgg aataccgccc atcatatagt gggtagtcgg cacaacggga
     7561 atcgggtctt taatcggatc gataccggcg aactgaatgg aaatctcgcg gatgcccggc
     7621 agtttttcca taattttttc tgcgccgata tggtcgattt tcagtaagac atggtctttg
     7681 tttttaccgc agccgcgacc ttcgtagatt tccatcgcca tcgcgcggga aacaacgtcg
     7741 cgagaagcca agtcttttac ggtcggcgca tagcgttcca taaagcgttc gccgtcggca
     7801 ttcaacagaa taccgccctc gccgcgtacg ccttcggtaa tcaacacgcc cgcacctgcc
     7861 acgccggtcg ggtggaattg ccagaattcc atgtcttcca acgggatacc tgcacgcgcg
     7921 caaataccca aaccatcgcc ggtattcata taggcattgg tagaagaggc ataaatacgg
     7981 ccgccgccgc cggtagcaaa catcacagct ttagcgtgga aaatataaac ttcgccggtt
     8041 tccatttcca tggcggttac gccgacgaca tcgccgtttt catcacgaat caaatcttgt
     8101 gccgtccatt ccacaaagaa ttgcgtattg gcacggacgt tttgttggta caaagtatgc
     8161 agcatcgcat gacctgtacg gtcggcaacc gcacaggcgc gttctaccgc gcgtttaccg
     8221 tgttcggcag tatggccgcc gaaaggacgc tgataaattt taccgctttc cacacggtca
     8281 aaaggcatac ccatgtgttc caactcaatc accgcttcag gcgcagcgcg gcacataaac
     8341 tcaatcgcat cttggtcgcc cagccagtcg gaacctttca cggtatcgta catgtgccag
     8401 tcccaacggt cctcctgcac attacccaaa gaggcggaaa taccgccctg cgccgctacg
     8461 gtatgcgaac gggtcgggaa cactttagac aaaacggcac aattcagacc ggatttggat
     8521 aattggaggg ctgcgcgtaa acctgcacca ccaccgccga caatcacggc atcaaacttg
     8581 cgaacaggaa aacccatact tacccccaaa ttactttaat tgaatacacc aagcagccga
     8641 ccagccagac gatggtggca acctgcaaaa acaaacgcac gccgaagggt ttgatatagt
     8701 ccatccacaa atcgcggata cccacccaag cgtgcaagaa tacggcgatg aagctcactt
     8761 gggtaaatac ttttacccaa gtttgactaa aaaatgcctg ccatgccgaa tattctttag
     8821 gcagggaaaa tagaaccact aaaagtgcaa cggtataaat caacataata accgcagtcg
     8881 cacgttgcat cgcccaatcg cgcaaaccgt aatgggcacc ggtcaattta cgttctacca
     8941 taacaacgct cccaaaacga cagtcaaaac caatgcagaa gcaaatacgg ctttagcggt
     9001 attgcgcgca gtattcagct caaggccttt gtgcgcatcc aaaaataaaa agcggatacc
     9061 ggcgagagaa tggtgcagat aagcccacaa tacaccgatt aaaaccagct tgaccaaagg
     9121 atgggaaaca atggcacggt aagtttcaaa tgcagactct tgactcaggg taccggacag
     9181 gaaatacagc aggaaaggca gcataataaa cagcccgacc ccactgatgc ggtgaaggat
     9241 ggaaactatc ccgggtatcg gcagacggat gttcggcaaa tccagataaa caggacgcgg
     9301 tttggcagac atagtcaatt cctctgtagt tatatatcga ctcaaaaacc gtaaacccat
     9361 tgctacactg ggttacataa acgttaattt acctgtttta tcccattttg aacagtgtat
     9421 tttaaaaaca aactgataga ttttgacaaa cacgcgtgga aacagcagat taaaagaaag
     9481 atttttagtt ttgccgcccc cttcccgaca cggtatcagc atccgacccc atccccaaaa
     9541 acaaaatgcc gtctgaaaaa atttcagacg gcattgtttt gccatatcgg tcaggctttc
     9601 aatttcgcat cggcatcgcg caacgcggta cgcagacctt cctcgataac gggatggtag
     9661 aacggcatat ccagcatttg cggaacggtc atcttcattt gatgcgccca tgccaacaag
     9721 tgcgccaaat gttcggcggc agggcctacg atttccgcgc cgataaagcg gccggtggct
     9781 ttttcggcat acaggcgcat atggcctttg tttaccagca tcacgcggct gcggccttgg
     9841 tttttgaacg atacttcgcc gatgacaaat tcgtcggctt ggtattgcgc ggcaacctgc
     9901 gcgtatttca gaccgacaaa gccgatttgc ggactggtaa acaccacgcc gatggtgctg
     9961 cggcgcaaac cgccgccgat attcgggtag cggctcgcgt tatcgccggc aatcttgcct
    10021 tggtcggcag cttcatgcag cagaggcagt tggttggacg catcgcctgc gatgaagata
    10081 tgcggaatac tggtctgcat ggtcagcgga tcagcaacag gtacgccgcg cgcatctttt
    10141 tcgatattga tattttccaa accgatattg tcaacgttcg gacggcggcc cacggctgcc
    10201 agcatatatt cggcaacaaa tacgcctttt tcgccatcct gctcccaatg gacttctaca
    10261 ttgccgtctg catcgagctt gacctcggtt ttagcatcca aatgcagttt caattcttcg
    10321 ccgaacacgg ctttcgcctc gtctgaaacg acggggtcgg aaatgccgcc gatgattccg
    10381 cccaaaccga aaatttcaac tttcacgccc aaacggtgca atgcctgacc cagttccaaa
    10441 ccgataacac ccggcccgaa cacggcaacg cgcttaggca gcgtatccca tgagaaaacg
    10501 tcatcgttga taatcaaacg attgcccaaa gactgccatt gcggcaggat gacgggacgc
    10561 gaaccggtag caatcacgaa actttttgcc gtaatttgag tatgctcgtc gatttggacg
    10621 gtatgctcgt cgataaattt agccgaaccc atgatgcgct tgtcggcagg ccactcttcc
    10681 acatcggcaa cgacaaagcc gacaaaacgg tcacgctcgg atttaacgcg ctgcatgacc
    10741 tcttcaccgt tgacgacgat gctgtctttg tccaaatgca cgccgaacga gtcggtatgc
    10801 aatgcgtggt ggcgcgcttc tgcggcggca atcaagagtt tggaaggcat acaacccacg
    10861 cgcgcgcagg ttgtgccgaa cacattgttt tcaatcaggt aaacattatc cgaatgtaaa
    10921 cgggcattgc gaaacgcacc cataccggca gtaccgccgc cgagtacgac gacatccgct
    10981 tgaatttttt tcataatctt tgtccttccg ttttcgtctg aaacattgcc gacacagaac
    11041 atatcggttt cagacggcat ttaaatattt tcccaatcaa aaacatcatt cagataaata
    11101 aaaacaaaat ttcgattgag tgcaacaata tccaaattct cttataaata tagagttatt
    11161 cggagcagca gtgcagaacc gcccgaataa ctctatccgg tatatcagac agtttaatca
    11221 aaccgcctta agcaaacagc tatcagtttt tagccaagta agcttccaaa tcttcgctgc
    11281 cgccgatgta tttgccgccg atgaagactt gaggggcagt catcttgccg gtaatggcgc
    11341 gaacggaagt aacggttgca tctttgccca atacgatttc ttcgtaagac aaacctttgt
    11401 cttgcaaagc ttgtttggct ttagcgcaga attggcaacc tggtttagtg aaaattgcca
    11461 cagactcttg agccttccaa tcgggagcaa cgaattgcag catagtatct gcatcggata
    11521 ctttgaacgg atcgcccggt tcttcaggtt cgatgaacat tttttcaacc acgccgtcgt
    11581 taaccagcat ggagtaacgc caagagcgtt taccgaagcc caagtcttct ttaccgacca
    11641 gcatacccat accttcggta aattcgccgt tgccatcagg aatcatgtag atgttgtcgg
    11701 attcttcttc ggcagcccaa gcgttcatta cgaacgtatc gtttacagat acgcagtaga
    11761 ttgcgtcaac gccgttttct ttgaacgcgc cgaacaattc gttgtaacgc ggcaggtgtg
    11821 aagaagaaca agtcggggta aatgcaccgg gcagggagaa tacgactact tttttgcctt
    11881 tgaacaaatc atcggtagac acatctttcc aagtgtcgcc gacgcgggtg cggaatacta
    11941 cggaaggtac tttttgaccg gtacgatctt gcaaagccat tttaagctcc ttaatagatt
    12001 ggtttgagaa ataattgtga atcgctgggc attctacccc atgcaaaatg atttgtataa
    12061 tttatagttc aaataatata aattatttaa aactatcaaa cacaactccg atttgcctgt
    12121 ttcccacata taaagccgaa tgagaaaaaa acaagctgca atgaaaagat tttccggcaa
    12181 ctgcgccctt gcgccgcaaa tcaggacaaa ataccgtctg aaaggctttc agacggtatt
    12241 tattcatacg gtctcggctt atttcgccaa ttcggcacgc agttttcggg ttacgttcat
    12301 catcacttgg agttgttcca gagtttcttt ccagccacgt gttttcaggc cgcagtcagg
    12361 attcacccac agacgctcaa ccggtacaac ctcgatggct ttgcgcaaca ggtgctcaac
    12421 ttcggcttca gtcggtacgc gcgggctgtg gatgtcgtaa acccccgggc cgatgtcgtt
    12481 cgggtatttg aattcgccga acgcggtcaa gagttccata tcggaacgtg aagtttcgat
    12541 ggtgatgacg tcagcatcca tagcggcgat ggccggcaag atgtcgttga actcggagta
    12601 acacatatgg gtgtggatct gagtgctgtc ttcacaaccg gcagaggaca ggcggaaaga
    12661 ttcgcccgcc cagttcaggt aggcatccca atcggcacgt ttcaaaggca gaccttcgcg
    12721 gatggcaggt tcgtcgattt ggatgacttt gatgcctgct ttttccagat ccaatacttc
    12781 gtcgttcaga gccagtgcga tttgtttgca cacggtagcg cggggaatat cgttgcggac
    12841 gaaagaccat tgcagaatgg ttacagggcc ggtcaacata cctttcatcg ggcgtttggt
    12901 caggctttga gcgtaagtag accaagccac ggtcatggct tcaggacggc ttacgtcgcc
    12961 aaagataatc ggtggtttca cgcagcgtga gccgtagctt tgtacccagc cgtattgagt
    13021 gaatgcaaaa ccgctcaaca attcgccgaa gtattcaacc atgtcgttac gctcggcttc
    13081 gccgtgtacc agtacgtcca agtccagttt ttcttgctct tcaaccacca aggcgatttc
    13141 ttttttcatc gcggcttcgt aatcggcggc agacagttcg ccttttttga aggctgagcg
    13201 tgcctggcgg atttcggtgg tttgcgggaa agaaccgatg ttggtcgtcg gcagcagagg
    13261 taggttcaac catgcttgtt gcgctttgat acggtcggca aatggagatt tgcgttggtc
    13321 tgcgttggca ggcaaatcgg ccaggcgttt ggcaacgtct gcacgatgga tttcgctgct
    13381 gttggcacgg gagtcggcag cagcttggct ggcggcgagt tcttcggcaa cagaatcacg
    13441 gccttcgttc aatgcagctt tcagaacgcg caattcttgg tttttttgca gggtgaatgc
    13501 caaccaagag tacaggtcgg gtttgttggc tttcagtttt tcttcaactg acaagtcaaa
    13561 tggagtgtgc agcagcgagc aagagctgga aatccacaaa cggtcaccca gtttggcttg
    13621 cagaggctcg acagtttcca aaactttgtt caggttggcg cgccaaatgt tgcggccgtc
    13681 aatcacgccg gcagacagga ctttgtcgta gtcggcgaac gcgtccagtt gctcgggggc
    13741 gcgtaccaag tcgatgtgca gaccgtcaac aggcagggct ttcaacaatg cggcgtgttc
    13801 ggcaacagaa ccgaagtaag tgctcaacag gattttggcg ttgactttgc tcaaagtagc
    13861 gtaaacgtct ttgtaggctt ccacccattc tttaggcaaa tcgacagcca aagcaggctc
    13921 gtcgatttga atccactcgg caccggcttc aaccaaagca gtcaggattt caacgtaaac
    13981 aggcaacagt ttaggcaaca ggctcagacg gtcgaattcg acggcgcctt tttctttacc
    14041 cacccacagg aaagtcaacg gacctacaac ggtcggtttg gctttcagac cgagggcttg
    14101 ggcttcttgc agttgttgaa catagtgttt ggcattggct ttgaatccgg tatcggcgtg
    14161 gaattcaggc accaagtagt ggtagttggt gtcgaaccat ttggtcattt cgatagcgaa
    14221 ttggtctttg ttaccgcgcg ccagttggaa gaattgttcc aaagacaggt tttggctgtc
    14281 gaagccgaag cgggcgggaa tcgcgccggt ggcgacttgc aggtcgagga tgtggtcgta
    14341 gaaagtgaaa tcgcctacgg caacgaaatc ggcgttggca gcgacctggt gtttccagtt
    14401 tttctcgcgc aagtctttag caacagccag caattcttgc tcgctgattt ctttgcgcca
    14461 gtatttttct tgtgcgaatt tcaattcgcg gaaggcgccg acacgcggga agcctgagaa
    14521 atgtaatgtt gtcatgttga actctccagt tggattttgt aaggaccggt tcaatccgaa
    14581 tcggccggta ttgtaaatca gaatggctcg gatggggcgg tgttttgctt tttagacacc
    14641 ttagatgccg tctgaaactg tttgatacgg ctttaagggc gcacgcctaa aatatggcaa
    14701 atggcgtaag tcagctcgct gcggttaagc gtatagaagt ggaaatcttt cacgccttcg
    14761 cgggacagga ctttgaccat atcgatggcg atacttgccg ccaccagatt gcgcgtacct
    14821 tggtcgtcgt ccaaaccttc atacatttgc gacagccagc ttgggatttt gacgttggtt
    14881 acttgagcca ttttaccgag ctgcttgaag ttggtaacag gcaaaatacc ggggacgatt
    14941 tccacatcga tacccaacat cacgcagcgg tcgcggaagc gcaggtagcg ttccacatcg
    15001 aagaagaatt gggtgatgac gtggttcgcg cccgcatcga ttttgcgttt caaattaatc
    15061 aggtcggctt gtgcggattt cgcttcggga tgcacttcgg gatatgctgc tacagagatg
    15121 tcgaagtcgg cgacggagcg taatagctta accaagtctt cggcgtaaaa cggttttttc
    15181 tcataaccgg ccggctcgtc tccgcgcagg gcgacaatgc ggcggatgcc gctgtcccaa
    15241 taatctttgg caatttggcg caattcgtcg ggagaagcgt cgataccggt caggtgaggc
    15301 gcggcttcca agccggtttc ctgtttgatg cgtttgacga tgccgtgcgt gcggtcgcgt
    15361 tcgccggaat ttgcgccgta agttacggat acgaacttgg gatgcagggt ttgcagacgg
    15421 tggatggagt cccacagcat cgtttccatt tgttcgtttt tcggcgggaa aaattcaaac
    15481 gaaacgttaa tgtcgccttt caaatcagaa agactgttat ttaacgcatt gatttctttt
    15541 gcgtaattca tggctgcgta ccttttatta tcttttatat gatgtttcag gcaacataat
    15601 aaagttgcgc caaacatgag tcaatttcaa aattttcaga tttatcatga aaatttctaa
    15661 tatattacaa aaatagttaa atttccttgt acagcccttc taaactatgc tagagtttgt
    15721 tatgttataa cactgaaagc aaggcaatat atgaaaccaa atattcatcc tgacaattat
    15781 cgaaccgtcc tttttttcga cagcagcgcc aatgaaggct ggttaatccg ctcctgtgcc
    15841 gaaacacacg gaaaaacgat ggtttggaca gacggcaaag aatatccgct gttttcgctg
    15901 gatacttctt ccgcatccca tcccgtctat accggcaagc agcgtaacgt caacaccgaa
    15961 ggacgcgcca gcaagttcaa ccaacgtttc caatccgtca tgtcatcgtt tagaaaggac
    16021 aaataatgca ggttctgtct tcactcaaaa ccgccaaaca acgccaccgc gactgccaaa
    16081 tcgtcagacg caggggcaaa gtttacgtca tctgcaaaag caatccgcgt tttaaagcgc
    16141 gccaacgctg actccctgcc cttcctgctt cgg
//
LOCUS       DAWKOX010000029        15458 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.029, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000029 DAWKOX010000000
VERSION     DAWKOX010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15458)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15458)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15458
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.029"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(412..858)
                     /gene="smpB"
                     /locus_tag="WJK78_000670"
     CDS             complement(412..858)
                     /gene="smpB"
                     /locus_tag="WJK78_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ7597625.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(913..1923)
                     /gene="waaF"
                     /locus_tag="WJK78_000671"
     CDS             complement(913..1923)
                     /gene="waaF"
                     /locus_tag="WJK78_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ7597626.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            complement(2054..2129)
                     /locus_tag="WJK78_000672"
     tRNA            complement(2054..2129)
                     /locus_tag="WJK78_000672"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2094..2096),aa:Asn,seq:gtt)
     gene            complement(2320..3072)
                     /locus_tag="WJK78_000673"
     CDS             complement(2320..3072)
                     /locus_tag="WJK78_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ7597627.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEVRYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPNAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            3383..3907
                     /locus_tag="WJK78_000674"
     CDS             3383..3907
                     /locus_tag="WJK78_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ7597628.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGDNAPPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHRVVADIPADVRRRN
                     AASLQLSRCASIADDPSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSAASA
                     ALCGTSSSVSTAAA"
     gene            complement(3996..4275)
                     /locus_tag="WJK78_000675"
                     /pseudo
     CDS             complement(3996..4275)
                     /locus_tag="WJK78_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246300.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(4647..5792)
                     /gene="dapE"
                     /locus_tag="WJK78_000676"
     CDS             complement(4647..5792)
                     /gene="dapE"
                     /locus_tag="WJK78_000676"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ7597629.1"
                     /translation="MTETQSLELAKELISRPSVTPDDQNCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARGELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYEGILARLLAGNAV"
     gene            complement(5906..6526)
                     /locus_tag="WJK78_000677"
     CDS             complement(5906..6526)
                     /locus_tag="WJK78_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenosine tetraphosphatase"
                     /protein_id="HEZ7597630.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPDYNRWLDNFDTEKYASFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGRQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(6560..7069)
                     /locus_tag="WJK78_000678"
     CDS             complement(6560..7069)
                     /locus_tag="WJK78_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ7597631.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQAQESVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGNTFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(7164..7715)
                     /gene="azu"
                     /locus_tag="WJK78_000679"
     CDS             complement(7164..7715)
                     /gene="azu"
                     /locus_tag="WJK78_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ7597632.1"
                     /translation="MKTYLALISAAVIGLAACSQEPAAPAAEATHAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(7996..8418)
                     /locus_tag="WJK78_000680"
     CDS             complement(7996..8418)
                     /locus_tag="WJK78_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ7597633.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLAPKPEKPPKTNT
                     LHLSKAALESFGSAAVKLEKRHPELAEALANLVRRHGA"
     gene            8549..11299
                     /gene="secA"
                     /locus_tag="WJK78_000681"
     CDS             8549..11299
                     /gene="secA"
                     /locus_tag="WJK78_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ7597634.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHTLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPIQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            11443..13215
                     /locus_tag="WJK78_000682"
     CDS             11443..13215
                     /locus_tag="WJK78_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ7597635.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETINRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            13402..15330
                     /gene="rpoD"
                     /locus_tag="WJK78_000683"
     CDS             13402..15330
                     /gene="rpoD"
                     /locus_tag="WJK78_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ7597636.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         3970 a         4373 c         3731 g         3384 t
ORIGIN      
        1 tgatttttta aacttctgct tgcttgcttc gagtttcata ataaattttc ctttgtcaag
       61 taaaaataaa tggggcgtgg attttagcat aaaactgaac aaaaaatgtc atttagctca
      121 catttttctc tatttatttc ttatttatta aaggtaaacg tttgcttttt gctattttgt
      181 caagccagtt tgaaaatgtg tataattgcc ctcgttattt acaaaaattt caggaaaaat
      241 gaccgcactt tacccttggc taatgccaat ttatcatcaa attgctcaaa cctttgacga
      301 aggtttgggg catcatgctg tgctgattaa agcggatgct ggtttaggtg tagaacgttt
      361 acacatcagg cggcagcctt gcccataccc tctgaagcac tgtttccaca atcagcgcgt
      421 atgcttaatc aaccgctgtt tctcgcgttt ccaatccgcc tctttcatac tctgacgttt
      481 gtcgtgctgt ttcttacctt ttgccaaacc gatttccatc ttgatttttc cgcgcgaaaa
      541 atgcaaatcc agcggcacga tggtgtagcc ggcacgttcg gttttgccga ttaatttgtt
      601 gatttccgac tggttcaaca agagcttgcg cggacgtacg gcatctggtt taatgtgtgt
      661 cgaggctgtg ggcaaagccg taatatggca gccgaccaga taaaacgcgt cttttttcca
      721 atagatataa ctctctttaa gctgtacgcg cgcggcgcgg attgctttga cttcccagcc
      781 ttccaagacc aaaccggctt caatccggtc ttcaatgaaa aaatcgtgaa atgctttttt
      841 attgttcgca atagccataa acatcctatc aatatccgcc gtcagacggc ataaacccga
      901 aaacagaacc catcataccg cctcttcaac cgcctgcaca atcttctcgg gatacagcct
      961 gttgaggcag tcggtatgcc ccagcggaca ttcccgctta aaacagggcg aacattccaa
     1021 gtgcaggctg acgattttcg ccctgtcgct caaaggcggc gtatgcgtcg ggctggaaga
     1081 accgtaaacc gccaccacct tcctgcccaa tgccgccgcc aagtgcatca gcccgctgtc
     1141 gttgcacaca accgtgtccg ccaacgacag caaatccatt gcctgcgaca aatcggtttt
     1201 gccgcacaaa ttgacacaca taccgtctga aaggcagttg atttcctcgg caatttcatc
     1261 atctttttgc gaaccgaaca gccaaacctg ccaacccgcc gccagataat gtttgcccaa
     1321 ctcggcaaaa tgccttgtcg gccaacgctt tgccggcccg aattccgcgc ccgggcaaaa
     1381 tgccaaaaca ggctttccaa gattcaaacc gaaagtttcg acagaaattt cccgccgccg
     1441 ttcatcaatg gaaaactcgg ggaatcccga atgcccgtca aaatcttcct gactcggatg
     1501 cgcgagagcc gtatatctgt ccaccatcaa aggcagacgt tccttatcca gcctgcgtat
     1561 atcgttcaac agaaaataac ggctttcacc gacataaccc gtccttttgg caatacccgt
     1621 tgctagcgcg atgactgccg atttcaaaga accgggcaac acaataacct gatcgtatcc
     1681 gcgccgcccc aaatccctgc cgacccgcca acggcgtttc aactccaacg caccgtgtcc
     1741 gaacggattt tcaagaatct cattcacttc cggcatacgc tcaaacaccg ccatcgacca
     1801 cttcggtgcg aacacatcaa tcgtgcaacc ggggtgaagt tccttcaaac ggcggaacaa
     1861 gggctgggtc atcacgcagt cgcctatcca actgggggaa ataatcagga ttttgatgga
     1921 cataacaaga aaccgaaatc agacaggcgg aattttaccg cgaaaccgtt ggaaaaccta
     1981 tcttgtctca ttccgaacgc cgtacgtgca aatatgaaaa agcccgaaca ttcaagttcg
     2041 ggcttcaaaa ttctggctcc ccgacctggg ctcgaaccag ggacctgcgg attaacagtc
     2101 cgtcgctcta ccgactgagc tatcggggaa tggggcgtat tatagcgtcc ggaaaaaatg
     2161 tgtcaatcct taattttgga aaaatgggcg acaaaacgac aagcatatga atcagaaaga
     2221 cattaagacc gatgccttaa aaggattgcc gttgtatgaa tttccacagc cgtcatcaca
     2281 ccatatttaa gcccgatgag ccgttctgcc ctcccccgct taaaacaatg ccgtctgaac
     2341 ttcgccgcgt tccaaagcca gtaaaaactg tttgcggttc aacccgcccg cgtagccggt
     2401 cagtttgccg tcgctgccga tgacgcggtg gcagggaatc aagatagaca ccttgttctg
     2461 cccgttggcg gcggcaacgg cgcggacggc gttggggttg cccaaacgct gcgcctgctc
     2521 tttgtagctg cgcgtttcgc cgtaaggaat cgccaagagc gcgtcccatg cctgcttttg
     2581 aaactcggtg ccaatctgct ccaaaggcgt ggcaaaggtt ttcagacgac ccttgaagta
     2641 taagtccaat tcctgccgca aaagttgcgt ccgctcatcc tcccgaaaca caaaccgtcc
     2701 gcgcaaggct ttttggacgg cggcaatttc ctgttccaaa tgcttctgtc cgacaaactc
     2761 cagcagacac aatcccttat ttccgaacac cgccagcatc tcgcccaaag gcgtggcaat
     2821 ggcggcacac accagctcat tcaaactgtc gggataacgc acttccaaca gacggatggc
     2881 tcggcggata cggacatatt cttcaggcgc gcagccgata ttgtcccaaa aatcccgatc
     2941 gaactgcccg gcttcgcatt ccgtcagatt gggatgcggc ataacgccgc actcaaaaac
     3001 ccgggtttcg aggcaatggc ggatttcatc ccattttgac ggcagattgt ttaaggaagg
     3061 cagggtaatc attcgtttgc tccgtatctc tatcatggat ttggcggcaa aatccccaat
     3121 tctcgtcatt cccgcacgcc gatgcaggaa cgggctatga cgtaaatctt gagggttggg
     3181 ttgcggcaat gcctaaatat gcgatatttc taaagcctca gggaaaggaa ttaaagactt
     3241 cagacgacct gcaaagggtc gtctgaaacc acgatttttg catttacgca ttccggcaca
     3301 tcatccaacc gtttcggcac attcctgccg ccgttgacag cctataatga atccacttat
     3361 tcatcaagca aaggaatcat ctatgcaaac ccgcatcctc tccgccgtac tgctggcttt
     3421 ttcaaccgct gcctttgccg ggggcgcatt cacgctgcaa ttcgacaacc cgtccgaaga
     3481 cggcggcttc acgcaaaacc agcttttgag tgcgccttac ggcttcggct gttcaggcga
     3541 caatgctccg cccgcgctgt cgtggaaaaa tccgcccgcc gggacaaaaa gtttcgtcct
     3601 gaccgtttac gataaagacg cgccgaccgg actgggctgg atgcaccggg tggtcgccga
     3661 cattcccgcc gatgtccgcc gccgcaatgc ggcctcgctg caattaagcc gctgcgccag
     3721 catcgccgac gacccgtccg cagccatatc ggcggtaatc agtttgcgga tttgccgcat
     3781 caggttgacg ccttcgtaca cggcaaaacc gatgccgtca tgctgcaacc acgccaacac
     3841 gccgcaaagc gcggcctccg ccgcattgtg cggcacttct tcatccgtca gcaccgccgc
     3901 cgcataatca aacgccgcgc ccatccgccc agggtgcggc agcttcaccg catcgcacac
     3961 tgcctgcgcc gtcccgtatt gtgcggcaaa cctttctacg gtttcctgtt cgaaagcaat
     4021 ccattgcgcc tgatagaggc cgtctgaatc gggaatatta ataacgtcaa acgtctgtcc
     4081 gcctgccaac gcaaccgcct cacccgccgc aatcctcaat tcgcgcctcg cccaccgcag
     4141 cttcttgctt ccgcgccgca cgataagcac agctggttca tataccgcca cgctgcggta
     4201 caaggcggta tgatgttgca cgatgccgcc caaagcaccc aatcgttcgc gcgtatgaaa
     4261 gtaatttgac ggcactatta tctccaacac gcagggccgc acataaggcg cagccctgtt
     4321 taccctgatt tggaaggggt tacttcccaa aaataaacca aaatcccact gccccgaatg
     4381 gccgagtttc aaccatattc cgtcggtgtg cctgcaactt gactccctcc cctgtggggg
     4441 agggttgggg agagggtaaa acggggcaga tacagacaat atttccgtta ccgccccgat
     4501 gccctctccc taaccctctc ccacgggaga gggaatggat tgccgttgaa ataaatcgct
     4561 ctacataaaa aatcaatgtg ttatctcaaa cccacgttag gtctaagcaa atggtcggac
     4621 atccgtatcc ggcaagcaag ctgctttcag acggcatttc cagccaacaa gcgcgccaat
     4681 atcccctcat acaccgcaga cagcttcgga atatcgtcca gccgcacgtt ttcgttgatt
     4741 tggtggatgg tggcattgga cgggcctaat tcgatgagtt cttttgcaat ggctttgatg
     4801 aagcgtccgt ccgaagtgcc gccggtggtg gacaattcgg cctcaatgcc gcaggtttcg
     4861 gcaatggctg cgcgtgccac gtcggtcagt ttgcccgctt gggtcagaaa gggctgcccc
     4921 gaacacgacc actgcaaatc gtattgcacg ccgtgtttgt ccaaaatggc gtggacgcgt
     4981 tgtttcagcc ctgcttcggt ggactcggtg gagaagcgga aattgaattt gacgttcaac
     5041 tcgcccggaa tgacgttggt cgcgcctgtg ccgccgttga tattggaaat ttgaaagctg
     5101 gttggcggga aatattcgtt gccttcgtcc cagacttcct gcgtcagctc taacaaggcc
     5161 ggggcaaaag tatgcacggg attgattgcc aaatgcggat aggcaatatg gccttgcttg
     5221 cctttgacgg tcaggttgcc cgacagcgag ccgcgccggc cgtttttaat catatcgccc
     5281 aatttgtcca cggctgtcgg ttcgccgacg atgcagtagt caatcaactc gccgcgcgct
     5341 ttcaacacat cgacgacttt ggtcgtgccg tccagcgcgt cgccctcttc gtcggaagta
     5401 atcaggagcg cgatgctgcc ttgatgatcg gggtgttcgg caacaaagcg ttcgcaggcg
     5461 gtaacgaaac aggcgatgct ggttttcatg tccgccgcac cgcgcccgta taatcttccg
     5521 tcgcgctcgg ccggctcgaa cgggggcgaa tcccattttt cgacagggcc tgtcggtaca
     5581 acgtcggtat gccctgcaaa acagacgacg ggagctttcg tgccgcgtcg caaccagatg
     5641 tttttggtgt cgccgaaatg gagttcttca gccgcaaaac cgattttgtg caggcgttcg
     5701 gcaaggagtt tttggcaatt ttggtcgtcg ggggtaacgg atgggcggga aatcaattct
     5761 ttggcgagtt ctagggattg ggtttcggtc atatttgttc acttttgaaa ttagaccatc
     5821 tgaaacgttc tgaatgtgat tttcagacgg catttaggtt aggttggcat acggggtggg
     5881 tatttttacc cgtcagtctt ctgaatcatt tgccgtgaca cgcttcgtaa agcggcagca
     5941 aatcttccac cgtttccgct atccatttcg cgacatcctg cctgcccaaa tcgtcgcgtt
     6001 cgatgtgttt gccgatgcag aagaaatctt cgtcgttttg caaccttcgg tcggattcat
     6061 tttgctgcgc gacagtgcgg tagtcgtcgt attcgctttc cgcgccgtgc cacatatcga
     6121 aagaagcgta tttttcagta tcaaaattat ccaaccaacg gttgtaatca ggcagcgcaa
     6181 tcggcgacac gtcggctttg tagcaatgcc agtccaagct gacactcaaa cggcggcggt
     6241 tgagcagtat cgacaaaatc gcggcggaat ttttatattg ttcgtatttg aagtaggcaa
     6301 agaaatgggc gcgaacctgc cagccgttgc accagcgttc gatgtgcggc ggcgcaaacg
     6361 gcgcacccaa ttcggcggca acctgctgaa tcagctgctg ccatatctgc cagttttcct
     6421 tgtagtcggc tttgatttgc ggaatgcttt caggctggta ttttttaagc tgggcaaact
     6481 ggaaaaacgg gatattgaac aaatcgcaac ttttcggggt cagcataata tatccttgag
     6541 acgattgttt cagacggcat tatttgcgcc ggcgcgccgc cataatttcg ccgatttcgg
     6601 tcagtttttc ttttgggata aaggtgttgc ccatatcaaa cagcggctct tcaatcgcca
     6661 aatgaacatc atatcccgcc acaaaacgtt tgaacgcttc ctcatcgggg acataagcgt
     6721 tgtctgcttc gagtttggca aattcggcgg aaacagccgc ccagttgtcg tgcagcccga
     6781 tatgttggcg caaaagctcg tccacgcttt cttgggcttg cggcgcatat tgcagcagca
     6841 gcgggaagaa gttttcttct tcgtcttcat ggtgcagcgg cgcggcaacg ttgaaatact
     6901 gggcgatttg gcggatggtt tgcaaaacaa tctgattgca gccgttttcg gcgatatagt
     6961 ccgacagcat ggcgacttgt ccgcaaaaac ggcgcacttt gccgtggcag gcatacagca
     7021 tttcaatcgg ttcggcaaag gtaacgcttt tggtttcaaa cggattcatg ttttcgttct
     7081 caacgggcac ttttcaagca gtcattttat aataaaacag cctgcacaaa gcaggctgtc
     7141 cgtcttttga gactttaagc ggattaatcg accaaagtca ctttgccgtt catcaaagca
     7201 ccgtgacctg ggaaggtaca agcgaatttg tattcgccgt cagccagttt ggcaggatcc
     7261 aaagtcaggg aagactcttc gccgccgccg atcagtttgg tgtgggcaac aacgcgcgca
     7321 tcgtcaggtt tgacatagtc ggtatcggca gcacctacgc cgtctttaaa tacgccgtcc
     7381 atgtcttcag ctttggcaat cacaaggttg tgacccatgc tggctttggg ttgcgtaccg
     7441 gtatgtttca gagtgatggt gaactcttta catgctttgc tgacttggat gtctttggtg
     7501 ttgaactgca tattgtcgtt ggattcgaca gttgccgcac agttgccggc agcaggggct
     7561 tcggcagcat ctgcaggagc agcttcggcg gcaggtgctt cggaagcggg tgcttcagca
     7621 gcatgagttg cctcggcagc aggcgcggca ggttcttgag agcaggcagc caaaccgata
     7681 acggcagcag aaatcagagc cagatacgtt ttcataacaa atctccaatc gataaaataa
     7741 tattcggttt tacggaaatc aaagtgcaac cgccattaac aaaaccttga aaaagattcc
     7801 gccgcgttgc acaaacagat gtttcggggc ggcattttgc tacaaatttc atttgaaatc
     7861 aaagcctgtc tgcaagttta caatcgttta ctttaaaagg ggcaatttta ccccgaacct
     7921 atttctttag tattagaccc attatccttt acttcttaat attaacggat gtttacacaa
     7981 attcccgtat acattttatg cgccatgcct tctaaccaag tttgccaatg cctccgccaa
     8041 ttcgggatgc cgtttttcca actttaccgc cgccgaaccg aaactctcca gcgcagcctt
     8101 actcaaatgc agggtattgg ttttcggcgg tttttccggt ttcggggcca gcctgaccga
     8161 aacagagcgt atcgaagcat caagccctgc caactgcggc aataccgacg gtgcaatcat
     8221 tttcaagcgc gatgccgcca tattgtttgc cgccaaaagg acaagcctgc cgtcttcgat
     8281 acatgccgtc tgaaaatgcg ggtgcaggtt ggcaggcagc agttttttca cggcggcatc
     8341 caaccgccgc cactgtcccg cctgtttcaa aagtccggaa agcagcgcgt cccgcctgcc
     8401 caactgttcc aaattcataa aacatacacc caaaaagatt gaaataccgc aaacgcgcct
     8461 ttatttcaga cggcattagc actttgcaca aacgcttgtg ttaaaatcgc gttttcgccc
     8521 actattatat caggcgcagg aattattcat gctgacaaac attgccaaga aaatcttcgg
     8581 cagccgcaac gaccgcttgc tgaaacaata ccgtaaatcc gttgccagaa tcaacgcgct
     8641 cgaagaacag atgcaagccc taagcgatgc tgatctgcaa gccaaaactg ccgaattcaa
     8701 acaacgcctc gccgacggtc agactttgga cggcattttg cccgaagcct tcgccgtctg
     8761 ccgcgaagcg tcccgccgca ccctcggtat gcgccacttc gacgtgcagc ttatcggcgg
     8821 tatggtgctg catgacggca aaatcgccga aatgcgtacc ggcgaaggca aaaccctggt
     8881 cgccaccctc gccgtctatc tcaacgcgct ggccggcaaa ggcgtacacg tcgttaccgt
     8941 caacgactac ctcgcctcac gcgatgcggg catcatggaa ccgctctata atttcctcgg
     9001 ccttaccgtg ggcgtgatta tttcagatat gcagccgttc gaccgtcaaa acgcctatgc
     9061 cgccgatatc acctacggca ccaataatga attcggcttc gactacctgc gcgacaatat
     9121 ggttaccgac caatacgaca aagtgcagcg cgaattgaat tttgccgttg tcgatgaagt
     9181 ggattccatc ttgattgacg aagcgcgcac tccgctgatt atctccggcc aggcagacga
     9241 caacatccag ttgtaccaaa tcatgaacac cgtcccgccc cacctcgtcc gccaagagac
     9301 agaagaaggc gaaggcgact actgggtaga tgaaaaggcg caccaggtca tcctgagcga
     9361 agccggccac gaacacgccg agcagattct gacccaaatg ggattgctgg cagaaaacga
     9421 ctcgctctat tctgccgcca acatcgccct gatgcaccac cttatggcgg cattgcgcgc
     9481 gcatacgtta ttccacaaag accaacatta cgttatccaa gacggcgaaa tcgtcatcgt
     9541 tgacgaattt acaggccgtc tgatgtccgg ccgccgctgg tccgaaggcc tgcatcaagc
     9601 cgtggaagcc aaagaaggcg tggaaatcaa acgcgaaaac caaaccctcg cctccatcac
     9661 cttccaaaac tatttccgcc tgtacaccaa gctctccggc atgaccggca cagccgatac
     9721 cgaagccttc gagttccaaa gcatctacaa cctcgaaacc gtcatcatcc cgaccaaccg
     9781 ccccatacaa cgcaaagact tcaacgacca gattttccgt tccgccgaag aaaaattcga
     9841 agccgtcgtc aaagacatcg aagaatgcca caaacgtggg cagcccgtcc tcgtcggcac
     9901 aaccagcatc gaaaactccg aactggtctc ccatcttttg caaaaagccg gtctaccgca
     9961 caacgtcctc aacgccaaag aacacgaacg cgaagccctg attgtcgccc aagctggcaa
    10021 agtcggcgcg attaccgttg ccaccaatat ggcgggacgc ggtacggaca tcgttttagg
    10081 cggcaacctg aagcaccaaa ccgatgccat ccgtgccgac gaaaccttga gcgacgaaga
    10141 gaaacaggca caaatcgccg cactcgaaaa cggctggcag gcagaacacg ataaagtaat
    10201 ggaagcaggc ggcctgcaca tcatcggtac ggaacgccac gaaagccgcc gtatcgacaa
    10261 ccaattgcgc ggacgttccg gccgtcaggg cgaccccgga tccagccgtt tctacctttc
    10321 gtttgaagac ccgctgctgc gcttattcgc actcgaccgc gccgccgcca tcctcaaccg
    10381 tctcgccccc gaacgcggcg ttgccatcga acacaacctg ctgacgcgcc aaatcgaagg
    10441 ggcgcaacgc aaagtcgaag gcagaaactt cgatatgcgc aaacaggttt tggaatacga
    10501 cgacgttgcc aacgaacagc gcaaagtcat ttacagccag cgcaacgaaa ttctgaccag
    10561 caaagacatc agcgacctga tgcaggaaat ccgttctgat gtcgtcagcg acctcgtgga
    10621 tacctatatg ccgcccgaca gcatggaaga acaatgggac atcccgactt tggagaaccg
    10681 tctggctgcc gaattcagac tgcacgaaga catccaatcc tggctgaagg cggacaatgc
    10741 gattgacggt caagacatca aagaacgcct gatcgaacgc atcgaaaacg aatatgccgc
    10801 caaaaccgaa ctggtcggca agcaggcaat ggccgatttc gagcgcaacg tgatgttgca
    10861 ggtcatcgac aaccaatggc gcgaacacct cgccgctatg gactacctgc gacaaggcat
    10921 acacctgcgc agctatgccc aaaaaaatcc gaagcaggaa tataaacgtg aagcctttac
    10981 catgttccaa gacctgtgga acggcatcaa attccatatt gcctccctgc ttacctcggt
    11041 tcaaatcgaa caaaaccctg tcgcggtggt tgaagagcaa cccatcggca acatccagtc
    11101 catccattcc gaatcgcccg atatggaaga acttttgggt cagtcgcaaa ccgatctggt
    11161 taccgaagcc tttaatcccg atgggacgga tttcagcccc gaagccttgg aagcgcgggg
    11221 acaaatcgtc caccgcaacg acccctgccc ctgcggcagc ggtttgaaat acaaacaatg
    11281 ccacggcaaa ctggcttgag cgtttgaacg caaatgccgt ctgaacatcc ggtttccggc
    11341 ttcagacggc attttgcctg aaccgccaca tccgaccgcc attccgaaaa atcccgattt
    11401 cgtaccgtcc aaactaaaaa caggcatccg ccccgccgaa ctatgattcc atccgacttc
    11461 attgacgaac ttctggccaa aaccgatatt gtcgacatca tcgacgaaca ggttccgctg
    11521 aaaaaaggcg gggcgaacta tatggcgtgt tgcccgttcc acaaggaaaa aacgccgtcg
    11581 ttttcggtca gtccgaccaa gcagttttac cactgtttca gttgcggggc gcacggttcg
    11641 gcgattggtt ttgtgatgga acatcagggg ctgtcgtttc cggaggcagt gcagttcctt
    11701 gccgaccgcg tgggtatgat tgtgcctaaa gtgcgcgggc agaacgataa tcccgaagtc
    11761 cgtgccgaac gtaagaaaaa gcagcagacg ctggaagaaa cgacagcggc ggcggctgat
    11821 ttttatgcgc aacagttgaa attcaatccg acggcgaagg cttatttgga caagcgcggc
    11881 ttgagcgcgg aagtcatcgc gcattatggt ttgggctacg cgcccgacgg ctggcagcct
    11941 ttggcgcaag tattccaacc gtacccgaat accgcgttgg tggatacggg tatggtgatt
    12001 gacaatgagg ggcggtatta cgaccgattc cgtcatcgga ttatgttccc catccgcaat
    12061 ccgcgcgggc aggtcatcgg tttcggcggc agggtactgg acgactccaa acccaaatat
    12121 ctaaactctc ccgatacgcc tttgtttgat aaggggaaaa acctttacgg cttgtatgag
    12181 gggcgtgccg ctgtcaagga agcggagcgg attctggtgg tcgaaggcta tatggacgtg
    12241 gtcgcgctgg cacagttcgg cgtgggctac ggtgtggcgg ccttgggcac ggcaacaaca
    12301 gctgaacacg tcaaaatcct aatgcgtcag gcggacagta tttatttctg tttcgacggc
    12361 gacagcgcgg ggcgcaaagc ggcttggcgc gcgctggaaa acgcgctgcc gcagttgaag
    12421 gacgacaaat cgctgcattt tttgttcctg ccggaagaac acgaccccga cagttacatc
    12481 cgtgcctacg gcaaagcgca atttgaagac gcgcttctga atcaaagcaa gcccttgtcg
    12541 gagtatttct gggaacacct ttcagacggc attcatctca atacgcagga aggcaaggcg
    12601 gaattggtaa aaaccagttc gccgcttttg gcgcagatta ccgcgccggc attggcttat
    12661 ttgttaaaac aacggcttag cgaactggtc ggcatcgacc ccgacaacct cgcgcaactg
    12721 ctgggacagg aagcgccgaa gcggcacgtc aaacaaaaaa actacaaact gccgccgatt
    12781 tccgtcaaac agcccgttat gccgacattg gtgcaacggc aaatccgcag cctcttgata
    12841 aatccggatt gggctgcata tatagacctg cccgattatc tggcgttgga cggcgatttc
    12901 gcctgccttg ccaacctcgc cgaaaccatt aaaaaccatc cttccgtgcc ggcaaccgca
    12961 caggttttgg aacatatgcg cggttcgccc tacgaagaaa caatcaaccg catcttccgg
    13021 tcggcccttc aatcggaaga aatggaaggc ggcggcgaag aagattgcga aaacttccaa
    13081 atcggcatca aaaaactgct caatgagtta aaatacagcc aaatcgaaac attaaaacaa
    13141 aaaagcctgc aatccggctt aaatgaaagc gagaaaaaac ttttgctgtc gctgctgacc
    13201 gcaaaacaaa attgaccggc ggattccgcc atccgtaaac cgttatgccg tctgaaaagc
    13261 attcaccccg gctgcaacaa cgacacctgc agaacaccca tccccaaaag ccttcagacg
    13321 gcatcagagt accctactct gccacgcctt caggtgcgtc caaacgcaaa ccgtcggcat
    13381 cttgccaaca gaaagcagac aatgtccaaa aaccaaaatc acgaagaata ccaagacgat
    13441 gcccgccccc tgacgattga ggaacaacgc gcgcgcctgc gccaactcat cattatgggc
    13501 aaagaacgcg gctacatcac ctactccgaa atcaatgacg cactgcccga cgatatgtcc
    13561 gatgccgatc aaatcgacaa catcgtcagt atgatttccg gtttgggcat ccaagttacc
    13621 gaacacgccc ccgatgcgga agacatattg ttaagcgaca atgccgccgt taccgacgat
    13681 gatgccgtcg aagaagccga ggccgccctt tccagcgcag attccgagtt cggcaggacg
    13741 accgaccccg tccgtatgta tatgcgcgaa atggggcagg tcgacctgct gacccgcgaa
    13801 gacgaaatca tcatcgccaa aaaaatcgaa aacgccctga aaaatatggt tcaggccatc
    13861 tccgcctgcc cgggttccat tgcggaaatc ttagaactca tcgaaaaaat ccgcaaagac
    13921 gaaatccgcg tcgacgaagt cgtagaagcc attatcgacc cgaatgaagt attgctcaac
    13981 gaattgggct tggggcactt ggaaaccaca gcacccgaga aaccttccaa cgacaattcg
    14041 gacgaaaacg aagacgacga agaatcggaa gaagatgcgg atgaaatctc ggcagccaat
    14101 ctcgccgaat tgaaacaaaa agtcatcggc cactttgccc aaatcgaaaa agactacaaa
    14161 aaaatgattg gccgtttgga aaaacaccac agccggcaca aagactatct cgcctaccgc
    14221 gacgcgattg ccaacaaact gctggaagtc cgtttcgcca cccggcaaat cgacagcctc
    14281 agcagcagcc tgcgcggaaa agtagaaaac atccgcaaac tcgaacgcga aatccgcgac
    14341 atctgcctcg accgcgtcca tatggagcgc gactacttca tccaaaactt cctgcccgaa
    14401 atcaccaatc tggaatggat tgaagaagaa atcgccaaag gcagggtttg gagcgacgcg
    14461 ctcgaccgct tccgccacgc catcctcgaa aaacaaaccg agttggcgga tatggaaaaa
    14521 gaaacccgca tttccatcga agagttgaaa gaaatcaaca aaaatatggt gtcgagcgaa
    14581 aaagaaaccg cagccgccaa acaggaaatg attcaggcaa acttgcgcct cgtgatttcc
    14641 atcgccaaaa aatacaccaa ccggggctta caattccttg atctgattca ggaaggcaac
    14701 atcggtttga tgaaagcggt cgataagttc gaataccgca gaggctataa attctccacc
    14761 tacgcaacct ggtggatccg ccaggcaatt acacgctcga ttgccgatca ggcgcgtacc
    14821 atccgcattc cggtacatat gattgaaacc atcaacaaga tgaaccgcat ctcgcgccaa
    14881 caccttcaag aaaccggcga agaacccgat tccgccaaac ttgccgaact gatgcagatg
    14941 cccgaagaca aaatccgcaa aatcatgaaa atcgccaaag agccgatttc gatggaaacc
    15001 cccatcggcg acgacgacga ttcgcacttg ggcgacttca tcgaagatgc caacaatgtt
    15061 gcgccggccg atgcggcaat gtacaccagc ctgcacgaag taaccaaaga aatcctcgaa
    15121 agcctgaccc cgcgtgaggc aaaagtcctg cgtatgcgtt tcggcatcga tatgaacacc
    15181 gaccacacgc tggaagaagt cggcagacag tttgacgtaa cgcgcgaacg catccgacaa
    15241 atcgaggcaa aagcactccg caagctgcgg catccgacaa gaagcgaccg tttgagaagt
    15301 ttcttggaca gcgaagacag caagctgtaa accaaaaaac cgcaggtttc aaatacctgc
    15361 ggttttttct tacacaataa acaacgcttc cacatatccc acactcctat cccgagacct
    15421 ttgcaaaatt ccccaaaatc ccctaaattc ccaccaag
//
LOCUS       DAWKOX010000030        15198 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.030, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000030 DAWKOX010000000
VERSION     DAWKOX010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15198
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.030"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(85..477)
                     /gene="rpsI"
                     /locus_tag="WJK78_000684"
     CDS             complement(85..477)
                     /gene="rpsI"
                     /locus_tag="WJK78_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ7597637.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(487..918)
                     /gene="rplM"
                     /locus_tag="WJK78_000685"
     CDS             complement(487..918)
                     /gene="rplM"
                     /locus_tag="WJK78_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ7597638.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1096..1275)
                     /gene="ssrS"
                     /locus_tag="WJK78_000686"
     ncRNA           complement(1096..1275)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WJK78_000686"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1281..1586)
                     /locus_tag="WJK78_000687"
     CDS             complement(1281..1586)
                     /locus_tag="WJK78_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ7597639.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMATLNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1597..1926)
                     /locus_tag="WJK78_000688"
     CDS             complement(1597..1926)
                     /locus_tag="WJK78_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597640.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(1981..2970)
                     /locus_tag="WJK78_000689"
     CDS             complement(1981..2970)
                     /locus_tag="WJK78_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ7597641.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEERE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3093..5795)
                     /gene="ppc"
                     /locus_tag="WJK78_000690"
     CDS             complement(3093..5795)
                     /gene="ppc"
                     /locus_tag="WJK78_000690"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ7597642.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIARTEEPYRRAIAYIMARAMG
                     KARSLGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVTELFQHAGLEDYNSLNEEQKQAVLLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPRSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPDKAKVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            5838..6731
                     /locus_tag="WJK78_000691"
     CDS             5838..6731
                     /locus_tag="WJK78_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ7597643.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
     gene            complement(7131..7355)
                     /locus_tag="WJK78_000692"
     CDS             complement(7131..7355)
                     /locus_tag="WJK78_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HEZ7597644.1"
                     /translation="MDAVQELEHRITELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDTQEPYSLRDEIPPHY"
     gene            complement(7356..8744)
                     /locus_tag="WJK78_000693"
     CDS             complement(7356..8744)
                     /locus_tag="WJK78_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ7597645.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGMMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIVCVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(8830..9651)
                     /gene="prmC"
                     /locus_tag="WJK78_000694"
     CDS             complement(8830..9651)
                     /gene="prmC"
                     /locus_tag="WJK78_000694"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ7597646.1"
                     /translation="MTFDKWLGLSKLPKNEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISPPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(9658..10101)
                     /locus_tag="WJK78_000695"
                     /pseudo
     CDS             complement(9658..10101)
                     /locus_tag="WJK78_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10166..11650)
                     /gene="tldD"
                     /locus_tag="WJK78_000696"
     CDS             complement(10166..11650)
                     /gene="tldD"
                     /locus_tag="WJK78_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ7597647.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRESYASVPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      11828..11931
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            11998..13221
                     /gene="cytX"
                     /locus_tag="WJK78_000697"
     CDS             11998..13221
                     /gene="cytX"
                     /locus_tag="WJK78_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ7597648.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRQARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGVSANNISAKLSETPIAVAVAVVGTLLAVLLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            13218..14318
                     /locus_tag="WJK78_000698"
     CDS             13218..14318
                     /locus_tag="WJK78_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ7597649.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNASAEHGSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVVGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSLARRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALVDGKDAPERDEESGLAYIRRQD"
     gene            14339..14956
                     /gene="thiE"
                     /locus_tag="WJK78_000699"
     CDS             14339..14956
                     /gene="thiE"
                     /locus_tag="WJK78_000699"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ7597650.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGDE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT         3131 a         4315 c         4248 g         3504 t
ORIGIN      
        1 ctgtaatctt tagattgcca atgggaaacc gtctactaca aataaaaaac cctgcgataa
       61 gcagggtttt ttgaatttcc aacattaacg tttggagaat tgttttgcac ggcgtgcttt
      121 gcgcagaccc ggttttttac gttcaacttc gcgggcatcg cgggtaacaa aaccagcttg
      181 agacaaggcg ggtttcaacg cggcatcgaa gtcgatcagg gcacgggtaa tgccgtggcg
      241 gattgcgccg gactggccgg tttcgccgcc gccaacaaca ttgactttga tgtcgaaaga
      301 ttcggcgttt tcagtcagaa ccaagggttg gcgaacaacc attcggctgg tttcgcgtgc
      361 gaagaattcg tcaacgggac ggccgtttac gatgatttga cctgtacctt taatcaggaa
      421 tacacgagcc actgaacttt tgcggcggcc tgtgccgtag tagtatttac cgttcatgtc
      481 gcgtccttat ttcagttcca aaactttggg ttgttgcgca gcatgggcgt gttccgcacc
      541 cgcatacact ttcagttttt taatcatggc gtaacccaaa ggacctttgg gcagcatacc
      601 ttttacagct tgttccaaag cgcggcccgg gaattgctct tgcatttcgc ggaaagtgcg
      661 ttcgtagata ccgcctggga aaccggaatg gcggaagtat tttttatctt cgaatttggc
      721 accggttaca cgcagtttgt ccgcattgat aacaatgatg taatcgccgg tatcgacgtg
      781 gggggtgtat tcaggtttgt gtttgccacg cagacggctg gcgacttcgg ccgcaacgcg
      841 acccaagact ttgtcttggg catcgatgac gaaccattcg cgcttcacct cgtggggttt
      901 cgctgaaaag gttttcatag tggaaatcca gatagatata gaaagttgta aattttaaag
      961 acaggattcg attttgtcaa tcgcattacc gcgttacgga aggattttcc ggatttcggc
     1021 agactgcata ctgctttttc gggcggggcg gcggccaatg tgaaaaaccg catcgttgcg
     1081 atgcggtttt gaatgggaat ccccgcgaga gccgtttcgg ccgaatccgc ttgaaccttg
     1141 ctgacaaggc ggctgcctcg ggtagtttcg ggtgcgtccg caaaaggacg ctcgcgccca
     1201 ctactgctcc cggcaacctt aagcgaactt attggttcaa aggaatatat gccttcgcgg
     1261 acaccgcagg gaaaaagggg ttattcctgc gccaagcggg atagtgcttt ttggcaggcg
     1321 ttgtccatat cggctatttt acgcgcaaaa tcgccgattg ccaaatcgcc gccgttcagg
     1381 gaggttttca acaggtcgtg gacgacgttg agcgtggcca taatgacgat tttttcgctg
     1441 tccgcgacgc gtccgccttc gcggatggct tcggctttgc cgttgagcat tccgactgcc
     1501 tgcaacagtg tgtctttttc ttctgccggc gtgttgacgg tcagccgggc gtgcatgact
     1561 tcgatgtgga cttgttcgat gttcatcctt taatccttat tgctgcgttt cctgccattg
     1621 ggggaggcgc gctgccagtg cgctgatttt ttccctgctc tgttcgagca ggctgcggta
     1681 tcgtgtattt tcttctgtca ggctgtcgat tttgttttgc aggtcttctt tgagtttgcc
     1741 gacttggacg agcagggctt cgctgagttc gtcgacggcg gtttcgtgtt cgagtttttg
     1801 ccgctcgtgc gcccgtttga gttcggcgac ggtttctttg aggcggcggt tttcgctgac
     1861 gagggtttcg aatttttgta ccagcgtata aacgctgctt tcgagttttt cgatattttg
     1921 tttcataacc ttacctgtcc gtatgccgtc tgaaggcctc agacggcatc tgtctgttgt
     1981 ttattcgaaa cgcgcgctgc gttccatcag tctttcgacg acctgctgag gggtcatttc
     2041 tttgcggatg agttgcagca gggtttgggt aatcggcatg tcgatttggt acttacaggc
     2101 agtattgaag acttcttcta tcgtgctgac cccttcggaa acgtgtccga tttcgaccag
     2161 cacctgatgc agttccttgc cttctgccaa acccaagccg acgcggcggt tgcgtgagag
     2221 tgcgccggtg caggtcaaga tgaggtcgcc gatgccagca agccccatca tggttttggg
     2281 ctgtgcgccc attgcggagg caaggcgggt gatttcggcc agtccgcgtg taaccagtgc
     2341 ggcacgggcg ttaagcccgt actccagacc gtcggacaat ccggtggcaa tcgccatgac
     2401 gtttttgact gcaccgccga ctgccacgcc gataacgtcg gtactgccgt aaagcctcat
     2461 gacggtcgtg ttgagctgcg gtacgagttc ttcaatccac tcttggtttt cggaggcgag
     2521 gacgacggcg cagggcagtt gtttggcgag ttcctgtgca aaactcggac cggaaagtac
     2581 gccgattttt ttattgtcgg gcaatacttc tttcaatact tgaaaggtca gcagccctgt
     2641 atcctgctcg aatcctttgc aggcggcgag gacggggagg tgtcccgcgc cgtactgttt
     2701 gagcaactct gcgctgcttc tcaatccggc aacggaggtt acgataagga caagtccgct
     2761 gtctttgagc gcgtctgcca aatccgcaca cacttccaag gtttcgggaa aggaaaagcc
     2821 gggcagtccg cgtttgtttt cacgttcttc ctgcatttgg cggacttggt ctgcgttgcg
     2881 cgtccacagg gatacgcggt tgccgtgttg ggaaaaatgc agggcgagcg ccgtacccca
     2941 cgaacctgcg ccgataacgg taattttcat tggtcgtctt tcaacatatc actgccgttc
     3001 actttaaaac aatcggtgtt tctctgcaag tgcggtcagg gaaatgccgt ctgaaaggcg
     3061 ttcagacggc attttgcccc gatgcggcac tatcagcctg tattgcgcaa accttgcgcc
     3121 acgccgttga tggtcaggtg caccatcaga agggcgtgcg gattgtcggg ttctttacgc
     3181 aggcgtttga gcatggcgac ttgcaggccg ttgagggcgt tcaaatatgg aatcctcaag
     3241 gcaagcgaac gggcgaggct gcggttgtcg cgcaggagct cttcggtttg cagcaagtcg
     3301 agcagtgctt tgcggctgcg ttggtattct tccttgatca tgccgaagat gacttttgct
     3361 ttgtcgggtg attcgctcaa gccggcatag ttttccgcca aggtgatgtc ggttttcgcc
     3421 atcacttgtt ccatattgga gagcatggct tggaagaacg ggttgctttg ggcgtgttcg
     3481 cgcagggcgg cgagcgtttc gggtttgtct tcgcacaagg tttccaccgc gctgccgaaa
     3541 ccgtaccaag caggcagcat gaggcggttt tgcatccagg aaaataccca cggaatcgcg
     3601 cgcaagtctt gaatccgcgc taaggtcttg cggctggcgg gacggctgcc gaggttgagg
     3661 gtggcgattt cctgaatcgg gctggtttgc aggaagtagt cgatgaagtc ggggtgggta
     3721 atcagttcgc ggtagtattt gaacgatacg tccgacaatg cctgcatcag tttggcatca
     3781 gggtcttttt tatccggcag gatgctggct tccaaagtcg cggcaaccaa ggtttccaag
     3841 ttgcgttggg cattgccggg gtcggcgtat ttggcggtaa tgacttcgcc ttgttcggtg
     3901 atgcggattt gtcccgccac gctgcccgcc ggttgggcga gaatggcttg gtaagaaggg
     3961 ccgccgccgc gtccgacgct gccgccgcga ccgtggaaca ggcgcatgcg gacatcgtat
     4021 tttttgaaga gttcgaccaa gcccaattcc gcctgataga ggcaccatga gctggtaacg
     4081 tagccgccgt ccttgttgga gtcggaatag ccgagcataa tttcttggat attgccgcgg
     4141 ctttcgagca gggcatcgta ccagtcgagg cggaacatgg tttccatgac cggacaggcg
     4201 ttttccaacg cttcaatggt ttcaaacagc ggcacgatat tgatgcggct gcgcggtttg
     4261 ccgttttcca ccgccaacag gccgctttct ttcagcagca atgccaaggc gagcaggtcg
     4321 ctgggttgtt cgcagttgga aataatgctt tgtgttacgg catcttcgcc aaattcgtct
     4381 ttgattttgc gcgcttcgtt gaaaattgcc agttcgtggc gggtatggtc gctgtatgtg
     4441 ataaacgggc tgtacagcgg acgttgatgg ctcaattctc gcaacaggac ggcttgtttt
     4501 tgttcttcgt tcaggctgtt gtagtcttcc aagcctgcgt gttggaaaag ctcggtaacc
     4561 acatcggcgt gtttgcctgc gtgttggcgc aaatcaagcg gcatcatatg gaagccgaac
     4621 acggatacgg agcggatgag gtctgccaga cggccttcgg caagcaggcg gctgccgttg
     4681 tcgataaggg aacgttgcaa ttttttcaaa tcatcgagaa attcttgtgc cgaagcataa
     4741 ggctcgagga agccgaattt gcagcccatg cccaaaccga gtgagcgtgc cttgcccata
     4801 gcgcgtgcca tgatgtaggc gatggcgcgg cggtagggtt cttcggtacg ggcgatttct
     4861 tcgtcaggcg agagggcggc cagtgccatt acgtcgtcgt tgactttgac gcggcggatg
     4921 gagagcggca gttcgcggta aagtttgtcg agttcgccac ggtaaaaacg gaacacggca
     4981 tcggcgtggc ggcggaaggc aaaacgcaag gtttcggcag aaacgaacgg attgccgtcg
     5041 cggtcgccgc caatccagcc gccgattttg aggatattcg gaacgcagac atcgggatag
     5101 accatctgaa agtcgtgttc catcttgcgg tagagcttgg gcagggcttc gaaaaagctc
     5161 atcgggaaga tggacacgcc gttgttgatt tcgtcgttga cgctgagttt gtggcggcgc
     5221 gtttcgctgg tctgccacaa gcccagcagg atagtgtcga tttcgcggcg cagccgtgcc
     5281 agcgcgtcgg cattggtgca gcgttcgcgt tgcggcaaca gtgcgcggat gcggcggttg
     5341 aagcttaaga cggtttggcg ttgcacttcg gtcgggtgcg cggtcaaaac ggcggtaacg
     5401 gacgtattgt ccaactgccg ctgcaccgat ttgccgtcgg ctttccccgc tttgagcctg
     5461 cggacggttt ccgtcaggct gccttccgcg ccgccgcgtc cggcttcttc gtggatttgg
     5521 cggcggcgtt cgtggtgcac gtcttcggcg atgttcaaaa tctgtgcgaa caggccgcag
     5581 gccaaggtta aatcgtgggt ttgttgttcg tccaattgcg gcaatacttt ttcaatcaat
     5641 gccgcgctgt cgtcggaagt ggacaagagt ttgaccgttt cgacaaccaa tggcgaggct
     5701 tcttcgtgca ggaggttgaa cagggattgt ttcagaaatt ccgcgtccgc cgccaaagcc
     5761 gcgtcctttg gattgttcag aatatgcagt tgcatgattt ttctctcatt gccgtaaata
     5821 ctgtaaatgt acctcaaatg ccgcatccgt gccaaaccgt tcacacttta accgcccgtg
     5881 tcccgaaatg ccgtctgaag ttgaacgccg cccgacggca gcgttacaat cgcccacaac
     5941 tgttttttcc gaacatcatc atgaccacga ccgaacacga caacgacgat gcattcctgc
     6001 tgcggtacag ccgccacatc ctcttggacg aaattggcat cgaagggcag cagaaacttt
     6061 ccgccgcgca tattttggtc gtcggctgcg gcggtttggg tgccgccgcc ctgccctatc
     6121 tcgccgcttc cggcatcggc acgctgacca tagccgattc cgacacggtc gagctgcaca
     6181 acctgcaacg ccaagtcgca tttgacgagg gcgatgtcgg caagcccaaa gccgaagcct
     6241 tggcagaccg cctgaaacgc atcaaccata acgtcgatgt ccgcaccgtc aacgaaaaac
     6301 tcgacggctg ccgcctgacc ggtttggttc aaaccgccga catcgtttta gactgctgcg
     6361 acaactacgc cacgcgccaa gccgtcaacc gtgtctgcgt acaaacgaaa acaccgctgg
     6421 tttcaggagc agcggtgcgc tttgaagggc aacttgccgt gtaccgtccc gacttgcccg
     6481 actcgccgtg ttacgcctgc ctgtttgacg gcggatcggc ttcagacggc atctgttccc
     6541 tcttcggcgt gttctcgccg ctggtcggca tcatcggcag tacccaagcg gcggaggctc
     6601 tgaaaatcct gctggatgcg ggcgaaccgt cgcacggcag gctggcggtt taccgtgcct
     6661 tggaaggggg ctggcaatat ttcgacctgc cgcgcaaccc cgaatgcccg atttgcggcg
     6721 cggaacggta aaaccctgcc gccgtttcag acggtatcca aacggatgcg gcggaacggt
     6781 tttaaaaatt taaaaattta catttctttg caaaaaaaaa taaacttacc ttataattgc
     6841 agttgtttta gcaatgtctg tttcgcagac tcattgagta agacgttttc cccgtaatgt
     6901 gtttggccgt ctgtcccctt tgggttcgga cggctttttt taggctgtgt ttgaataccc
     6961 ggttggtttc gtctgtttgc aggggaaaac cgcttatttc cgttcgggcg gaaaacggtt
     7021 ccatcggata aaaggcattt tgtccgactg attaaagtta catcttaggt ttgcatcggc
     7081 aaaatattca aacacagcct tttttaagga aatccggata cggcggcaca tcaataatgc
     7141 ggcggaatct cgtcgcgcag ggaatacggc tcttgcgtgt cgggattcct gtcctgcatt
     7201 ttttgataca gcagcctcaa ctgagcctgc tgcaaatcca gcgtctgccg caattccgcc
     7261 accatcgcgt tcaggccggc gattacgtcc tcctgaagcg cggattggat ttccagctct
     7321 gtgatgcggt gttccaactc ttgaaccgcg tccatttaca gcaccatcgc ggcaatccag
     7381 ccggcaatca gcagcgggat attgtagtgg atgaaggtcg ggataacgga atcgcggatg
     7441 tggtcgtgct gcccgtcggc gttcagcccc atcgtcgggc ccagcgtgga atcggacgca
     7501 ggcgaaccgg catcgcccaa cgcccccgcc gtgccgacaa tggcgacggt ggcaagcggc
     7561 gaaaaaccca aaccgacaca caaaggcaca taaatcgcgg caataatcgg caaagtggaa
     7621 aaggacgaac cgatgcccat cgttaccaaa agccccacca ccagcatcgc caatgccgcc
     7681 atacctttgc tgttgccgaa tatcgccata ctgctttcca ccagcggctg gatatgcccg
     7741 gtcgcattca tcacggcggc aaaaccctgc gcggcaatca taatgaagcc gaccatcgcc
     7801 atcatcttga taccttcgcc gaatacgtcg tttgccttgt cgcggttgat gacccccaac
     7861 atcataaata cggcgaaacc gagcatcgcg cccaacacca gcgagtcttc atacatcaac
     7921 tggatggcaa aacatacggc aatggcggcg gcggcggcca ggctgcggta ggcggacggc
     7981 tgcggacggt ttgccgcatc ggcgttgccc gccgtatcgg cattgttgct ttggtacagg
     8041 cgcggtttgc ggtaatggac aaacgccagc aggagtccgg ccagcattcc caacgcggga
     8101 atcgccattg ccgccatcac gttaatgttt ttcacatcaa gctgcggcgc ggcggaatgg
     8161 atgttgccca acaggatttc gttcaaaaaa atcgcgccga agccgtaagg caggaacata
     8221 taagtcgtaa ccagcccgaa agtgatgacg cacacaatca ggcggcggtc gattttcagg
     8281 cggttgaaca ccaaaagcag cggcggaaca atcatcggga taaaggcaat gtggatgggg
     8341 atgatgttct gactcatcat gcccatcaca aggatgatgg aaagcagcag ccatttgacc
     8401 gcgccctcgc ccgaacgcac gctgtcgggc ataccgcccc ggttcagttt gcggacgacc
     8461 gcgccggcaa gctgctgcgg caggccggaa tgggtaatcg ccatcgcaaa cgcaccgagc
     8521 atcgcataag aaagcgcaat cttcgcgccg ccttccaaac ctttgttgaa cacggggata
     8581 atccccgcct gactgacctg tcccgccgca tcggcaatgt tttgcagcgg catacccgcc
     8641 accgcgccgc cgacaaacgc gccgaccgtc aggctcaata ccacgtgcac gcgcgacagc
     8701 gacagcacca gcataacgat tacggcaact acgactgcat tcattgttta tcgctccaaa
     8761 cctataaatg tttacatatc gaaacacatc ataacccaat aacggaaaac ccgccaattt
     8821 tgcaaacaat tatttcaaat gcttcatata cttccccagc gtaaccctgt ccaaacccgc
     8881 caagtccggc agggtttcca ctcccgaaaa accattctcc gccaacacgc cgcgcaccgc
     8941 cgcgccctga tcgaaaccgt gttccagcaa taaaaaaccg ccttccgcca aacggtcggg
     9001 cgcgccttgc gccaaggtac ggatgcagct taggccgtct gaaaagtcgg tcagcgcgat
     9061 ttgcggctca aaccgcaaat cgccttgcga caaatgttta tcgccgtttt cgatataggg
     9121 cgggttggac acgatgatgt cccatttccc ttcagacggc atatcggtgt cgaaccacga
     9181 accgtgtgca aattcgaccc gcgcgcccaa atccgccgca tttttccgcg ccgtttcaag
     9241 ggcgggcggg ctgatgtcgg atgcgcgcac aaacgcatcg gggcgttcga gcgcgacggt
     9301 tacggcaacc gcgccgctgc ccgtccccaa atcccacacg cgcccgtttt cgggcaggcg
     9361 cgccaatacg gcttcgacca agtgttcggt ttcggggcgc ggaatcagca cgctcggatt
     9421 gactgtaaag cgtctgccat aaaattcgcg cacacctaaa atataggcaa ccggctcgcc
     9481 gttcagacgg cgttgcgcca gcctgtccgc ccgctgtcgg acttcgtccg gcatttcttc
     9541 cccgccccgc gtcaacaact gcacgcgcgt atattccgaa acatattgca gcagcattct
     9601 tgcttcattt ttaggcagtt ttgacaagcc caaccattta tcaaacgtca tttttatccc
     9661 gtctgccgct gatgcggctt ttctttcctt attctttccg gcaaacgtac cgatggtggc
     9721 aaccgcaaat gcggcatacc acaaataaaa tcctgcaccg tagcgcacaa tatccgatgt
     9781 attccctgct tcatcgacgt atacggcttt cacactgaaa gccaccaacg ccaagcccca
     9841 aagtgccgca tggacaggca cgaccttctt ccgcaacgcc agcaaaacaa tggccgccaa
     9901 ccaaacataa ttcgcataga ccgcacaata cctgatatcc aaagaagcaa atatcgaccc
     9961 caaaatcaaa acggtcaaac cctccatgct tccatgattg cccaaataaa atgcaacatt
    10021 ggataaagac gctatccaca gggcaaccga caccagcaac atcactatgg gaaaacttga
    10081 tttccgattc tgttcctgca tggttttatc ctaatgtaaa aggccgcctg aaaacctttc
    10141 agacggcatc gtgccggatt ccgcgtcaga ttgcgctgcc gccgacggtc agcccggcat
    10201 cgatacgcag ggtcggctgc cccacgccga cggggacgct ctgcccttct ttgccgcaca
    10261 cgccgacacc gctgtccaac gcggtatcgt tgcctatcat cgaaacgtgt ttcagcactt
    10321 cgggcccgtt gccgataatg gtcgcgcctt tgacggggta ttgcagcctg ccgccttcca
    10381 cccaccatgc ttcggacgcg ctgaacacaa atttgccgct ggtaatgtcc acctgtccgc
    10441 cgccaaagtt gacggcgtaa atgcctttgt cgatggacgc gatgatttct tccggctcat
    10501 agctgccatt ttccataaag gtattggtca tgcgcggcat cgggacggag gcgtagcttt
    10561 cgcggcggcc gttgccggtg gattgcgtac ccgtcaggcg ggcattggtt tcgtcctgca
    10621 tatagccgac taaaatgccg tcttcaatca atacggtgcg gcgggtttcg ttgccttcgt
    10681 cgtcgatgtt gagcgaaccg cgccggccgg caatatcgcc ctgatcgacg acggtaacgc
    10741 ctttggcggc gacgcgctcg cctattctgc cggaaaagac gctggtcccc ttgcggttga
    10801 aatcgccttc caaaccgtgt ccgaccgctt cgtgcagcaa cacgcccggc cagccgttgc
    10861 ccaaaacgac ggtcatttcg ccggcgggcg cggggcggga ttcgaggttg gtgagtgcct
    10921 gtttgacggc ggcatcgaca aactgccgca ccaagttttc atcgaaataa gccaagtcgt
    10981 agcgtccgcc gccgcccgcg ctgccctgtt cgcggcgttc gccctgtttg gcgatgacgg
    11041 taacgttcag gcgcaccatc gggcggatgt cggcggcgtg tttgccgtcc agacgggcga
    11101 ggtaaaccat atcgtattcg caggtcaaac cggccatcac ttgcacgatg cgcggatcgg
    11161 cggctttggc gattgcttcc actttgttca acagcgcgac tttggcggcg gaatcgaggc
    11221 cggcaatggg gtcggacgcg gaacaaaccg gcttgccgcg cgtttcagac ggcattttgg
    11281 cggacacctt gccgcctgcc gccccaatcg cgcggacggc gcgggcggaa cggtttatcg
    11341 aatcgatgca caggctgtcg gcgtaggcaa aggcggtttt atcgcccgaa acggcgcgca
    11401 cgcccacgcc ctgattgatt tggaagctgc ccgatttgac gatgccctct tccaaatgcc
    11461 agctttcata agcggtgcgc tggcagtaga tgtcggcgta atcgacgtgg tgcgcgccga
    11521 tgatgcacag gcttttggcg agcagttcgg gggaaaggcg gttggcttcg agcagccgcg
    11581 cctgtacggc ggaataggtc ggatgcatag tgtcggcgca taaaaaatca ggggcttgat
    11641 tatacggcat ttgttatata gtggattaac aaaaaacagt acggtgttgc ctcgccttgc
    11701 cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt aatccactat
    11761 agaaatgcgc cgtgccgcct gaaatgtaag atttttgcca acgccccctg cttttgtgta
    11821 cacttaaagc tccttgtcgg agtgccgccg ccgggcggct gagattgcga aagcagaatc
    11881 cgtagaacct gtcggggtaa tgcctgcgta ggaaacaaac cgtcaaatgc cttatcaggc
    11941 ttccgttccc ttttccgcac ttccccgccc accttccttc tttttaaagg acgtcatatg
    12001 tcgggcaatg cctcctctcc ttcatcttcc gccgccatcg ggctgatttg gttcggcgcg
    12061 gcggtctcga ttgccgaaat cagcacgggt acgctgcttg cgcctttggg ctggcaacgc
    12121 ggtctggcgg ctctactttt gggtcatgcc gtcggcggcg cgctgttttt tgcggcggcg
    12181 tatatcggcg cactgaccgg acgcagctcg atggaaagcg tgcgcctgtc gttcggcaaa
    12241 cgcggttcag tgctgttttc cgtggcgaat atgctgcaac tggccggctg gacggcggtg
    12301 atgatttacg ccggcgcaac ggtcagctcc gctttgggca aagtgttgtg ggacggcgaa
    12361 tcttttgtct ggtgggcatt ggcaaacggc gcgctgattg tgctgtggct ggttttcggc
    12421 gcacgcaaaa caggcgggct gaaaaccgtt tcgatgctgc tgatgctgtt ggcggttctg
    12481 tggctgagtg ccgaagtctt ttccacggca ggcagcaccg ccgcacaggt ttcagacggc
    12541 atgagtttcg gaacggcagt cgaattgtcc gccgtcatgc cgctttcctg gctgccgctg
    12601 gccgccgact acacacgcca agcacgccgc ccgtttgcgg caaccctgac ggcaacgctc
    12661 gcctatacgc tgacgggctg ctggatgtat gccttgggtt tggcagcggc gttgttcacc
    12721 ggagaaaccg acgtggcaaa aatcctgctg ggcgcaggtt tgggtgcggc aggcattttg
    12781 gcggtcgtcc tgtcgaccgt taccaccact tttctcgatg cctactccgc cggcgtaagt
    12841 gccaacaata tttccgccaa actttcggaa acacccatcg ccgttgccgt cgccgttgtc
    12901 ggcacactgc ttgccgtcct cctgcccgtt accgaatatg aaaacttcct gctgcttatc
    12961 ggctcggtat ttgcgccgat ggcggcggtt ttgattgccg actttttcgt cttgaaacgg
    13021 cgtgaggaga ttgaaggctt tgactttgcc ggactggttc tgtggctggc gggcttcatc
    13081 ctctaccgct tcctgctctc gtccggctgg gaaagcagca tcggtctgac cgcccccgta
    13141 atgtctgccg ttgccattgc caccgtatcg gtacgccttt tctttaaaaa aacccaatct
    13201 ttacaaagga acccgtcatg acccgtatcg ccatcctcgg cggcggcctc tcgggaaggc
    13261 tgaccgcact gcagcttgca gaacaaggtt atcagattgc acttttcgat aaaggctgcc
    13321 gccggggcga acacgccgcc gcctatgttg ccgccgccat gctcgcgcct gcggcggaag
    13381 cggtcgaagc cacgcccgaa gtggtcaggc tgggcaggca gagcatcccg ctttggcgcg
    13441 gcatccgatg ccgtctgaac acgcacacga tgatgcagga aaacggcagc ctgattgtgt
    13501 ggcacggaca ggacaagcca ttatccagcg agttcgtccg ccatctcaaa cgcggcggcg
    13561 tagcggatga cgaaatcgtc cgttggcgcg ccgacgacat cgccgaacgc gaaccgcaac
    13621 tcggcggacg tttttcagac ggcatctacc tgccgaccga aggccagctc gacgggcggc
    13681 aaatattgtc tgcacttgcc gacgctttgg acgaactgaa cgtcccttgc cattgggaac
    13741 acgaatgtgc ccccgaagac ctgcaagccc aatacgactg gctgatcgac tgccgcggct
    13801 acggcgcaaa aaccgcgtgg aatgcttctg ccgaacacgg cagcaccctg cgcggcatac
    13861 gcggcgaagt ggcgcgggtt tacacacccg aaatcacgct caaccgcccc gtgcgtctgc
    13921 tccatccgcg ttatccgctc tacatcgccc cgaaagaaaa ccacgtcttc gtcgtcggcg
    13981 cgacccaaat cgaaagcgaa agccaagccc ctgccagcgt gcgttccggg ctggaactct
    14041 tatccgcact ctatgccgtc catcctgcct tcggcgaagc cgacatcctc gaaatcgcta
    14101 ccggcctgcg ccccacgctc aaccaccaca accccgaaat ccgttacagc ctcgcccgac
    14161 gcctgattga aatcaacggc cttttccgcc acggcttcat gatttccccc gccgtaaccg
    14221 ccgccgccgt cagattggca gtggcactgg ttgacggaaa agacgcgccc gaacgtgatg
    14281 aagaaagcgg tttggcgtat atccgaagac aagattaaag ccgtctgaaa ggaaccccat
    14341 gaccttcccg cccttgaaat ccccgctcaa attctacgcc gtcgtcccca ccgccgattg
    14401 ggtggggcgc atggtcaaag caggtgccga cacggtgcaa ctgcgctgca agaccctgca
    14461 cggcgatgaa ttgaaacgcg aaatcgcccg ctgcgtcgcc gcctgtcaag gcagccgtac
    14521 gcagcttttc atcaacgacc actggcgcga ggcaatcgaa gcaggcgcgt acggcgtgca
    14581 tctcggacaa gaagacatgg acaccgccga ccttgccgcc atcgccgccg ccggtttgcg
    14641 cttgggtttg agtacgcact ccgttgccga actcgaccgc gccctgtccg tacaccctag
    14701 ctacgtcgcc agcggcgcga ttttcccgac cacgaccaag caaatgccca ccgccccgca
    14761 aggcttggac aaactgtgcg agtatgtgaa acaggcaggc ggcacgcccg tcgtcgccat
    14821 cggcggtatc gacttgaaca acgcccgagc cgtactcgcc accggcgttt cctcactcgc
    14881 cgccgtccgc gccgtaaccg aagcggcaaa tcccgaagcg gtggttaaag cgtttcaggc
    14941 tttgtgggat ggataaaacc gaaagaagaa aattcaattt gccgtgtcgg caaaacttag
    15001 cccgttatcg caaacatact taactttaaa tgtggcatat catcaaattc cgtcatttcc
    15061 gcgcaagcgg gaatccgcct taaaacttga gaaaccatca tttgaaaaac agtttccgaa
    15121 tttcaaaaat ggattcccgc ctgcgcggga atgacggcaa ccggccggtt gcgtatcaaa
    15181 aaataaagta attcggct
//
LOCUS       DAWKOX010000031        14996 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.031, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000031 DAWKOX010000000
VERSION     DAWKOX010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14996)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14996)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14996
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.031"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..981)
                     /locus_tag="WJK78_000700"
     CDS             complement(<1..981)
                     /locus_tag="WJK78_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ7597651.1"
                     /translation="MTQLFLHSDTPNEKELISIYEKAVSEAVELYIFSAYLTHWDVKN
                     KLNSKLQEFKFIFGQDFGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKN
                     DKNEYYALIGSSNLTHAAFNSNYEANILTKISEQDFIKVKSWADEIAMKSIPVSEDWL
                     EEYQEAEINYKKSTVSQSLMDKLFMEMPNYNQELIAARRKQMRNHQTVCNQLKSLIKQ
                     CAAGKIDNDEFYVEFNKLWSWKSENKGEGVGNRFQDQTWKRTGKSSDFRKLCIAIQSV
                     FDAPLAERDNVVAKQIDWLKECGVSTRGSVFSEMLCQEYPDRYPVLNAPIK"
     gene            complement(1165..3189)
                     /gene="nuoL"
                     /locus_tag="WJK78_000701"
     CDS             complement(1165..3189)
                     /gene="nuoL"
                     /locus_tag="WJK78_000701"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ7597652.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGEEHHSLGKNDNPHESPLVVTLPLILLAIPSVIIGYLAI
                     EPMLYGDFFKDVIFVNTDAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVLSAWL
                     LYVKLPHLPAKIAQTFRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            complement(3190..4062)
                     /locus_tag="WJK78_000702"
     CDS             complement(3190..4062)
                     /locus_tag="WJK78_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEZ7597653.1"
                     /translation="MSFSIALPLVYLFIGILIGKTPFRKIKGTFSVILSRWIIPFVIV
                     YNITTYRDGMQYVMLWMIISMGLIILIGKRVDKDPVWNLCLCYLNIGWLGLPIVATLF
                     GDEAAQVLISAYVGSSLFGNSVGVGLLLNNSNFISGLKKTLKSPPVVALVIGMFGIPL
                     GHFVADYFGEVYFFSKIAMGILGMVILGIWLAEIKLNLNDLKKSIKPFLIKNILFIGI
                     VFLFIQIAAYFDLKLILENQKTLYLIPLLPPAANIIVLETAYLKTGRSASMIAYGTIF
                     SLIAISIYILLVQI"
     gene            complement(4357..4662)
                     /gene="nuoK"
                     /locus_tag="WJK78_000703"
     CDS             complement(4357..4662)
                     /gene="nuoK"
                     /locus_tag="WJK78_000703"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ7597654.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLNKLKG"
     gene            complement(4659..5330)
                     /locus_tag="WJK78_000704"
     CDS             complement(4659..5330)
                     /locus_tag="WJK78_000704"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ7597655.1"
                     /translation="MTFSAILFYILATIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTINPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            complement(5342..5821)
                     /gene="nuoI"
                     /locus_tag="WJK78_000705"
     CDS             complement(5342..5821)
                     /gene="nuoI"
                     /locus_tag="WJK78_000705"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ7597656.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            complement(5902..6978)
                     /gene="nuoH"
                     /locus_tag="WJK78_000706"
     CDS             complement(5902..6978)
                     /gene="nuoH"
                     /locus_tag="WJK78_000706"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ7597657.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            complement(6981..9242)
                     /locus_tag="WJK78_000707"
     CDS             complement(6981..9242)
                     /locus_tag="WJK78_000707"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ7597658.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGSLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFSYEGLYHESRLKK
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELLMPLLSQEAAHPDEWAGRLKNLSANAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     TEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLSSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDAIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            complement(9532..9969)
                     /locus_tag="WJK78_000708"
     CDS             complement(9532..9969)
                     /locus_tag="WJK78_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597659.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICWKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINEL"
     gene            complement(9969..11270)
                     /gene="nuoF"
                     /locus_tag="WJK78_000709"
     CDS             complement(9969..11270)
                     /gene="nuoF"
                     /locus_tag="WJK78_000709"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ7597660.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            complement(11660..12133)
                     /gene="nuoE"
                     /locus_tag="WJK78_000710"
     CDS             complement(11660..12133)
                     /gene="nuoE"
                     /locus_tag="WJK78_000710"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ7597661.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            complement(12133..13389)
                     /gene="nuoD"
                     /locus_tag="WJK78_000711"
     CDS             complement(12133..13389)
                     /gene="nuoD"
                     /locus_tag="WJK78_000711"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ7597662.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            complement(13379..13972)
                     /locus_tag="WJK78_000712"
     CDS             complement(13379..13972)
                     /locus_tag="WJK78_000712"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ7597663.1"
                     /translation="MASIQNLYETVIGVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEDLHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            complement(13985..14467)
                     /locus_tag="WJK78_000713"
     CDS             complement(13985..14467)
                     /locus_tag="WJK78_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ7597664.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            complement(14458..14814)
                     /locus_tag="WJK78_000714"
     CDS             complement(14458..14814)
                     /locus_tag="WJK78_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ7597665.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGVYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
BASE COUNT         3894 a         3808 c         3583 g         3711 t
ORIGIN      
        1 tttaatagga gcgtttaaca ctggatatct atctggatat tcttgacaaa gcatttcaga
       61 aaaaactgaa ccacgagtgg aaactccaca ttcttttagc caatcaattt gcttggcaac
      121 aacattatct ctctcagcaa gtggtgcatc aaaaactgat tggatagcaa tgcataattt
      181 tctaaaatct gaagactttc cggtcctttt ccacgtttga tcttgaaatc gattacctac
      241 cccttctcct ttattttcgc ttttccaaga ccataattta ttaaattcca cataaaactc
      301 atcattgtct atctttcctg cagcacattg cttaataaga ctttttaatt gattacacac
      361 agtttgatgg tttctcatct gttttctccg tgctgcaatc agttcttgat tataatttgg
      421 catttccata aataacttat ccatcaatga ttggctaaca gttgatttct tataattaat
      481 ttcagcttcc tgatactcct caagccaatc ttccgatact gggatagatt tcatcgcaat
      541 ttcatcagcc caagatttga cttttataaa atcctgctcg gaaattttag tcaaaatatt
      601 tgcttcataa ttgctattaa acgcagcatg agtcaaattt gaagaaccga ttaaagcata
      661 atattcattc ttatcattct tccaaaatac agctttagga tgaaaaccct gaatgccttg
      721 agctaccatc agtgtgaatt tcaaatggga cggaagccat ttcaacactt tccgaatagc
      781 ctctttttta gacaatccga aatcttgtcc aaaaataaat ttaaactctt gcaatttgct
      841 attgagctta ttttttacat cccaatgagt gagatacgca gagaaaatat acagctctac
      901 tgcctctgaa acagctttct catatattga aatcagttcc ttctcatttg gtgtatctga
      961 atgtaaaaat aactgtgtca tcccttttga ctcctctata tttgttgaga ttgcctaaaa
     1021 aatttaggaa acagataatt tgcatgttgg ctatttcacg cctgttgggt accattttgt
     1081 tccacccttt gacttaatgc ccacttctca aacttttcag acgacctcta caaaactatg
     1141 aacaggtcgt ctgaaactcc gcctttatct gaacaatccc cagaaggtca tgccgagcag
     1201 taccaatacg ccgaatacca tagcggcggc gtaggtgtag ataaagccgg tttgggcttt
     1261 acgcacttgc gcggcaatcg cgccgaccag tttggcagag ccgttgacga tgccgttatc
     1321 gataatggcg gtatcgccga ctttccagaa gaaggtaccc aatgcgcgtg tgcctttggc
     1381 gaaaacgttg aaatacaggg cgtcgaggta gtatttgttt tcaaacaaaa cgtaaatcgg
     1441 acggaacgtc tgtgcaattt tcgctggcag gtgcggcagt ttgacgtaca aaagccatgc
     1501 gctcaacacg cctgcgatag caaggtagag tacgggcgaa tgcaggctgt gcgacaccat
     1561 tgccaatgcg ccgtggaact cttccttcat gatgtgcatg gtcggatgcg cgtcggtatt
     1621 gacgaaaatc acatctttga agaaatcgcc gtaaagcata ggctcgatgg caaggtagcc
     1681 gatgatgacg gacggaatgg caagcaaaat caaaggcagg gtaacaacca acgggctttc
     1741 gtgcggattg tcgtttttgc ccaagctgtg atgttcttcg ccatgatgat cgtcatgatg
     1801 ttcaggcaag ctgcgccatt tctcttcgcc gtggaacacc ataaagtatt ggcggaatgc
     1861 gtagaacgca gtaacaaaaa cgctggcgag gacggcaaaa taggcaaagc cgctgcccgg
     1921 cagggtgctg tatttcgccg cttcgataat cgaatctttg gaatagaagc cggagaagaa
     1981 cggcgtaccg atcagcgaca agttaccgat cagcatggtc agccaagtaa tcggcatgta
     2041 ttttttcaga ttgcccatgt ggcgcatatc ttggtcatgg tgcataccga taatcgcgct
     2101 gcccgccgcc aagaacagca aggctttaaa gaaggcgtgg gtcatcacat ggaacatcgc
     2161 cacggaatag gcagacgcgc ccagagccac ggtcatgtag cccagttgcg acagggtgga
     2221 atacgcaacc acacgtttga tgtcgttttg aatcacgccc aagaaaccca taaacagagc
     2281 agtaatcgca ccgattacca tgatgacaga cagcgcagtg ctgctcatct cataaatcgg
     2341 cgacatacgc gataccatga acagaccggc ggtaaccatg gttgcggcgt gaatcaatgc
     2401 ggaaatcggg gtcgggcctt ccatcgaatc gggcagccag acatgcagcg ggaattgtgc
     2461 cgatttaccc atcgcaccga caaacagaag taaacaagtt acggtaatca aagaccattc
     2521 cacgccgggg aaaagctgga tggtggcatt ttggacgttg ggcagatagg cgaatacgtc
     2581 ctgatagcgc aggctgccgc cgaaataggc aagcaccaag ccgataccga gcaaaaagcc
     2641 gaagtcgccg acacggttga tcaaaaaggc tttcaggttg gcaaatgtcg cgctcgggcg
     2701 tttgaaatag aaaccgatca agagatacga caccaaaccc accgcttccc aaccgaagaa
     2761 gagctggatg aagttgttgc tcataatcag catcaacatg ctgaatgtaa acaaagaaat
     2821 gtagctgaag aagcgttggt agccgacttt ttcgtcgtgc atatagccga tggtgtagat
     2881 atgcaccatc aacgacacgc ccgttaccac gaccatcatc atcgccgtca tcgtatcaac
     2941 caagaagccg acggaaaaat ccaagccgcc cattgtcagc caggtataga cgttttcgtc
     3001 aaacttggca cggctgccat tgaggaatcc ccacagcaca taagccgaca gcacggcgga
     3061 cacagccacg ccgagtatcg taaccgtatg cgcgccggca cgtccgattt tgttgccgaa
     3121 caaacccgca atcagcgagc ctgccaaagg cacgagggcg atgatgagat ataaagtcat
     3181 gtcgttcatt taaatttgca ccagtaaaat ataaatgctg attgcgatta aactaaaaat
     3241 cgtaccatac gcaatcatag aagccgaacg ccctgttttc aaatatgccg tttccaacac
     3301 aataatattg gcagcaggcg gcagcaacgg tattaaatac aatgtttttt ggttttcaag
     3361 aatcaacttc aagtcaaaat atgcagctat ttggataaaa agaaaaacaa tccctataaa
     3421 taaaatgttt tttattagaa acggtttaat acttttcttc aaatcattca aatttagttt
     3481 tatctcagcc agccaaatac cgagtatcac catccccaat attcccattg ctattttcga
     3541 gaaaaaataa acttccccaa aataatctgc tacaaaatgc cctagcggaa taccgaacat
     3601 tcctattacc aatgcaacaa cgggagggga ttttaaagtc tttttcaatc cggatatgaa
     3661 attactatta ttcaataaca acccgacccc gaccgaattt ccgaataaag aacttcccac
     3721 gtatgccgaa ataagcactt gcgccgcctc atctccaaac aaggttgcaa ctatgggaag
     3781 ccccaaccat ccgatgttca aatagcacaa acacaaattc caaacaggat ctttatcaac
     3841 tcttttcccg attaggataa tcaaccccat cgaaataatc atccataaca taacatactg
     3901 cataccatca cgatatgtcg ttatgttata gacaataaca aaagggataa tccatctgct
     3961 caatattaca gaaaaagtgc ctttaatttt tctaaaaggg gttttcccaa tcaaaatgcc
     4021 aataaacaga tataccaatg gaagagcaat tgaaaatgac ataatcactc tccactttct
     4081 gaaattctaa aattttcaaa aacccattgt tttacccaat tacccgccat acagcccaat
     4141 ggctgccaat gagcccttga aattgtaaac attctctttc actcatacta atccacaatt
     4201 tatgcatata tgggcgtgtg gagaccaaag tgccttgata tggcaaacaa gagtttttac
     4261 ctgtaactgt ttgattaagc taactcctgc tgcacctaat ccaacagcag caatatcaaa
     4321 cattatctat ctcctttttt ctttaaaaat tccaaatcaa cctttaagtt tgttcaaatc
     4381 ggcaacgttg attgtttgtc ggttgcggta caccaatacc ataatcgcca aaccgatggc
     4441 agattcggca gcggcaacgg tcagtacgaa gaatacgaaa atctgtccgg cggtatcgcc
     4501 caaatgttgc gagaaggcga taaagttgaa gttcaccgcc aaaagcatca gctcgatgga
     4561 catcagcaag accagcacgt ttttgcggtt cataaagatg cccatcgcgc tgataccgaa
     4621 caggagcgcg cccaatacca gataatgcgt caaggtaatc atgctttgcc ctccccttcc
     4681 ggcttgagac cgtctgaaac ttcgctttct tcggcagatt cgacttgcgg tttgaccgct
     4741 tccattttca ccagacgcat acggccttgg tcggcgcgta ctttaacctg gtcggcagga
     4801 tccatacgtt tcggattgat ggttttacgg tgaaccagcg caatcgccgc caccataccc
     4861 aacaacagca ataccgccgc caattcaaac ggcaacagat agtcggtata aatacggctg
     4921 cccaaatcgc ggatattgtt gtaatcggca ggaatgtctt tcatcagacc aaatgcggca
     4981 aggtcggttt tcgggttgac cagaatcagg atcagcgcaa ccgccaacaa tgtgccgacc
     5041 acaccggcaa caggcgcgtg ccgccagaaa ccggcacgca tttcttcaat gtcgatgttc
     5101 aacatcatca cgacgaacag gaacaacacc atcacggcgc cgacgtaaac caccaccagc
     5161 gtcacgccca aaaactcagc ctgcatcagc atccaaagca tcgcgctcac gcagaaggtc
     5221 agcaccagat gcaaagcggc gtggacaggg tttttagcgg taacggtacg cagcgcgccg
     5281 tataagacga tggtggcaag gatatagaac agaatcgcgg aaaaagtcat tcgtctgctc
     5341 cttaacggta cggcgcgtca gcggctttgc gtttggcgat ttcggcttcg tatttgtcgc
     5401 cgattgccaa gaggatcggc ttggtcatgt gcaagtcgcc ttttttctcg ccgtggtatt
     5461 caaaaatatg cgtttccaca atcgcatcgg ttgggcaggc ctcttcgcag aagccgcaga
     5521 agatgcactt ggtcaggtcg atgtcgtaac gcttggtgcg gcgggtgccg tcttcgcgtt
     5581 cttccgattc gatattgatc gccattgccg gacacaccgc ctcgcacaac ttacacgcaa
     5641 tgcagcgttc ctcaccgttc ggataccgcc gctgcgcgtg caggccgcgg aaacgcacgg
     5701 attgcggcgt tttctcttcg ggaaaataaa tcgtgtcttt gcgggcgaaa aagtttttga
     5761 gcgttacgcc catacctttt accaattcgc caagcagaaa ggtttttact aagttagcca
     5821 tattatgttc cctcaaaaca gggatttcgt taggtattca aaatcgcttt gttcagacgg
     5881 cctcaagatg ccgtctgaaa cttatttcca caaattcagc ggtgaaatca tccacacgcc
     5941 caaaaccacg atgtaggcga agccgatcgg aatcagcact ttccagccca aacgcatgat
     6001 ttggtcgtaa cggtagcgcg ggaaggttgc acggatccac aggtaccagt acaacaccgc
     6061 cgccattttc acgaacatcc agaatgcgga aggtgtgccg ataaagcccc aactttgcgg
     6121 gaacggggac aaccagccgc cgaggaacat cagcgatgtc agcgcggcaa tcagaatcat
     6181 gaaaatgtat tcggcaagga agaacagcgc gaacgcgaag ccggaatatt cgacgtggtg
     6241 accggcaacg atttcagact caccctctgc cacgtcaaac ggcgcacggt tggtttcggc
     6301 aacggcggaa atcagataaa cgatgaagat ggggaagagc ggcagccagt tccacgagaa
     6361 cacggaaccg cccgcgatgc ctttggcttg tgcggcaacg atgtcggaga agttcatgct
     6421 gcccgatacc atcacaacgc acaccagcgc ggcactcatg gcaatctcgt aggaaatgct
     6481 ttgtgcggaa gcacgcattg cacccaagaa cgaatatttg gagttggaag cccagcccgc
     6541 gatgatcacg ccgtaaaccg acagcgaggt aatcatcagg atgtacaaaa ggccgatatt
     6601 gatgttggtc agcacccatt cttcgttgaa cggaatcact gcccatgctg cgaaagacgg
     6661 agcaagcgac ataatcgggc cgatgtagaa cagggctttg tttgacagct tcggacgggt
     6721 tacctcttta aacaagagtt tgaacacgtc ggcaaacggc tgaatcagac cccacgggcc
     6781 ggttacgttc ggaccgacgc gaagctgcat gaagccgatg actttacgtt cgaaatacgt
     6841 caggtaggca acggtcagaa tcagcggaat caggataatc acgattttga cgatgacgga
     6901 taccaccaag cctacggtga tgcccaaatc gcccagaccg agcgttgcgg caaagaggtt
     6961 ttggaaccat tcttgcatga tcaagctccc gccagttcaa tagtgtccat caacgcaccc
     7021 agcgcggcat tttcggtatg cagcggcaga tgcaccacgt tttcaggcaa accggcatcg
     7081 gctttgacag caaccgatac gcttgcgccg ttttgtttgg cgacagcggt ttgtccgtct
     7141 tgcaggccca agcgtgccaa tgtgttcgga tttacacgcg cggcaggcac ggcggcatgg
     7201 ctggtttctt gcaacggtgc ggaacggcgt acgatggcat cggtgtgata aataccgacg
     7261 ccgccgacac ggacgaggcg gtctgatgcc gtctgaacgc cctcccctgt ccatgtactg
     7321 cggttgtcca gtttggacga caggctttct gcatccagcg cgtctttcaa aatcgcagcg
     7381 gtatcgtggt attcaaaacc tttcaggtca aacagattgc ccaatacgcg caacactttc
     7441 cacatcggac gcgaatcgcc gaagccttgt accacgccgt ggaaagattg cagacggcct
     7501 tccatattga tgaagctgcc tgaggtttcg gtaaacggcg caatcggcaa caacacgtcg
     7561 cacacgtcca gcagcgtttc gctgacaaac ggtgtaaacg ccatcacgct ttttgcctgt
     7621 ttcaacgcgg ctacggcttt tgcaccgtca accgtatcaa tttcaggctc gacgttgagc
     7681 agcaagactg cctgtttcgg cgcgtttgcc atttcggtaa cgctctcacc tgagttcacg
     7741 cccaatacgt ccgcaccgac gctgttggcg gcttgcggca aaatacccag taccgcgccg
     7801 gttgcatccg ccagctcttg cgcggcggca taaatggcgg cgtaatcagg atggttttgc
     7861 acttccgcgc ccaaaatcac cgctgctttt tcagcgtttt tcaggctggc ggtaacggcg
     7921 tgttccgcat tggcagacag gtttttcaga cggcctgccc actcgtcggg atgtgcggct
     7981 tcttgagaga gaagcggcat caacaactct tctttactgc cggccaatac actcaacgcc
     8041 atacggtctt tggcggcgcg gcgcaggcgg gcggtcagga gcggctgttc tttgcgcagg
     8101 ttcgcaccga ctaccaatac ggcatcgttg tccgccagcg attcaatgct ttgtcccaac
     8161 cattgcgcac ctttaaggcc gtctgaaaga cgtttgtctt gttggcgcaa acgggtggca
     8221 aagtttttaa cacccaagcc gtcggcaagt tttttggcca gatacagctc ttcaaccgta
     8281 ttcatcgggt tcgcccaaat gccgacttgg ttttggttgc cgtctttggc gatacattca
     8341 atcgcgctgc ggacatattc caacgcggtt ttccaatcca cgtccatcca ctcgccgccc
     8401 tgtttgattt tcggtttttt cagacggctt tcgtgataca ggccttcgta ggaaaaacgg
     8461 tcgcggtcag acagccaaca ttcgttaatc gcttcatttt ccagcggcaa cacgcggcgg
     8521 acggtatggt ctttggtttg tacaatcagg ttgctgccca aagcgtcgtg ggcggaaacg
     8581 gatttgcggc ggttcaattc ccaagtacgc gcattgaagc ggaacggttt gctggtcagc
     8641 gcgccgacgg gacacaaatc aatgacgttg cccgacaatt cggtttccac cgttttgccg
     8701 ataaagggca tgatttcgga gtgttcgccg cgattcacca tcgcaatttc ctgcaaaccg
     8761 gcgatttctt cagtgaaacg aacgcagcgg gtgcagtgga tacagcggct catttcctcg
     8821 gcggaaacca aggaccccat atctttgccg acgacggaac gtttttcttc ggtgtagcgg
     8881 ctggtggttt ttccgtagcc caccgccaaa tcctgcaact ggcattcccc gccttggtcg
     8941 caggtcggac aatcaagcgg atggttgatg agcaggaact ccatcacgcc ttcctgcgcc
     9001 tctcgggctt ttgccgaatg cgtacgcaca atcatgccgt ctgtaaccgg cgtggcacag
     9061 gcaggcaggg gttttggggc tttttctacg ttcaccagac acatacggca gttggcggcg
     9121 atggaaagtt ttttgtggta acagaaatgc ggaatataag taccgagctt gtgcgcggct
     9181 tcaatcaccg tcgcgccctg ctccacagat acttgtttgc cgtcgatttc gatttgtaac
     9241 atggttcgtt cctagttacg ggtatttgat aaataatctt ttatggaggt cgtctgaaaa
     9301 atgggtttca gacggccttt tgagtttcat tgacaatcaa tactgtttaa aacgtttact
     9361 gccaccttgc cgtcattccc gcacaggcgg gaatccattt tttgaatttc ggcaactgct
     9421 tttcaaatat cgggttctgt aaattccact atggattccc gcctacgcgg gaatgacggc
     9481 aaagttaaat ttttagcatt ttgcttttaa ccaatataaa accaactaaa actataactc
     9541 atttattata tttttaaatg acttaaataa ctctttaaca gcacgctcat tgtcttcatc
     9601 tgtaggctca aacttttcac accaattaat tatatttaca tcgccatgca ataactctgc
     9661 ataacatcct actgcatcgc aactaccacc ccgtgtcctt gacgtgccaa aaataaaatc
     9721 acaattatgc gaataaagtt tgtataaatt tctcctaacc tcgtattcat tatcaccaga
     9781 tgaataaaaa ccaattctct gaccttcatg atcaaatact gcaacaaaat ctaagccatt
     9841 tccatgtctt tcaaaaaaga ctagaaattt agaaaatttc caacaaatct gattaaaaag
     9901 cgtattgagt gtcgtactct tacctttgtt ggctgcaccg tatagaataa aaattttagc
     9961 ttccaccatt accaccctcc ccacttatgc tctttcatcg gtccgccgtg ttcgatgtaa
    10021 tgcacaaact catcacggaa atgcttggta aagcttcgga cggggaagac ggcggcatcg
    10081 gcaagggcgc agatggtgcg gcctgccatt tggttgccga cagaatccag caaatccaaa
    10141 tcttccatgc ggcctttgcc ttctacgatg cggtggacga tgcggtaaag ccagccggtg
    10201 ccttctcggc aaggcgtaca ttggccgcaa gactcgtcgt agtagaagta gctcaggcgc
    10261 tcaagggctt tcaccatgca cacgtcttcg tccatgacga taatcgcgcc agaacccagc
    10321 atcgagcctg ctttggaaat cgagtcgtag tccatatttg tctgcatcat gatgtcggca
    10381 ggcaatacgg gcgcggacga accgccagga ataacggcct tgagtttttt gccgccgcgc
    10441 ataccgcctg ccattttcaa gacttcggca aacggtgtgc ccaatggcac ttcatagttg
    10501 cccggacgct cgacatggcc ggaaatacag aataatttgg taccgcctgc attcggaata
    10561 cctttatcgg caaatgcctg tccgccgtca cggataatga atgaaacgga ggagaaagtt
    10621 tcggtattgt tgatggtagt cggtttgccg tacaggccga acgaagcagg gaatggcggt
    10681 ttaaagcgcg gctggccttt tttgccttcc agcgattcaa gcaatgcggt ttcttcgccg
    10741 cagatgtatg caccgtagcc gtggtgggcg aagagttcga attcaaaatc cgaacccaaa
    10801 atatttttac ccaaaaagcc tgcggcacgc gcctgctcca aagcggcctc aaagcgttgg
    10861 tagccttcaa aaatttcgcc gtggatatag ttgtaaccgg ctttcgcgcc catcgcgtaa
    10921 ccggcgataa tcatgccttc aatcagggca tgggggttga acataataat gtcgcggtct
    10981 ttaaatgtac ccggctcgcc ttcgtcggtg ttgcaaacga cgtacttttc gccggggaaa
    11041 gaacggggca taaagctcca tttcaaaccg gtcgggaagc ccgcaccgcc acgaccgcgc
    11101 aagccggagg ttttgacttc gtcaatcaca tcggtttgcg agatgttttc ggacaggatt
    11161 ttacgcaggg cggtataacc gccacgtttg acgtattcgt ccaatgtcca gcaatcggga
    11221 ttggcggtat ccacttggtc aaaaatcacg cctgattggt aaatagccat ttttggtgtg
    11281 cctgtttgtt ttcgtatcgg ttgcggccgc tgtttcagac gaccttaaga tgtctttgtg
    11341 taccggcttg taacgtcgtc tgaaataaaa tctagtttat caaatcgata ttttcagacg
    11401 acctttaatc gtttttgttg gatctcgacc acttgcttgt ctgtcgtcat tcccgcgcag
    11461 gcgggaatcc atcctcaatg gtaagcaatg tcttattaaa ttcagaaacc gaatcttacc
    11521 ggtggattcc cgcctgcgcg ggaatgacgg catttcggta tttcagtagg gcggattctt
    11581 aaatccgaca ttttgccttt ttacccactc tgtcggctac aagtatccga cctacgttta
    11641 aatcgtcgtt tcagacgacc tactccaact ccgccagttt cttctcaatc gcttcttcgg
    11701 tcataaagct gcacatgctg tggttgttga ccagcataac gggagcgtcg ccgcatgcgc
    11761 ccatgcattc gccttcgaca agggtaaact tgccgtcagg ggtagtttcg ccgtagccga
    11821 taccgagttt ttgtttgagg tattcgccgg tagccatacc gccgcgcagg gcgcagggca
    11881 ggttggtaca aacggtcagt ttgtatttgc cgacaggctc aaggtcgtac atattgtaga
    11941 aagtggcgac ttcgtaggct tgtgcaggcg tgatgccgat atagtcggca acaaaagcga
    12001 tggtttcggg ggcgagccag cctttttcgg tttgggcgat acgcaacgca cccatgatgg
    12061 cggaacggcg ttggtcggcg ggatatttcg ccagttctgt gtcgatttgt tttaaggact
    12121 ctgcggataa cattatcggt caacctcccc gaatacgatg tcctgcgtac cgatgatggc
    12181 aacgacgtcg gcgagcatgt ggccttttgc catttcgtcc atgccttgca gatgggcgaa
    12241 gccgggtgcg cggattttca ggcggtaggg tttgtttgcg ccgtctgaaa tgatgtaaac
    12301 gccgaactcg cctttcggat gttcgacagc ggtgtaggtc tcaccctcgg gaacgtgcat
    12361 accctcggta aagagtttga aatggtgaat caggtcttcc atacctgttt tcatttcggt
    12421 acgtttgggc ggagcaaatt tgtggtttgt ggtaatgacc ggacccggat tgacacgcaa
    12481 ccactcggaa cattgtttga tgatgcgtac ggattgacgc atttcttcca tacggcagag
    12541 gtaacggtcg taacagtcgc cgttgacgcc gacggggatg tcgaaatcca ttttgtcgta
    12601 cacttcgtaa ggctgtgtct tacgcacgtc ccattccacg cccgaaccgc gcaacatcac
    12661 gccggtaaag cctttttgca tggcgcgttc gggggagacg acgccgatgc cgacggtacg
    12721 ctgtttccag atgcggttgt cggtcaggag ggtttcgagt gtgtcgatat ttttggggaa
    12781 gcgttcgcag aaggcatcga taaagtcgag catggtgcct tcgcgggatt cgttgagctg
    12841 cttcaatact ttggcattgc ggaatttgct gctctcgtat ttaggcatga agtcgggcag
    12901 gtcgcggtaa acgccgccgg gacggaagta ggctgcgtgc atacgcgcgc cggaaacggc
    12961 ttcgtacaag tccatcagct cttcgcggtc gcggaaggcg tagaggatgg cggtcatcgc
    13021 gccgatgtcg aaggcatgcg aaccgatgcc catcaagtga ttgaggatgc gcgttacttc
    13081 ggcaaacatc acacggatat actgggcgcg gataggtaca tcgataccgg caagtttttc
    13141 tactgccaaa caatacgcct gctcattgac catcatggaa acgtagtcca agcggtccat
    13201 atagggcagg gcttgcagat aggttttggt ttcagccagt ttttcagtac cgcggtgcag
    13261 gaggccgata tgcggatcgg cacggacgat ggtttcgccc tccaactcca aaatcatacg
    13321 caatacgccg tgcgccgcag ggtgttgcgg gccgaagttg atggtgtagt ttcttaattt
    13381 attggccacc gtagttctcc tcacggacga tacgcggcgt gatctcgcgc ggctcaatgg
    13441 taacaggttg gtaaatcacg cgtttttgct cttcgtcgta acgcatttcc acatagccgg
    13501 aaatcgggaa gtctttgcgg aacggatgtc cgacaaagcc gtaatcggtc aggatgcggc
    13561 gcaagtccgg gtggttgttg aacatgatgc cgtacatatc gaaggcttcg cgttcgtacc
    13621 aatccgcgct gttgtaaata tcgactacgg attcgactac ggggaagtcg tcgtctgaaa
    13681 cccagacgcg tacgcggatg cgttgattgt ttttaacgga aagcagctgg ctgacgacgg
    13741 caaagcgttt gccctgccat acttcgtttt tgtaagtgct gtaatcgaca ccgcacaaat
    13801 cgaccagaag ctcgaaatgc aaatcttcat ggtcgcgcaa tgcggtcatg actgagatat
    13861 agtgttcggg cagacactcg acggtaatct cgcccaaagc tgaaatgact ttgcctgcct
    13921 gattgcccag cacaccgatg acggtctcgt ataaattttg aatgcttgcc atatcgtcct
    13981 ctccttactc gtcacgcgcg atggtggaag tgcgcttgat tttttgttgg agctgaatca
    14041 ggccgtaaat cagggcttcc gcagtcggcg gacaacccgg cacataaacg tctaccggca
    14101 cgacgcggtc ggcaccgcgc acaacggaat aagaatagtg ataataaccg ccgccgttgg
    14161 cacacgagcc catagacaat acccaacgcg gctcggcgag ctggtcgtat acgcggcgca
    14221 gggcgggcgc cattttgttg gtcagcgtac ctgccacaat catcaggtcg gcctgacgtg
    14281 gggacggacg gaaaatgatg ccgaaacggt caaggtcata acgcgccata cctgcatgca
    14341 tcatttccac ggcgcagcag gccaagccga aagtaaccgg ccacaatgaa ccggtacgca
    14401 tatagttcag caccgtatcc gcgctggtgg tgatgaaacc ttttttcaaa acgccttcta
    14461 ttcccattcc agcgcacctt ttttccattc gtaaacaaag cctaccgtca gaacgacgat
    14521 aaacaccagc atagaccaga agccgtacac gcccaaatct ttgaacacga cagcccacgg
    14581 cagcataaac gcgacctcca aatcaaacag gatgaagagg atggcgacga ggtaatagcg
    14641 cacgtcgaac ttcatccttg cgttttcaaa ggcttcaaaa ccgcattcgt aaggcgcgtc
    14701 tttttcggca tagtgacgtt tcgggcccaa aattgtgccg agcaggataa acagtacgcc
    14761 ggctgcaaga ccgacaagga taaagacaaa gacgggaaag taagcggaca acatggttac
    14821 acccaaatcc gttaacaaaa tttctacaat aatttcgtat tttagcgaat ttcaaaaacc
    14881 attaaaaggt aaatatcggc aaaacgccca aaaaaaccca ataaatacaa tcatgttatg
    14941 ataacgattc ttatttgatt ttataaggtc atataaattt ttacaccgta attcgt
//
LOCUS       DAWKOX010000032        14812 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.032, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000032 DAWKOX010000000
VERSION     DAWKOX010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14812
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.032"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            220..1062
                     /locus_tag="WJK78_000715"
     CDS             220..1062
                     /locus_tag="WJK78_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ7597666.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     NDRVAVIATLPLTRDESWSQLAVNELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            1091..1555
                     /gene="nrdR"
                     /locus_tag="WJK78_000716"
     CDS             1091..1555
                     /gene="nrdR"
                     /locus_tag="WJK78_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ7597667.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETA
                     ELKMPAVIGTDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSTELADMVLKELLEHNTEAAVRFAALHKRFDNPSDFASWLAQAVKTDRKA"
     gene            1588..2697
                     /gene="ribD"
                     /locus_tag="WJK78_000717"
     CDS             1588..2697
                     /gene="ribD"
                     /locus_tag="WJK78_000717"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ7597668.1"
                     /translation="MFSDTDISMMEIALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLAMLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPQLNVRDFPTLRQP
                     ARIVLDSRLRLPPYSHLVTDGQSPTLIATLERDEDKLRPYREHAHIRILMPSETADSK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAENLADEIVLYRSPKILGSGKDLLSLP
                     ENRAALSAPPLWTPVSTEILGHDIKTVFRKNDNAF"
     gene            2892..4310
                     /locus_tag="WJK78_000718"
     CDS             2892..4310
                     /locus_tag="WJK78_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEZ7597669.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSSQLVSKLAILLLLLTV
                     GLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIPI
                     ALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRA
                     IEENAPPARLSATAEFAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPL
                     FCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACATSFWL
                     FFAFKTESSCRLWQPLKRLPLYTHTLLCLTSSAAYTCFGTPANYPLFAGVWAAYLAGC
                     ILRHRKDLHKLFHYLKKQGFPL"
     gene            4307..4891
                     /locus_tag="WJK78_000719"
     CDS             4307..4891
                     /locus_tag="WJK78_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7597670.1"
                     /translation="MKIVLTTSMAGLGGTETATVRLGRLLRQHGHDIMLASSDGPLLK
                     EAQALGIRWQPVDFYRGGLFGYLKGMIAYARMLRREQPDIIDCQMARVVPACAIAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPADRIVYAY
                     NALPPPRNFLSGKPSKAASCSARCRVWTPSAPCI"
     gene            4843..5379
                     /locus_tag="WJK78_000720"
     CDS             4843..5379
                     /locus_tag="WJK78_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7597671.1"
                     /translation="MLGTLSRLDTVRAVHLMLDIFKKMVDRDMPVRLNVAGIGEEMDN
                     LKAQAERLGIDGKVTFLGGVRDLTAYFKDVDILVNTPHCIGDHGAGVGNNILEAGLYD
                     TPVVTYDMAGISEMVVNGETGYCIPFGDEEAFIAAVDTLVRQPLLREAMGKRLHAHVA
                     ALCSDDEIYRTTMAAYTM"
     gene            5399..6562
                     /gene="pglH"
                     /locus_tag="WJK78_000721"
     CDS             5399..6562
                     /gene="pglH"
                     /locus_tag="WJK78_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminyl-a1,3-N,
                     N'-diacetylbacillosaminyl-a1-diphospho-di-trans,
                     octa-cis-undecaprenol synthase PglH"
                     /protein_id="HEZ7597672.1"
                     /translation="MNITIVAPYCSLPSEPYFNRFWYLAERLSQSHDVLLITSRFRHY
                     DKSFRRHEDAAATSNGRLRVKLLDEPGYRKNVSLARVASHRVFVRNLARWLHSPQAAE
                     QDIVYSAYPLMATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHKLLPFA
                     SRANRAYRCADALVAVSQTYLDRAKEANPNVPGEAVYIGTDFAAIAPPRFRSKTTRLF
                     YLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLEKLKQYENRAIKFYGYLPY
                     SEMMSIAKGCDIAVNAIHSHAMQSVTNKLSDYMALQKPILNSQTNAEVLSLLNLLPHE
                     NYRSGDVDSFVQAAKDILKRKNDPVQSDEIVRRFRRDISYRKIVNLIERLANE"
     gene            6555..8132
                     /locus_tag="WJK78_000722"
     CDS             6555..8132
                     /locus_tag="WJK78_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEZ7597673.1"
                     /translation="MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQ
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRAASLDELPELWNVLK
                     GDMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYI
                     DHYSFWLDMKILFLTVRKVFIKEGISAEGEATMPYFTGNQTNEKNNILILSAGRRVEL
                     VQDFQTEAARFSDGISVFATDLNPRMSSACHVSDGSFEVPPISTDSYIDSIFNLAVRE
                     NIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRS
                     PEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFS
                     EFTVDMYYDRQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMAVLQGARGCI
                     TAQFFYNEETGEFYGVEINPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWEN
                     NLIMLRYDAKVLVHEND"
     gene            8119..8805
                     /locus_tag="WJK78_000723"
     CDS             8119..8805
                     /locus_tag="WJK78_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7597674.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDGKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSLQ
                     DLVPIIDSNT"
     gene            8853..9047
                     /locus_tag="WJK78_000724"
     CDS             8853..9047
                     /locus_tag="WJK78_000724"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597675.1"
                     /translation="MTKYYSWGVNGFPPYVFDTIWKRWKLNGRGGGYRVRHPGRHDRR
                     GQSGKAAAAQKPRDRDGISD"
     gene            9171..10346
                     /locus_tag="WJK78_000725"
     CDS             9171..10346
                     /locus_tag="WJK78_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ7597676.1"
                     /translation="MLNTSLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECRKFEKEF
                     AAFAGTRYAVALSNGTLALDVALKAMGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAIIVVHLAGMPAEMDGIMALAKEHNLWVVEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKELWSKMWSYKDHSKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTVCRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVNELNARKVPCYQGSCSEV
                     YLEKSFDNTPWRPKERLKNAVELGDTSLMFLVHPTLTDGEIAFCKEHIEAVLTEATR"
     gene            10394..12304
                     /gene="pglD"
                     /locus_tag="WJK78_000726"
     CDS             10394..12304
                     /gene="pglD"
                     /locus_tag="WJK78_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ7597677.1"
                     /translation="MTLETLLALPRNIKKIRFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTAPLTIGLFVRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGQAGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDNRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATTSGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPAFEKQIAEGGPITLTHQDITRYFMTIPEAAQLVIQAGAMGKGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADEAMLPWHELSVLLDRIRAACDRYDQQAIRTLLINAPTGFTPSDGICDL
                     LWVRETHRKNAV"
     gene            12360..13652
                     /locus_tag="WJK78_000727"
     CDS             12360..13652
                     /locus_tag="WJK78_000727"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ7597678.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     AEVNAVFADVFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFNLSDGTSAEKAILLPLAPEYIGYADVHVEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDSEMARLD
                     ALAQEHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTR
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(13704..14540)
                     /locus_tag="WJK78_000728"
     CDS             complement(13704..14540)
                     /locus_tag="WJK78_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ7597679.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKRGISGAYDGALALAANKEMVSRTHVAEFLIRVGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYAFLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCRPVWAHFS
                     RH"
BASE COUNT         3403 a         4642 c         3698 g         3069 t
ORIGIN      
        1 gcgggaatga cggctcaaaa gttacggaac gaaaaacaac caaaaccgga caagtcggat
       61 tcccgcctgc gcgggaatga cggaatctta agtttccgtc tttgttttct gttttctgtt
      121 ttcgagggaa taacggggaa caagccgtat ttcagacggc attttcagtt cggggtataa
      181 tccgaatact tgcgaccatc tgaatcattg ggacaaacca tgtgtcaact gctgggcatg
      241 aactgcaata cgccgaccga tattatgttt tcctttgaag gcttccgccg caggggcggc
      301 attaccgacc accatgccga cggtttcggc atcggctttt tcgaaggcaa aggcgtgcgc
      361 ctgttccatg acgacaaacc cagtgccaat tcgcccgtcg ccgacctcgt gcgcgcctac
      421 cagattaaat cggaaaacgt cgtcgcccat atccgcaaag catcacaagg acaaacctcc
      481 ctggcgaaca cccatccctt tatgcgcgaa atgtggggcg gctactggct gtttgcccac
      541 aacggacatt tgattgattt ttttcccgaa cagggcgaat ttttccaccc cgtcggcaca
      601 accgattccg aacgcgcgtt ctgccacatc ctcaaccgcc tgcgcacccg ctttgccgcc
      661 cgtcccgacg acgacacgct gtttgacgcg attgcggggc tgacgcacga aatccgcaaa
      721 ttcgggctgt ttaactttat gctttcagac ggcattgccc tgtttgccca cgccagcaca
      781 ctactgcact acatcgtccg ccaagccccg ttcggcaagg cgcgcctgct cgacgacgac
      841 gtgatggtcg attttgccga agtaaccacg cccaacgacc gcgtcgccgt tatcgccacc
      901 ctgccgctga cccgcgacga atcatggtcc caacttgccg tgaacgaact ggtcatgttc
      961 cgcgaaggca acatcgtccg acacgaccgt cccgaaaacc ccgtctatat gagtgccgaa
     1021 gaaggtctgg aaatcgcccg cgccgccggc gtatcggttt gacgttcaga cggcatcagg
     1081 aagaaacgct atgaaatgcc cgttttgcgc ccaccccgac acccgcgtcg ccgattcgcg
     1141 tctgatggaa gaacgcaacg ccgtgcgccg ccgccgccac tgccccaact gcggcaaacg
     1201 cttcggcacg ctcgaaaccg ccgaactcaa aatgcccgcc gtcatcggca cggacaaaaa
     1261 acgctcgccc tttaatgcac aacgcctccg caacgacctg accgccgccg cccgaaaatc
     1321 cgccctgaca cccgaacaga tcgacgaaac cgtccgcctg acggaacaca ggctctacac
     1381 ttcgggtcag cgcgacatcc cctccaccga acttgccgac atggtgctaa aagagctgct
     1441 tgagcacaac acggaagccg ccgtccgctt cgccgccctg cacaaacgct tcgacaatcc
     1501 gtcagacttt gcctcgtggc tggcgcaagc cgtcaaaaca gaccgcaaag cctgattctc
     1561 cccaacccat actgatacgg tatccctatg ttttcggaca cagatatatc catgatggaa
     1621 atcgccctcc gacttgccgc tttgggacgt ttttccactt cgcccaatcc gcgcgtcggc
     1681 tgcgttatcg cacacggcag ccaaattgtc gggcaaggct tccacgtcaa agcgggcgaa
     1741 ccgcacgccg aagtccacgc cctgcgtcag gcgggcgaaa tggcacaagg cgcgaccgcc
     1801 tttgttaccc tcgaaccgtg cagccattac gggcgtaccc cgccctgcgc cgaagctctg
     1861 ctccgttccg gcgtaacacg cgtcgttgcc gccatgcgcg accccaaccc gctggttgcc
     1921 ggcaaagggc ttgccatgct cgaagcagca ggcatcaaga cggaatgcgg tttactcgaa
     1981 catcaggcaa gggaactcaa ccgaggcttc ctgtcgcgca tcgaacgccg ccgccccttc
     2041 gtccgcctca aatgcgccgt ttcgctggac ggcaaaaccg ccctttcaga cggcagcagc
     2101 ttttggatta ccggcgaaga cgcgcgtgcc gacgtacagg ttttgcgtgc cgaaagctgc
     2161 gcggtgctga ccggcatcgg cacggtgttg gcggacaatc cccaactcaa cgtccgcgac
     2221 ttcccaaccc tgcgccaacc cgcgcgcatc gtgttagaca gccgcctgcg cctgcccccg
     2281 tacagccatt tggttaccga cggacaatct ccgaccctta tcgccacctt ggaacgcgat
     2341 gaagacaaac tccgccccta tcgggaacac gcacacatcc gtatcctgat gccgtctgaa
     2401 acggcagaca gcaaaatcga cctgcaccac ctgatgcgcc tccttgctga cgaaggtttc
     2461 ggcgaaatca tggtcgaagc aggctccgaa ctcacatccg catttttggc agaaaatctg
     2521 gcagacgaaa tcgtcctgta ccgttcgccc aaaatcctcg gcagcggcaa agacctgctt
     2581 tccctgcccg aaaaccgcgc cgccctttcc gcaccgccct tgtggacacc cgtttccacc
     2641 gaaatcctcg gacacgacat caaaaccgtg ttccggaaaa acgataacgc cttttaaagg
     2701 gtttgcgccg tttcactata taataacgcc gataaaaaac ggccccgttc agaccgccgc
     2761 ccgcccggaa aagcgcaacc cggactgccg caccccgccg gcagccgcaa cggactgaaa
     2821 gccgtcaaat tccgatcaag aaaggcttca gacggcacag gcagcatccc gccgccgccc
     2881 ggacatcaaa aatggacaca aaagaaatcc tcggctacgc ggcaggctcg atcggcagcg
     2941 cggttttagc cgtcatcatc ctgccgctgc tgtcgtggta tttccctgcc gacgacatcg
     3001 ggcgcatcgt gctgatgcag acggcggcgg gactgacggt gtcggtattg tgcctcgggc
     3061 tggatcaggc atacgtccgc gaatactatg ccgccgccga caaagacact ttgttcaaaa
     3121 ccctgttcct gccgccgctg ctgtctgccg ccgcgatagc cgccctgctg ctttcccgcc
     3181 cgtccctgcc gtctgaaatc ctgttttcgc tcgacgatgc cgccgccggc atcgggctgg
     3241 tgctgtttga actgagcttc ctgcccatcc gctttctctt actggttttg cgtatggaag
     3301 gacgcgccct tgccttttcg tcctcgcaac tcgtgtccaa gctcgccatc ctgctgctgc
     3361 tgctgacggt cgggctgctg cactttccgg cgaacaccgc cgtcctgacc gccgtttacg
     3421 cgctggcaaa ccttgccgcc gccgcctttt tgctgtttca aaaccgatgc cgtctgaagg
     3481 ccgtccggcg cgcaccgttt tcatccgccg tcctgcatcg cggcctgcgc tacggcatac
     3541 cgatcgcact aagcagcatc gcctattggg ggctggcatc cgccgaccgt ttgttcctga
     3601 aaaaatatgc cggcctagaa cagctcggcg tttattcgat gggtatttcg ttcggcgggg
     3661 cggcattatt gttccaaagc atcttttcaa cggtctggac accgtatatt ttccgcgcaa
     3721 tcgaagaaaa cgccccgccc gcccgtctct cagcaacggc agaattcgcc gccgccctgc
     3781 ttgcctccgc cctctgcctg accggcattt tctcgcccct cgcctccctc ctgctgccgg
     3841 aaaactacgc cgccgtccgg tttatcgtcg tatcgtgtat gctgcctccg ctgttttgca
     3901 cgctggtaga aatcagcggc atcggtttga acgtcgtccg aaaaacacgc ccgatcgcgc
     3961 tcgccacctt gggcgcgctg gcggcaaacc tgctgctgct ggggcttgcc gtaccgtccg
     4021 gcggcgcgcg cggcgcggcg gttgcctgtg ccacctcatt ctggttgttt tttgccttca
     4081 agaccgaaag ctcctgccgc ctgtggcagc cgctcaaacg cctgccgctt tatacgcaca
     4141 cattgctctg cctgacctcc tcggcggcct acacctgctt cggcacaccg gcaaactacc
     4201 ccctgtttgc cggcgtatgg gcggcatatc tggcaggctg catcctgcgc caccggaaag
     4261 atttgcacaa actgtttcat tatttgaaaa aacaaggttt cccattatga aaatcgtttt
     4321 gaccacatct atggcaggct tgggcggcac ggaaaccgcc accgtccgcc tcggcaggct
     4381 actcaggcag cacggacacg acatcatgct tgcctcttcg gacggaccgt tgctcaaaga
     4441 ggcgcaagcc ttgggcatac gttggcaacc cgtcgatttc tatcgcggcg gccttttcgg
     4501 ctacctcaaa ggtatgattg cctacgcccg aatgctgcgg cgcgaacaac ccgacatcat
     4561 cgactgccaa atggcgcgcg tcgtacccgc ctgcgccatt gccgccaaaa tcgtttcgcc
     4621 gaaaaccaaa atcatctacc actcgcacgg tttggacgcg gcaacctacc ccaaaatcgc
     4681 caaactcttc gacaagctgg gcgtgtacat catcggtaac tgcaaacacg aacgcgaaaa
     4741 actcatccgc cacggtttcc ccgccgaccg gattgtctac gcctacaacg cactcccccc
     4801 cccccggaat ttcctttctg gaaaaccgtc aaaggctgcg tcatgctcgg cacgctgtcg
     4861 cgtctggaca ccgtccgcgc cgtgcatctg atgctggaca ttttcaaaaa aatggtcgac
     4921 cgcgatatgc ccgtacgcct gaacgtggcg ggcataggcg aagaaatgga caatttgaaa
     4981 gcgcaggcgg aacgtctggg catagacggc aaagttacct tcctcggcgg cgtgcgcgat
     5041 ttgaccgcct acttcaaaga cgtggatatt ttggtgaaca cgccccactg catcggcgac
     5101 cacggcgcag gtgtgggcaa caacatctta gaagccggac tttacgacac acccgtcgtt
     5161 acctacgata tggcgggcat ttccgaaatg gtcgtcaacg gggaaacggg ttactgcatc
     5221 cccttcggcg acgaagaagc ctttatcgcc gccgtagaca cgctcgtcag acaaccgctg
     5281 ttgcgcgaag caatgggcaa aaggctgcac gcacacgtcg ccgcactctg ttccgacgac
     5341 gaaatctacc gtaccaccat ggcggcctat accatgtaat gccgtctgaa agccgccgat
     5401 gaacatcacc atagtcgccc cttattgctc gctgccgtcc gaaccgtatt tcaaccgctt
     5461 ttggtatctg gcagaacgat tgtcgcaatc gcacgacgtg ttgctgatta ccagccgttt
     5521 ccgccactac gacaaatcat tcagacggca tgaagatgct gccgccactt caaacggcag
     5581 gctgcgcgtc aagctgctgg acgaacctgg ctaccgaaaa aacgtctccc tcgcccgcgt
     5641 cgccagccac cgcgtattcg tccgcaattt ggcacgctgg ctgcacagcc cgcaggcggc
     5701 ggaacaggac atcgtctatt ctgcctatcc gctgatggcg accaacctgc tgttgggcaa
     5761 acacaaagcg cgtttgggct acaaactgat tgtcgatgtg caggacgtat ggccggagtc
     5821 tttctcctcg gtcgtaccat ttttgaaaaa agtaccgcac aagctgctgc cctttgcttc
     5881 acgcgccaac cgtgcctacc gctgcgccga cgcgctggtt gccgtatcgc agacttatct
     5941 cgaccgcgcc aaagaagcca atccgaacgt acccggcgaa gccgtctata tcggtacgga
     6001 ttttgccgcc atcgcccccc cgcgattccg ctccaaaacc acccgccttt tctacttggg
     6061 aacgctcagt tacagctacg acgtggaaac cgtgtgcaaa ggtgttcgga aacttttaga
     6121 cgacggcgaa aacgtcgaat tgcacattat gggcggagga cccgatttgg agaaactcaa
     6181 acaatatgaa aatcgcgcca tcaagtttta cggttattta ccctattctg aaatgatgtc
     6241 gattgccaaa ggctgcgaca ttgccgtcaa cgccatccat agccacgcca tgcagtcggt
     6301 taccaacaaa ctctccgact atatggcttt gcaaaaaccg attctgaaca gccagaccaa
     6361 tgccgaagtc cttagcctct tgaacctgct gccgcacgaa aactaccgtt ccggcgacgt
     6421 ggacagcttc gttcaagccg ccaaagatat tttgaaacgc aaaaacgacc ccgttcagtc
     6481 cgatgaaatc gtccgccgct tcaggcgcga catttcctat cggaaaatcg tcaacctgat
     6541 tgaaagattg gcaaatgagt aaagccgtca aacgcctgtt cgacatcatc gcatccgcat
     6601 cggggctgat tgtcctctca cccgttttcc tgattttggc gtacctcatc cgcaagaatc
     6661 tgggttcgcc cgtcttcttc attcaagaac gccccggaaa ggacggaaaa ccttttaaaa
     6721 tggtcaaatt ccgttccatg cgcgacgcgc ttgattcaga cggcattccg ctgcccgaca
     6781 gcgagcggct cacacccttc ggcaaaaaac tgcgtgccgc tagtttggac gaactgcctg
     6841 aattatggaa tgtcttaaaa ggcgacatga gcctggtcgg cccgcgcccg ctgctgatgc
     6901 aatatctgcc gctgtacgac aacttccaaa accgccgcca cgaaatgaaa cccggcatta
     6961 ccggctgggc gcaggtcaac gggcgcaacg cgctttcgtg ggacgaaaaa ttcgcctgcg
     7021 atgtttggta tatcgaccat tacagttttt ggctggatat gaaaatcctg tttttgacag
     7081 tcagaaaagt ctttatcaaa gaagggattt cggcggaagg ggaagccact atgccttatt
     7141 tcactggaaa tcaaactaat gaaaaaaata atatactgat tctgtcggca ggtcgccgtg
     7201 tcgaattggt gcaggacttc caaaccgaag ccgcacgttt ttcagacggc atcagcgttt
     7261 ttgccactga cctcaacccc cgcatgtctt ctgcctgcca tgtttcggac ggttcatttg
     7321 aagtgccgcc gattagtacc gattcatata tcgacagcat tttcaatctg gcggtacgcg
     7381 aaaatatcgg tttaatcatc ccaaccatag acaccgaact gcaaaagctg gcagacgagc
     7441 gcgaacgctt tgaagcggca agtgtccaca tcgtcgtttc cgattcggac ttcatcgcac
     7501 aatgccgcga caaacggaaa accgccacct tgtttgcccg ctacggcata cgctcacccg
     7561 aaatttacga ccgcaagaag ttggttttcc cttgcttcgc caagccttat gacggcagcc
     7621 gcgccatcgg tgcaaaacgg attgacacac ctgccgacct gacaccggaa gtcttggcag
     7681 acaccaaatt aatgttctgt cagtttatcg acatcgaaaa taaattttcc gagtttaccg
     7741 tcgatatgta ttacgaccgt caatgccgtc tgaaatgcgc catcccgcga aaacgcttgg
     7801 aagtgcgctc cggcgaaatc agcaaaggcg ttacctgcaa aaacagcctc taccaaacgc
     7861 tgctggaaaa aatggcggta ttgcagggcg cgcgcggctg tatcacggcg cagttcttct
     7921 acaacgaaga aaccggcgaa ttctacggcg tggaaatcaa cccccgcttc ggcggtggct
     7981 tcccgctgac gtatgccgca ggcggcaatt atccgagccg gttgatgcgc gaatacctcg
     8041 gcgacgaaga aatcccgttt tcagacgact gggaaaacaa cctcattatg ttgcgctacg
     8101 atgccaaggt cttggttcat gaaaacgatt aatcctgaaa ccaccgtcat cgtcttcgac
     8161 ttggacgata ccctgtattc ggaatacgaa tacaagctct ccggtatccg ttcggtcatc
     8221 gataccgttg ccgcactgta tcccgattgg aattcagaca acctatggcg caacatcgac
     8281 cccgacggca aagattggct ggacaaattg tgccgccact gtggttttaa tgaatcggaa
     8341 aaacaggttc ttttgtggca ataccggctg caccgcccga cgctgactcc gtatgctccg
     8401 ccggatttcc tgtccgaact gaccgcgccc ttcgccgcac gcgcgctgat taccgacgga
     8461 agaagcctga cccaacgcct gaagctggaa gccttgggtc tgtcttccct gtttgacgac
     8521 atcctcatct ctgaagcctg ctcttcggaa aagcccgacg gcaaacgctt ccgccatctt
     8581 caagacaaat atgccgacaa ggcaggctgc ttcatctata tcggcgacaa catttccaaa
     8641 gactttatcg cgccgaacac tttgggctgg ataaccatag gattgcttcc ctccggacag
     8701 aacatccacc gccaccagcc tgaaagtttt aacacagaat atcatcccga cttttgggtt
     8761 aactcccttc aagatttagt tcctataatt gattcaaata cttaaccatt acataatcaa
     8821 acatgcactc acaatattaa aaggactatt tcatgacaaa atattattca tggggcgtaa
     8881 acggctttcc gccctacgtt ttcgacacca tttggaaacg atggaagttg aatgggcgcg
     8941 ggggcggtta tcgtgtgcga catcccggac ggcatgaccg tcgcgggcaa tccggcaaag
     9001 ccgctgccgc gcaaaaaccc cgagaccgcg acggcataag cgattaaaat acacccccgt
     9061 acagaccgat tttggcaaca cctgcggcgc gcgcccgatt cttcggaaca cgcccccttc
     9121 agacggcata gagtcagaaa tgccgtctga aaaccgacgg accaaacacc atgctgaaca
     9181 cctccctttc cccgtggccc tgcttcaccc aagaagaagc cgatgccgtt tccaaagtcc
     9241 tgctgtccaa caaagtcaac tactggacgg gaaacgaatg ccgcaaattt gaaaaagaat
     9301 tcgccgcctt tgccggcacg cggtacgccg tcgccctttc caacggcacg ctggcactcg
     9361 atgtcgcgct caaagcaatg ggcataggcg cgggcgacga tgtgattgtt acctcgcgca
     9421 ctttcctggc ttccgcatcc tgcattgtga acgcgggcgc aaatccggtg tttgccgatg
     9481 tggatttgaa cagccaaaac atcagcgcgg aaaccgtcaa agccgtgctg accccgaata
     9541 ccaaggcgat tatcgtggtt caccttgccg gtatgcctgc cgaaatggat ggcattatgg
     9601 ctttggcaaa agaacataat ctttgggttg tcgaagactg cgcccaagcg cacggcgcga
     9661 aatacaaagg caaatccgtc ggcagcatcg gacacgtcgg cgcgtggtcg ttctgccaag
     9721 acaaaatcat gaccacgggc ggcgaaggcg gcatggttac caccaacgac aaagaactgt
     9781 ggagcaaaat gtggtcgtac aaagaccaca gcaaaagcta tgacgccgtg taccaccgcg
     9841 aacacgcccc tggcttccgc tggctgcacg aaagcttcgg cacaaactgg cgtatgatgg
     9901 aaatgcaggc ggcaatcggg cgcattcagc tcaaacgcct gcccgaatgg actgtctgcc
     9961 gtcaagcgca cgccgccaag ctggcggaaa gcctaggcaa attcaaaagt atccgcttgg
    10021 ttgaagtcgc cgactacatc ggacacgcgc aatataagtt ctacgccttc gtcaaacccg
    10081 aacacctcaa agacggctgg acgcgcgacc gcatcgtcaa cgaactgaac gcgcgcaaag
    10141 tcccctgcta tcaaggtagc tgctccgaag tgtatttgga gaaatccttc gacaacacgc
    10201 cttggcgtcc gaaagagcgg ctgaaaaatg ctgtcgagtt gggcgacacc agcctgatgt
    10261 tcttagtaca tccgacgctg accgacggcg aaatcgcgtt ctgcaaagaa cacatcgaag
    10321 ccgtattgac cgaagccaca cgataaccct tcagacggca tatgccgcct gaaagcacat
    10381 accgccccac gatatgactc tggaaaccct gcttgcccta ccgcgcaaca tcaagaaaat
    10441 ccgtttcctc atacacgatt ttctgatgat tttcattgcc ttttggttta cccaaagcct
    10501 gaaggccgac tactcgaacg aatggttcga ccctgccaac tggcagtctt tcctattgac
    10561 cgcgccgttg accatcggcc tgttcgtcag aatggggctc taccgtgccg ttacacgctt
    10621 catcagcttc cgcatcctct ccaccgcgct ggcaggcagc ctcgcctccg ccgtattgtt
    10681 cttcctcaac acattgattt ttgaagaaag gctgcgcctc gccctgccga ttgtctattt
    10741 cttactgctg tttgtttccg tgaccggctc gcgtatggtt ttgcgcggac tgttgtccga
    10801 acaccccaaa aaacagatga tccccgtcat catttacggc gcggggcagg cgggcagaca
    10861 gcttctcgag gccgtcaaac aaatgcgcga atattccgcc gccgcctttg tggacgacga
    10921 ccccaaactg tggcacaccg tcatctacga ccttgccgtt taccagcccg atgccatcgc
    10981 cttcctcatc gaacgctacg gcgtggaaaa aatcctactc gccatccccg gcgcgaccca
    11041 ggaacaacgc cgccgaatca tcaacaaact ggaagcctat ccgtgcgaag tgttgaccat
    11101 tcccggaatg aaagacctga tggacgggaa aatcagcatc ggcacgctca aaaaaatctc
    11161 tgtgtccgac ctgctcgggc gtgattccgt cgcgcccgac aaccgcctga tgagtgccga
    11221 catcgaaggc aaaaccgtca tggtaaccgg cgcgggcggc tccatcggtt cggaactctg
    11281 ccgccagatt atccgccgcc gccccgaaaa gctgctgctg ttcgagttat ccgaattcgc
    11341 cctgtacgcc gtcgaaaaag aattgcgcga aacctgcatc caaaaacgcc tcgacaccga
    11401 aatcctgccc tttctcggtt cggtgcaaaa ccgcacgctg ctcgaacacg tcatgaccgc
    11461 cttttccgtt gcgaccgtct atcacgccgc cgcctacaaa cacgtcccca tggtcgagtt
    11521 caacaccgtc gaaggcatac gcaacaacat cttcggcaca ctcgagtgcg cgcttgccgc
    11581 cacgacatcg ggcgtggaaa ctttcgtcct catctccacc gacaaagccg tccgccccac
    11641 caacaccatg ggtgccagca aacgcatggc ggaactctgc cttcaggcgc tcgccgccga
    11701 acccggacaa aaaacccgct tcagcatggt gcgtttcggc aatgttttag gttcgtccgg
    11761 ctccgtcgtc cccgcatttg aaaaacaaat tgccgaaggc ggcccgatta ccctgaccca
    11821 ccaagacatt acccgctact tcatgaccat tcccgaagcg gcgcaactgg ttatccaagc
    11881 cggcgcgatg ggcaaaggcg gcgacgtatt cgtcctcgat atgggcgaat ccgtcaaaat
    11941 catcgacctt gcccgccaaa tgattacctt aagcggcctc aaacccaaaa cacccgaaca
    12001 acccgacggc gacatcgaaa tcctcattac cggactgcgt cccggcgaaa aactctacga
    12061 agagctgctc atcggcgaca acgtccgcaa aaccggccat ccgcgcatta tgacggctga
    12121 cgaggcgatg ctgccgtggc acgagctctc tgtcctgctc gaccgcatcc gtgcggcctg
    12181 cgaccgttac gaccagcagg caatccgcac cctgctcatc aacgccccga ccggctttac
    12241 cccaagcgac ggtatctgcg acctgctttg ggtacgagaa acacacagaa aaaatgccgt
    12301 ctgaaccttc agacggcata acgtacaaac caacctacct tacacacacg gagtttgaca
    12361 tgcagttctc agcattcggc gaaaaattca cgcaacacag cggcatcctc caactgatgg
    12421 acgacctcgg cgacgcgctc aaaagcgaca agcccgtcaa tatgctcggc ggcggcaatc
    12481 cggcgcgaat cgccgaagtc aatgccgtgt tcgccgacgt attttccaaa ctggcagcag
    12541 aacatgccgt cgaaaacatc ggcaactact ccaatcctca aggagatgcc gcgctgattg
    12601 acgcgctgac cgccttcctc aaccgcgaat acggctggaa cctgaccgcc gacaatatcg
    12661 cgctgaccaa cggttcgcaa aacgcgtttt tctatttatt caacctcttc ggcggcaaat
    12721 tcaacctttc agacggcaca tccgcagaaa aagccatttt gttgccgctc gcgcccgaat
    12781 acatcggcta tgccgacgtg catgtcgaag ggcagcactt cgtttccgtc aagcccaaaa
    12841 tcgaaaacgt cgaacacgaa ggcgaagcag gcttcttcaa ataccgcgtg gactttgacg
    12901 cactggaaaa cctgcccgaa ctcaaagcgg gcaaaatcgg cgcgatttgc tgttcgcgcc
    12961 cgaccaaccc gaccggcaac gtgctgaccg acagcgaaat ggcgcggctg gacgctttgg
    13021 cgcaagaaca cggcattccg ctgattatcg acaacgccta cggaatgccg ttccccaaca
    13081 tcatttacag cgacgtaacg ctgaattggc atgaaaacat catcctctgc ttcagccttt
    13141 ccaaagtcgg tctgccgggc gtgcgcaccg gcatcatcgt cgccgcgccc gaagtcgtca
    13201 aagccgtcag cagcctgaac gcgattgtga accttgcccc cacgcgcttc ggcgcggcca
    13261 tcgccgcccc gctactggaa agcggcgaga tgaaacggct tgccgaccaa gtcatccggc
    13321 cgttttaccg caatcaggcg caaaccgccg tctcgctgct caagcgcgag ctgggcgcgt
    13381 acccgatgaa aatccacaaa cccgaaggcg cgattttcct gtggctctgg tttgaaaacc
    13441 tgcccgtttc ttcgcaaacc ctgtacgaaa tgctcaaagc cgaaggtacg ctgattattc
    13501 cgggcgaaca tttcttcgtc ggcatcgaca cgcgggatta tccgcacgcg ggcgagtgca
    13561 tccgtatgag catcgcgcag gacgctcaaa cgctggaaaa aggcattgcc gccatcggta
    13621 aaaccgtccg aaaactgtac gacaacgttt aaaccgcaaa aaatgccgtc tgaaggcctt
    13681 tcagacggca tttttatccg cattcaatgt cgggaaaaat gcgcccacac tggcctgcag
    13741 ttttccggca gttcgggaca cgcgccgagg atgccgccgc tgaagtcgtt taaacggtgg
    13801 aagtcgctgc ccgcactggc gagcatgccg aagcgttctg ccaaaaatgc gtagttgagg
    13861 cggtcgtttt tgcagcagtt gccgctgtgg acttcgatgc ccgcgccgcc gaggttttta
    13921 aattcttcaa acagattgcg cttggcggta gcggacaaat catagcgcat cggatgggcg
    13981 atgactgcca tgccgcccgc gccgttgacg gcggagacgc agtcttccag cgtcgcccat
    14041 tcgtgtcgga cggcgcagga tttgccgtcg cccaagtatt tggtgaacgc ctgctgcttg
    14101 tttttgacgt gtcccacccg aatgaggaac tcggcgacgt gtgtgcggct gaccatttct
    14161 ttgtttgccg ccagcgcgag cgcgccgtcg tatgcgcccg aaatgccgcg tttttccagc
    14221 ttggcggcga tggcttcgag gcgtttcaga cggccttgcc gcacttgcgc caacaggttt
    14281 tgcaggtttt cgtcttgttc gtcaaagtct aagccgacaa cgtgtatggt acgcccgcgc
    14341 cacgttacgg agatttccac gccgttaatc aggcgcaaac cgagcctgtc ggcttcggca
    14401 cgcgcttcgg cgatgccgcc ggtgtggtcg tggtcggtca acgccagcag cgtgcagccg
    14461 ttttgatgcg cgaggcgcac aacttcggcg ggggagagca taccgtcgga aacggtggaa
    14521 tggcagtgca ggtctatcat aaggcgttat gtgcgtggta aatggtgggc agggtgtttc
    14581 aatattgtcg ggcggtgtgg cggcggtgat ttcaaaaaac aggtgtatgg caaatgcaaa
    14641 ggaaaagccg ctatgccgtc attccagcgc aggcgggaat ccagactttg atttattgga
    14701 aatgtttaag gttaaccgct atttcaaact tccggattcc tgctttcgag ggaatggcga
    14761 tatgaccgtt ttcaatttta atctactata aaagactgtc tgaaaacgtg gt
//
LOCUS       DAWKOX010000033        14744 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.033, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000033 DAWKOX010000000
VERSION     DAWKOX010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14744
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.033"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            52..1005
                     /locus_tag="WJK78_000729"
     CDS             52..1005
                     /locus_tag="WJK78_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ7597680.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1116..1439)
                     /locus_tag="WJK78_000730"
     CDS             complement(1116..1439)
                     /locus_tag="WJK78_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597681.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1612..2973)
                     /locus_tag="WJK78_000731"
     CDS             complement(1612..2973)
                     /locus_tag="WJK78_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ7597682.1"
                     /translation="MLKKWLNKMLPSSRSSKEAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKEAGFQAYVVGGAIRDLLLGIEPKDFDVATDAMPEQVHKLFRRSRIVGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGT
                     DWE"
     gene            complement(3328..5028)
                     /gene="recJ"
                     /locus_tag="WJK78_000732"
     CDS             complement(3328..5028)
                     /gene="recJ"
                     /locus_tag="WJK78_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ7597683.1"
                     /translation="MSAKIQTRSVNTDVFNHLLTAGADPLIAQLCASRGVQSPAELDD
                     KLASLLPYQSLTNCEAAARRLADAVGRKEKILIVADYDADGATACSVGMSGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLMALRAELRRRNYFSDGIKEP
                     NLGELLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDTEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQMTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTFITDGSLPARDITLEQAQNLAKHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAA
                     "
     gene            complement(5174..5818)
                     /locus_tag="WJK78_000733"
     CDS             complement(5174..5818)
                     /locus_tag="WJK78_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597684.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDKPADIAKLKQLGFEAVELDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPPPF"
     gene            complement(5865..6377)
                     /locus_tag="WJK78_000734"
     CDS             complement(5865..6377)
                     /locus_tag="WJK78_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ7597685.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAIVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     RTRMELLADDGALTQFMSDFPNADAGKLRTLIRNTKKEQEQNKPPKNFRALFQELKTV
                     MESQGGTGEA"
     gene            6531..7862
                     /gene="pmbA"
                     /locus_tag="WJK78_000735"
     CDS             6531..7862
                     /gene="pmbA"
                     /locus_tag="WJK78_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ7597686.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESIGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADACLMAKHIGDPDLYHEWDLDTEAAVGLAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            7874..8065
                     /locus_tag="WJK78_000736"
     CDS             7874..8065
                     /locus_tag="WJK78_000736"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597687.1"
                     /translation="MPSEDEGSTFCPVPARLPFYAAPPFADNIAHFFISTDFPLSVKI
                     LSHLSTTGYTQVQDKACGD"
     gene            complement(8159..8362)
                     /locus_tag="WJK78_000737"
     CDS             complement(8159..8362)
                     /locus_tag="WJK78_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ7597688.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8605..8907
                     /gene="clpS"
                     /locus_tag="WJK78_000738"
     CDS             8605..8907
                     /gene="clpS"
                     /locus_tag="WJK78_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ7597689.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8909..11200
                     /gene="clpA"
                     /locus_tag="WJK78_000739"
     CDS             8909..11200
                     /gene="clpA"
                     /locus_tag="WJK78_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ7597690.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(11240..14338)
                     /locus_tag="WJK78_000740"
     CDS             complement(11240..14338)
                     /locus_tag="WJK78_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ7597691.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSKPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSTDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQRVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKKLSAAENRQALL
                     HPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKVATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNQEIDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEEYMNGYIDSQTG
                     EARRGYLDVAKELRERFPDPDEIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QNVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYNDIRDWLSRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEDLNETA
                     AKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGT
                     DI"
     gene            complement(14417..>14744)
                     /locus_tag="WJK78_000741"
     CDS             complement(14417..>14744)
                     /locus_tag="WJK78_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ7597692.1"
                     /translation="QQLTNFTIKDEFKDALDINFAFYYFFIIAEQSKKLINTSSLPII
                     SMKELKKLKIPIPPLPEQEKIAAILDKFDILTHSISEGLPHEIALRRKQYEYYREQLL
                     AFPKAT"
BASE COUNT         3407 a         4166 c         3692 g         3479 t
ORIGIN      
        1 taatccacta tagattaaaa tcacacaata tccaactatt cggaccttca tatgacacat
       61 accgtccacc tgcatttaga agaaaccgac aacttggcgt tgcagcgtct gtgcggttct
      121 tttgacaaca accttgattt acttgctaaa gcactcgata tccacatcag ccgccgtttt
      181 gaacatttca ctttcaacgg cgcatttgca cacgccggca aacgcgcact gctcaaactc
      241 ttggaaacgg cgcagacgcg cgacctaaac gacggcgaca tcaggcttgc cgccgtcgaa
      301 gcccaaaccg aagatgccgg tcatcaagaa aaaaaccatg accacgccta ttatttccgt
      361 accaaacgcg gcagcatcgg cggcagaacg ccacggcaga acggctatat ccgcgcccta
      421 ctcaaccacg acatcgtatt cggtctcggg ccggcaggta cgggcaaaac ctatctcgcc
      481 gtcgccgccg ccgtcgatgc gatggaaaaa caccaagtcg aacgcatcat tttagtgcgg
      541 cctgccgtcg aagccggcga gaaactgggt tttctgcccg gtgacctgac ccagaaagtc
      601 gatccctacc ttcgtccgct ttatgatgcc ctctatgacc tgatgggctt tgaccgtgtc
      661 accaagctga ttgaaaaagg cctgattgaa atcgccccgc tcgcctatat gcgcggcagg
      721 acgctcaacg gcgcatacat catcctcgac gaagcgcaaa acaccacgcc cgaacaaatg
      781 aaaatgttcc tgacccgcat cggcttcggc gcgaaagccg tcattaccgg cgacaccagc
      841 caaatcgacc tgcccaaaaa catcaaatcg ggattaaaag atgcgcgtga gaaactgcac
      901 ggcgtggaag ggctgtattt ccacaccttt accggcgaag acgttgtccg gcatcctttg
      961 gtgcaaaaaa tcgtcgaagc ctacgaatcg gcagaacacg actgacattc caatgccgtc
     1021 tgaaacccga tgcatggaaa atcgggcaga gaaaaacaga tacggaagcc aagctccgta
     1081 tccgtatccg tttctttatc cgtccaaccg atacatcaat cgaattttct gcatcggatt
     1141 gcctcatctt cgcaaaacat tgccgaagtt tcgcggttgc acgcctgacg cactttctgc
     1201 cgcgccacgc cttcattccg atcgcttgcc tcaaacgtct tctgaaaagg cgtaacgctg
     1261 catacataca tggtggaatt tgaaccgaaa aggtcgattt tgacggtatt gctgccgctt
     1321 tccaatacgg cgacacggtg ttccaactgc gccagacgtg cttccaaatc gccgattctg
     1381 tcggcaaatg caggcatggc ggcacacgcg gtcaaaatgc ccaaaataca ttttttcatc
     1441 aatttttcct tgtttcttga accctgccca cccggacatc ctttttccga gaggcagggt
     1501 tagactttat ttacggggat gaatcccctt acaaatcagg ataatacata gaacggcact
     1561 ttatgcttca tcccatgtgt tgaaacttca ttgctccttg tctgttgacc cttattccca
     1621 atccgttccc acaaccttcg gcttgggttt gcgcctgcga cggcggcgtt ttttcgcctg
     1681 tccttcgttt ttttcgtgtc gggcggcggc ttcgtttttg gtcatctccg accgctgttc
     1741 cgtcgatgcc gtctgaaacg ccgtccacca ctcggcaagg gcgcggtccg cattgccggt
     1801 ttcggcgcgc aagagcagga aatcataggc ggcacggaaa cgcgcctgtg caaacagttt
     1861 gtgcggacgt gcgcctttgc ggttttcaaa ctgcggctgg aacatccaaa tttcgcgcat
     1921 cgtggcggaa aagcgttgcg gcacgcccca accgcgttcg acggtttcgc gcatcgtatt
     1981 gattgcatcg gacagggcgg gcgcgggttt caaaccctgt tgcagattgc ttttccaatg
     2041 gcgttccaac tcgggccaca tcagagccgc caatacaaaa ccgaccgaaa ccgatttgtc
     2101 ggcacgcagc cgctcatcgg tatttttcag ggcaagcacc gtcatttttc cggcgatgcc
     2161 gtctgaaaca cgcaaggcat tgagcagcgg atggatgtcg tccggtatgt caaatccgtt
     2221 caaacgtttc agacactcgc gcgcgtgccc tgaaaacagc agtttcatga tttcgtcaaa
     2281 cagcctcgct accggttcgt gcttcagacg gcatatcgat tcggcaatcg gtgcggtggt
     2341 ttcttccgac agctcaaagc ccaatttgcc cgacaggcgg atggcgcgca aaatcctgac
     2401 agggtcttcc tgatagcgtt cggcggcatc gccaatcata accagcctgc gggcggcaac
     2461 atcggcaatc ccgttgtgga aatccaaaat ctcttctttt tccggatcgt aatacaaggc
     2521 attgcaggta aaatcgcgcc gcatcgcatc ttcttcgatg ctgccgtagg tgttgtcctt
     2581 cataatcctg ccgtgcgcgt tctgatgaac tttcgcaccg ccgcgaaacg tcgttacttc
     2641 gataatctcc gcaccgttca tcacatggac gatttgaaaa cgcctgccga cgatgcggct
     2701 gcggcggaag agtttgtgca cctgttcggg catggcatcg gttgcgacat cgaaatcctt
     2761 gggttcgatg ccgagcagca ggtccctgat cgcgccgccg accacataag cctgaaaccc
     2821 tgcctctttc aggcggcgta tgacgttttc ggcggcaaag ctcaacattt cggcacggat
     2881 gttgtgtctt tcggcaggaa tgaccgtttt actttccgct tctttactgc tccgactgga
     2941 aggcagcatc ttattcaacc attttttcag cataaatatt ctgacccgaa gagcggcatc
     3001 tccacgggca accgtgttca gacggcatcg ggcgcaggtt tgcaagatgc cgtaaccata
     3061 aacaaaaggc gtagaaacta cgccgtccga atcacgccgc cctcgcggcg gcaacgcgtc
     3121 attataacag attgccctcc aaaaaaatca gaccctgctt ttgtggcaga gtctgaaatt
     3181 tgatgcacct tatatattgc gtccctaaga agggatgatt aacaaaaatt aacgcccttt
     3241 actttctttt ccgattggga acattcccgt cgtacaaaca ggcaaatgaa ggaacagaaa
     3301 tcacattcaa acggcgttcc gccgcctcta cgccgcttcc cagtagtcga tataaagctg
     3361 caattcgagg ttgttgcgcc attcgttggc aacggggcgg tacaccgtgc ggatgtattc
     3421 gggaatgtct tcgctgcacc gccagaacat tgcttcaaat tcgcagccgt ctttttgcag
     3481 ccacgctttt ttgtgtttgc cttccgcgcc caaaggctgc tggcggacga cgtggaactc
     3541 gtcggtaaaa ctcggcggcg cgaagccctg cccccaaacg tgtttagcaa ggttttgcgc
     3601 ctgttccagc gtaatgtcgc gtgcaggcag gctgccgtcg gtgatgaagg tttgcgacaa
     3661 atcgtcttcg cacaccattt cgcgcacggc ttcttcaaag gccgtctgaa acgcgggaat
     3721 gttgtgttcg agtatgctca agcccgccgc catcgcgtgt ccgccgaatt tcaaaatcaa
     3781 atcgggatgg cgtttggaca ccaagtccaa agcatcgcgc aagtgaagat tgggaatgga
     3841 acgccccgaa ccgcgcactt caccgttgtc ggcaggcgca aacacgatgg tcggacgata
     3901 aaaacggtct ttgaggcggc tggcaacgat gccgaccacg ccttgatgga agtcgtcgcg
     3961 atacgccacc aaagtcatct gacctgaagg cagggtttca ggaaaagcat tcagcgcgtc
     4021 ttgcagcata gactgctcga tttcgcgacg ttcgatattg aggttgttta actgcgccgc
     4081 cagttcctgc gcctcggtat catctcgcgc caacaggcag gcaataccga ccgacatatc
     4141 gtccagccgt ccggcggcgt tgatgcgcgg gcccaacgca aaacccatat caaacggctg
     4201 cgccttgcgc caatcgcgcc gcgccacttc aaacaaggcg cggataccgg ggcgcatttt
     4261 gccggagcgc atccgtttca aaccttgcga cacgaggatg cggttgttgt ggtcgagagg
     4321 gacgacatcg gcaaccgtgc cgagtgcgac caaatccaaa agttcgccca gattcggctc
     4381 tttgatgccg tctgaaaaat aattgcggcg gcgcaattcg gcacgcaaag ccatcaatac
     4441 ataaaaaatc acgcccacgc ccgccaagct tttgcttgga aaaccgcagc ctttttggtt
     4501 cggattgacg atgatgcagt cgggcacggt ctcggcaggc agatggtggt cggtaacgat
     4561 gacatccaaa cccagagcct gcgcgcgcgc cacgcctgcg atgctggcga taccgttatc
     4621 aaccgtaatc agcaaatcca caccttgctc tgccgcgatt tcagccagct cgggcgttaa
     4681 gccgtagccg tgctcaaagc ggttgggcac aaggaaatcc actttcgccc ccatcgccgc
     4741 caaaccgctc ataccgacgg aacacgccgt cgcaccgtcg gcatcatagt cggcaacaat
     4801 caggattttt tccttgcgcc caaccgcatc cgccaaacgg cgggcggcgg cttcgcaatt
     4861 cgtcaacgat tgataaggca ggagggaagc gagtttgtcg tccaattcgg caggactttg
     4921 cacaccgcgc gaagcacaaa gctgggcgat taaaggatcg gcaccggcgg tgagcaaatg
     4981 attaaaaacg tcggtattga cggatcgggt ttggattttg gctgacatga cgaggttttt
     5041 tcaagatatg atgaggctga aatgccgtct gaaagctttt cagacggcat tgctgttcat
     5101 ttgcgggcgg catccacgac cgcacccaga gccgccgcag gcaaagccag taccgcgccc
     5161 gccgcatcca gtatcaaaaa gggggggggg gcgtatataa gatatttgca aacagcttgg
     5221 atttgtcggt atgtttttca gtaaccgtgt aataaatatc ggcaggcaca ctttgctcaa
     5281 aatgataatc ggcgttcagt ttttgcggcg tggcgtagta tttgcctttg gcggatacgc
     5341 agcgcgtgta aatagtccga ttgtcaagtt cgaccgcttc aaacccgagc tgtttcagct
     5401 tggcgatgtc ggcaggcttg tcggtatcgt agcgcaggca aaggccttcg gtactgaaat
     5461 tctggctgcc aggcgattcg agtttgaccg gcagggcttg gtggcgagca tagctcgggg
     5521 tatcctcaac tatttggaag ggtttgtcca gccctgcctt caaaatgccc gtcagcttcg
     5581 ccgaatcttc gggattgacg acgaaccagt atttcccgcc catcatcacc agactgccct
     5641 tttccaattg ggcattgtct ttggcaacca caccgaaggc gcggatttga tccttgtcaa
     5701 cgtgtttata ggcggtcgtt tggctgaacg ggtcgttcat gccccacatc attgccgtac
     5761 agccgttcaa catcaaggct gccgccaaaa cggcggcggt cgttttacgg aacaacattt
     5821 tatcttccaa tcagaatgac ggcggatgcc gtctgaaaat atgcctaggc ttcccctgtt
     5881 ccgccttggc tttccataac ggttttcaac tcttgaaaca gggcgcggaa atttttcggc
     5941 ggtttgttct gttcctgttc ttttttggta ttgcggatga gcgtcctcag cttgcccgca
     6001 tcggcgtttg gaaaatcgga cataaactgc gtcagcgcgc cgtcgtccgc cagcagctcc
     6061 atccgcgtcc gctccacacg ttgcaaaaag gcgttgtgcg ccgcatcgtc gccgcgcagc
     6121 ttggcaagaa atgcctcgat gggcgcggga tcggtatcgc gcatcagtct gccgataaat
     6181 tgcgcctgcc gcttgagcgc gccgttggat gtgatttttt tataggtaac gatggcttcg
     6241 tacaaatctt cgtccaagcc gatttttttc aacgtgtcgc ttgagagctt ggtcagctcc
     6301 atacccaaat cctgcaaacc gttcatctgc tttttcattt gggttttgct gacccattcg
     6361 tcttcttgtt caaacatctt cattctcaaa ttttatccga cgggcgcatt ttaacagaat
     6421 gattccgcgt tcagacggca ttttgcaccg tccgccctgc aaacggacgc ttttgcccct
     6481 gccgcccgaa acggttaaaa tgccgcaacg ctccaccaag aaagatttct atgctgttca
     6541 accacaccgc ttccgaactt ctcgacctct gccgccgcac gctcgacttg gcaaaagcag
     6601 cgggcgcgac cgccgccgaa gccgatttca gcgaatccat cggacaaagc gtcagcgtgc
     6661 ggctgggcga aatcgaacaa atcgagttcc agcaggacaa gtcgctggac attaccgttt
     6721 acgtcggcaa acgcaaaggc cgcgctggca ccgccgattt ctccgaacaa gccctgcgcg
     6781 acaccgtccg cgccgccgcc gacatcgccc gccacaccgc cgaagacggt tgcgccggac
     6841 ttgccgatgc ctgtctgatg gcaaaacaca tcggcgaccc cgacctttac cacgaatggg
     6901 atttggatac ggaagccgcc gtcggcttgg caaaacaatg cgaacaagcc gccctgaacg
     6961 aggatgagcg catcgaaaac tccgaaggcg cggcggtgca aaccggccat taccaatacg
     7021 tttacggcaa cacccacggt tttgccgcac accggcaagg cacgcaccac agcatttcct
     7081 gcagcgtcgt tgccgccgac gaaaacggca tgcagcgcga ctactggtac gattccgcct
     7141 gccgccatcc ggatatggac agccccgaaa ccatcggtca aaccgccgcc cgccgcactt
     7201 tgcgccgact cggcagccgc agcatcccga caggcagcta ccccgtcctc ttcgatacca
     7261 ccgtttcggg cggtcttatc ggacacctcg tcggcgcact ctccggcggt gcgctctacc
     7321 gccaaagcag tttcctgatc gacagcatcg gcaaaaaagt cctgcccgat ttcctcaacc
     7381 tgcgcgaaga accgcacatc ccccgctctt tccgcagcag ctattttgat gcggaaggcg
     7441 ttgccaccgc gccgcgcttc gtgattcaaa acggcattgt cgaaggctat ttcctcagca
     7501 gttacagcgc gcgcaaactc ggtatgcaga ccacgggcaa cgccggcggc gcgcacaacc
     7561 tgtatttgaa ccatacgcac gaaacgcaat ccgacctgct gaaagaaatg gggacgggat
     7621 tgttggtaac cgaactgatg ggacagggcg cgaacaccat taccggtgac tactcgcgcg
     7681 gcgcggcggg tttttgggtg gaaaacggcg tgattgccta ccccgtccac gagattaccg
     7741 tagccggacg cttgcaggat atgtaccgcg acattgtcgg cgtggcggat gacgctttgc
     7801 ggcgttcgtc caacaaaatc ggctcgattc tgattgcggg gatgacggtt gccggaagct
     7861 gaacgccctg ccgatgccgt ctgaagacga aggcagcacg ttttgccccg tgcctgcccg
     7921 tttgccgttt tatgccgcac cgccttttgc cgacaacatt gcacattttt tcatcagcac
     7981 tgattttccc ttatccgtca aaatactaag ccacttgtcc acaacagggt acacacaagt
     8041 tcaggataag gcgtgcgggg attagggttt ttccgccgcc ggcaaaacgg cagacaaaaa
     8101 cggcgggaca ttgcctgtcc cgccgttttc aaatatacat ttgaccgtac atcaggaatt
     8161 aagcagcctg aatgttggcg gcctgtttgc ctttagggcc ggtggttacg tcgaaagaga
     8221 cgcgttggcc ttctttcagg gttttgaaac cttccatatt gattgctgag aagtgagcga
     8281 acaaatcttc gccgccttca tcaggagtga tgaaaccaaa acctttagcg tcgttaaacc
     8341 attttacgat accggttgcc attagaaact tcctatactc aaaaattaac aaaatcagca
     8401 aaacaaggca tacggcaaac cgagccgtct agcgttcctt ccagcttgat atactcggcg
     8461 gatgcccaat cctgcttaac cgtcttttta catttgttaa gacaaaacgt caagctatgt
     8521 tttcaaaaaa gtgggaaaat aggcaaaagt accgaaaata caacaaaaat gccgtctgaa
     8581 cgcggctttc aaatgggaca cactatgacc gcgcaacacc aatccgacac gctcttgcac
     8641 cgtctgaaca ccctgccgcc gaaacgttac ggcgttttcc tattgaacga cgattacacc
     8701 acgatggaat ttgtcgtcga aatcctgacc gaaatcttta tgctcggaca agaacaggcg
     8761 gtagcggtga tgctcttggt tcatcacgaa ggcaaaggcc tgtgcggcac ttacacgcgc
     8821 gatattgccc aaaccaaaca acaacaagtc atgcagcggg caaaagccga agggcatccg
     8881 ctgcaatgta ttgtcgagga gatttaatat gcttgcaccc gaattggaac agattttgca
     8941 gcagctttac cgcgaggcgc gtaaggctca ttatgaattt atcagcctcg agcatctgct
     9001 tttggtactc atcgaagaag atgcctccgt gccgaacgtc ttaaaactct gcggcgcgga
     9061 tttgaaagtg gtgtccgaac agctcgccgc cagcgttgcc gaaaacaccc ccctgattcc
     9121 cgaacacctt ttagacacgg tcgaaacccg gcccacgctc ggcttccaac gcgtgatgca
     9181 acgggcgatg gtgcataccc agtctgccgg aaaagccgca gtcgaaccgt tggacgtttt
     9241 ggtcgcgctg atgagcgaaa ccgacagcca caccgtctat ttcctcaagc tgcaatcggt
     9301 tacgcgtttt gaagttttgc gctgtattgc ccacggctct cccgatgaag atgaagacga
     9361 tggcaactat tcttcagacg gcatggacga cgataatgaa aaccgcacca aaccgggcaa
     9421 aaacccttta tcggcgtaca ccgtcaacct caacgccgaa gtcaaagccg gccgtatcga
     9481 ccctttgatt ggtcgcaaac acgaaatgga acggctggtg caaatcctat gccgccgccg
     9541 caaaaacaat ccgcttttgg tcggcgaagc gggcgtgggc aaaaccgcgc tggcggaagg
     9601 tttggcacat caaatcgtca acggcggcat tccagacgcg ctcaaagatg ccgaagtgta
     9661 cgcgctggat atgggctcgc tgttggcggg cacgaaatac cgcggcgact ttgaagcgcg
     9721 ggtcaaatcc gtcttgaaac agctcgaaaa aatcccgcac gccattttgt ttatcgacga
     9781 aatccacacc atcatcggcg caggcagcac cagcggcggc accatggacg cgtccaacct
     9841 gctcaaaccc gcgctggcaa aaggttcgct gcgctgcatc ggcgcgacca cttacgacga
     9901 ataccgcacc attttcgaca aagaccacgc cttaagccgc cgcttccaaa aaatcgacgt
     9961 ggtcgaaccc accgtttccg aaaccgtaca aatcctgcgc ggcttgaagc cgatgtttga
    10021 agccttccac caagtccgct atacgcaagg cgcactcgaa gccgccgccg aactctccgc
    10081 acgctacatc aacgagcgtt tcctgcccga caaagccatc gacgtgatgg acgaagcagg
    10141 cgcggcgcaa cggattctgc ccaaatccaa acagaaaaaa gtcatcggca aagcacaaat
    10201 tgaaaccgtc atcgccaaag ttgcgcggat tcccgaaaaa accgtgtcgc acgacgacaa
    10261 acaagtgctg caattcctcg gtcgcgattt gaaaaacatg gtttacggtc aagaaaacgc
    10321 catcgacgcg ctggttgccg ccgtcaaaat gtcgcgttcc ggccttgccc tgcccgacaa
    10381 accgataggc agcttcctct tctccggccc gaccggcgtg ggcaaaaccg aagccgccaa
    10441 acagcttgcc tactcgctgg gcgtaccgct gcaacgcttt gatatgtccg aatacatgga
    10501 acgccatgcc gtatcgcgcc tcatcggcgc gccaccgggc tacgtcggct ttgaacaagg
    10561 cggccttttg accgaagccg tcaacaaaca gccgcattgc gtattgctct tggacgaaat
    10621 cgaaaaagcc caccccgaca ttttcaacgt cctcctgcaa gtcatggacg caggcaaact
    10681 gaccgacaac aacggcaaga gtgccgattt ccgcaacgtc atcctgatta tgaccaccaa
    10741 cgcaggcgcg gaaagcctca gccgccccag cctcggcttt accgccaagc gcgaacgcgg
    10801 cgacgaaatg caggcaatca acaagctctt cacgcccgag ttccgcaacc gcttggacgc
    10861 gattatcccg tttgcaccct tgtccgaacc catcatcgtc aaagtcgtgg acaaattcct
    10921 gctccagctc gaacaccagc tcctcgacaa aaaagtcgaa gccgaattca cgtcggcatt
    10981 gcacaaatat ctggcggaaa aaggtttcga cccgcaaatg ggcgcgcgcc cgatgcaccg
    11041 cctgattcag gaaaaaatcc gcaaaccgct cgccgacgaa ctcctgttcg gcaaactatc
    11101 cgacggcggc ttcgtgcgga tagactggga tgcggcaaaa gaagaagccg tgttgaagtt
    11161 taagaaaagc aaggtcaaaa taaaaaccgc ctccgcataa aatcaaaaat gccgtctgaa
    11221 aggttcagac ggcattttgt caaatatcgg tccctattcc ggcaaacttc tccacaaacg
    11281 ccgcaatctt ttgaaaaaca ctttgtttct tcgtcagata ttgcgggttg agcggactca
    11341 ttttcggcag ggtttcggtc agttccgtac cgttttcgct ggcatagccg cgtttgagcg
    11401 agccggtcaa atagcgtttg gcggcggttt cgttcaggtc ttcggcggca atcaatcctg
    11461 ccgcttcgtg ccgcattacc tcttgcgcgt aggtgtaaaa ggtttccagt atggcgggaa
    11521 cgtcggggac tttatccaaa tccgtatcgt tgataaaatc cacaatcaga ccctctttgg
    11581 cgcggtggcc gatgctggcg cggatgatgc ggcggatttc ttccaccagc tccgcttttc
    11641 ctttgatttt tttgtgatgc tcgaaaacca gttgcaagat gtaatccaaa ttgatttcct
    11701 gcgatttgag caaatccacc tcaaaaacca catcgtccca atcgattttt gactgttctt
    11761 tctgttcgcc tgctttttgg cggctcagcc agtctcggat gtcgttgtag gcggaacggt
    11821 agtcctgcac cgccctttca gacggcatcg gcacttgccg catttcctgc acgtcttcat
    11881 cgctcaggta gtatttttcc tgaaacgcct tcatcgcatc ttcgtccgcc gcatccacat
    11941 tctgcaactc gcgcagcgcg gcaaattcat cgtagttctg caatacgttt tccgcccgca
    12001 ggtattcgcc gaagagtttg gcaaaatctt ttttgtcttt ttccgtttcg atttcgtcgg
    12061 gatcggggaa acgttcgcgc aattcttttg ccacatccaa atagccgcgc cgcgcttcgc
    12121 cggtctggct gtcgatatag ccgttcatgt attcttcgta gcttttttcc agcaccacgt
    12181 ttttggtgtt tttgtcgccg aacagggtaa tcgcatcaat ggtcgcctgc tccaaatcgc
    12241 ggaagcagac aatattgccg aaggttttgg tggcatcgta aatgcggttg gtgcgagaaa
    12301 acgcctgcat caggccgtga tagcgcaggt ttttatcgac aaacagcgtg ttcagcgtcg
    12361 gcgcgtcaaa acccgtcaaa aacatgccga ccacaatcag caaatctatt tcctgatttt
    12421 tcacccgttt tgccaaatcg cggtagtagt tctgaaaggc tttgctgtcc gtgccgaaat
    12481 tggttttgaa acaggcgttg taatcgttga tggcagcctg caaaaattct ttcgcgctgc
    12541 tgtccatcgc ttccggttca aaggtttcat cgacaatttc accgacggcg ttctgctctt
    12601 cgttggcagc aaaggaaaaa atagtggcca ctttcaacgg gtgcaggctg cctgcctgtt
    12661 gcgttttgaa cgcttcgtaa tagcacttcg ccgcatccac gctgctgacg gcaaacatcg
    12721 cgttaaagcc tttgccgccc gcattcagcc ggtgcgtttt ctgcctgaac tggttcagga
    12781 tatattgcgt gatttcgcgg atgcgttcgg ggtgcagcag ggcttggcgg ttttcggcgg
    12841 cactcagttt cttctcgtcc tgttccgctt ccacggcttt gaactgcggg cgcacatcgt
    12901 tgtaatccac tttgaatttc aatacttttt catcgcggat ggcatcggta atcacataag
    12961 aatgcagctc ccgcccgaac acgcccgccg tggtttccgc gcccaaagcg ttttcgggaa
    13021 aaatcggcgt gccggtaaaa ccgaactggc agaatttttt aaatttcttt ttcaggtttt
    13081 tttgcgcttc gccgaattgc gagcggtggc attcgtcgaa aataaagaca acccgctgat
    13141 ggtaaaccgg cagattatct tcacttttca tcaggttgtt cagcttttgg atggtggtaa
    13201 cgatgatttt gttgtcgtct ttttccaaat tgcgtttcaa gcccgccgtg ctttccgaac
    13261 cgttcacgct gtcggtcgaa aaacgttggt attccttcat cgtctgatag tccaaatcct
    13321 tcctgtccac cacgaagaaa accttgtcga taaatgccga ttccgtcgcc agacgcgccg
    13381 ccttaaagct ggtcagcgtt ttgccgctgc ccgtggtgtg ccaaacatag ccgccgctct
    13441 ccggcttgct ccaattcttc gcctgcgccg agctgttgat tttccacaga atgcgttcgg
    13501 cggcggcaat ctggtacggc cgcataatca gcagcgtatc attcgcatcg aacacgctgt
    13561 aatgcagcaa aacgctcagc aatacgcttt tttgcaggaa cgtggcggta aagtctttca
    13621 aatccttaat cggatgattg tccgaccgcg cccaattcat cgtgaaatcg aagctgtttt
    13681 tgtcgcgctt ggtggtgttg gcgaaatagc gcgtgtccgt gccgttggaa atcacgaaga
    13741 tttgcaggaa tttgaacagc gaattttcgc tgttgaagct ctctttgctg taacggtgca
    13801 cctgattgaa tgcttcgcgc accgccacac cgcgcttttt caattcaatc tgcaccagcg
    13861 gcagaccgtt taccaacacg gtaacgtcat aacggtttgc atgcgtgccc gtctgctcaa
    13921 actggttgat aagctgcaca tggttgcggg caaggttttt cttgtccagc agataaatgt
    13981 ttttcagacg gccgtcatca aaagcgaaat cgtaaatatg gtcgtcgtgg attttgcggg
    14041 ttttatcggt aatattttca gacggtctgt ccagatattc cgtcaaaaac cgcgcccatt
    14101 cgccgtctga aaacgccaca tcgttcagcc gctgcaactg cgcgcgcagg ttttccagca
    14161 gcctgctttg gctgttcaaa tccttgcggt attcgtaacc ctgattctgc aaatcggcga
    14221 ttaactccgc ttccaaccgg ttttccgatt ggtagctgcc cgactgttcg attttttcat
    14281 attggtcgag cacgatgaaa ttcggcgttt cggcgatggg tttggtttcg aggttcatgg
    14341 gtcgtccttt gcagtatcgg gttttaaacg gtttgatgtt cggattgggc tgcctgaaaa
    14401 tgtgcaggct gctttttcag gtagccttag ggaaggcaag cagctgttcg cggtaatatt
    14461 cgtattgttt gcggcgcagg gcgatttcgt gcggcaggcc ttcgctgata gagtgggtca
    14521 ggatatcgaa tttgtctagg atggcggcaa ttttttcctg ttcggggagt ggtgggatgg
    14581 ggatttttaa tttctttaat tctttcatgc taataatagg taaacttgaa gtattaataa
    14641 gttttttgct ctgctccgca ataatgaaaa aataatagaa agcgaaattt atatctaaag
    14701 catccttaaa ttcatcttta attgtaaaat tggtcagttg ttgg
//
LOCUS       DAWKOX010000034        14172 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.034, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000034 DAWKOX010000000
VERSION     DAWKOX010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14172
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.034"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            235..1194
                     /locus_tag="WJK78_000742"
     CDS             235..1194
                     /locus_tag="WJK78_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597693.1"
                     /translation="MYQNYDIVILSLGNGLLTRFFRNSSKLNLTLPIVITLFPGVIFG
                     DSESIITRLGANILLFNNYYDYQIGNKFKERYNLSCTNILYGYPILRKKHHCSDGNKV
                     YFIDQVKIPDGKKERLLILKKLIALANRYPHKDLVLLLRVHQNDITVHEDKYSYAELA
                     KNMKLPDNFKIERKRTQDALQEMGYCLSFSSTMLFEAESCGIPIGVISDLGVDKKYAN
                     THFKDSGVLVNLDTVDLDSPNTINPTWAELYTNPDSLSSKEFNQLLEVTSTQPPSFDN
                     YFIAVNDVQPVSMVLLRKFKKLIYHPKQFFVDSKLYKLIKFTK"
     gene            1242..1910
                     /locus_tag="WJK78_000743"
                     /pseudo
     CDS             1242..1910
                     /locus_tag="WJK78_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464259.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase"
     gene            1924..2940
                     /gene="galE"
                     /locus_tag="WJK78_000744"
     CDS             1924..2940
                     /gene="galE"
                     /locus_tag="WJK78_000744"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ7597694.1"
                     /translation="MNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL
                     KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPIKYYDNNVS
                     GSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL
                     TDIQKADPRWSMILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLAVF
                     GDDYPTPDGTGMRDYIHVMDLAEGHVAAMQAKSNVAGTHLLNLGSGRASSVLEIIRAF
                     EAASGLTIPFEIKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMMEDSWRWVSNHPN
                     GYDD"
     gene            3036..4097
                     /gene="rffG"
                     /locus_tag="WJK78_000745"
     CDS             3036..4097
                     /gene="rffG"
                     /locus_tag="WJK78_000745"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HEZ7597695.1"
                     /translation="MKKILVTGGAGFIGSAVVRHIINDTQDAVVNVDKLTYAGNLESL
                     ESLANHPRYAFEQVDICDRAALDRVFAEHQPDAVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWHDMPSEKKAAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLEELVPN
                     KPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVEWYLNN
                     QTWWSRVLDGSYNRERLGS"
     gene            4310..5185
                     /gene="rfbA"
                     /locus_tag="WJK78_000746"
     CDS             4310..5185
                     /gene="rfbA"
                     /locus_tag="WJK78_000746"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ7597696.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            5240..5779
                     /gene="rfbC"
                     /locus_tag="WJK78_000747"
     CDS             5240..5779
                     /gene="rfbC"
                     /locus_tag="WJK78_000747"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ7597697.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            5941..7989
                     /locus_tag="WJK78_000748"
     CDS             5941..7989
                     /locus_tag="WJK78_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ7597698.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPEINRL
                     VQTQRRATRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMGIYFNAEAPSRLEHILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGNSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYH
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQY
                     ADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGCFAKKLGKIKQLYRSFK
                     "
     gene            8126..9385
                     /locus_tag="WJK78_000749"
     CDS             8126..9385
                     /locus_tag="WJK78_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide modification protein
                     LipB"
                     /protein_id="HEZ7597699.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            9752..11158
                     /locus_tag="WJK78_000750"
     CDS             9752..11158
                     /locus_tag="WJK78_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ7597700.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYTEAAFVLG
                     DHLLQNGHPEQALPWLEAAAAQRHPKALFTLLQQREHNGTPTGQLLNEYAWLSEQGHL
                     EAQLILMRYHTQRNDPQSLYWAELAAAQYAAPAYYHLARHHQRQGDVATAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEQAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            11376..12590
                     /gene="gltS"
                     /locus_tag="WJK78_000751"
     CDS             11376..12590
                     /gene="gltS"
                     /locus_tag="WJK78_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ7597701.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            12689..13705
                     /locus_tag="WJK78_000752"
     CDS             12689..13705
                     /locus_tag="WJK78_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ7597702.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSAALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            13716..13913
                     /locus_tag="WJK78_000753"
     CDS             13716..13913
                     /locus_tag="WJK78_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597703.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            13931..14080
                     /locus_tag="WJK78_000754"
     CDS             13931..14080
                     /locus_tag="WJK78_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597704.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFLCVSYADVSTHKTAHKAL
                     PYVPS"
BASE COUNT         3770 a         3581 c         3271 g         3550 t
ORIGIN      
        1 ttaatatcta atatttaaaa tacaatgaat aaaaaacgag tcctattaat tgctagttat
       61 gattcttttt tgaatactgg atatgctgtt gcaaaagaaa ttaactattc aacaatcgat
      121 atttatatcc accaaacaaa aaaaaatatt ctttcggaat cacaattaag tttaaatggg
      181 ctttctttaa aagaaatcaa tttttttcat attgatgatt atttcgacaa attaatgtac
      241 cagaattatg atattgttat tctatcatta ggtaatggtt tactgacgcg tttttttcgg
      301 aatagtagca aacttaattt aacattacct atagtaatta ctctatttcc aggggtaatt
      361 tttggtgatt cagaaagtat tataactagg ttaggtgcta atattttatt gttcaataat
      421 tattatgatt accaaatagg caataagttc aaagaacgtt acaacttatc gtgtacaaat
      481 attttatatg gttatcctat cctacgaaaa aaacaccatt gctctgatgg caataaagtt
      541 tatttcattg atcaagtaaa aattccagat ggaaaaaaag aaagattatt aattctaaaa
      601 aaattaatag cactggctaa tcgctatcca cataaagatt tagtactatt attacgtgtc
      661 catcaaaatg atatcacagt acatgaagat aaatactctt atgctgaatt agcaaaaaat
      721 atgaaattgc ctgataattt taaaatagag agaaaacgga cacaagatgc cttacaagaa
      781 atgggatatt gtttatcatt ctcttcaaca atgttatttg aagctgaaag ctgcggaatt
      841 cctattggtg tcattagtga tttaggggtt gacaagaaat atgccaatac acatttcaaa
      901 gatagtggtg ttttggttaa tttagatacg gtagacttgg actctccaaa taccattaat
      961 ccaacttggg ctgaactata tactaatcca gatagcctct cttcaaaaga gtttaaccaa
     1021 ttattagagg ttacttctac tcaaccacct agttttgata attattttat tgcagttaat
     1081 gacgttcagc ctgtatctat ggttctgtta cgtaaattta aaaagcttat atatcatcct
     1141 aagcaattct ttgttgattc aaaactatat aaattaatta aatttactaa ataattttta
     1201 ctatgggttg ccttatttat ttcaaaggag tgacataaaa aatgcaaaaa attcgtaaag
     1261 ctgtattccc tgtagctggc atgggaaccc gattcttacc tgccacgaaa gccagcgcta
     1321 aagaaatgct gccaatcgtg gacaaaccgt taattcaata tgctgcggaa gaagccgttg
     1381 ccgcgggttg tactgaattg atttttatca ccggccgtaa taagcgtaat attgaagacc
     1441 acttcgataa agcctatgag ttggaaactg aactggaaat gcgtgaaaag cataaattgc
     1501 ttggctatgt gcaaaaaatt ctgcctgatc atgtcagctg tattttcatt cgtcaggcag
     1561 aagctttggg cttgggtcat gcggtattat gcgcccgtcc tgctgtcggt aatgagcctt
     1621 ttgccgtgat tttggccgat gacttgattg atgcaccaca aggcgcactc aagcagatgg
     1681 tagatattta caatcaaagc ggcaacagca ttttaggggt agaaacagtc gatccttcgc
     1741 aaaccggttc atacggcatt gtcgaagtgg aacagctgaa aagctatcag cgtgtaacca
     1801 atattgtgga aaaaccaaag cctgaagatg cgccgtcaaa tttagcggta gtcggccgtt
     1861 atattttgac accgcgtatt tttgatttgc tgactaatct acctcgtggt gaaggaaaac
     1921 gtgatgaaca ttctcgttac cggcggcacc ggttttatcg gctcgcacac cgttgtttct
     1981 ttgctgaaaa gcggtcatca agtcgtgatt ttggataacc tatgcaattc cagcatcaat
     2041 atcctgccac gcttgaaaac gattaccggc caagagattc cgttttatca aggcgatatc
     2101 cgcgatcgtg agattttgcg ccgtattttt gcggaaaacc gcattgattc ggtgattcat
     2161 tttgccggct tgaaagcggt gggtgaaagt gtggccgagc cgataaaata ttatgataat
     2221 aatgtttccg gcagcttggt gttggcggaa gaaatggcgc gtgcgggcgt gtttagcatt
     2281 gtgttcagtt cttcggcgac ggtttatggc gatccgggca aagtgcctta taccgaggat
     2341 atgccaccgg gcgacaccac cagcccttac ggcgcatcga aatcgatggt tgagcgcatt
     2401 ctcactgaca ttcaaaaagc cgatccgcgc tggagcatga ttttgttgcg ctatttcaac
     2461 ccgattgggg cgcacgaaag tggtttgatt ggcgagcagc caaacggcat cccgaataat
     2521 ttgttgcctt atatctgcca agtggcggca ggcaaactgc cgcaattggc ggtatttggc
     2581 gatgactacc ctacccctga tggcacgggt atgcgcgact atattcatgt gatggatttg
     2641 gcagaaggcc atgtcgcggc tatgcaggcg aaaagcaatg tagcaggcac gcatttgttg
     2701 aacttaggtt ccggccgcgc ttcttcggta ttggaaatca tccgcgcatt tgaagcggct
     2761 tcgggtttaa ccattccatt tgaaatcaaa ccgcgccgcg ccggtgattt ggcgtgcttc
     2821 tatgccgacc cttcttatac gaaggcgcaa atcggctggc aaacgcagcg tgatttaacc
     2881 caaatgatgg aagattcatg gcgctgggta agtaatcatc cgaatggtta tgatgattaa
     2941 gtcatgaaat tgagaggccg tctgaagttt cagacggcct ttgtttgcga tttatagtaa
     3001 aatttacctt atcattttgg cgattaatat tcatcatgaa aaaaatcctt gtcaccggcg
     3061 gtgccggttt tatcggttcg gcggttgtac gccatatcat caacgatacg caagatgcgg
     3121 tggtgaatgt ggataagctc acgtatgcgg gcaatttgga atcgctggaa tctttggcca
     3181 atcatccgcg ctatgcgttt gagcaagtcg atatttgcga ccgcgcggca ctggatcgtg
     3241 tgtttgccga acaccagccg gatgcggtga tgcacttggc agcagaaagc catgttgacc
     3301 gcagtattga tggcccagcg gcatttattg aaaccaatat tgttggtact tacacgcttt
     3361 tggaagcggc gcgcgcgtat tggcatgata tgccgtctga aaaaaaagcg gctttccgtt
     3421 tccatcatat ttcgactgat gaagtgtatg gcgatttgca cggcacggat gatttgttta
     3481 ccgaaaccac gccttacgcc ccttccagtc cttattcggc ttccaaagcc tccagcgacc
     3541 atttggtgcg cgcatggctg cgtacttacg gcctgccgac cattgtgacc aattgttcta
     3601 ataactacgg cccttatcat tttcctgaaa aactgattcc actgatgatt ctgaatgcgc
     3661 ttgatggcaa accgctgccg gtgtatggcg acggtatgca gattcgtgat tggctgtttg
     3721 ttgaagatca tgcgcgtgcg ctgtatcaag tggtcacaga aggcgaaatc ggcgaaactt
     3781 acaacattgg tggccacaat gaaaaagcca atattgaagt ggtgcgcacc atttgcgccc
     3841 tgctggaaga attggtgccg aacaaaccgc aaggcgtggc gcgttatgaa gatttgatta
     3901 cctatgtcaa agaccgcccc ggccatgatg tgcgctatgc gattgatgcc gcaaaaatcg
     3961 gccgtgagtt gggttggcag ccgcaagaaa cttttgaaag cggcatccgc aaaacagtgg
     4021 aatggtattt aaacaatcaa acttggtggt cgcgcgtgtt agacggcagc tacaatcgtg
     4081 aacgcttagg cagttaaata gagacctttg caaactcccc atctttggca catttcttcg
     4141 ttatgcgctg ctcgaaagct tgcctatctt tgtgatatgt ctgcgctttc tgcgctgcta
     4201 taacttcgaa ctgtactcaa atctgtggct ttgcaaaggc ctcaaataat aaaaatacgt
     4261 tcagacggca tgaaggccgc ctgaaaaact acataaggaa agtaaactga tgaaaggcat
     4321 tattctcgca ggcggcagcg gtatccgcct ttacccgatt acccgcggcg tatcaaagca
     4381 attactaccg gtgtacaaca aaccgatgat ttattacccc ttgtcggtgt tgatgttggc
     4441 cggaatccgc gatgtgctgg tgattaccac ccccgaagac aacgatgctt tccgccgctt
     4501 actgggtgat ggcagcgatt tcggtattca aatttcctac gccatccaac ccagccccga
     4561 tggtttggcg caagcctttt taattggtga agaatttatc ggcgatgatt cggtgtgttt
     4621 ggtgttgggc gacaatattt tctatggcca gcatttcagc caatccctga aagaagccgc
     4681 cgcttccgtg gaaaccaaag gtgctaccgt attcggctat caagtgaaag atcccgagcg
     4741 tttcggtgtg attgagtttg atgagaattt caaagccctg tcaatcgaag aaaaaccgaa
     4801 acaacctaaa tccgattggg cggtaaccgg cctctatttc tacgataatc gcgtagtcga
     4861 gtttgccaaa caagtgaagc cgtctgaacg cggcgaattg gaaattacca ccttgaatca
     4921 aatgtatttg gacgatggtt cgctcaatgt ccaattgctc ggtcgcggtt tcgcatggct
     4981 tgataccggc acacacgcca gcctgttgga agcagcctcg tttgtcgaaa ccattgaaaa
     5041 cattcaaaac ctacaagtcg cctgtttgga agaaatcgca tggcgtaatg gctggttgag
     5101 cagcgaagaa atcagaaact tggcaaagcc aatgtgtaaa aatgaatatg gccgctattt
     5161 attgcgcttg gttggcaaag attaagaggt tgcttttacc agttttcagg ccgtctgaaa
     5221 cgctttttag gaaaacatga tgaatatcat cgatacccgc attcccgatg tcaaattgct
     5281 cgaacccaaa gtcttcggtg acgagcgtgg tttttttatg gaaaccttcc gtgatgaatg
     5341 gttccgccaa aatgtagccg agcgcacttt cgtgcaggaa aaccacagca aatccaccca
     5401 aggcgtatta cgcggtttac attatcaaac cgaaaataca caaggcaaac tggtgcgcgt
     5461 ggtatcaggc gaagtctttg atgttgccgt ggatatgcgt cgtgatagtc ctactttcgg
     5521 ccactgggtc ggtgaggttt tatcggcaga caacaaacgc caattatggg tgccggaagg
     5581 gtttgcccat ggattttatg tgttgagcga tgaagcggaa ttcgtctaca aatgcaccga
     5641 ctattacaac ccgaatgcgg aacattccct aatttggaat gatgccacag tgggaatcga
     5701 ctggccttta ttgggagaac caagcctatc ggccaaggat ttggcaggca agatgcttgc
     5761 tgaagcggcc acattttaat tttcactttt aggtcatcgt gggtaatttg tagcaagatg
     5821 acctaatttt taccagctag cctactaact aaatttctac tatatttaaa tagtcagaaa
     5881 atttacacaa aatctgttaa taagatatta tattgtcagt aatatttttt cctatttatt
     5941 gtgattcctg cctacattcc tcttcgctct ttcggtatac gtaaaattcc gaatattacg
     6001 caatttctac cggaatattc acttaacaaa accgtattca acgcccaaac catcattggc
     6061 tggggcttac gcccgaccac ccaccaagca cgtgcttttg cacaatcaca tggcttgccg
     6121 tttgtagcct tggaagacgg ttttttacgc tcactgggct taggcgtggc cggttatccg
     6181 cccttcgcac tggtttacga cgatatcggc atctattacg acacaacccg cccatcgcgt
     6241 ttggagcagt tgattttagc cgcaaacatg ccgtctgaaa tgcttaacca agcgcagcag
     6301 gccattgatt tgattttgac gcaccgtttg tctaaatata accatgctct ggatttttca
     6361 gacggcctcg tacaagacag caaaaacatt gttttggtaa ttgatcaaac tttcggcgat
     6421 atggcgattc aatatggcgg cgcagatgaa gccacattcc gccaaatgtt tcagacggcc
     6481 ttagccgaaa atcctgatgc ggaaatctgg gtcaaaaccc atcccgatgt attgagcggc
     6541 aagaaacagg gttaccttac tgatttggca cagcagccgc gtgtgcgttt attggctgaa
     6601 gacattaatc cgatttcgct gctgcaagcg gtggacaaag tgtattgcgt gacctcgcaa
     6661 atgggttttg aagccttgtt gtgcggcaag cctttggtaa cgtttggttt gccgtggtat
     6721 gccggctggg gtgtaagcga cgaccgccat cctgaaatca accgccttgt tcaaacccaa
     6781 cgccgcgcca cccgcaactt gctgcagctc ttcgccgcag cctatctgca atacagccgc
     6841 tacctcaacc ccaataccgg cgaagcaggc agcctctttg atgtcatcga ctatctggcg
     6901 acggtcaaac gtaaaaacga caaattgcgt ggcgagttat attgcgtcgg tatgtctttg
     6961 tggaaacgcg cggttgccaa accgttcttt aacgtaccct cttgccgtct gaaatttatc
     7021 tcttccaccc aaaaactggc aagggtcaaa ctgtccgacg atgcacgcat cctggcttgg
     7081 ggcaacggca aagaggccat cgtccgcttt gccgaacaac accacatccc cctgctgcgc
     7141 atggaagacg gctttatccg ctcggtcgga ctcggctcca acttagtgcc gccgctgtcg
     7201 ctcgttaccg acgatatggg tatttacttc aatgccgaag ccccatcccg ccttgaacac
     7261 atcctgcaaa accaaaactt cgacgatcaa gactttcaga cggccttgaa gttgcaaaaa
     7321 atgctgaccg aaaaccatat cagcaaatac aacgtcggca actcagactt taccgcccca
     7381 tcaaccgaca aaaccgtgat cctcgttccc ggtcaggttg aggatgatgc gtctatccgc
     7441 tatggttcgc cccaaatcta tcacaatctg gatttgctcc gtaccgtacg cgaacgaaac
     7501 cccaatgcct atatcatcta caaaccgcat cccgatgtag tcagcggtaa ccgcatcggc
     7561 catatttccc ctgaagatgc tgcacgatat gccgaccaaa ccgccgaaca agccgacatc
     7621 ctgacctgtc tccaatacgc agacgaaata cataccatga cttcgctgac cggttttgaa
     7681 gccttgttgc gcggcaaaaa agtcagctgc tacggcctgc ctttttacgc aggctggggg
     7741 cttacccaag atctgctccc catcccgcgc cgtagccgca gacttgagct ttggcagctg
     7801 attgccggca cgctcatcca ctatcccgac tacatccacc ccgaaaccca tcaggccata
     7861 aatgcggaaa ccgcagccca aatcctgata cgacaaaaaa atatgcaaaa aaacaacaac
     7921 ggattacatc gcgggtgctt tgccaaaaaa ttaggtaaaa tcaaacaact atatcgatct
     7981 ttcaaataaa taccatcaaa gttaacgatg cgtcataaac ttgcctctat tgcggcatca
     8041 ttgcctttgc atcgttaatt ctcttggcgt atgcttgaaa gttcaaccta aaactattac
     8101 ataaaaaaca aaaccacatt gcaacatgaa acagaccgtc ctcaaaaata acctgcaaaa
     8161 cctgcttgaa agcgcagaaa atatcctgct gcttcaaggc cctgtcggcg atttttttct
     8221 gcgccttgcc gactggctga ctgcaaacgg caaaaccgta cataaattca actttaatgc
     8281 aggcgacgac tatttttatc cgcccactca agcgcatacc gttgttttta acgacaacta
     8341 cgatgccttt cctgagtttt tgcaagaata catcactcaa catcacatcc aggccgttgt
     8401 ctgctttggc gacacacgcc cttatcacgt cattgcaaaa cgcattgcaa acgaaaacca
     8461 agccagtttc tgggcgtttg aagaaggcta tttccgcccc tactacatca ccttagaaaa
     8521 agacggcgtc aacgcatttt ccccgttgcc gcgccgtgcc gacttttttc ttgaacaatt
     8581 ccctaagctt gcccagcaag aatataaagc gccaacgccg gtacacggcg gttttacgcc
     8641 catggcaaaa aacgctatcc gttactatat cgagttgttc cgcaatccac gcaaataccc
     8701 cgactacatc caccaccgcg cacccaatgc cggccattac ctcaaaccgt ggtcgctctc
     8761 catcctcaag cgtttgaact actatattga agacatccaa atcgccaaac gtgtggaagc
     8821 aggcaaatac ggcaagtttt ttattgttcc cttacaggta ttcaacgaca gccaagtccg
     8881 tatccattgc gactttccca gcgtccgcag cttcctgctc catgttttga gttcatttgc
     8941 cgagcacgcg cctgccgata ccaacatcat catcaagcat catccgatgg accgcggttt
     9001 tatcgactac tggcgcgaca ttaaacgctt tatcaaagaa caccccgaac tcaaaggccg
     9061 cgtgatttat gtccatgatg tccccctgcc cgttttcctg cgccacggtc tcggcatggt
     9121 caccatcaac agcaccagcg gcctgtccgg actgattcac aatatgccag ttaaggttct
     9181 cggccgtgcc tattatgata ttcccggcat tactgaccaa aataccttgg cagaattttg
     9241 gaatcatccg acaccgcctg acaaagagct gttccatgcc taccgaatgt accacctcaa
     9301 cgtgacccaa attaacggca acttctacag tcaggtgttt ttccccaaca aaaaaacctc
     9361 caactcttcc acaccagtaa tctgacttag cgaaggaagt tcaggccgtc tgaaaacatt
     9421 tcagacggcc tgaaacaatc aataccttag ctactgccat gtaaataaaa cacaaaaatc
     9481 tgcatttatc attaacaata aattacaaaa acagtataat gaccgagctg ccatgagcgc
     9541 ataccgactc aacctgagcc ctttataaca cacaaaatat ggatgtatcc ccaggcaaaa
     9601 caatataaca agccaaacat cctaaagata agccggcaag gaaatacact ctgcaaaacg
     9661 atgccgagca atatttttac aaagccctca accggtatcg ccgcccatat gccgcagcat
     9721 ccgtcttcca ctttatatcc gcccgcaaac catgaccgcc gctcctgata tcctataccg
     9781 tcaagccgcc gcccttttgg aacaatccaa taccgcccaa gccctgcccc tgctgcaaca
     9841 ggccgcagag cagggatata cggaagctgc ttttgtattg ggcgaccatc tgctgcaaaa
     9901 cggtcatccg gagcaggcac ttccatggtt ggaagccgcc gcggcccaac gccatcccaa
     9961 ggcactcttt accctgctgc aacaacgcga acacaacggc accccgaccg gacagcttct
    10021 taacgaatac gcctggctga gtgagcaagg tcacctcgaa gcccaattaa ttctcatgcg
    10081 ttaccacacg cagcgcaacg atccacaatc gctctactgg gcggagcttg ccgctgccca
    10141 atatgccgca cctgcgtatt accatttggc acgccatcat caacgccaag gcgacgttgc
    10201 aacagctatc gaacaatacg aaaaagcggc agcgctcggc gtgactgcag cctgctggca
    10261 actcggtcaa atctacttct acggcacagg tgtcagcccc aaccacgcac aagccgaaca
    10321 ctatctcgaa caagccgcgc aagccggcca catcgccgca caaaccctgc tggccgacct
    10381 tcttgctgcc caacgcaaac ccgaagcctt agaatggtat cgtcgtgccg ccgacaaaga
    10441 gcaagcggaa gcacaggcca agctggctca atacgccctg accggcgaac tttccgaacg
    10501 cgatccgttt caagcggcac gatatgccaa agccgccgct gagaaaaacc atcctgaagc
    10561 cctgaaaatc atgggcgacc tctaccgcta cggtctcggt atcaaagccg acaaccatat
    10621 cgcgcaagat tactaccacc gtgccgccgc gctgggttct gccgccgcag cacaaaaact
    10681 catcagcgac gccgcgctgt accatccgca acaatacgaa caaatcaaaa ctgccgccct
    10741 gcaacaacaa caaaccgaaa ccatctaccg tttggcggaa gcacaagcct gcgccatcgg
    10801 ccgtcccgcc gactataatg ccgcacgcaa aaattacatg gaagctgctg agttccacca
    10861 taaaaacgcg gcggctgcct taggccgcat ctaccattac ggcctcggta cggcgcaaga
    10921 tcctcgggcg gctgcacact ggtacgccat cgctgccgaa caaaaccacc cttccgccca
    10981 ataccacctc gcctgttttt actatcacgg acaaggtgtc ggctgtcatg ttccgaccgc
    11041 ctgctactgg ctgcaggctg ccatcagcaa cggccacact tcggccgaat cattaatatc
    11101 cctattagaa caatggcgac gcgaagcaca ccatgccatc ggacaaaagg ccgtctgaaa
    11161 agatttacac tcgcattttt tgacaatctt taactattcc cctaatattt gccagttatt
    11221 tttcacggac acgccattgt tttcatttct ttctgaaaac accttgtccg cgcatcaata
    11281 ccatgacact cggcggataa cgccaagcgt tgaaacacac tacatccgga acaaaaacgg
    11341 atgctcggaa aaatatttct aggaggtgaa acaacatgga atgggaattc aacagttatt
    11401 acacactgat tgccgccacg ctcgtgttgc tggttggtaa atttctggtt caaaaaatca
    11461 aattcttacg agacttcaat attcccgagc cggtcgctgg cggtttggtt gccgcgatta
    11521 tcctgtttgc gctgcacgag gcgtacggcg tgagcttcaa atttgagaaa ccgctgcaaa
    11581 atgcgtttat gctgattttc ttcacgtcca tcggcttgag cgcggatttt tcccgtttga
    11641 aggcgggcgg tttgccgcta gtggttttta ccgcgattgt gggcggattt atcttggtgc
    11701 aaaactttgt cggggtcgga ctggctacgg ctttgggttt ggacccgctc atcggtctga
    11761 ttaccggttc ggtgtcgctg acgggcggac acggtacgtc aggtgcgtgg ggacctaatt
    11821 ttgaaacgca atacggcttg gtcggcgcaa ccggtttggg tattgcatcg gctactttcg
    11881 ggctggtgtt cggcggcctg atcggtgggc cggttgcgcg ccgcctgatc aacaaaatgg
    11941 gccgcaaacc ggttgaaaac aaaaaacagg atcaggacga caacgcggac gacgtgttcg
    12001 agcaggcaaa acgcacccgc ctgattacgg cggaatctgc cgttgaaacg cttgccatgt
    12061 ttgccgcgtg tttggcgttt gccgagatta tggacggctt cgacaaagaa tatctgttcg
    12121 acctgcccaa attcgtgtgg tgtctgtttg gcggcgtggt catccgcaac atcctcactg
    12181 ccgcattcaa ggtcaatatg ttcgaccgcg ccatcgatgt gttcggcaat gcttcgcttt
    12241 cgcttttctt ggcaatggcg ttgctgaatt tgaaactgtg ggagctgacc ggtttggcgg
    12301 ggcctgtaac cgtgattctt gccgtacaaa ccgtggtgat ggttttgtac gcgacttttg
    12361 ttacctatgt ctttatgggg cgcgactatg atgcggcagt attggctgcc ggccattgcg
    12421 gtttcggctt gggtgcaacg ccgacggcgg tggcaaatat gcagtccgtc acgcatactt
    12481 tcggcgcgtc gcataaggcg tttttgattg tgcctatggt cggcgcgttc ttcgtcgatt
    12541 tgattaatgc cgcgattctc accggttttg tgaatttctt taaaggctga ttttccgcct
    12601 ttccgacaaa gcacctgcaa ggtttaccgc ctgcaggtgc ttttgctatg atagccgcta
    12661 tcggtctgca ccgtttggaa ggaacatcat gtatcggaaa ctcattgcgc tgccgtttgc
    12721 cctgctgctt gccgcttgcg gcagggaaga accgcccaag gcattggaat gcgccaaccc
    12781 cgccgtgttg caaggcatac gcggcaatat tcaggaaacg ctcacgcagg aagcgcgttc
    12841 tttcgcgcgc gaagacggca ggcagtttgt cgatgccgac aaaattatcg ccgccgccta
    12901 cggtttggcg ttttctttgg aacacgcttc ggaaacgcag gaaggcgggc gcacgttctg
    12961 tatcgccgat ttgaacatta ccgtgccgtc tgaaacgctt gccgatgcca aggcaaacag
    13021 ccccctgctg tacggggaaa ccgctttgtc ggatattgtg cggcagaaga cgggcggcaa
    13081 tgtcgagttt aaagacggcg tattgacggc agccgtccgc ttcctacccg tcaaagacgg
    13141 tcagacggca tttgtcgaca acacggtcgg tatggcggcg caaacgctgt ctgccgcgtt
    13201 gctgccttac ggcgtgaaga gcatcgtgat gatagacggc aaggcggtga aaaaagaaga
    13261 cgcggtcagg attttgagcg gaaaagcccg tgaagaagaa ccgtccaaac ccacgcccga
    13321 agacattttg gagcacaatg ccgccggcgg cgatgcgggc gtaccccaag ccgcagaagg
    13381 cgcgcccgaa ccggaaatcc tgcatcctga cgacggcgag cgtgccgata ccgttaccgt
    13441 atcacgggga gaagtggaag aggcgcgcgt acaaaaccag cgtgcggaat ccgaaattac
    13501 caaactttgg ggaggactcg ataccgacgt gcaaaaagag ttggtcggcg aacaacgcaa
    13561 gtgggcgcag gaaaaaatca gcaactgccg acaagccgcc gcgcaggcag accggcagga
    13621 atacgccgaa tacctcaaat tgcagtgcga cacgcggatg acgcgcgaac ggatacagta
    13681 tcttcgcggc tattccatcg attaggggca aaccgatgaa taccgtccca aaaagcagga
    13741 ttcccgtcaa accgctgccc gaaaaaacca cagacgaagc caaagtcgaa aaatggcggc
    13801 agctcggtgc ggaacacggt ttgtcgggcg aatgggcagt tgccgccaga ttgggcgaaa
    13861 acggttttac cgaagaacag atggaaaata tcgccaacct gttcggcaga taaagggaaa
    13921 attgacggaa atgccgtctg aaaccctgtt atcggtttca gacggcattt tgaccaatac
    13981 ggtacgcagg cgcaaaacag ccggcttttt atgtgtttcc tatgctgatg tttcaacaca
    14041 caagacggca cataaagcgt tgccctatgt gccgtcctga ttcggaaggg gttacgcccc
    14101 tcccaaatat agtggattaa caaaaaccag tacggcgttg cctcgcctta gctcaaagag
    14161 aacgattctt ta
//
LOCUS       DAWKOX010000035        13912 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.035, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000035 DAWKOX010000000
VERSION     DAWKOX010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13912
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.035"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(122..1447)
                     /locus_tag="WJK78_000755"
     CDS             complement(122..1447)
                     /locus_tag="WJK78_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ7597705.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPAPAGTTVAGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMQQNPQRLAEVLGQNPSYIFF
                     RELTGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1659..2498
                     /locus_tag="WJK78_000756"
     CDS             1659..2498
                     /locus_tag="WJK78_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ7597706.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGIGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKQQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIVVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVMTWFLCGSRPSETLTRKE
                     ELK"
     gene            2495..3661
                     /locus_tag="WJK78_000757"
     CDS             2495..3661
                     /locus_tag="WJK78_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ7597707.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRIHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3925..5190
                     /gene="efeB"
                     /locus_tag="WJK78_000758"
     CDS             3925..5190
                     /gene="efeB"
                     /locus_tag="WJK78_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ7597708.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKRGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5262..5591)
                     /locus_tag="WJK78_000759"
     CDS             complement(5262..5591)
                     /locus_tag="WJK78_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ7597709.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVL
                     DANGAVLQNGDTVILIKDLKVKGSSMVIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(5668..7038)
                     /gene="glmU"
                     /locus_tag="WJK78_000760"
     CDS             complement(5668..7038)
                     /gene="glmU"
                     /locus_tag="WJK78_000760"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ7597710.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMLGRVIDTAA
                     ALNPQNICVVIGHGKDQVLNAVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADAA
                     QKAVKEINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVELGDNVEIGANCVIKNAKIGANSKIAPFSHLESCEVGENNRIGPYARLRPQ
                     AKLAADVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNIEDNKLALARARQTVIEGWMR
                     PEKDKQ"
     gene            complement(7093..7365)
                     /locus_tag="WJK78_000761"
     CDS             complement(7093..7365)
                     /locus_tag="WJK78_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HEZ7597711.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPIYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(7341..8072)
                     /locus_tag="WJK78_000762"
     CDS             complement(7341..8072)
                     /locus_tag="WJK78_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ7597712.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGLFTLINRAMTRYMTRRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDEVLTRLHGMPETQNTLSR
                     LKGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKVHDLPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTTPRKYERMLCVKPSLS"
     gene            8131..9132
                     /locus_tag="WJK78_000763"
     CDS             8131..9132
                     /locus_tag="WJK78_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7597713.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9226..10074
                     /locus_tag="WJK78_000764"
     CDS             9226..10074
                     /locus_tag="WJK78_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ7597714.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10100..10585
                     /locus_tag="WJK78_000765"
     CDS             10100..10585
                     /locus_tag="WJK78_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ7597715.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10687..12255)
                     /gene="msrAB"
                     /locus_tag="WJK78_000766"
     CDS             complement(10687..12255)
                     /gene="msrAB"
                     /locus_tag="WJK78_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ7597716.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKAAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12400..13665
                     /gene="ftsY"
                     /locus_tag="WJK78_000767"
     CDS             12400..13665
                     /gene="ftsY"
                     /locus_tag="WJK78_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ7597717.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKEAVAEMLSEAEEAAEKAAEQVEAAKEAIAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         2993 a         3568 c         4169 g         3182 t
ORIGIN      
        1 aatttgatcc actataattc cgtcaaataa gaaaggaatt ttgtgcctgc ggtatcgcaa
       61 aacttcgcct taatgcgccc gattgcctag ggatgggctt cagacggcat tgttttccgg
      121 tttacgggcg gtattcgggc ttcataccgt tgggcagaag ctgccagaca tatcccgtgg
      181 ttttctgttt gccggcaagt tcgccggctt cgtcgccgta accccaaaaa taatccacgc
      241 gcaccgcgcc tttaatcgcg ctgccggtat cctgcgccat aatcaggcgg ttgagggctt
      301 tgcgggtaac cggatgggcg gtggcgacaa ataagggcgc gcccaaggta atgtagtgcc
      361 ggtcgactgc gccggcgtac tcgcccatca gcggcgtgcc cagtgcgccg acagggccgt
      421 cattgctgct tccggtaagc tctcggaaaa agatatagct ggggttttgc cccaaaactt
      481 cggcgaggcg ttgcgggttt tgctgcatat aggctttgat gccctgcatc gaggtctgcc
      541 cgagcttgag gtagcctttg tccgccatat agcgtccgat ggaaacgtag ggatgttcgt
      601 ttttgtcggc atagccgatg cggatgtatt tgccggacgg ggttttcaga cggcccgagc
      661 cttggatgtg cataaaaaaa agttcgacgg ggtcttcggc gtaaccgagt atcggggctt
      721 tgccgtcaag cgcgccgccg ttgatttggt tgcgcgtgtg gtaggggagg aagcggcttc
      781 cttcaaacct gcctttgatt gccgttgtgc gcgcggtgat ggggaatcgg gagaggtcgg
      841 cggtgtgcgt gccgccggca ttgtcgattg tgccgctgtt tttccccgtc tgcctgatgc
      901 ggacaagggc ttttccgctc cgcaaaccgg caggcagggg gacggagata aaatcgtcgg
      961 gaataccgta aatcgggaag cgggcttgtg ccgtccgcct gtcgtcgccc ttcagcaccg
     1021 gctcgtaata gccggtaacc gtaccggcaa ggcttccgtt gcctgcaacc tgccacggcg
     1081 tgaaatagcg ttcaaaaaac tgttttgcct gaaaggaatg gacgggggtt tgaaaggctt
     1141 gggcacacac atcctgccag ccttggcggt ttttcaaatt ggcgcagccg aggcggaagg
     1201 attgcaggct tttggcgaaa tcctgcgccg cccagtgggg cagggacagg tgcggcacaa
     1261 cggtataaac ggccccgccg ccggcaaccg tcgttccggc gggggcgggg atgccgaccg
     1321 gccggtccgg gccgttgatg acggatgtgt cgggttgcgg aaaggtttgg atgctcttgc
     1381 tttggcaggc ggcgaggatg gcggcggcga tgccgcacag ggcggcgcgg aacaggtatt
     1441 ttttcataat ggacaatgtt gtcagcagta ataaaaaaag atggtttcgg gcggcgttgc
     1501 ggcagccgtg gagaggggat tttaacacag ggcgcagctg cagcctgcgg aactttccgc
     1561 cgcgcggtac tgcagataaa aataacttgc atttgtattt acaagcaatg aaaatattcc
     1621 gataatatat tattcatcat ccttgttcgt tcgcgtttat gctggtcgct tttttaatta
     1681 tgttgcgcga gggtatcgaa gccgcgctca tcgtcggcat cgttgccggt tttctgaaac
     1741 agtccggaca ttccaaactg atgcctaagg tctggttcgg ggtcgtcctt gcttctttga
     1801 tgtgtttggg catcggatac ggcatccatt cggcaacggg cgagattccc cagaagcagc
     1861 aggagttcgt cgtcggcatt atcggtttgg ttgctgtcgc gatgctgact tatatgattt
     1921 tatggatgaa aaaggcggcg cgttcgatga agcagcagct tcaggattct gtacaggcgg
     1981 ctttgaaccg tggcagcggt caaggatggg ccttggtcgg tatggcgttt cttgccgtgg
     2041 cgcgtgaagg tctggagagt gtttttttcc tgcttgccgt attcaaacag agcccgactt
     2101 ggcagatgcc ggccggcgcg gtagcggggg ttttggctgc cgccgtgatt ggcgcgttga
     2161 tttatcaggg tgggatgcgc ctgaatctgg cgaagttttt ccgttggacg ggggcgtttc
     2221 tgattgtcgt tgccgccggc ctgcttgccg gttcgctgcg cgcgctgcat gaggcaggta
     2281 tttggaacgc gcttcaggac attgtgttcg actcatcaaa atatttgcac gaagacagcc
     2341 cgttgggcgt gctgctcggc ggatttttcg gctataccga ccatccgacg cagggcgaag
     2401 ccttggtttg gctgctgtac cttattcccg tcatgacttg gtttttgtgc ggcagcaggc
     2461 cgtctgaaac tttaacccgt aaagaggagc tgaaatgaga aaattcaatt tgaccgcatt
     2521 gtccgtgatg cttgccttag gtttgaccgc gtgccagccg ccggaggcgg agaaagctgc
     2581 gccggcagcg tccggtgagg cgcaaaccgc caacgagggc ggttcggtca gtatcgccgt
     2641 caacgacaat gcctgcgaac cgatggaact gaccgtgccg agcggacagg ttgtgttcaa
     2701 tattaaaaac aacagcggcc gcaagctcga atgggaaatc ctgaaaggcg tgatggtggt
     2761 ggacgagcgc gaaaacatcg cccccggact ttccgataaa atgaccgtca ccctgttgcc
     2821 gggcgaatac gaaatgactt gcggtctttt gaccaatccg cgcggcaagc tggtggtaac
     2881 cgacagcggc tttaaagaca ccgccaacga agcggatttg gaaaaactgt cccaaccgct
     2941 cgccgactat aaagcctacg ttcaaggcga ggttaaagag ctggtggcga aaaccaaaac
     3001 ctttaccgaa gccgtcaaag caggcgacat tgaaaaggcg aaatccctgt ttgccgacac
     3061 ccgcatccat tacgaacgca tcgaaccgat tgccgagctt ttcagcgaac tcgaccccgt
     3121 catcgatgcg cgtgaagacg acttcaaaga cggcgcgaaa gatgccggat ttaccggctt
     3181 ccatcgtatc gaatacgccc tttgggtgga aaaagacgtg tccggcgtga aggaaattgc
     3241 agcgaaactg atgaccgatg tcgaagccct gcaaaaagaa atcgacgcat tggcgtttcc
     3301 tccgggcaag gtggtcggcg gcgcgtccga actgattgaa gaagtggcgg gcagtaaaat
     3361 cagcggcgaa gaagaccggt acagccacac cgatttgagc gatttccaag ccaatgtgga
     3421 cggttcgaaa aaaatcgtcg atttgttccg tccgctgatc gaggccaaaa acaaagcctt
     3481 gttggaaaaa accgatacca acttcaaaca ggtcaacgaa attctggcga aataccggac
     3541 taaagacggt tttgaaacct acgacaagct gggcgaagcc gaccgcaaag cgttacaggc
     3601 ctctattaac gcgcttgccg aagaccttgc ccaacttcgc ggcatactcg gcttgaaata
     3661 agccgcaagc gttcagacgg tatttggcgg cagataccgt ctgaagtttt atagtggatt
     3721 aacaaaaacc agtacggcat tgcctcgcct tgccttgccg tactatttat actgtctgcg
     3781 gcttcgtcgc cttgtcctga tttttgttaa tccactatat ccgccatata ttgcagggcg
     3841 ggatttcaac ctgccgctat cggttaatgg aaaaacggcg tgcagggata cccatcctgc
     3901 tgcacggata ttgaaggaaa caccatgagc aaaaaccaac ccgcacaacc gaccaggcgc
     3961 actcttttta aaaccgcgat cgcagccgga gcagtcggcg caatcggagg ttatctcggc
     4021 ggcaaaaaac ggggcgaaac cgccgaacgc accgccgaaa gtcaacactc gccccaagcc
     4081 tatccctgct acggcgaaca tcaggcaggc atcgttacgc cgcagcaggc gttttcgatt
     4141 atgtgcgcct tcgacgtaac cgcgcaaagt gccaagcagc tggaaaacct gttccgcacg
     4201 ctgaccgccc gcatcgagtt tctcacccaa ggcggcgaat accaagacgg cgacgacaaa
     4261 cttccgccag ccggcagcgg cattttgggc aaagccttca accccgacgg gttgaccgtt
     4321 accgtggggg tgggcagcag cctgtttgac ggccggttcg gactcaaaga caaaaaaccg
     4381 attcatttgc aggaaatgcg cgacttctcc aacgataagc tgcaaaaaag ctggtgcgac
     4441 ggcgatttga gcctgcaaat ctgtgccttc acccccgaaa cctgccaagc cgccctgcgc
     4501 gacatcatca aacacaccgt ccaaaccgcc gttatccgct ggagtatcga cgggtggcag
     4561 cctaaatccg aacccggcgc gatggcggcg cgcaacctgt tgggcttccg cgacggcacg
     4621 ggcaacccca aagtttccga ccccaaaacc gccgacgagg ttttgtggac gggtgtggcc
     4681 gccaacagcc tcgacgaacc ggagtgggcg aaaaacggca gctatcaggc agtccgcctt
     4741 atccgccact ttgtcgagtt ttgggacagg acgccgcttc aagagcaaac cgacattttc
     4801 gggcggcgca aatacagcgg tgcgccgatg gacggcaaaa aagaagccga ccaaccggat
     4861 tttgccaaag accccgaggg gaataccacg cccaaagaca gccatatacg cctggcgaat
     4921 ccgcgcgatc ccgaattcct caaaaaacac cgcctcttcc gccgcgccta cagctattcg
     4981 cgcggactcg cctcaagcgg acagcttgat gtcgggctgg tgttcgtctg ctatcaggca
     5041 aaccttgccg acggattcat cttcgtgcaa aacctcctca acggcgaacc gctggaagaa
     5101 tacatcagcc ccttcggcgg cggctatttc ttcgtcttgc ccggcgtgga aaaaggcggc
     5161 tttttggggc aagggctgct gggcgtataa atccgccata taaaaaacgc cgtccgaacc
     5221 ttgccaaacg ggttcggacg gcgtttcttg tttttgggcg gtcaggcttt tttgacgaat
     5281 tcggatttta aattcatcgc gctgccgtcg attttgcagc cgatgttgtg atcgccttct
     5341 tgcaggcgta tgcctttgac ttttgtgcct tgtttgatca ccatcgagct gccttttacc
     5401 ttgaggtctt tgatgaggat gacggtatcg ccgttttgca gcactgcgcc gttggcatcg
     5461 agcacttgag ccgcaaggtc ggcggcggat tcggtttcat tccattcgtg ggcgcattcg
     5521 gggcagatgt attgtccgcc gtcttcataa gtgtattcgg aggcgcattg tgggcatggg
     5581 ggtaatgaca tggtttgcag tccttatctg atatcggagg agtttgatgc cgtctgaaac
     5641 ctgaaaccgg cttcagacgg catagcttta ttgcttgtct ttttcaggcc gcatccagcc
     5701 ttcgatgacg gtttggcggg cgcgggcgag ggcgagtttg ttgtcttcga tattgcgggt
     5761 aatcgtgctg cctgcgcctg tggttacttt gttgccgagg gtaacggggg cgactaggac
     5821 gcagtttgaa ccgatgcgga cttcgtcgcc gataacggtt ttgtgtttgt gcacaccgtc
     5881 gtagttggca ataatcgtac ctgcgccgaa gttggttttg ctgccgactt cggcatcacc
     5941 aatgtaggtg aggtggttgg ctttggtgcc tttgccgatg gcggcgtttt tgatttcgac
     6001 gaagttgccg acgtgtacgt cggcggctag tttggcttgc ggacgcaggc gggcataggg
     6061 gccgattcgg ttgttttcgc cgacttcgca gctttcgagg tgggagaagg gggcgatttt
     6121 gctgtttgcg ccgattttgg cgtttttgat gacgcagttt gcgccgattt cgacgttgtc
     6181 gccgagttcg acttcgcctt caaagataca gttcacatca attacgacat cctgtccgtg
     6241 tttcagacgg cctcgtaaat cgaaacgtgc cggatcgcgc agggttacgc ctgctttgag
     6301 caattcttgc gcctgttcgg tttggaagat gcgttcgagt tcggcgagct ggcgtttgtt
     6361 gttcacgccg gcggcgaggt gggaggcgcg gacttggacg ggatgaactt taataccgtc
     6421 ggcaacggct ttggcaatga ggtcggttaa ataatattcg ccttgagcat tgttgctgga
     6481 gaggctgttc agccagtttt ccagtttggc gttgggcaga accaaaatgc cggtattgat
     6541 ttctttcacg gctttttggg cggcgtcggc gtctttttct tcgacaatgg cggttacgct
     6601 gccgctgccg tcgcggatga tgcgccccaa acctgacggg tcggcgggca cgtcggtcaa
     6661 cagcccgact tcgttgcctg cggcttcgag cagggtttcg agggtttcaa cgtcaattaa
     6721 aggaacgtcg ccgtacaaca ccagcgtgcg gccttcggcg gcaaggtggg gcagggcggt
     6781 tttgacggcg tggccggtac cgagctgttc ggtttgttca acccaaacga catcgcgttt
     6841 gacagcgttt aaaacttggt ctttgccgtg cccgatgacg acgcagatgt tttgcggatt
     6901 cagcgcggcg gcggtgtcga taacgcgccc gagcatgggc ttgccgccga tgcggtgcag
     6961 cactttgggc attttggaat acatgcgcgt gcctttgccg gcggcgagga taacgatgtt
     7021 taaagtgttt tgcggcatga cggtttcctg tgcaatgccg tctgaaaggg cttcagacgg
     7081 catagggtgg gtttatcggt tttgaaattt gggcttttgc cagtgttggc gatgctcttc
     7141 gtcggcgttg ttgccggttt ggttgggtaa cacggcatgg cgttcgggac ggtattggtt
     7201 gtagttcata tttttcgagt agctgccgtc ttggtaataa atgggcgtgc cggcgggata
     7261 tttttgacgg acggcggtct tgccgttgcc gtcttgataa gtttcccacg cgcagcccga
     7321 caaaagggcg gcggcagtca tcaggataag gaaggtttta cgcataacat tctttcgtat
     7381 tttcgggggg ttgtgcgggt attgtaatga ttttggcggt gttctgacaa agtttctgca
     7441 taccgagcca gttgcgccat atcgcttacg gaagcatcga taaagggcag gtcgtgcact
     7501 tttgcaccga accggacggt tttcatgccc aatgcttttg cctgatgcag gttgtccgcg
     7561 ctgtcgtcca ccataatgca gcattcgggc ggtacgtcca acaggcggca gacattgaga
     7621 tacgcttgcg gattgggttt gtacagcagc ccgaaatcat ccgtgccgaa aagcgcgtcg
     7681 aaacggtttt ccaaaccgag tgcgccgaca acggcacgga cgtaaaacga cgggccgttg
     7741 gaaaaaaccg ccttgcgccc ttttaggcgg ctcagggtgt tttgtgtttc cggcataccg
     7801 tgcagacggg tcaaaacctc gtcaatcgga tggctttcgc gcaaaaattc ggcgatgtcg
     7861 atttcgggat ggtggatttg cagtccggcg agcgttgcgc cgtagcggtg ccaatagtct
     7921 tgacgcaggt cggacgcggc ggattcggag agtttgaggc ggcgtgtcat atagcgtgtc
     7981 atagcgcggt tgatgagtgt gaagaggccg gcatcggcat tgtgcagcgt gttgtcgagg
     8041 tcgaacagcc acacggtcgg gttttcttgc attttgaacc gtgaaaattt gttagaatgt
     8101 tattttacag cgaatagagg aggactcgga atgaaacgga aaatttggct gctgccgctg
     8161 ctggcggttt cggcatacct gcaggcgcag acggaagtca ggctggcggt gcataagtcg
     8221 ttcagcctgc ccaaagggct gattgcgcgc ttcgagcggg caaacgatgc gaaggtgtcg
     8281 attattcagg cgggcggcgc gaacgaaatg ctcaacaaac tgattttgag ccgcgccaac
     8341 ccgattgccg acgcggtgta cggtttggac aacgccaata tcggcaaggc gcgggaaatg
     8401 ggcattttgg cggcggcgca acccgaatcc gcccccgtcg cggtcgggct gccttcggct
     8461 ttggcggtcg attacggcta tgtgtccatc aattacgaca aaaaatggtt tgaaggcaaa
     8521 aagctgcccc tgccgcaaac cctgcaggat ttgacccgcc ccgaatataa aaacctattg
     8581 gtcgtgccgt cccccgccac gtcgtccccg gggctgggct tcctgatggc gaacatcagc
     8641 ggtctgggcg aagaaggcgc gttcaaatgg tgggcacaga tgcggcagaa cggcgtgaag
     8701 gtcgccaaag gctggagcga ggcgtattac accgactttt cgcacaacgg cggcgcgtat
     8761 ccgctggtgg tcggttatgc cgccagcccg gcggcggaag tgtatttttc caaaggcaaa
     8821 tacagcgagc cgccgacggg caacctgttt ttaaaaggcg gcgtattccg ccaggtcgaa
     8881 ggcgcggcgg tcttgaaggg cgcgaaacag ccggaattgg cggcaaaact ggtgcaatgg
     8941 ctgcaaagtc gggaagtgca gcaggcggtt ccgtccgaaa tgtgggttta ccccgccgtc
     9001 aaaaacacgc gcctgcccga cgtgttccgc ttcgcccaag ccccgacgca caccaccgcc
     9061 cccgcgcagc gcgatattga tgcgaaccag cgcggatggg tttcccgttg gattagaacg
     9121 gttttgaaat aaaacaaaca taccgccccg cagggcttca tacggcattt ttacacctgt
     9181 gccgattacg ccgcacgggg cggatgttcg atcaagagga aaacaatgga cttcaaacaa
     9241 tttgattttt tacacctgat cagtgtttcc ggttgggagc atctggctga aaaggcgtgg
     9301 gcgttcgggc tgaaccttgc cgccgcgctg cttatttttt tggtcggaaa atgggcggcg
     9361 aaacgcattg tcgctgtgat gagggcggcg atgacgcgcg cgcaggtcga tgccacgctg
     9421 attagttttt tgtgtaatgt tgccaatatc ggcttattga ttttggtgat tattgccgca
     9481 ttgggcagat tgggcgtttc cacaacatcc gtaaccgcct taatcggcgg cgcgggtttg
     9541 gcggtggcgt tgtccttgaa agaccagctg tccaattttg ccgccggcgc gctgattatc
     9601 ctgttccgcc cgttcaaagt cggcgatttt atccgcgtcg gcggttttga aggatatgtc
     9661 cgagagatta aaatggtgca gacttctttg cggacgaccg acaacgaaga agtcgtgctg
     9721 cccaacagcg tggtgatggg caacagcatc gtcaaccgtt ccacactgcc gctgtgccgc
     9781 gcccaagtga tagtcggcgt cgattacaac tgcgatttga aagtggcgaa agaggcggtg
     9841 ttgaaagccg ccgtcgaaca ccccttgagc gttcaaaacg aagagcggca ggccgccgcc
     9901 tacatcaccg ccttgggcga caatgccatc gaaatcacat tatgggcttg ggcaaacgaa
     9961 gcagaccgct ggacgctgca atgcgacttg aacgaacaag tggtcgaaaa cctccgcaaa
    10021 gtcaatatca acatcccgtt cccgcaacgc gacatacaca tcatcaattc ttaaacgccg
    10081 tctgaaaggg gagtgggaaa tggacgcgct gcacaccatc gcccgaaacc tgacgaaaaa
    10141 acgtcaaacc gtaagctgtg ccgaatcctg tacgggcgga atgcttgccg ccgcattcac
    10201 aagcgttgca ggcagttcgc aatggttcga tcaaagtttt gtaacataca gcaacaaagc
    10261 caaagaagac cgcttgggcg tgttgcccga aaccctgctc gaacacggcg cggtcagccg
    10321 ccaaaccgtc tatgagatgg cgcgcggcgc gaaagccgtg gcgcaggcgg attacgccgt
    10381 cggtatttcc ggcatcgccg gaccgggcgg cggcagcgaa agcaaacccg tcggcacggt
    10441 ttggttcggg tttgcctttc cgggcggaag ttgcgaagca atgcgccgtt ttgacggcaa
    10501 ccgcgaatcc gtccgcgcgc aggcggtcgc cttcgcgttg gaacggttgg cggggctgat
    10561 tgaaaacggc ggcgatgccg tctaaacaaa atctccgtct ggacaaaatc cccgccggat
    10621 aaaaaatacc gtctgaaacg ttgcaggttt cagacggtat tttgtcgggt taggcggcgg
    10681 tgcggcttat ttcactttac tcttcaacgc gccgtagcct gccgcgtcca tttgttccag
    10741 cgggatgaat ttcaagctcg cgccgttgat gcagtagcgc agtccgcctt tgtcgcgcgg
    10801 gccgtcgggg aagacgtgtc ccaaatgcga atcggcggcg tggctgcgca cttcggtgcg
    10861 gcgcatgttg tagctgaaat catcgtgttc ggtaacggat tttgcatcaa tcgggcgcgt
    10921 gaagctcggc cagccgcagc cggaatcata tttgtcggcg gagctgaaca aaggttcgcc
    10981 gctgacaacg tccacataaa tgccgggttt gaacaaatgg tcgtattcgt ggctgaaggc
    11041 gtattcggtc gcgctgtttt gggtcacttg gtattgctct tcggtcaggg tgcgtttgag
    11101 ttcggcatca ctgggttttt tatacgttgc cgcatcgaag cctttgcctt gcggggcggc
    11161 tttggttttg cccggcagtg gttcgtcggc tttgcggata tcgatgtggc agtagccgtt
    11221 ggggttttta atcaggtagt cctgatggta ttcctcggca tcgtagaagt ttttcagcgg
    11281 ctcgttttca acaacgaggg gcagttggta tttttgctgc tcgcgtttga gggcggcggc
    11341 gatgacggct ttttcggcgg ggtcggtgta gtacacgccg ctgcggtatt gcgtaccggt
    11401 gtcgttgccc tgtttgttga ggctggtcgg atcaacgacg cggaagaaat attgcaggat
    11461 gtcgtcgagg ctgagtttgt cggcatcgta ggtaactttg acggtctcgg cgtgccccgt
    11521 atggcggtag gacacgtctt cgtagctcgg atttttcgtg ttgccgttgg cgtagccgga
    11581 taccgcgtca accacgccgt cgatgcgttg gaaataggct tccaagcccc agaagcagcc
    11641 gccggcgagg taaatggtgc gcgtgttcat gatttttgaa tcctttttct gagtgtcggg
    11701 tttgtagaac gaatgtttca agctgcccaa atcggcattc gggtcgcgga ttaacgccaa
    11761 cgcctgcgct tcgttgatgc tgcctttgac gatgcgctgc acgtcgccgt ctttaccgat
    11821 taacgcccac gaggggtaaa cgctgatatt caggctttgg gcgatcgtgc cgccgttgtc
    11881 ggttacgacg ggcagcttgg gataattcaa accggcatac catttttgga agtcgccgtc
    11941 ttttttctcg tgcaaaaagc ccggagacgc gacggtaatc aggttggcgg agctgaattt
    12001 tgcatcttgc gcccattttt cggtctgtcc caattcggac agacacaaag gacaccagct
    12061 cgcccaaaat ttaatcagcg tcggtttgtc ttttttcaag taaacactgg cggggcggtt
    12121 gtccgcagtt ttcaaagtgg ataaagtgtg cggcacggtc gcggctccgg catcgacgat
    12181 tttgggcgaa caagcaccca gcgcaagcag gcagccgaac ttggcgcaaa gggaaaagaa
    12241 agtacggtgt ttcattttga gtttcctgtg tggacggttt gcatgattag acgtttgaga
    12301 tgccgaaacc ttacagctcg gattttcaga caaccttgcc gcgtaaaata cgctacaata
    12361 cgccctgttt caagtttcta aaattaaaag gaaaattcaa tgttcagctt cttccgtcgc
    12421 aagaaaaaac aggaaacgcc ggctcccgag gaggctcaag ttcaggaaac tgcagcaaaa
    12481 gcagaatccg aagttactca aatagttgaa aatattaaag aagaagtcga atctttaacg
    12541 gaaagcgtca aagggcaggt cgaatcggct gttgaaaccg tcagcggtgc ggttgaacaa
    12601 gtaaaggaag ccgttgccga gatgctgtct gaagcagagg aagcggcgga aaaagcagcg
    12661 gaacaagtcg aagcggcaaa agaagccatt gccgaaaccg tcggcgaggc tgtcgggcaa
    12721 gttcaagaag ccgttgcaac aactgaagaa cacaagctcg gttgggcggc gcgtttgaaa
    12781 caaggtttga ccaaatcgcg cgacaaaatg gcgaaatcgc tggcgggcgt gttcggcggc
    12841 ggacaaatcg acgaagattt gtacgaagag ctggaaaccg tgctgattac cagcgatatg
    12901 ggcatggaag ccaccgaata cctgatgaaa gacgtgcgcg accgcgtcag cctcaaaggg
    12961 ctgaaagacg gcaacgaatt gcgcggcgcg ctgaaagaag ccttgtacga cctgattaag
    13021 cctctagaga aaccgctggt tttgcccgaa accaaagagc cgtttgtcat catgcttgct
    13081 ggcatcaacg gcgcgggcaa aaccacatcc atcggcaaac tcgccaaata tttccaagcg
    13141 cagggcaaat ctgtgctgct tgccgccggc gatactttcc gcgccgccgc gcgtgagcag
    13201 cttcaagctt ggggcgaacg caacaacgta accgtgattt cgcaaaccac gggcgattcc
    13261 gccgccgtgt gcttcgatgc cgtccaagcc gccaaagcgc gcggcatcga cattgtgctg
    13321 gccgacaccg ccggccgcct gcccacgcag cttcacttga tggaagaaat caaaaaagtg
    13381 aaacgcgtgc tgcaaaaagc catgcccgac gcgccgcacg aaatcatcgt cgtgcttgat
    13441 gccaacatcg ggcaaaacgc cgtcaaccaa gtcaaagcct ttgacgacgc attagggctg
    13501 accggtttaa tcgtgaccaa actcgacggc acggcaaaag gcggcatcct cgccgcgctt
    13561 gcctccgacc gccccgtccc cgtccgctac atcggcgtgg gcgaaggcat agacgatttg
    13621 cgcccgtttg acgcgcgcgc gtttgtggac gcactgctgg attgagccga aatgccgtcc
    13681 gaaaacagca gaccgatgcc gtcattcccg cgcaggcggg aatccagacc ttgggataac
    13741 ggcaatattc aaagtttata aaagacccgt cattcccgct caggcgggaa tctagacctt
    13801 agaacaacag taatattcaa aggttagctg aagctttaga gattctggat tcccactttc
    13861 gtgggaatga cgggatgtag gttcgtggga atgacgcggt gcaggtttct gt
//
LOCUS       DAWKOX010000036        13878 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.036, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000036 DAWKOX010000000
VERSION     DAWKOX010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13878
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.036"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..180
                     /locus_tag="WJK78_000768"
     CDS             <1..180
                     /locus_tag="WJK78_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597718.1"
                     /translation="FLEKNKFKSAKGASEGSRYIDLSMKLRALLAMQSEIKNLAELDV
                     LVQAEYRDSTDIDWE"
     gene            290..1786
                     /locus_tag="WJK78_000769"
     CDS             290..1786
                     /locus_tag="WJK78_000769"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ7597719.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AVIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGEIRNPHVADM
                     KDINCREFAVLAVLAAAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            1796..3241
                     /gene="nuoN"
                     /locus_tag="WJK78_000770"
     CDS             1796..3241
                     /gene="nuoN"
                     /locus_tag="WJK78_000770"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ7597720.1"
                     /translation="MNWSDLNLMPAMPEIVLLSLLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFALFVYARPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVG
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKVAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARLAAGGNNAAKF
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            3353..3652
                     /locus_tag="WJK78_000771"
     CDS             3353..3652
                     /locus_tag="WJK78_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ7597721.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHLIELA
                     AGFALTAVLAYILESRAGAVHNQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(3761..4657)
                     /locus_tag="WJK78_000772"
     CDS             complement(3761..4657)
                     /locus_tag="WJK78_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ7597722.1"
                     /translation="MNPTNDLKAWQLRAQAQTELLLERFLPSEGEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIQYDEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(4641..4865)
                     /locus_tag="WJK78_000773"
     CDS             complement(4641..4865)
                     /locus_tag="WJK78_000773"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ7597723.1"
                     /translation="MKKNAPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGLKELNLESDE"
     gene            complement(5112..6035)
                     /gene="rsgA"
                     /locus_tag="WJK78_000774"
     CDS             complement(5112..6035)
                     /gene="rsgA"
                     /locus_tag="WJK78_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ7597724.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIEAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            complement(6040..7896)
                     /locus_tag="WJK78_000775"
     CDS             complement(6040..7896)
                     /locus_tag="WJK78_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7597725.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAY
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPNALPLKVSQGEIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPELSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(7922..8059)
                     /locus_tag="WJK78_000776"
     CDS             complement(7922..8059)
                     /locus_tag="WJK78_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597726.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(8059..8643)
                     /gene="ruvA"
                     /locus_tag="WJK78_000777"
     CDS             complement(8059..8643)
                     /gene="ruvA"
                     /locus_tag="WJK78_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ7597727.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(8725..9051)
                     /locus_tag="WJK78_000778"
     CDS             complement(8725..9051)
                     /locus_tag="WJK78_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ7597728.1"
                     /translation="MNIKHLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(9113..9832)
                     /locus_tag="WJK78_000779"
     CDS             complement(9113..9832)
                     /locus_tag="WJK78_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ7597729.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSALV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNLASSASNPNLSVEKRHYEYVVKMGPFSSQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            complement(9829..9951)
                     /locus_tag="WJK78_000780"
     CDS             complement(9829..9951)
                     /locus_tag="WJK78_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ7597730.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(9962..10426)
                     /gene="trmL"
                     /locus_tag="WJK78_000781"
     CDS             complement(9962..10426)
                     /gene="trmL"
                     /locus_tag="WJK78_000781"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ7597731.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(10491..10988)
                     /locus_tag="WJK78_000782"
     CDS             complement(10491..10988)
                     /locus_tag="WJK78_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ7597732.1"
                     /translation="MWASLHYEPPVSNMIHALKHLADLSMVQPLADLMMQNPPDRLAD
                     ECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKG
                     GERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELAKTLKKSGANRICCWTLAR
                     TPMKK"
     gene            11044..11958
                     /gene="bioH"
                     /locus_tag="WJK78_000783"
     CDS             11044..11958
                     /gene="bioH"
                     /locus_tag="WJK78_000783"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ7597733.1"
                     /translation="MCLKHRGQLFAASVRYAAKSAAQPAQMPSETPDEPWHNTQRLIV
                     GASAMRRQQERKSMPDAVKKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGDA
                     PFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARL
                     TAAEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTHDADRIIGRILPDLARC
                     GTPSALQEALDAAERADARHLLDKIDVPVLLVFGSKDAITPPRMGEYLHRRLKGSRLV
                     VMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            11960..12748
                     /locus_tag="WJK78_000784"
     CDS             11960..12748
                     /locus_tag="WJK78_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ7597734.1"
                     /translation="MNPQDKCWQVHRHLAEYADQRLTLVRNAPKYILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAARKGGFWQRFTGKGVVQHCQSPIAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMAWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
     gene            complement(12829..12930)
                     /locus_tag="WJK78_000785"
                     /pseudo
     CDS             complement(12829..12930)
                     /locus_tag="WJK78_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            12919..13155
                     /locus_tag="WJK78_000786"
     CDS             12919..13155
                     /locus_tag="WJK78_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597735.1"
                     /translation="MFVNPLYADAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTHATL
                     LALDWQGNKPLGAEELADLKPLYKDLKNNIGNIV"
     gene            13486..>13878
                     /locus_tag="WJK78_000787"
     CDS             13486..>13878
                     /locus_tag="WJK78_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HEZ7597736.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLYDSGLTKTSTAL"
BASE COUNT         2756 a         3514 c         4125 g         3483 t
ORIGIN      
        1 tttttagaaa aaaataaatt taagtctgca aaaggagcaa gtgaaggctc tagatatatt
       61 gatttaagta tgaagttaag agctttacta gcaatgcagt cagaaataaa aaatttggct
      121 gaattagatg ttttagtgca ggcagaatat cgcgatagta cagatattga ttgggagtga
      181 gtaaagaggg gagagagtat tcatcccttt ttcagacgac ctcctgaaac gtcgtctgac
      241 aaactaaccc gcactacgat atttttattt taaccacagg ttaaccacta tgttttccaa
      301 ctacctactc agcttggcaa tatggatacc catcgccgca ggtgtgctgg ttttgtcgac
      361 cggtaaggac agccgtgcgc cgctggcgcg tgtgcttgcc tttatgggtg cgcttgccgg
      421 tttcttggta acgctgcccc tgtttaccgg tttcgaccgt ttgagcggcg gctatcaatt
      481 taccgagttc cacgagtgga ttccgctgct gaaaatcaac tatgcattgg gcgtggacgg
      541 tatttcagtg ctctttatca tcttgaatgc gtttattacg ctgctggtgg tattggccgg
      601 ttgggaagtc attcagaaac gtccggcgca gtatatggcc gctttcctga tgatgtcggg
      661 tttgattaac ggcgcgtttg ccgctcagga tgcgattctg ttttatgtgt tctttgaggg
      721 tatgctgatt ccgctgtacc tgattatcgg tgtatggggc ggcccgcgcc gcgtctatgc
      781 gtcggtcaag ctgttcctct atacgctgat gggttcactc ttgatgctgg ttgccatggt
      841 ttacctgtac tatcaaacag gcagcttctc tattgtcgat ttccaaaaca tcaaacagat
      901 tccgttgggc gtacagcagc ttttgtttgt ggcattcttc ctgtcatttg ccgtaaaagt
      961 gccgatgttc cccgtacaca cttggctgcc ggatgcccac gttgaagcac cgaccggcgg
     1021 ttcgatggtg ttggctgcga ttacgctgaa actgggtgcg tatggtttct tgcgctttat
     1081 cctgccgatt atgccggatg cggcacgcta ttttgccccc gtgatcatcg tattgagtct
     1141 gattgccgtg atttatatcg gtatggtggc tttggtgcaa accgatatga aaaaactggt
     1201 ggcgtattcg tccatcagcc atatgggttt tgtaacgctt gggatgtttt tgtttgttga
     1261 cgggcagttg gacgactggg cattgaaagg cgcggtcatt cagatgattt cgcacggttt
     1321 cgtgtcggcg gcgatgttta tgtgcatcgg tgtgatgtac gaccgcctgc acacgcgcaa
     1381 tatcgccgat tacggcggcg tggtcaacgt gatgcccaag tttgcggcgt ttatgatgtt
     1441 gttcggtatg gcgaacgccg gtttgccggc gacttccggc ttcgtgggcg agtttatggt
     1501 gattatgggc gcggttaaag tgaatttctg ggtgggcgcg ttggcggcta tgacgctgat
     1561 ttacggcgcg tcttataccc tgtggatgta caaacgcgtg attttcggcg agattcgcaa
     1621 tccgcacgtt gccgatatga aagacatcaa ttgccgcgaa tttgcggttt tggcggtttt
     1681 ggcggcggct gttttgggta tgggcctgta tccgaacgcg tttatcgaag tggtacatca
     1741 ggcggcaaac gatttgattg cccatgtggc acaaagcaag atttgaggtg tgtaaatgaa
     1801 ctggtctgat ttgaatttaa tgcccgccat gcccgaaatc gtgctgctgt cgctgctggt
     1861 gttattgttg ctggcagact tgtgggtcag tgatgacaaa cgccgttgga cgcattacgg
     1921 cgcgttggca acggtggcgg ttacggctgt ggtgcagctt gccgtttggg aacagggcag
     1981 cacgtcttcg ttcaacggca tgtatattgc agacggtatg tcgcgtttgg caaaaatggt
     2041 tttatatgcc ttgacctttg ccctgtttgt ctatgccagg ccctacaacc aagtgcgcgg
     2101 tattttcaaa ggcgagtttt acaccctgtc gctgtttgcc ctcttgggta tgggcgtgat
     2161 ggtgagcgcg gggcattttt taactgccta tatcggtttg gaactcttgt cgcttgccct
     2221 ttacgccctg attgccctgc gccgcgattc cggctttgcc gccgaagccg ccttgaaata
     2281 ttttgttcta ggcgcgctgg catccggcct gctgctctac ggtatttcta tggtttacgg
     2341 cgcaaccggt tcgctggaat ttgccggcgt gcttgcctct tccttcaatg aagaagccaa
     2401 cgaatggctg ttgaaactgg gtctggtgtt tatcgtcgtc gccgttgggt tcaaactcgg
     2461 cgcggtaccg ttccatatgt gggtgcccga cgtgtatcac ggcgcgccca cttctgttac
     2521 cgccctagtc ggcactgccc cgaaagtcgc cgccgtcgtt ttcgctttcc gcatcctcgt
     2581 taccgggctg ggaaccgtgc atcatgactg gtctctgatg tttgccctgc ttgccgccgc
     2641 ctcgctgctg gtcggcaacc ttgccgccat catgcagacc aatatcaaac gtatgctcgc
     2701 ctattccacc gtatcgcata tgggtttcat cctgttggcg tttatggcgg gcgcggtcgg
     2761 ctttgcggcg ggtctctatt acgccattac ctacgcgctg atggcggcgg cagggttcgg
     2821 cgtgttgatg gtgttgtcgg atggggacaa cgagtgcgaa aacatcagcg atttggcagg
     2881 gctgaaccaa caccgcgtat ggcttgcctt tttgatgtta ctggttatgt tctctatggc
     2941 gggcattccg ccgctgatgg gtttttacgc caaatttggc gtgattatgg cactcttaaa
     3001 acaaggctat gtttggttgt cggtgtttgc cgtcgtgatg tcgctgattg gcgcgttcta
     3061 ctacctgcgc gtggtcaaag tcatgtattt tgacgaatcc ggccgcgccc gtctcgccgc
     3121 cggcggcaac aatgccgcaa aattcctctt gagcgtcaac gcgctgctgt tggtgctgtg
     3181 gggcattatg ccgcaaaccg ttatcgactg gtgcgccaag gcgttggaaa acacgctgta
     3241 agccgccgca acggcagccg tgtcagaggc tgccgttttt gttaagatat gccgttccgc
     3301 aatgcagttc agacggcatc gccgccgaca acgcccaaac agaaagccca ccatgaccgc
     3361 atccatgtac atccttttgg tcttggcact catctttgcc aacgccccct tcctcacgac
     3421 cagactgttc ggcgtggccg cgctcaagcg caaacatttc ggacaccact tgatcgagct
     3481 ggcggcaggt ttcgcgctga ccgccgttct tgcctacatc ctcgaatccc gtgcgggagc
     3541 ggtacacaat cagggttggg agttctacgc caccgtcgtc tgcctgtacc tgatttttgc
     3601 gtttccctgt ttcgtgtggc ggtatttttg gcacacgcgc aacagggaat aggcaggcat
     3661 aggaatgccg tctgaaaccc tttcagacgg catttgtttc attcaagtgc aggccggcat
     3721 cgctgtgccg gcacgtttca gccggcgata tacgccggtt ttaatatttg cgggcgactg
     3781 caaattctgc caactgccgc aggcgcaggg ctttgtcgcc gaagggttcg agcagcgcga
     3841 ccgcttcggc aaccagtttg tgtgcgtatg agcgcgccgc ttccaagccc atcagtttca
     3901 cataagtcgg cttgtcgttg tctgcgtctt tgcccgccgt tttgcccaaa gtcgccgtgt
     3961 ccgcttcaca atccaacaca tcgtcaatga cttggaacgc cagccccagt tttgccgcat
     4021 aatcgtccaa taccgccaga ctgtcttcag acagattcgg gcaggacatc gcccccaata
     4081 aaaccgccgc acggattagc gcacccgttt tcaggctgtg catctgttcc aaatcggctt
     4141 gaaccatttg tttgccgaca ttcgccaaat cgattgcctg accgcccgcc atgcccgcgc
     4201 tgccgcccgc tttcgccaac accgacaaca ttgccaactg gcgtgctgcg ggcagttctg
     4261 tcggacggct taacacgtcg aaggcttggg tttgcaaagc gtcgccgacc agtagcgcgg
     4321 tggcttcgtc gtattgtata tggcaagtcg gtttgccgcg ccgcaggctg tcgttgtcca
     4381 tcgccggcat atcgtcgtga accaaagaat agacgtggat catttcgatt gccgccattg
     4441 cctgtccgac cgcatccgcc acggctccgc ccaattccga agccgccagc accagcatcg
     4501 gacgcagacg tttgcccccg tccaaagccg cataacgcat ggcttcgtgc agtgtgtgcg
     4561 gtatttcccc ctcagacggt aaaaaccgtt caagcagcag ctctgtttgc gcctgcgccc
     4621 taagctgcca tgctttcaaa tcattcgtcg gattcaaggt tcaactcctt cagcccgtcc
     4681 gcatccaaaa cctgtaattt ctgttcgact tgtgccagtt tggtttggca gtacctgacc
     4741 agctcgttgc cttcctgata ggcggcaagc gcgtcttcca agggcatttc gccctgcata
     4801 gactgcgtca gcgattcgag gcgcgacaag gcttcttcaa acgatttcgg ggcgtttttc
     4861 ttcatcgtat ttccttttcg gttgaaaccc cgccctttag ggcggcagga tcagacttta
     4921 tttgggaggg gtgtaaccct ttccaaatca gggcaataca tagggcggtg ctttatgtgc
     4981 cgtcctgtgt gttggaacat agtttcggat gttccggtaa aaagcggatt gtagcatttt
     5041 tgaaaaacgg atgccgtctg aaacccgaat ccggcttcag acggcatttt ttccgcccag
     5101 gcggcaaggc gttacccggg cagttcgtcg gtgatgccct gcaaaaaggc gaggcgttcg
     5161 gggcttgccg ccccggtttg cgcggcggct ttgaaggcgc agccgggttc ggcgcggtgg
     5221 gtgcagttgt ggaagcggca ttgcccgaca aggtggcgga aatcggggaa atagcgcggc
     5281 aaatcggcgg cttggaggtg gtgtaaacca aattcttgca aacccgggga gtcgatgagt
     5341 tgggtttcgc cgttcaaatc ataaagccgg gcgtgggtgg tggtgtgttt tcccgagtcg
     5401 agtgcggcgg aaatgtcgcc ggtgcgggcg gtttggctgc ccaaaagggc gttggtcagg
     5461 gtggatttgc ccataccgct ctgcccgagc aggatgttgc tgtgcccttg cagggcgggg
     5521 cgcaggctgc cggcgttttc cagtgcgcgg gtttcgatga cgggataacc cagcgtttcg
     5581 tagaatttga gtttttcgcg ccaaagggcg gtttcgggca ggtcggcttt gttcaggacg
     5641 atgacggctt caataccggc ggcttcggcg gcaagcaggg cgcgttgcag cagccgcacg
     5701 ctcggactcg ggacggcggc ggttacgatg aggagttggg taacgttggc ggcgatgagt
     5761 ttggttttcc acgcgtcttg gcggtagagc aggctttggc gcggtaaaaa atcttcaatc
     5821 acaacttgtt cggcgttgac ggggctgatg cggacacggt cgccgcaggc gaaatcgacg
     5881 cgttttttgc gggtgctggc ttcgtaggtt gtgccgtcgg gcgtgcgcac gatgtagcgg
     5941 cggccgtagc tggcggtaat ttgggcggtg tcgttcatgg tttctttggg gttgggtgtg
     6001 gaaatgccgt ctgaaaacgg gtgttcggac ggcatcggtt cagtcgtgct gccactcgac
     6061 gtgttcgttg aggaagccgc cgctctggtg cgcccagagt ttggcgtaaa gcccgcgttt
     6121 ttcgaggagt tcggcgtgtg tgccttcttc gatgatgcgg cctttgtcga ggacgacgag
     6181 cctgtccatt gcggcgatgg tggagaggcg gtgggcgatg gcgatgacgg ttttgccgtc
     6241 catcattttg tcgaggcttt cctggatggc ggcttcgact tcggaatcga gcgcgctggt
     6301 ggcttcgtcg agcagcagga tgggcgcgtc tttgagcatc acgcgggcaa tggcgatgcg
     6361 ctggcgttgc ccgccggaga gtttcacgcc gcgttcgccg acgtgcgcgt catagccgcg
     6421 ccgccctttg gcatcggaaa gttcggggat gaagccggcg gcttcggcgc gttcggcggc
     6481 ggaaaccatt tcggcatcgg tcgcgtcggg gcggccgtaa ataatgttgt cgcgcacgga
     6541 acggtgcagc agcgaggtat cttgcgtgac caaaccgatt tgggcgcgta aagattcttg
     6601 ggtaacgccg cttatgtcct gcccgtcgat cgaaaccgtg ccgctttgcg gttcgtagaa
     6661 gcgcaaaagc aggttgacga tggtggattt gcccgcgccg ctgcgtccga tcaagccgac
     6721 tttttcgccc gggcggatgg tgaggttgaa gccgttgagc agcggtttgc cggcttcgta
     6781 gcagaaatcg atgtgttcaa atttgatttc gccttgcgac actttcagcg gcagggcgtt
     6841 cggcttgtcg aggatggtgt gcggtttgga cagggttgcc atgccgtcgc cgacggtgcc
     6901 gatgttttca aacagccgcg cggattccca cataatgtat tgcgacagcc cgttgacgcg
     6961 caacgccatc gcggtggcgg tggcgaccgc gcccacgccg acctgcccgt tgtgccagag
     7021 ccagatgccc agtgcggcgg tggagagggt cagggaggtg ttgacgatga agctgcacga
     7081 atgcagcagc gtcgccagcc gcatttgggc gcgcaccgta accataaatt cttccatcga
     7141 ctgcttggca taggcggctt cgcgcgcgcc gtgggagaag agtttgacgg tggcgatatt
     7201 ggaataggca tcggtaatgc ggccggtcat cagcgagcgg gcatccgcct gccatgcggc
     7261 ggtttgcccc aatttgggaa tcagcaggcg catcaccgaa gcgaaaccga caatccagcc
     7321 gataaagggc agcagcagcc atgagtcgag cgaggcgaga atcacgccgg aggtaatgaa
     7381 atacaccgac acataaacga ccatatcggc aaccgtcatc accgcgtcgc gcaacgccag
     7441 cgcggtctgc atgactttgg cggacacgcg tccggcaaat tcgtcctgat aaaaaccgag
     7501 gctttggttc agcatcaggc ggtggaagtt ccagcgcagg cgcataggga acacgccctg
     7561 aagggtttgc aggcgcacgt tggacgcggc atacgcccac acgaccgaaa acaccatcat
     7621 cgccgccatt gccgccagtt cccaaccttt ttcggcaaac agttcggcgg gcgcgtattt
     7681 gccgagccac tccacgattt tgcccataaa ttgaaaaacc agggcttcca taatgccgat
     7741 gccggcggtc agcgcagcca gggcggctat ccatttccgc acgccggcca tgctgctcca
     7801 gacaaaccgc cacaagcctt tttctggcgt tttcggggcg gcttcgggat aagggtcgat
     7861 tcgggactcg aaccaggaaa atattttgtt caacattgtt ttcgatttcg gtaaaacagt
     7921 ttcagacggc atcaaacaca atgccgtctg aaaggaagga caataacgcc attttacggg
     7981 aaaagccgtc gggaagacag cgcgaggcgg aaacgcaggg tttcgtcagg gcaaacgccg
     8041 cgccgccttc agacggcatt atttcagcag gtttttcaaa gcaaggcgca cgccttcgcc
     8101 cacgtccgtc cctttcggaa cgcctttgac cgccgctttt gcttcgcgtt cgctgtaacc
     8161 cagtgcaagc agtgtgctga cgatgtcttc cgtttcgtcg gcggcgggtg cggcggcaaa
     8221 cagcccgtcc gttaccgtat gcgcgaccag cttgccgcgc agttccaaga ccatacgttc
     8281 ggcggttttt ttgccgattc ccggcgcgga agacaggcgt ttgacatctt cttctgcaac
     8341 cgcccgcgcc agctcgtctg ccgtcatcgc tgacaaaatg cccaaagccg ttttcgcgcc
     8401 gatgccgccg accttaatca gttggcggaa ggtcttgcgt tcttccgcag tggcaaaacc
     8461 aaataaaaga tgtgcgtctt cccgaatgat aagctgggta aacagttgta cgctttcacc
     8521 cacgggcggc aggttgtaga aggtctgcat cgatacgtcg gcctcatagc cgacaccgtt
     8581 gacatcgatg acgatttgcg gagggttttt ttcaaccagt ttgccggtca gtctgctgat
     8641 catgtatgaa ggatcctgaa gtgtcgggtg caaaatgccg tctgaaaccg gttcgggctt
     8701 cagacggcac ggattgtatc aaattcagtc gtcgcggcgg gaggaaatca cgcggccggt
     8761 acgggcatcg acaacgactt tgtattcctg tccgtttttg acgatttcga catcatagtg
     8821 cggacggccg ttgtcgtgtt cgagatcgat gtcggtgatt ttgccgccga cacgcgccaa
     8881 cgctgctttt tcggcttggg cgcggctgat gattttgtct tgtttgctgt gttggtgtgc
     8941 ggcgtgtccg tggtcgtcat cgccgtgtcc gtcgtggtgg gcgagtgcgg gggcggaaat
     9001 gcccatcagt gcggttgcgg cggcggtcaa gagaaggtgt ttgatgttca tattttgcct
     9061 ttgtaaatcg tgggttggaa aatgtggata ttaataaggt atcaaataac cgtcagccgg
     9121 cagtcaatac cgcccgaacc ataccgcgcg cctgagcttc ggcttcggcg gcgcgttcct
     9181 gcgaggaaaa cggccccatt ttgacgacat attcgtaatg gcgtttttca accgataggt
     9241 tcgggtttga tgccgatgaa gccaggtttt gggcggcttg gttcagatag gcttgtgctt
     9301 cgtgttccgt accgaaagat ttcaagtcga tgaagatgtc tttgttttcg gcaaccagtg
     9361 cggattggcc cgggacgatt tgttcgattt tgacgtgcgc cgtcccttgg ctgacaaagc
     9421 ccaatttttg cgcggcggct ttggatacgt cgatgatgcg gttgccgtgg aagggaccgc
     9481 ggtcgttgac gcggacgatg acgcttttgc cgtttttggt attggttacg cgcacatagc
     9541 tggggatggg cagggttttg tgggcggcgg taaaggcgtt catatcgtat cgttctccgc
     9601 cggaagtttt gcgcccgtga aacctgccgc cgtaccacga ggcgttgccg gtttgcgtga
     9661 attcggcgac ttggtttttc ggcgtgtagc gttttccggc gactttgtag ctgcggttgg
     9721 cggaggcgtg cagtttttct gccttgacca ctgcgtcggc ggatgccgtc tgaagggagt
     9781 gtgtgccgaa tgcggcggtg agaaggaaaa gggtttttcg ggttaaagtc aaaacgtgtt
     9841 ccgttcttga gttgaagacg aatgggcatc atgcccgccg gatacgttcc gaaccgccgt
     9901 acagtgcgga cggcggttcg gaatgtgtcc ggataggttt tcagacggca tgaacttgcg
     9961 ttcaaacgcc gcctgcgtaa ccgtgttgcc gccacgcttc aaagagaatc acggcaacgg
    10021 tattggaaag gttcatactc cggctgccgg gctgcatcgg caggcggatt ttttgcgcgg
    10081 cgggcaggct gtcgaggatg tcggcaggca gtccgcgcgt ttccggcccg aacagtaaaa
    10141 catcgccttt ctgaaacgcg gtttcatcgg ggcgcgccgt gcctttggtg gtcagggcga
    10201 aaatgcgcct gcctgcgagt gccttgaggc agtcgtcgaa gttttcgtgc accgtcaggc
    10261 tggcgaattc gtggtagtcg agcccggcgc gtttcatttt ggcggaatcc aatgggaagc
    10321 cgagcggttt gacaaggtgc aaatccgcgc cggtattggc gcacaggcgg atgatattgc
    10381 ccgtgttcgg cgggatttcc ggttggtata aaacgatggt aaacataaat atcaatcact
    10441 tataggcgcg taaccttgcc acaaggcgga tggggtgtca aaaaatttag ttattttttc
    10501 attggcgtgc gtgccagcgt ccagcagcag attcggtttg cgcccgattt tttcagcgtc
    10561 tttgccagtt cgtccagcgt cgcgccggtg gtaaagacat cgtcgattaa caaaatatta
    10621 cagttttccg gtatcggtgt gcggatttca aaggcgtttt tgatgtttcg ccgccgttcg
    10681 ccgcctttga gcgtgctttg cggcgggcgg tggtgtcgga aaacggtgtg tcggggcagt
    10741 atctgccagc cgtagcgttg tgccagcagc ccgacgatgc tttcactttg gttgaacccg
    10801 cgttgcagca gccgctccct gcttagcggt acgggcagga cgaaatcgaa acattcgtct
    10861 gcaagccggt cgggcggatt ctgcatcatc aggtctgcca gcggctgcac catgctcaaa
    10921 tcagccaagt gcttcagcgc gtgtatcata ttgctgacgg gcggttcgta atgcagcgaa
    10981 gcccacatcc ggtcgaatgc gggcggtttt ttctgacagc cgccgcacac cgcgccgcct
    11041 tggatgtgtc tgaaacacag ggggcagctg tttgccgcgt cggtgcggta tgccgccaaa
    11101 tccgccgcgc agccggcgca gatgccgtct gaaacgccgg acgaaccgtg gcataatacg
    11161 caacgcctga tagtgggcgc gtctgcgatg cgccgccaac aagagagaaa atccatgcct
    11221 gatgccgtca aaaaagttta cctgatacac ggttgggggg cgaaccgcca cgtgttcgac
    11281 gatttgatgc cgcgcctgcc tgcaacgtgg ccggtgtccg ccgtcgattt gcccggacac
    11341 ggcgacgcgc ccttcgcgca acccttcgat attgaggcag ccgccgacgc tgttgccgca
    11401 caaatcgata cgcccgccga cattctcggc tggtcgctcg gcggattggt cgcgctgtat
    11461 ctggcggcgc gccatcccga caaagtccgt tcgctctgcc tgacggcgag tttcgcacgg
    11521 ctgacggctg ccgaagatta tcccgaaggg cttgccgcgc ctgcattggg caaaatggtc
    11581 ggcgcgttcc gaacggatta tgccaaacat atcaaacagt ttctacaact ccagcttttg
    11641 cacacgcatg atgcggacag aatcataggc agaatcctgc ccgatttggc gcgctgcggc
    11701 acgccctccg ccttacagga agctttggac gcggcggaaa gggcggatgc gcggcatttg
    11761 ttggacaaga tagatgttcc ggtactgctg gtgttcggta gcaaagacgc gattacgccg
    11821 ccgcgcatgg gcgagtatct gcaccgccgt ttgaaaggca gcaggctggt tgtgatggaa
    11881 aaggcggcgc atgcgccgtt tttgagccat gcggaagcgt ttgccgcgct gtaccgcgac
    11941 tttgtcgaag gggtttgaca tgaatccgca ggacaaatgc tggcaggttc accgccatct
    12001 cgccgaatat gccgaccaac gcctgacact cgtccgcaac gcgcccaagt atatcctgct
    12061 tgcaggtgcg gatgcggaca tcagccgcag cctgctggcg aaacgctatc cgcaggcggt
    12121 atttgaagaa tacgattccc gtgcggattt tttggcggct gccgctgccg cccgcaaagg
    12181 cggtttttgg caaaggttta cgggtaaggg cgtggtgcaa cactgccaat ccccgatcgc
    12241 gccgctgccc gaagcgtgtg ccgatatgtt gtggtcgaat ctcggactgt tggcggcgga
    12301 acaaatcctt cctgtgctgc acaactgggc gcgcgccttg aagacggacg ggctgctgtt
    12361 ttttacctgc ttcgggcgcg acacttttac cgaactgaaa tgccgtctga aagaaaacgg
    12421 cattgaaagc cgcagcgtga tgtttcccga tatgcacgac ttgggcgata tgcttgctga
    12481 aaacggcttt tacgaccccg ttaccgatac ggcgaagctg gtgttggatt acaaaaaggc
    12541 ggaaacgttt tgggcggata tggacacgct gggcgtttgg cgggcgatgg cgtggaacga
    12601 tgaaaacgcc gcgcgttcgt gtgtcgggac aatatttgaa cgggaaggcg gtttgagtat
    12661 tacgctggaa acagtgtacg gacacgccgt taaaaaactg atgctgccgc aaggggagaa
    12721 cgtggtgcag ttttttccga agagatgatg tgcagatgcc gtctgaagcc gtttccaagt
    12781 ttcagacggc atttgtttgt gaaaaccgac agaactaaag gaaatgccga tgtatagtga
    12841 attaaattta aaccagtaca gcgttgcctc gccttgccgt actatttgta ctgtctgcgg
    12901 cttcgccgcc ttgtcctgat ttttgttaat ccactatatg ctgatgccgg agacgtatat
    12961 tgcgtctata acatcagact gaagcagtac actgcctgcc aggttacccg agttgaagaa
    13021 cacggtggca aaaaaacaca tgcgaccctg ctggctttgg actggcaggg caacaaaccg
    13081 cttggggcgg aggagctggc ggatttgaaa ccactttaca aagacttaaa gaataatatt
    13141 ggaaatattg tatgaacaaa aaattaaact atatttttat gttggactgt ttagggttgg
    13201 tgatattgtt tacttgtata atagctactt ttgaaagaga ttatggattt aaaattttta
    13261 ctaattctaa gaggcctgaa ttttattatt ggattggaat gttttattat ggaattattt
    13321 cttgctggtt tgattatcaa ttaatttcaa caaaggcgaa ttcgtataaa agaaaagtta
    13381 aacaatataa aattttttca gtaatatttt cagttttgat atttatttct actatagtaa
    13441 aactttaaat tttggagcaa aaatttatga gcgattcaat tgaatatgta ttgggaacgc
    13501 ggtctgcaca tgtataaggc aagtgctgtc gtgccaacgg gatatgtacg ggttgggaat
    13561 accgcgccgc tggtcggcga agacacgcaa cggtatgcct ctttttgggg cgacggctac
    13621 gacgtgtacc gtcagttgag atggcagcag atacccgaaa aacagagaaa ggcattcaaa
    13681 aaagccgcca aaagcaaaaa gaccgtgatg tttgccggac gggaatacgg catatccaaa
    13741 cagaatttga gcgatgtttg ggatgatttt gaagacgcga tggaactgaa ggcgtttccc
    13801 tgcctgtctt cgctgtttct gaccaaatgg cataaaaatc tatatgatag tggattaaca
    13861 aaaaccagta cagcgttg
//
LOCUS       DAWKOX010000037        13720 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.037, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000037 DAWKOX010000000
VERSION     DAWKOX010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13720
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.037"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(409..744)
                     /locus_tag="WJK78_000788"
     CDS             complement(409..744)
                     /locus_tag="WJK78_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ7597737.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(824..2953)
                     /gene="dnaX"
                     /locus_tag="WJK78_000789"
     CDS             complement(824..2953)
                     /gene="dnaX"
                     /locus_tag="WJK78_000789"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ7597738.1"
                     /translation="MAYQVLARKWRPKTFADLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGID
                     NIREILENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYEPAALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIINQDGAALTAKAREMAACAV
                     GFDNALGELAILLQQLALIQAVPNALAHDDPDSDILHRLAQTIGGEQIQLYYQIAVHG
                     KRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSVQTAEKEAAAK
                     KPQPRPEAETAQTSVQTASAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNETNAPLSETPSENPIQATPNNEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDNAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNN
                     TPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARAT
                     ADKKRLDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEA
                     DPAAQKILQAFGAQWQPESLELAANRP"
     misc_feature    complement(1725..1764)
                     /gene="dnaX"
                     /locus_tag="WJK78_000789"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            complement(3048..5024)
                     /gene="mutL"
                     /locus_tag="WJK78_000790"
     CDS             complement(3048..5024)
                     /gene="mutL"
                     /locus_tag="WJK78_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ7597739.1"
                     /translation="MSRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGSGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPTQSLHERIAAIVGDDFQT
                     ASLEIDSDNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSQQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENNSENLFDRASNYPTGNKSDTHNAFGSSGKTAPMP
                     YQSAYAPQQHSLSLRESRAAMNTYAELYKKTDDIDLELSRLEQARFGNMPSETPIPQT
                     DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGRLQSQRLLIPATFAASHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPAML
                     GKADVVSLAKDVLNELVQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            5168..5353
                     /locus_tag="WJK78_000791"
     CDS             5168..5353
                     /locus_tag="WJK78_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ7597740.1"
                     /translation="MYHYQSDATQFLNRLIEEKPELEQQRLENRGLLWDVELSPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            5364..6032
                     /locus_tag="WJK78_000792"
     CDS             5364..6032
                     /locus_tag="WJK78_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ7597741.1"
                     /translation="MTTNLSNVAPDLQNYLNAIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPRYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            6032..6748
                     /locus_tag="WJK78_000793"
     CDS             6032..6748
                     /locus_tag="WJK78_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ7597742.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRPEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            6796..7281
                     /gene="purE"
                     /locus_tag="WJK78_000794"
     CDS             6796..7281
                     /gene="purE"
                     /locus_tag="WJK78_000794"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ7597743.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLNMELEQ
                     I"
     gene            complement(7464..8918)
                     /locus_tag="WJK78_000795"
     CDS             complement(7464..8918)
                     /locus_tag="WJK78_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ7597744.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACEII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8915..9616)
                     /locus_tag="WJK78_000796"
     CDS             complement(8915..9616)
                     /locus_tag="WJK78_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ7597745.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREMGVSWGSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALADSNIE
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPTDLEENA"
     gene            complement(9613..10392)
                     /locus_tag="WJK78_000797"
     CDS             complement(9613..10392)
                     /locus_tag="WJK78_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ7597746.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAITLIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPNMPRPKHIASFLLERTGGKA"
     gene            10676..12082
                     /locus_tag="WJK78_000798"
     CDS             10676..12082
                     /locus_tag="WJK78_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7597747.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIATDL
                     DESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFILGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRMYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTLS"
     gene            12194..13720
                     /locus_tag="WJK78_000799"
     CDS             12194..13720
                     /locus_tag="WJK78_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ7597748.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQAG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIESLL
                     "
BASE COUNT         2777 a         3693 c         3834 g         3416 t
ORIGIN      
        1 ttcgcgggaa tgacggtcgg gggtttctgt tttttccgat agattcctgt ggtttttcgg
       61 ttactggatt cccgcgttcg cgggaatgac ggggtgtaag tttctgctcc gacggggttg
      121 gattcccgct ttcacgggaa tgacgaagtt tcagacggca tttaagcggt acggatgtgt
      181 aaataatggt agggtgggct tcagcctgct gattcccgct attcttgccg tttttgcgtt
      241 cttatcattc tcactgtttt taccgttcac gccgaatcct gcaaactgat gccgtcattc
      301 ccgcgaaggc gggaatccag acccgtcggc acggaaattt atcgagtaaa acggtttctt
      361 agattctacg ttctagattc ccgcctgcgt gggaatgacg gtcgggtatc agcggaagaa
      421 gtcgcccact ccggggggta gaccttgcgt gaatgcgccc attgttttgt ttgcggtttc
      481 ttcggctttg ccccgggcgg atttgagggc ggcgaggatg aggtcttcga gcatttcttt
      541 gtcgtcggcg gcttcttgaa tcaaatcggg gctgatgtcg attttgcgta cttcgtgcgc
      601 gcaggtcatt gtgattttga ccaggccgtt gcctgcttcg ccttcgattt cggtttcggc
      661 aagtttggct tgcgcttttt tcatattttc ctgcatttgc tgcgcctgtt tcatcaggcc
      721 gcctaatccg gcttttccga acatactgaa tactcctgtc tgttttgatt gaatgaggga
      781 aacggcaatg ccgtccgaag ggttcgggcg gcattatatc tgtttatggc cggtttgctg
      841 ccaattccag tgattcgggc tgccattgcg cgccgaatgc ttggaggatt ttttgtgcgg
      901 cggggtcggc ttcgagcaat gcttgtgctt tttgcctgtc ttcggcttgg acgcgcttgt
      961 cctgcatcgc gggggtttcc ctgccggctt cgtcgcgcca gtcttgggtt tgcagggtga
     1021 gttgcagtcc gtaggcttgg gcaagggtgt cgcggatttt gtcgagacgt tttttgtcgg
     1081 cggtggcgcg ggcttcggcg gtcatcgcca aaaccatcag gccggtgtcg ggatggtatt
     1141 ccgtccacgc ggagtgttgc gccggcattt gcgccgcgcc gagtttgcgg gcgaaatgcc
     1201 ggacgatggc tgcccagttt tcggtggaaa attcgggcgg cggggcggac ggcgtgttgt
     1261 ttccgccgat gccgcctgct tctgcttctt cgtccgcgcc tccgcctgcg gtatcggcag
     1321 gggcggcgtg ttcccaatcg ggcggcggga tttctgcgtt gtcttctacg gggcagtcat
     1381 tatccggaaa gccgtaaccg tagaaaggtt ctgcaggggc ttcgtgtgca aatgtttccg
     1441 tttcaacggc ttcattattc ggtgttgcct gaatggggtt ttcagacggc gtttcggaca
     1501 agggggcatt ggtttcgttg tcggctgcct tgttcttgga aacttggttt tcgggcggcg
     1561 tttcggcttc ggatgccgtc tgaatgcttt ttgccgacgt ttgcgctgtg ccggctgcgg
     1621 tttgggcttc gtccggcgcg tcttcccaag gcggaacatc gttgttttct tgattggaaa
     1681 cgggttcggc agttttgctt tcagacggca ttgccgctgc ggatgccgtc tgaacggatg
     1741 tttgggcggt ttccgcttca gggcgcggtt ggggcttttt tgcggcggct tccttttcgg
     1801 cggtttgtac cgatggggat tgaagttcgg tattttcaat cacggcgttt gcatcacacg
     1861 aagctgccgc caagggcgca aacgccagca tacgcagcag ggtcatcata aagccggcgt
     1921 attcgtcggg ggcgaggccc aagtcgcgtt tgccgtggac ggcgatttgg tagtaaagct
     1981 ggatttgttc gccacctatg gtttgggcga ggcggtgcaa aatatcggaa tcggggtcgt
     2041 cgtgcgccaa ggcattcggc actgcctgta tcagggcgag ttgttgcagc agtatggcga
     2101 gttcgcccaa ggcgttgtca aagccgacgg cacacgccgc catttcccgc gctttggcgg
     2161 tcagggctgc gccgtcttgg ttgatgatgc ctgtcagcag ttcgtaaagg tattgtttgt
     2221 caaccgcgcc gatcatttgg cggacatcgt tttcggcaac tttgcccgaa cccagggcga
     2281 tggcttggtc gagcaggctt aaggcatcgc gcatcgatcc ggcggcggca cgtcccaaaa
     2341 gttgcagggc ggcgggttcg taggcgattt tttcgctgtc gaggacgtgg gcgaggtggt
     2401 cggcaacctg ctgcgcggtc atattgcgta agacgaattg caggcagcgg cttaatacgg
     2461 taacggggac tttgtgcgga tcggtggtcg cgaggatgaa tttgacgtgt tcgggcggct
     2521 cttccagcgt tttgagcata gcgttgaacg cgcttttgga aagcatatgc acttcatcga
     2581 tgatatagac tttgtatttg ccggcagtcg gcgcgtattg ggcgttttcc aagatttcgc
     2641 ggatgttgtc gatgcctgtg ttggaggcgg cgtcgatttc gagcaggtcg acatagcgtc
     2701 cggcatcgat ttgggtgcag ctttggcaca cgccgcaagg ttcgccgtgt tgcgcgtttt
     2761 cgcagttgag gcttttggca aggatgcggg cgatggtggt tttgcccacg ccgcgcgtac
     2821 cggtcagcag gtaggcgtgg tgcagcctgc cttcgtccag ggcgttttgc agggctttga
     2881 cgacgtgttc ctgaccgact aagtcggcaa aggttttggg ccgccatttt cgggcgagaa
     2941 cttgataggc catatttttc tcttggtttc ggtcgtgatg tttctgtcgg tgcgtcggaa
     3001 tgccgtctga acggcggtct cgggcggcgt attctagcac tttcggctta ctgtccgcgc
     3061 aagaacagtg cgtccaattc tttcaaagtc agtttgaccc aagtcggcct gccgtggttg
     3121 cattggttgc tgcgcggcgt gttttccata tcgcgcagca gcgcgttcat ttcgggcagg
     3181 gtaagtcggc ggccggcgcg gatcgagccg tggcaggaca tagtggcgag gatgcggttt
     3241 tcgtgttctt cgatggtttg gctgctgccg acttggacga gttcgtttaa tacgtctttg
     3301 gcgagggaga cgacatcggc tttgcccaac attgcgggcg cggcacgaac ggcgagggtg
     3361 ttgccgccca tatcggacag ttccagcccg aagcctgcca gtgtttcggc gtggtcggca
     3421 agggcggcgc attcttcgtg ggacgcggca aaggttgcgg gaataagcag gcgttggctt
     3481 tgcagcctgc cgttttcctg acgttggcgt ttcatttttt cgtagttgac gcgttcggcg
     3541 gcagcgtgca tatcgatgag cagcaggctg tcttcggctt gggcaagaat gtagatgcct
     3601 aatagttggg caatggcaaa accgagcggc ggcagttcgg attgggacgg gatgccgtct
     3661 gaaagcggcg tatctgtttg gggaataggc gtttcagacg gcatattgcc gaaacgtgcc
     3721 tgctctaatc ggcttaactc aaggtcgatg tcgtcggttt ttttgtaaag ctcggcgtaa
     3781 gtattcatgg ccgcgcggct ttcgcgcagg gagaggctgt gttgttgcgg cgcatatgcg
     3841 gactgatagg gcatgggcgc ggttttgcct gatgaaccaa aggcattgtg tgtatctgat
     3901 ttgttgcctg tcgggtagtt ggatgcgcga tcaaacagat tttcgctgtt gttttcagac
     3961 ggcattggtg caggcgtaac gccggtaatg tcatgcaaca cttcgcctgc gttgctgacg
     4021 ctttcggtca ggtcggcgcg tgtgtcggca agggctttgt tgagcgtgtg gaacacaagt
     4081 tggtgcacct gctgactgtc gcggaagcgg atttcggttt tggtcgggtg gacgttgaca
     4141 tccacggctt cgggcggcag gtcgagaaag aggacgaaag caggcgtcag tgcgttgtgc
     4201 aatacgtcgc ggtatgcctg cttgacggca tggagcatga ctttgtcgcg gacaaaacga
     4261 tggttgacga agcagtattg tttgtcggtt ttacctttgg cgaaagtcgg tttggcaatc
     4321 gcgccataga gccgcaatgc gccgttgtcg ctgtcaattt ccaatgatgc cgtctgaaaa
     4381 tcatcaccga caatggcggc aatccgttca tgcaagcttt gggttgggag tttgaatact
     4441 tgtttgccgt cgcgtttgag tgagaaggca atgtgcggat gcgccagtgc aaggcgttcg
     4501 agcatggtgg cgcagtgggc atattcggtg ttttcggatt tgaggaactt gcgtcgcgca
     4561 ggggtattga agaagagttc ggcggcttcg atggtggtgc cgacggggtg ggcggcggcg
     4621 gtggggctgc tgagtttgcc gtcttctgct ttgacttgag tcgcgtgcga actgtcttct
     4681 tgacggctgg tcagggtcag gcggctgacg gaggcgatgc ttgccaaacc ttcgccgcga
     4741 aagcccatac tggcaacgtg ttccaaatcg tttaaggttt tgattttgct ggtggcatgg
     4801 cggtggagcg ccagctcgat gtcgtccgga tggataccgc tgccgttgtc gctgacgcga
     4861 atcaggcgga tgccgccgcc cgccagctcg acatcaatcg ccgtcgcgcc tgcatctatg
     4921 ctgttttcaa cgatttcttt taaggcgttg gcggggcgtt cgaccacttc gccggcggcg
     4981 atttggttga cgagatggtc gggcagggcg gcaattcggg acatggcatg ggcttccgtt
     5041 tcaaaaaacg cttcattcta taataaaacc ccttaccttt ctgcctgtat tcttgataaa
     5101 agccgtttat cccgtttgga aaataccagt ataatcacgc catattccgt aaaattggag
     5161 cacaaagatg tatcactacc aatccgatgc cacacaattc ctcaaccgcc tgattgaaga
     5221 aaaacctgag ttggaacagc agcgtttgga aaacaggggg cttttgtggg atgtcgaact
     5281 tagtcccgaa gaacaggaaa acttcgaggc ggcaaaagta gcgaaaaaac cttataccta
     5341 ttaccaagac tgaacccgcc gaaatgacga ccaatctgtc caatgtcgca ccggacctgc
     5401 aaaactattt gaatgccatc ggcgaacccg aacatcccgt tttgacgcgg ctgcgtgaga
     5461 agaccgagca tcaccgtatg ggcaaaatgg cgattgcgcg cgaacaggcg gcggttttgg
     5521 tttggctggc aaagctgatt cgcgcggaaa aatatctgga agtcggcgtg tttaccggat
     5581 acagcagcac cgcgcttgca ttggcgttgc cagaacacgg gcggattacc gcctgcgaca
     5641 tcaatgtaac ctttaccgat acggcgcgtc aggtttggaa cgaggcaggt gtggcacata
     5701 aaatcagcct gcacctgcaa cccgcattgc tgacattgga tgatttgatt gcacagggtg
     5761 aagccggaag ctacgatttg gcactgatag acgcagacaa accgcccacg ccgcgatatt
     5821 tcgagcgttg cctcaagctt gtccgtcaag gcggcatcat cgccatcgac aatattttgc
     5881 tgaacggaag ggtgatgcgc gaagcggctt ccgatgcgcc gcccagcgtc ggcatcctca
     5941 aagatttcaa tcaaaacctg ccgaacgata cgcggattgt ccccatcacc ctgcccgtcg
     6001 gcgacggctt gaccctgctt ctgaaaaaat aatgaagacc aaattaccgc tttttatcat
     6061 ttggctgtcc gtatctgccg cctgttcttc ccctgtttcc cgcaatattc aggatatgcg
     6121 gcccgaaccg caggcagagg caggtagttc ggacgctatt ccctatcccg ttcccactct
     6181 gcaagaccgt ttggattatc tggaaggcac actcgtccgc ctgtcgaacg aagtggaaac
     6241 cttaaacggc aaagtcaaag cactggagca tgcgaaaaca cacccttcca gcagggcata
     6301 cgtccaaaaa ctcgacgacc gcaagttgaa agagcattac ctcaataccg aaggcggcag
     6361 cgcatccgca cataccgtcg aaaccgcaca aaacctctac aatcaggcac tcaaacacta
     6421 taaaagcggc aggttttctg ccgctgcctc cctgttgaaa ggcgcggacg gaggcgacgg
     6481 cggcagcatc gcgcaacgca gtatgtatct gttgctgcaa agcagggcgc gtatgggcaa
     6541 ctgcgaatcc gtcatcgaaa tcggagggcg ttacgccaac cgtttcaaag acagcccaac
     6601 cgcgcccgaa gccatgttca aaatcggcga atgccaatac aggttgcagc agaaagacat
     6661 tgcaagggcg acttggcgca gcctgataca ggcttacccg agcagcccgg cggcaaaacg
     6721 cgccgccgca gccgtgcgca aacgatagtt tttccatttt tccgcttttt accccatccg
     6781 caccaaggag gatttatgat acaaatcggc atcatcatgg gcagcaacag cgattggccc
     6841 gttatgcggc aggcagcgca gtttcttgaa gagttcggcg tagaatatga ggcgcgcgtt
     6901 gtttccgcac accgcacccc ggatttgatg ttccaatacg ccgaaaccgc acgggcgcgc
     6961 ggcatcaaag ccatcatcgc gggtgcgggc ggcgcggcgc atttacccgg tatggttgcc
     7021 gccaagacca ccgtccccgt tttgggcgta cccgtcccca gcaaatacct gcgcggcgaa
     7081 gattcgcttt tatcgattgt acaaatgccc aaaggcgtac ccgtcgccac attcgccatc
     7141 ggcgaggcag gcgcggcaaa tgccgcattg ttcgccgttt ccatgctcgc caacgaaacc
     7201 cccgaactgg cgcaaaaact ggcagacttc cgagccaaac aggaacaggc tgttttgaat
     7261 atggaattgg aacaaattta aaacccaccg tctgcgaata tatagtggat taaatttaaa
     7321 ccagtacggc gttacctcgc cttgccgtac tatttgtact gtctgcggct tcgtcgcctt
     7381 gtcctgattt ttgttaatcc actatacaaa tgccgtctga agccctgttt cgggtttcag
     7441 acggcatttt tgcgaacaac tttttatgcc tgttcttttt ggcgcatttt ttctgccatt
     7501 agttcgtgca aggttttctt cgccggtttc atcggcacgc ggttttgcgt ccaacccaac
     7561 tgtttgcgtg gggtcaggtt gcggaacttg gtggctgccc aaccgaaggc gcggtaggtt
     7621 ttgctgccgc tgaaaatacc gttgaatgtg cgccacgcca tttgttcgcc gaaggtatgc
     7681 gatgcgcctt gccctcggat ggggtgcggc acggtttcgg tcggcgaacg ttgcgcttca
     7741 acacgcagac gttgcatttg ttcggtaatc ggaatgcgta ccggacaaac ttcaacgcac
     7801 gcgccacaca tagtacacgc agtcggcaga tcgcgtgtcg catccaagcc caacaaatgc
     7861 ggagagataa tctcgccaat cgggccggga taagtcgtac cgtaagccgc accaccgata
     7921 cgggtataaa ccggacagtg gttcatacac gcaccgcaac ggatacattg caaggtgcgg
     7981 cgcatttgat cttctgcgta agcttggctg cggccgttgt cgagcagaac caagtgcatt
     8041 tcttgcggac cgtctaattc ttcactgcgg cgcgggccgg taatcatatt gaaataggtt
     8101 gtgatgtttt gaccgatggc ggagcgcggc agcagactgt acaagggtgg gatgtcggac
     8161 aatttcgcca ccactttttc aatgccggta atagcgatat gcacgggcgg tacggtggta
     8221 ctcaagcgac cgttgccctc gttttccacc agacacagcg tacctgtttc agcaacggca
     8281 aagtttacgc cactcaaacc gacatcggca gtgctgtaaa tatcgcgcag tgctttacgg
     8341 gcgaagccgg tcagttggtc tacatcgtct gtcagcggcg taccgaggtt ttggtggaac
     8401 agttcgctaa cctgttcttt ggttttgtgg atagcaggca tcacgatatg ggtcggtttt
     8461 tcacctgcca tttggacgat gaactcgccc aagtcgcttt ccaccgcttt aatgcctttt
     8521 gcttcaagat aatggttcag ctcgatttcc tcgctgacca tcgatttgcc tttgaccatc
     8581 agcttgccgt ttttggctgt gatgatgtcg tggatgattt cgcaggcttc ggccggtgtt
     8641 tccgcccagt gtacttttac gcccaacttg gtcaggtttt cttccagctg ctccagcagg
     8701 gcaggcaatt tagacaatga gcgctgacgg acgtgttcgc acaaatcgcg caagctttgc
     8761 agctcttctt cgtcggtcaa aacagctttg cgtttggtca tcagcatatc catcgcggta
     8821 cgcaggcttt tacgcaaagg cttgtcttga agggaaattg cggcgttttg cttgaaagtt
     8881 tccggcttca tgtgaaattt gatggtttgc gtagtcatgc gttttcctcc aaatcggtag
     8941 gggaaatgtg gtcgggcagg atggcgagga taaccaaatc acgcggaccg tgcgcgccgt
     9001 aagcaagcgt cagttggatg tctgcggttt tggacggacc ggaaatcagg aatacattgg
     9061 tcggcatacc gttttccacc agtttttcgc cttcgacggc attatgaaac tcgttgtaca
     9121 tcttggacgt atcgaacagg cagaaatgca cgggcggaac gagactcaaa gtacgcggct
     9181 cttcggggct ggaaaacagc atcagcgtgc cggtgcgggc gatgccgcat tgcgcgccgc
     9241 tgaagcccgc atcgatgttc gtgaaaaact cggttttcca agtatcgatt tcgcgctcga
     9301 aggcaatcgg ttcgatattg ctgtccgcca atgcggcacg ggcaatttgt ccgtgttcgg
     9361 tcgccaaggg cagcaggatg tttttcaaac ccttgccttc tgccgcttcg cggaaaacct
     9421 gcatccaatt gcttttcgtc acccaataaa tttcggtttt gaccgcgcgc attgcggcag
     9481 cccaatgttt cagacgctcg gcttcgctgc cccaagaaac acccatttca cggtaataat
     9541 caaaaaccgc aggttcttcc atcggcaatg cgtcggcttt tttcagtttt gccaaaatat
     9601 tttcgcgcgc gctcatgctt tgcctccggt acgttccaac aagaaggatg cgatatgttt
     9661 cggacgcggc atattcggtt cgtccttagc aattttgccg ccgatgttca tcatacagcc
     9721 gcagtccgcg ctgatgattt cggttgcgcc ggtttctttc agcgcggcga ctttgtcggt
     9781 taccatcgcg ccggaaatat cggcttgttt gacggagaat gtgccgccga agccgcaaca
     9841 ttcgctttcg tggtcgtgga cgatgcgttc gacgttttcc ataccgtcaa tcagttgcca
     9901 gcccgagaga tggacattca tttcgcggcg ggcggcgcag gaagtgtgaa cggcgacttt
     9961 gagcggttcg cccttgtctt cgggtttgaa accgatggca agcaggaaat gggtaaactc
    10021 gatgatgcgg ccggcgcaat ccacagccct ttcctcgtac tcgctgcctt taaacagcgt
    10081 cggccaatgg tgcttcatca taccgccgca cgaaccggac ggtacgacaa tcggccactc
    10141 ctcggggaaa aggtcgagtt gcgctctggc gacatcaaag gcttcggtcg gatggccgga
    10201 tgaataggcg ggctgaccgc agcagctttg cgccatcggg aaatggacgc gtatgccctg
    10261 ttgctcgatt agggtaatgg catccatgcc tgcttcgggc ataaaaagat caaggacgca
    10321 agtgccgaaa aaatagacat cggtcggatt gctgtcgtat cggatgattt ttgggggaat
    10381 ggttgcgctc atgttttttg ataacgggaa acccgttttt ttctgtagaa aggtaagcgt
    10441 ttactttaag taattgactg ttgcgggtca agtctaattt taaaaaataa tccggttttt
    10501 cttacaaact gccccataac gcttactgta ccttactctg ataattttcg ataataatta
    10561 tcattacaat gaaatgccga ttcgtttgct tgtgaacatt caggacgccg actctgacgg
    10621 cattcagaca gcatctgaaa acaataacgg cacaaggatg gggtacaatc gccctatgga
    10681 aaaaaacacc ctatccgccc gcgcaccatc cccttggctg ccgcttctgc tggcaattgc
    10741 catttttatg cagatgttgg atgcgaccat tttaaatacc gcactgcctg aaattgccac
    10801 cgacctggac gaatcgcctc tggatatgca actggcagtc gttgcctata cgctgacggt
    10861 tgccctgctg attcctttga gcggttattt ggcggacagg ttcggaacga aaaaagtctt
    10921 tttcggttcg attgccgttt ttatactcgg atcggcattg tgcgccgcat cgggttcgct
    10981 gtttgaattg acgctttccc gtgtcgttca gggcatcggc ggttcgatgc tggttccgat
    11041 accgcgtctg accatcttgc gtatgtacga caagtccaag ctgctcaatg ccatcaatta
    11101 tgcggtcatg cctgcattaa tcgggccggt tttagggcct ttggcgggcg gttatttggt
    11161 cgaatacgct tcgtggcact ggattttcct gctcaacctg cccatcggtc tgctgggttt
    11221 catattggga cgcaacatca tgcccgatat taaaggcagc aatatctctt tagacttcaa
    11281 aggctatctg attttttctg ccgccgcgtg cctcttgtta ctttcggcag aaagcctgtc
    11341 gcacgcgctg cctccgtatt ttgcactgtt gccgctgtgc ggcggactgc tgtttgcacg
    11401 ccgttatttc cgacatatga aaaccgcgtc caaaccgatt tattccgccg acctgtttct
    11461 gatacgcact ttccgtctag gactggcggg caatctgttc agccgtctcg gcatcagctc
    11521 gattcctttt ctgatgcccc tgatgtttca agtcgctttc ggcttcggcg caagcctgtc
    11581 gggttggctg gtcgcccccg tcgccctgtc ttcgctgctg gtcaaaccgc tgattgcacc
    11641 gctcatgaaa cgtttcggct accgcacggt actgctttgg aacaccaagc tgcttgccgc
    11701 cttcatcatg ctgctcgccc tgcctgacgg aaactcgtcg ctgtggattt ggattttcct
    11761 ctcgctggcg atcggcgcgt gcaactccct gcagttttct gccatgaata cactgaccct
    11821 cgccgatttg cgcccgcaac agaccggcag cggcaacagc ctgatggcgg tcaaccaaca
    11881 gcttgccatc agcatgggca ttgttgtcgg cgcattaatc cttaaaaact ggacatttct
    11941 gataccggct tcttcaggtc tgcattccgc cttccgtatg accctgctca gcatcggcgg
    12001 catcaccctt gcctcgtcgt tggttttcaa gcgtctgcac gtttcagacg gcgcaaacct
    12061 gacacggaac acactgtcct aaagcggtcc gcacgcaaaa cttttacccg tttcaacgtt
    12121 tggattatga ttccgcacat ccatgcgcgc caaccccaaa acacaggcaa tgccgtctga
    12181 aaccatatcc ctgatgaaaa cacgcagcct aatttccctt ttatgcctcc ttctctgttc
    12241 atgttcttca tggttgcccc cactggaaga acggacggaa agccgtcatt tcaatacttc
    12301 caaacccgtc cgcctggaca acatcctgca aatccggcac acccctcata ccaacgggct
    12361 atccgatatc tatctgctga acgaccccca cgaagccttt gccgcccgcg ccgcccttat
    12421 cgaatctgcc gaacacagcc tcgatttgca atactacatc tggcgcaacg acatttccgg
    12481 ccgactgctg ttcaacctcg tgtaccttgc cgcagaacgc ggtgtgcgcg tacgcctgct
    12541 gttggacgac aacaacacgc gcggattgga cgacctcctg ctcgccctcg acagccatcc
    12601 caatatcgaa gtgcgcctgt tcaacccctt cgtcttacga aaatggcgcg cactcggcta
    12661 cctgaccgac ttcccccgcc tcaaccgccg catgcacaac aaatccttta ccgccgacaa
    12721 ccgcgccacc atactcggcg gacgcaatat cggcgacgaa tacttcaaag tcggtgagga
    12781 caccgttttc gccgacctgg acatcctcgc caccggcagc gtcgtcggcg aagtatcgca
    12841 cgacttcgac cgctactggg caagccattc cgcccacaac gccacgcgca tcatccgcag
    12901 cggcaacatc ggcaagggtc ttcaagcact cggatacaac gacgaaacgt ccagacacgc
    12961 gctcctgcgc taccgcgaaa ccgtcgaaca gtcgcccctc taccaaaaaa tacaggcagg
    13021 acgcatcgac tggcagagcg tccaaacccg cctcatcagc gacgaccctg caaaaggact
    13081 cgaccgcgac cgccgcaaac cgccgattgc cgggcggctg caagacgcgc tcaaacagcc
    13141 cgaaaaaagc gtctatctgg tttcacccta tttcgtcccc acaaaatccg gcacagacgc
    13201 actagcaaaa ctggtgcagg acggcataga cgttactgtc ctgaccaact cgctacaggc
    13261 gaccgacgtt gccgccgtcc attccggcta tgtcaaatac cgaaaaccgc tgctcaaagc
    13321 cggcatcaaa ctctacgagc tgcaacccaa ccatgccgtc cctgccacaa aagacaaagg
    13381 cctgaccggc agctccgtaa ccagcctgca cgccaaaacc ttcattgtgg acggcaaacg
    13441 catcttcatc ggttcgttca acctcgaccc ccgttccgcg cgtctcaaca ccgaaatggg
    13501 cgttgttatc gaaagcccca aaatcgcaga acagatggag cgcacccttg ccgataccac
    13561 ccccgaatac gcctaccgcg ttaccctcga caggcacaac cgcctgcaat ggcacgatcc
    13621 cgccacccga aaaacctacc cgaacgaacc cgaagccaaa ctttggaaac gcatcgccgc
    13681 aaaaatccta tccctgctgc ccatagaaag tttattatag
//
LOCUS       DAWKOX010000038        13666 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.038, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000038 DAWKOX010000000
VERSION     DAWKOX010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13666
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.038"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(78..278)
                     /locus_tag="WJK78_000800"
     CDS             complement(78..278)
                     /locus_tag="WJK78_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597749.1"
                     /translation="MIGRLFRIFFFLALAALIINRLFSRRQKRALREVAEISAWVLLG
                     AAAAMLFWYLFMLYFKHIPDSY"
     gene            428..1567
                     /locus_tag="WJK78_000801"
     CDS             428..1567
                     /locus_tag="WJK78_000801"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ7597750.1"
                     /translation="MSQNASVGIVMPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPLVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            1564..2145
                     /gene="metW"
                     /locus_tag="WJK78_000802"
     CDS             1564..2145
                     /gene="metW"
                     /locus_tag="WJK78_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ7597751.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTSNRQVKHFPNLLGSLAFYRVG"
     gene            2262..3098
                     /locus_tag="WJK78_000803"
     CDS             2262..3098
                     /locus_tag="WJK78_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ7597752.1"
                     /translation="MKNKTSSLLLWLTAIMLTACSPNKNDKTKEVGASAASSSASSAS
                     SQSDLQPAASAPDNVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALSHHE
                     LETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDALME
                     QERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYIGQL
                     PGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNPNLG
                     RR"
     gene            complement(3148..3708)
                     /gene="efp"
                     /locus_tag="WJK78_000804"
     CDS             complement(3148..3708)
                     /gene="efp"
                     /locus_tag="WJK78_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ7597753.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(3751..4902)
                     /gene="earP"
                     /locus_tag="WJK78_000805"
     CDS             complement(3751..4902)
                     /gene="earP"
                     /locus_tag="WJK78_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ7597754.1"
                     /translation="MNTYAFPVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWT
                     DDVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDAVIETFACDLPENVLH
                     IIRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYCE
                     AVRFDSEALRQRLMLPEKNAPEWLLFGYRSDVWAKWLEMWQQAGSPMTLLLAGTQIID
                     SLKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVR
                     AQLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYTPETASAHRRLSDDLNGGEALSA
                     TQRLECWQILQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(4921..5199)
                     /locus_tag="WJK78_000806"
     CDS             complement(4921..5199)
                     /locus_tag="WJK78_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597755.1"
                     /translation="MFRNLLVRWLAVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKHQTMFLFIPIVLLVVYLFHYFGAF"
     gene            complement(5245..5554)
                     /locus_tag="WJK78_000807"
                     /pseudo
     CDS             complement(5245..5554)
                     /locus_tag="WJK78_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146840.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5553..6494
                     /gene="miaA"
                     /locus_tag="WJK78_000808"
     CDS             5553..6494
                     /gene="miaA"
                     /locus_tag="WJK78_000808"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ7597756.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSASERAFVPHHLIDIIPPTESYSAARFVEDCTRLVGEISSRGRFALIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSLTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRRYPSLTADSPAIRCVGYRQAWKYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSCTRLIEAAKRFFGA"
     gene            6498..7217
                     /locus_tag="WJK78_000809"
     CDS             6498..7217
                     /locus_tag="WJK78_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEZ7597757.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLESLLDGTPPQEMSQAHKARLLAELKNHPPVAAFPPQEEMEHFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIAAAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            7222..7710
                     /locus_tag="WJK78_000810"
     CDS             7222..7710
                     /locus_tag="WJK78_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEZ7597758.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTTFKIGCAVSILFILLVKYIAY
                     LF"
     gene            7776..8528
                     /gene="rlmB"
                     /locus_tag="WJK78_000811"
     CDS             7776..8528
                     /gene="rlmB"
                     /locus_tag="WJK78_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ7597759.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(8590..9982)
                     /locus_tag="WJK78_000812"
                     /pseudo
     CDS             complement(8590..9982)
                     /locus_tag="WJK78_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
     gene            complement(9997..10251)
                     /locus_tag="WJK78_000813"
     CDS             complement(9997..10251)
                     /locus_tag="WJK78_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597760.1"
                     /translation="MLPIVAYFTAGVKSGGSGMHGAAWRRMRRVCIFVFEIRLLRFAN
                     DIPAATVRNLFAGRARMPSEIEIEAVWRIRYNPRFGFFNI"
     gene            10289..11164
                     /locus_tag="WJK78_000814"
     CDS             10289..11164
                     /locus_tag="WJK78_000814"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ7597761.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGIYRHFKAVAEAAAIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            11173..12369
                     /gene="bamC"
                     /locus_tag="WJK78_000815"
     CDS             11173..12369
                     /gene="bamC"
                     /locus_tag="WJK78_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ7597762.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGSLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKNPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(12426..13358)
                     /gene="pip"
                     /locus_tag="WJK78_000816"
     CDS             complement(12426..13358)
                     /gene="pip"
                     /locus_tag="WJK78_000816"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ7597763.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKDWADWESYLICFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIQHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLVDALVQAVEDILPHLL"
BASE COUNT         3456 a         4110 c         3357 g         2743 t
ORIGIN      
        1 cacctcctac cgcaagccct tttcatcaaa tatgccgtct gaaacagaaa aatgcgtttc
       61 agacggcata ttttccgtca atacgaatcc ggaatgtgtt tgaaatacag cataaacaga
      121 taccaaaaca gcatcgcggc ggctgcaccg agcagtaccc atgcgctgat ttcggcgact
      181 tcgcgcaggg cgcgtttttg cctgcggctg aaaaggcggt tgataatcaa cgcggcaagt
      241 gctaaaaaga aaaaaatacg gaaaagtctg cctatcatgt cgggaagcgg tggaggtcgt
      301 ctgaaaaagt atgattcgtg tgcggcggat gagggtcaaa cgcgtccggc tgcttgtccg
      361 accgtgtcaa aaagtcatgc cgtttgcgat ataataacgc ttttcgccgc atttgttgga
      421 acaggatatg agtcaaaatg cctcggtggg cattgtaatg ccccaaaaaa ttccgtttga
      481 gatgccgctg gttttggaaa acggtaaaac tttgccgcgt ttcgatctga tgattgaaac
      541 ctacggcgag ctgaatgctg aaaaaaacaa tgcggtttta atctgccacg cgctgtcggg
      601 caaccatcat gttgcgggca ggcattcggc ggaagataaa tatacgggct ggtgggacaa
      661 tatggtcgga cctggcaaac cgattgatac ggaacgtttt ttcgtggtcg gtttgaataa
      721 tctgggcggc tgcgacggca gcagcgggcc tttgtcgatt aatcctgaaa cgggcaggga
      781 atacggcgcg gattttccgc tggttacggt gaaggactgg gtaaaatccc aagccgcgct
      841 tgccgattat ctcggcatcg ggcaatgggc ggcggttgtc ggcggcagct tgggcggcat
      901 gcaggctttg cagtgggcga tttcctatcc cgaacgcgtg cgccacgcct tggtgattgc
      961 gtccgcgccg aaactgtcca cgcaaaatat cgcgttcaac gatgtggcgc gtcaggcgat
     1021 tttgaccgat cccgatttca acgaaggaca ttaccgcagc cgcaacaccg ttcccgctcg
     1081 gggcttgcgg attgcccgca tgatggggca catcacctat cttgccgaag acggtttggg
     1141 caaaaaattc ggacgcgatt tgcgttccaa cggctatcaa tacggctatg gcgttgaatt
     1201 tgaagtagaa tcctatctgc gctatcaagg cgacaaattc gtcgggcggt ttgatgccaa
     1261 cacctatttg ctgatgacca aggctttgga ctatttcgat ccggcggcgg atttcggcaa
     1321 cagcctgacc cgcgccgtgc aggatgttca ggcaaaattc tttgtcgcca gcttcagcac
     1381 cgattggcgt ttcgcgcccg aacgttcgca cgaactggtc aaggccctga ttgccgccca
     1441 aaaatccgtg cagtatatcg aagtcaaatc cgcacacggg cacgatgcct ttttaatgga
     1501 agacgaagcc tatatgcgtg cggtcgccgc ctatatgaac aacgtttata aggaatgtca
     1561 gcaatgaacc tgcgcgatga tttgcaactg atttacgacc ggatacccga aggcagccgc
     1621 gtcttggact tgggctgcgg cgacggcgaa ctgcttgccg cattggtcga acacaaaaaa
     1681 tgcagcggct acggcatcga aatcgacacc gacagcgtca tcgccgcgat gtcgcgcggc
     1741 gtaaatgtta tccaagccga tttggaagaa ggtttaaccg cattcaacga tcaaagtttt
     1801 gatgtgattg tgttgagcca aaccatccaa gcgatgcaga ataccgaaaa aatcctgcgc
     1861 tgcctgatgc gcgttgccaa acaggcgatt gtcagcttcc cgaatttcgg ctactggcgc
     1921 aaccgcgtcc aaatcgcact cggcggacat atgccggttt ccgaacgtat gccctaccat
     1981 tggtacgaca cgcccaatat ccattggtgc acgctcaaag attttgattt gttgtgcgcc
     2041 aaaaacaaca tccgcgtcct cgaacgcgcc gtgatgacga gcaacagaca ggtcaaacat
     2101 ttccccaacc ttttgggcag cctggcgttt taccgcgtcg ggtaagacag gttgagaacc
     2161 ttgtcggcaa taacaggttc ttcggttcta ttaacaacag gccgtctgaa aaatgaaacg
     2221 gtaggttttc agacggcctc tttaatactg gaaacaatag aatgaaaaac aaaacctcat
     2281 cacttctctt atggcttacc gcaatcatgc tgaccgcgtg ttctccgaac aaaaacgata
     2341 aaaccaaaga agtcggtgca tctgctgctt cgtcctccgc gtcatcagct tcttcccaat
     2401 ccgatttgca accggccgca tccgcccctg ataacgtcaa gcaggcagaa agcgcgccgc
     2461 cgtcaaattg caccgacctg caccccgcca ccggcattga cgatctcatg cagcaaatcg
     2521 ccgaacacat cgactcggac tgtctgtttg ccctttccca tcacgaactg gaaacccgtt
     2581 tcggcttacc cggcggcggc tatgacaaca tacagcggct gctgtttccc gacatccgcc
     2641 ctgaagatcc cgactaccat cagaaaatca tactggcaat tgaagacttg cgttacggaa
     2701 agcgcacgat cagccggcag gcacaagatg ccttgatgga acaggaacgc cgcctccgag
     2761 aagcgacgct gttgctgata cagggcagtc aagaaacccg cggacaaggc gaggagccga
     2821 aacgcacgcg ttattttgaa gtttcggcaa cccctgccta ttcgagccgg cacaacaacg
     2881 gacttggcgg caatttccaa tacatcggcc aattgcccgg ctatctgaaa atacacggag
     2941 aaatgcttga aaaccaatca ctcttccggc tgtccaaccg tgaacgcaat cccgacaaac
     3001 cgtttttaga catccatttt gacgaaaatg gcaaaatcac gcgtattgtc gtttacgaaa
     3061 aaaacatcta cttcaatcca aacttggggc gaagataaaa aaatgccgtc tgaaacgttt
     3121 tcagacggca tttttcaatg caacaaatca agcgcgtttg cggaattcgc cggtgcgggt
     3181 atcgatttcg actttgtcgc cgttttcgat gtaagacatc acttggattt cggtgccgcc
     3241 gaccaggcgc gcggttttca tcactttgcc ggaagtgtcg cctttgacgg caggctcggt
     3301 gtactcgact tcgcgcacga tgatggtggg cagttcgaca gaaatggggt tgccttcgta
     3361 gaaggtaact tcgcattggt cttccatacc gtcaacgatg aatttcaacg cgtcgccgat
     3421 gttgtcggct tcgatttcgt attggttgaa ttcttcatcc ataaagacgt acatcgggtc
     3481 ggcaaagtag ctgtacgtac agtttttgcg ggacaggatg accacgtcga atttgtcgtc
     3541 ggctttgtaa atggtttcgg aagccgcgcc ggtcagcagg tttttcagtt tcatgctgac
     3601 tttggcggaa gagcggccgc ctttgatgta ttcggttttt tgaacgacca taggatcgtt
     3661 gccgaccata aatacattgc cggcgcgcag ttcttgtgct gttttcattg tgattttcca
     3721 atcaaatcgg ttgtcgtaaa acgcgctatt ctagcgtatt ttttgatgct ttgaaacaaa
     3781 ggcggcgagt ttttcggatg cggaaggctg cccgaaaaga taacggctcc aatcctccgc
     3841 gccttgccgc cagccgtttt gatgttgttg caggatttgc caacattcga ggcgttgtgt
     3901 tgcggataaa gcctctccgc cgttgaggtc gtctgaaagg cggcggtgtg ccgatgcggt
     3961 ttcgggcgtg tagaaaccgt gtgccttatc ccaaaaggcg tggagtttgt cgagatggac
     4021 attctcgtct tgcggataga tgtgccaaaa gaagggtttt ccggcaagct gggcgcgcac
     4081 gaaactgtct tcgccgcgga tgacggcgca gtcggcaagg tgcagcagtt tgtcgaagtc
     4141 ctgttgcggc acgaaaggga ttttgacgag gcggacggat gccgtctgaa aaacatcgcc
     4201 gtcgttttgc agggcatctt gcggaataac gccgctttgt ttgaggctgt cgatgatttg
     4261 cgtccccgcc agcaacagtg tcatcgggct gcctgcctgt tgccacattt ccagccactt
     4321 tgcccaaaca tcgctccgat agccgaaaag cagccattcg ggggcgtttt tttcgggaag
     4381 catcagccgc tgacgcaggg cttcgctatc gaaacggacg gcttcgcagt aatcgcgttc
     4441 gcgtatcagt ccgccgcttt tttcgctgaa acccataaac caaaaatatt tttgaacacc
     4501 ttcctgcggc gaaggcatca ggtgcagcct ttcattgctt tcctccgcgc tcaaatattc
     4561 ccaattcagc caaagcggct tgtgtcggcg gataatgtgc agcacatttt cgggcaggtc
     4621 gcaggcaaaa gtttcgatga cggcatcggg aacaggcgcg gtatcaatat ctgccgcatc
     4681 ggaatgccaa gtgcggacat gaatatcctg atgaacgcag ggaacatcgg gcaaatcagg
     4741 gcaaagcgcg cgcaaggcgg acacatcgtc cgtccacaaa tgcacctgcc aaccgagttc
     4801 gcggtgcaaa acacgggcaa gccgccacga aacgccgatg tcgccgaaat tgtcgatgac
     4861 cttgcaaaaa atccaacaga caggaaaagc gtatgtattc ataaccatct agaaaacaag
     4921 ctaaaatgcg ccaaaataat ggaacaaata cacaaccagc aaaacaatcg gaataaacag
     4981 aaacatagtt tgatgtttca aatcaaactc ttgtttcaaa tgatgcttga tggtgtcgaa
     5041 aaggacgaat ttgaacagaa acgtcgcttc gcaggcaagg atgatgccgt taatcagatg
     5101 ctggggtttg tcttcgggcg gattggcggc gaaaacggca agcgtcgcca agggtatcag
     5161 gcagacggca agccagcgga caagcaggtt tcggaacatc gcaaggcttt caaacaaaaa
     5221 aagcaaaacg ccattatcgc cccaagcacg cgccttgtct aacggatgcg ccgacgatgc
     5281 cgtctgaagc cttgccgcag gaaaacaccg caccgccgaa cctttaaata cgcccgagac
     5341 gggcgttccc cgaaaaatcg gacgctgccg ccgatgcctg aggacaaggc tgcatcgggc
     5401 gcgggcatat tgaaaacccg gcgcgtcggt ttgaaatttt ataaaggcat acggtaaaca
     5461 cgcccccttg ccgtcggcgt gcttccgcaa accaaaatat aacgtcggca cgctttccgc
     5521 tataatccgt atttttccaa acctgaaacg ttatgccgac cccgaaagcc tttgccctgc
     5581 tcgggccgac cgccggaggc aaaaccgcgc tcgccctcaa aattgccgaa accctgcctg
     5641 tcgaaatcat cagcctcgat tccgcgctgg tttaccgcga tatggacatc ggcacggcga
     5701 aaccgtccgc ctccgaacgc gcctttgtcc cgcaccacct tatcgacatc atcccgccta
     5761 ccgaatcata cagcgccgcc cgctttgtcg aagactgcac gcgcttggtc ggggaaattt
     5821 cctcacgcgg caggtttgcc cttattgtcg gcggcacgat gatgtatttc cgcgccctga
     5881 cccaaggttt gaacgatttg cccgaagccg acgcctgcct gcgtgccgac ttggacgaac
     5941 aaaaacagat gtacggcttg gatttcctct accgcaccct gcaaaaagtc gaccctgaaa
     6001 ccgcatgccg tctgaaaccg aacgacagcc agcgtatcgg acgcgctttg gaagtttatt
     6061 atttaaccgg caaaccgatg agcacacatc tcggcagcct gacctcccat acgctccctt
     6121 ttgatttgca taccgccgcc ctgattcccg aaaaccgcgc ccgcctgcat gaaaacatcg
     6181 ccctgcgttt ccacctgatg cttgaacagg gctttatcgg cgaagtggaa aacctgcgcc
     6241 gccgctatcc cagcctgacc gccgactccc ccgccatccg ctgcgtcggc taccgtcagg
     6301 catggaaata tctggatgga aaaaccgatt tcccggcatt tgtcgagaaa ggcattgccg
     6361 ccacccgcca acttgccaaa cgccaactga cttggttgcg caaaacacct ttagactgcg
     6421 ttgccgaccc gttttcagac ggcacttcat gcacacgcct gattgaggcg gcaaaacggt
     6481 ttttcggcgc ataaaccatg ctgaccacac cgccgctcgc ccccaaaacc gtcgccgccc
     6541 tgcacaggct cggtatccgt acgctcgaag aactgcggca aaacggttcg gtcaaagcct
     6601 ttctgctgct caaagcatcg ggtttgaccc tcacgaaaag cacgctgtgg caactcgagt
     6661 cgctgctgga cggcacgccg ccgcaagaaa tgtcccaagc gcataaagct cgcctgcttg
     6721 ccgaattgaa aaaccatccg cccgtcgccg cctttccgcc gcaggaagaa atggaacact
     6781 tcatgcgcga agcactgcgc caagcagaac aatccgccgc cgacggcgaa atacccgtcg
     6841 gggcagtcat cgtttcagac ggcaaaatca tcgcggcggc acacaacacc tgcattgccg
     6901 actgcaatgt cagccgccac gccgaaatca acgccctggc acaggcaggc agcgaaatgc
     6961 aaaactaccg ccttgacgga tgcgacatct acatcaccct cgaaccctgc gccatgtgcg
     7021 cgtccgcact gatacaggca cgaatcaggc gcgtgatcta cggtgcggca gaacccaaaa
     7081 ccggcgcggc aggaagcatc gtcaacctgt ttgccgacaa acgcctcaat acgcacaccg
     7141 ccatacgggg cggaatcctg caagaagaat gccgcgccgt attaagccgt tttttccaaa
     7201 acaaaagaaa aggttgaacc tatgaccgcc ttgctcgtca tcctcgccct cgccctgata
     7261 gccgccggta cggcgggcat cgtttacccc gccctgcccg gattggcatt gatgtttgcc
     7321 ggaacctggc tgctcgccta ctccggcggc taccaaatct acggcgcggg cgttttgtgg
     7381 acggtcggac tcatcagcct tgccggcata ctggcggact atgtggcagg catatggggg
     7441 acaaaatata ccggagcggg caagctcgcc gttcgcggcg cattggtcgg cagcatcatc
     7501 ggcatatttt tctcccttcc cggactaata ctcggtccct ttatcggcgc ggcggcaggc
     7561 gaactgatcg atcggcgcaa tatgcttcag gcaggtaaag cgggcttggg tacgctgttg
     7621 gggcttatcg tcggtacgac attcaaaatc ggctgcgccg tatccatctt gtttatcctg
     7681 ttggtgaaat acatcgccta cctgttttaa ccccttcaga cggcataccg gcaaattgct
     7741 ataatgccgt ctgaaccctt ttcacaaagc accatatggc aaaccaaaga cctatctacg
     7801 gcttccatgc cgtcaacgcc cgattgtggc aaaaccccaa atccatcgtc gaactctatg
     7861 tccaagaagg caaaaacgat gtacgcacgc gcgaagtgtt ggaaaaggcg gcaaacgaaa
     7921 acatccgcgt atattttgcc gatgccgacc gcctcaacgc catcagcaaa ggtgcgcgcc
     7981 atcagggcgt ggtcggattt atcgatgcct ccaaaaacca cgtccacctc gaagacgtat
     8041 tggaaaactt aagcgaaccg ccgctgctgc tgatactcga cggcatcacc gatccgcaca
     8101 acctcggcgc gtgcctgcgt accgccgacg caatgggcgt acatgccgtc atcgcaccga
     8161 aagacaaaag cgcggggctg aacgccaccg tcagcaaagt cgccagcggc gcggcggaaa
     8221 ccgtccccta catcaccgta accaacctcg cccgcaccct gcgcgagctg aaagaatacg
     8281 gcatttggat catcggcacc gatatgggcg gcaacgccga cctttaccat tgcgatctgc
     8341 ccgacagcgc ggcatgggtg atgggcaacg aaggcgacgg tatgcgccgc ctgacacgcg
     8401 aacattgcga catgctggtg tccataccca tgttcggcac ggtcgaaagc atgaacgtct
     8461 ccgtgtctgc cggaatggta ttaagcgaaa cccgccggca gcgcgtatta aaaaacgaaa
     8521 aagcgtaagc ctcaaaaaca atgccgtctg aaacagggat tctgtttcag acggcattcg
     8581 ttttcaaaat cagtgttcca agtggtcggt atcaaacttg accgccgcct cggttttatc
     8641 ttcgggcaag accaaattca gcaagactgc cgtaatgccg ccggcggaaa tagagttttg
     8701 gaacaagaca ggcaggtttt taaacacttc cggctcaaac gccacgccca agcccaagcc
     8761 gaccgaagtc gccgcaatca ccgcctcgcg cctgcggatg ccgtggctga ccaaaatccg
     8821 cacacccgca atcgcaatca agccgaacat caaaaccatc gcgccgccta aaaccggact
     8881 cggaatcgtc gtaaacgcgc gtccgacaac gggggaacag acccaacagc accaaaatca
     8941 cggcaatata tttgcccaca tggcgcgaag ccacgccggt catctgaatc acgccgttgt
     9001 tttgcgcaaa cgttgtcagc ggcagcgaac ccaaagccgt cgcaatcacc gacaccaagc
     9061 cgtctgccaa cacgccgccg cgcaggcgtt tggtgtattc ctcgccttca atcggctgat
     9121 cggacaccat tgccgttgcg gtcaaatcgc cgaccgcctc aaacacgctc aacaggaaaa
     9181 tcgcacccgc cacaataaat gcgtgccagt caaaagcaaa accatattta aacggtacgg
     9241 gcagcgtaac cagcggcagg ttttgcagtg ccgaaaaatc caccttgccc aaaaacagcg
     9301 cgacgatata gccggcaatc agaccgaccg caatgccgct catccgcagc agcgggtttt
     9361 tcatgcagtt gaacaccagc acaatcagca gcaccagcga tgccagcccc aagttttcca
     9421 tcgagccgaa cgtgccgtcc gcctttgcgc cgaagccgcc gccgaaatcg gtaataccga
     9481 cgtgtaccaa actcaagccg atcagcatca ccaccacacc gctgaccgtc ggcgtaatca
     9541 cttttttcaa atacggcaga agccacgccg agaaacacac caaaaacgcg ccgacaaacg
     9601 atacgcccaa gagcgtcgaa atcatcgcat ccttagtcaa accgccctct ttcatccccg
     9661 cgcccagcgc aatcatgacg gtaacgaacg agaaattcac cgactggata gacagcatcc
     9721 ccgaaccgac cggcccgaag cggttgacct gcaaataagt gccgacaccc gacgcaacca
     9781 tcgccatcga cacgagatac gccgtcatct ccaccggcag ttccagcgcg ccgcccacaa
     9841 tcagcgcggg cgtaatcatc ggcacgaaaa tcgccaaaag atgggtaacc gcgctcaaca
     9901 gcgcattacc gaacggcggc ctatcctcca aaccgtacac caaatcaggc gcatccgccc
     9961 cttttcccat atgaccgctc ataatgtttc cttgcttcaa atattgaaaa aaccaaagcg
    10021 cggattgtag cgaatccgcc ataccgcttc aatttcgatt tcggacggca tacgcgcccg
    10081 tccggcaaac agattccgaa ccgtcgccgc cggaatatcg tttgcaaaac gcaataacct
    10141 gatttcaaac acaaaaatac aaacccgacg catccgccgc caagccgccc cgtgcatacc
    10201 ggacccgccg gatttcacac ctgcggtaaa gtaggctaca atcggaagca ttaccgcccc
    10261 ctacaccaca actgataaaa ggttctgtat gttacaaggt agcctggttg ccctgattac
    10321 cccgatgaat caagacggca gcatccatta cgaacaactc cgcgacttaa tcgactggca
    10381 cattgaaaac ggcacggacg gcatcgtcgc cgtcggcacg acaggcgaat ccgccaccct
    10441 ctccgtcgaa gaacacaccg ccgttatcga agccgtcgtc aaacacgttg ccaaacgcgt
    10501 ccccgtcatc gccggcacag gggcgaacaa caccgtcgaa gccatcgccc tttcccaagc
    10561 cgccgaaaaa gccggcgcgg actacacctt atccgtcgtc ccctattaca ataagccctc
    10621 ccaagaaggc atttaccgcc atttcaaagc cgttgccgaa gccgccgcga ttccgatgat
    10681 tatctacaac gtgcccggcc gtaccgtcgt cagcatgact aacgacacta tcctgcgcct
    10741 tgccgaaatc cccaacatcg tcggcgtgaa agaagccagc ggcaacatcg gcagcaacat
    10801 cgaactcatc aaccgcgcgc ccgaaggctt cgtcgtcctg tccggcgacg accacaccgc
    10861 cctaccgttc atgctctgcg gcggacacgg cgttattacc gtagccgcca acgccgcgcc
    10921 caagctcttt gccgatatgt gccgcgccgc gcttcaaggc gatatcgccc ttgcacgcga
    10981 actcaacgac cggctgattc cgatttacga caccatgttc tgcgaaccca gccccgccgc
    11041 accgaaatgg gcggtatccg ccctgggcag atgcgaaccg cacgtccgcc tgccgctcgt
    11101 tccgctgacg gaaggcggac aggcaaaagt ccgcgccgcc ctgaaagcct caggacaact
    11161 ctaaatataa ctatgccgtc tgaaccgttc ggacggcata acgcaacaaa cactttaata
    11221 tccatcacac aggatgacac gatgacccat atcaaacccg tcattgccgc gctcgcactc
    11281 atcgggcttg ccgcctgctc cggcagcaaa accgaacagc ccaagctcga ctaccaaagc
    11341 cggtcgcacc gcctgatcaa acttgaagtc ccacccgatt tgaacaaccc cgaccaaggc
    11401 agcctctacc gcctgcctgc cggttcgggc gccgtccgcg ccagcgattt ggaaaaacgc
    11461 cgcacacccg ccgtccaaca gcctgccgat gccgaagtat tgaaaagcgt caaaggtgtc
    11521 cgcctcgagc gcgacggcag ccaacgttgg cttgtcgttg acggcaaatc ccctgccgaa
    11581 atctggccgc ttctgaaagc cttttggcag gaaaacggct tcgacatcaa atccgaagaa
    11641 cccgccatcg gacaaatgga aaccgagtgg gcggaaaacc gtgccaaaat cccccaagac
    11701 agcttgcgcc gcctattcga cacagtcggt ttgggcggca tctactccac cggcgagcgc
    11761 gacaaattca tcgtccgtat cgaacagggc aaaaacggcg tttccgacat cttcttcgcc
    11821 cacaaagcca tgaaagaagt gtacggcggc aaagacaaag acacgaccgt atggcagccc
    11881 tccccgtccg atcccaacct cgaagccgct ttcctgacgc gctttatgca atatttgggc
    11941 gttgacggac agcaggcgga aaacgcatcg gcaaaaaacc cgaccctgcc cgccgccaac
    12001 gaaatggcgc gtatcgaagg caaaagcctg attgtctttg gcgactacgg cagaaactgg
    12061 cggcgcaccg cgctcgccct cgaccgcatc gggctgaccg tcgtcggtca aaacaccgaa
    12121 cgccacgctt tcctggttca aaaagccccg aacgaaagca atgcagttac cgaacaaaaa
    12181 cccggcctgt tcaaacgcct gctgggcaaa ggcaaagcgg agaaacctgc cgaacagccg
    12241 gaactgattg tctatgccga gcctgtcgcc aacggctcgc gcatcgtcct gctcaacaaa
    12301 gacggcagcg catatgccgg caaagacgca tccgcattat tgggcaaact ccattccgaa
    12361 ctgcgttaaa ccattcaaaa caaaagcagc ttccaaacag aagctgcttt tttatgcgga
    12421 actttttaca acaaatgggg caaaatatcc tcaactgcct gaaccaacgc atccaccaaa
    12481 ggcggatcga acgcacgatg ccctgcctga accaccctca attccgcttc gggaaaggct
    12541 ttcgacagcg cccacgcact ctgcatcggc gtacacaaat cataccgccc ctgcacgata
    12601 atggtcggga tatgctgtat tttgccgata ttgttcaaaa tcgccctatc gccctgcaac
    12661 cagccgccgt tgacaaaata atggttttcc aaacgcgcga ttgccagcga ggcataagca
    12721 tcttcatcca cttcctccgg ctcgaaacag atcagatagc tttcccaatc cgcccaatcc
    12781 ttcgcggcag acaggcacac ttcttcatct tgatgaaaca gcaacccgtg atacgcctca
    12841 atcagccggt tccgccgatt ttcagcaatc ggcgcgacaa atttttgcca ttgttccgga
    12901 taaatccggc tcacaccgcc cgcctcgttc agccacgccg tttcagacgg cctgcacaaa
    12961 aatatcccgc gcaacaccaa tccctttacc cgttccggat gggtttgggc ataagccagc
    13021 gacaaagtgc tgccccacga accgccgaac accagccatt tcccgatacc cagcatttca
    13081 cggacttttt caatatccgc caccaaatcc caagtcgtat tgtcttccgc acaagcatac
    13141 gggcgcgaac gtccgcaacc gcgctggtcg atgatgacga tgcggaacac atcgggatta
    13201 aaaaaacccc gacattcagg cgaagccccc gcgcccggcc cgccatgtaa aaaaataacc
    13261 ggcacaccgt cgggattgcc cgattcctcc caataaattt gatgaatttc agacacctgc
    13321 aagtatccgc tatgaaaagg ctgttttatc tcatacatca tcttctccca tattgcttct
    13381 gataatccga acattcccac acgcaacatc acgcacgaga cacaagccgc cccgaaaggc
    13441 aaatgccgaa aaatcgcgat atagtgaatt aacaaaaatc aggacaaggc ggcgaagcct
    13501 cagacagtac agatagtacg gaaccgattc acttggtgct tcagcacctt agagaatcgt
    13561 tctctttgag ctaaagcgag gcaacgccgt actggttttt gttcatccac tataacagca
    13621 accctgtcgc cgtcattccc gcaaaagcgg gaatccagtc cgttca
//
LOCUS       DAWKOX010000039        13452 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.039, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000039 DAWKOX010000000
VERSION     DAWKOX010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13452
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.039"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(110..538)
                     /locus_tag="WJK78_000817"
     CDS             complement(110..538)
                     /locus_tag="WJK78_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ7597764.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(603..2351)
                     /locus_tag="WJK78_000818"
     CDS             complement(603..2351)
                     /locus_tag="WJK78_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ7597765.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDTYTTLLGLFSHEYFHAWNV
                     KSIKPAAFVPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNTDHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2678..4111
                     /gene="ccoN"
                     /locus_tag="WJK78_000819"
     CDS             2678..4111
                     /gene="ccoN"
                     /locus_tag="WJK78_000819"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ7597766.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4138..4749
                     /gene="ccoO"
                     /locus_tag="WJK78_000820"
     CDS             4138..4749
                     /gene="ccoO"
                     /locus_tag="WJK78_000820"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ7597767.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4754..4924
                     /locus_tag="WJK78_000821"
     CDS             4754..4924
                     /locus_tag="WJK78_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ7597768.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4948..6045
                     /gene="ccoP"
                     /locus_tag="WJK78_000822"
     CDS             4948..6045
                     /gene="ccoP"
                     /locus_tag="WJK78_000822"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ7597769.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPTPAPAAEPAASAPA
                     EAAQAASEAKPAAAEPKAEEKAAPAAKADGK"
     gene            6085..6279
                     /locus_tag="WJK78_000823"
     CDS             6085..6279
                     /locus_tag="WJK78_000823"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ7597770.1"
                     /translation="MPGIPHVGIKADWADRIKKGKDTLHKHAIEGFNTMPAKGGRGDL
                     SDDEVKAAVDYMVNQSGGKF"
     gene            6481..7890
                     /locus_tag="WJK78_000824"
     CDS             6481..7890
                     /locus_tag="WJK78_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ7597771.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYTMDEIHSDMMLGAAGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPSKGRARSWWRNLHGTFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWILELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVVFCLAV
                     IFIGISGCVMWWKRRPSGAAGMVPPAQKIKLPVWWMMALPLLAIALIFPTALLAIAVI
                     WLLDTLLLSRIPVLRKWFK"
     gene            7991..11236
                     /gene="recC"
                     /locus_tag="WJK78_000825"
     CDS             7991..11236
                     /gene="recC"
                     /locus_tag="WJK78_000825"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ7597772.1"
                     /translation="MFYLYQSNRLETLAALFAHIQKVKPLKSALQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLAFSLPASLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPFFYTLECLSDLLESRFEVDKVLALLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVHWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAAFIESLSDIVRIWRQPATVGEWVARCRDLLETLFQAEADDQKSVQNLE
                     NEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNLIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAETYIEARREGRDFAQTAARIGAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAEMRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLATAEAFAQKQDWEAALKKAQTAYHGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLVRLLADTLAAAEKRKRPEQPDGMERQMPSESV"
     gene            complement(11267..12835)
                     /gene="mtrF"
                     /locus_tag="WJK78_000826"
     CDS             complement(11267..12835)
                     /gene="mtrF"
                     /locus_tag="WJK78_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ7597773.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTLYPAP"
     gene            13169..13381
                     /locus_tag="WJK78_000827"
     CDS             13169..13381
                     /locus_tag="WJK78_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597774.1"
                     /translation="MKNEIQKIMDKYNPWHEDDFESYEDIAKDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENIHAMIGEIKNAI"
BASE COUNT         3389 a         3242 c         3555 g         3266 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgtggtt taaacgtttc ggcttgtaat cagacgcggg
      121 cgttgtccag ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga
      181 tgatttcgtc aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc
      241 gcgtaccggt ccggcaatag gcaaggacgg gatattcggc ttgtccgatg agttggcgga
      301 aggtttcgac atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag
      361 taacgcctgc ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt
      421 cgcggtcggg gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat
      481 cggctttggt cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt
      541 tgtttccttt actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa
      601 gtttaaccga acaaccagtt gtccaacagg ttccggtctg tgatatgtag gatggcagta
      661 tccgctgccg ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag
      721 tggatattga tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag
      781 gcataaccgt ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg
      841 ccgccgttga agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca
      901 aaatcgcctg ccgacgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg
      961 ggaagcggca ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa
     1021 tcttcggtac tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc
     1081 tgacagcgga tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga
     1141 tagagtttgt ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc
     1201 agatcaaggc acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg
     1261 ctgttttcat ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc
     1321 tgcctcaaac ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa
     1381 taagattcgg gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta
     1441 ataccttcga atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataagggacg
     1501 aacgcggcag gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt
     1561 ccgagcaatg tggtgtaggt atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg
     1621 cggtcggcga gcagggcggt gctgtcggtg tgttccaaac cgccgtaaat atggtcgccg
     1681 acgtggagca ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct
     1741 gtttcgcaga tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg
     1801 ccgcttaagg caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag
     1861 cccatctcga caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc
     1921 cctgtttccg gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag
     1981 cggtgcggca gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa
     2041 ccgcgttctg tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag
     2101 cggatttgcc actcgccgcg tacggcggcg gcatgccagc ggtttttggc aatttgttcg
     2161 agcggcatgg acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc
     2221 cgaatcagat agctgcccgg aacccagttt ggcaggctta tttctatagg aagatcatca
     2281 tcttgtgtga atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta
     2341 taatgaatca taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg
     2401 cagcttaacc tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg
     2461 cggtcgggtt gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc
     2521 aaagggctcg tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa
     2581 atttagaaaa aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga
     2641 taaaaatctt tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta
     2701 caaagtggtg cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt
     2761 cggcgttatc gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc
     2821 ttggttccac ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg
     2881 cggttgcggc ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct
     2941 tttcggcggt tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc
     3001 cgtcgtcagc ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc
     3061 gatcgatatt ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat
     3121 tgccaaacgt aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt
     3181 ggcggtcgca cttttacaca tcgtcaacaa tatcagcatc ccggccggtt tgatgaagtc
     3241 ataccccgtc tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataatgc
     3301 cgtgggcttc ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca
     3361 agcagcccgc cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt
     3421 cacctatatg tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca
     3481 atctttgggt atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa
     3541 cggcatcatg accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt
     3601 cctgattgta tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat
     3661 taaaacggtc aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg
     3721 tgcgttgggc tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct
     3781 gttcggcaaa gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac
     3841 catcggcgtg gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat
     3901 gtggagttct ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg
     3961 caccatgcct tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg
     4021 cattatggcg tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat
     4081 ccctgcggtt tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg
     4141 aaattacaac aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta
     4201 gtcagtgtcg gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag
     4261 ccggcaccgg gcgtgaagcc ttacaatgcc ttgcaggttg ccggacgcga tatttacatc
     4321 cgtgagggct gttacaactg ccactctcaa atgattcgtc cgttccgtgc ggaaaccgag
     4381 cgttacggtc attactctgt tgccggagag tcggtttacg accatccttt ccaatggggt
     4441 tccaaacgta ccggtcctga tttggcacgt gtaggcggcc gctattccga cgaatggcac
     4501 cgtatccacc tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattccca
     4561 tggcttgcac gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt
     4621 aaagtaggta ctccttacag tgatgaggaa attgcgaaag cgcctgaggc tttggcaaac
     4681 aaatccgagc tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac
     4741 gtaaggtaac atcatggata ttaacggtat tcgcgctctt ttcacggtat ggatctttat
     4801 ctgtttcctg ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa
     4861 tgccgcaaac agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg
     4921 ttaatattgt gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc
     4981 tggaatatat atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg
     5041 ctgtctcaaa atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat
     5101 gagtgggacg gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt
     5161 gttttgacgt ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac
     5221 aaaggtctgc tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat
     5281 gagcaatacg gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa
     5341 gaccctcaag ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac
     5401 ggctctgatg ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg
     5461 ggcggtgatc ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct
     5521 gcctggggtc ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc
     5581 ctttcaaaac ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc
     5641 agcggtccgc ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt
     5701 ttgggtccga acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc
     5761 gaaaccatta ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa
     5821 gacaaactgc atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct
     5881 ccggtgaaaa aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct
     5941 gctcctgcag aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa
     6001 gccgaggaaa aagctgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt
     6061 tgtgccgcct gccatggcaa tgcgattccg ggtattcccc atgtaggcat caaagccgat
     6121 tgggccgacc gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc
     6181 aatacgatgc ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg
     6241 gttgactata tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt
     6301 atcggttatg aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc
     6361 ggttttaaac gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt
     6421 agtctttatt gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta
     6481 atggatacac aaatcaaaac tgaagccgac aatcagagca accggcgtta tctgaccgtt
     6541 tggcggtggc atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt
     6601 acgggtttgg gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat
     6661 gttgtgccgc aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc
     6721 gttaatccgg aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt
     6781 gccgtgttcc gtgtcaacaa tgagggcaag gcaacgatgg tcgcggtcga tccttatacg
     6841 gcaaaagtgg tcagtaccat gccgcgcaat cagggttggt attacacgat ggatgaaatc
     6901 cacagcgata tgatgctcgg tgcggcaggc gattatcttt tggaaacggc agcatcgctg
     6961 acgattatca tgataatcag cggcttgtac ctttggtggg tgaaacggcg cggcatcaag
     7021 gcgatgctgc tgccgtcaaa aggcagggcg cgttcttggt ggcggaatct gcacggcacg
     7081 tttggaactt gggtgtcgtt gattttgctg ttgttctgcc tgtcgggtat tgcttgggcg
     7141 ggtatttggg gcggcaagtt cgtacaggct tggagtcagt tccctgccgg taaatggggt
     7201 gtcgaaccga accccgtttc agtcgtgccg acccacggcg aggtattgaa tgacggcaag
     7261 gttaaggaag tgccgtggat tttggagctt acgcctatgc ctgtttcagg gacgactgtg
     7321 ggcaaagacg gcattaaccc cgacgagccg atgacattgg aaaccgtcga ccgttttgcg
     7381 cgggaaatcg gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta
     7441 tggactttgt cgcaagactc tatgagttac gatatgatta gtccgtttgc cgaccgcacg
     7501 gtgcatatcg accagtacag cggcaagatt cttgccgaca tccgttttga tgattacaac
     7561 ccgttcggca aatttatggc ggcgagcatt gcgctgcata tggggacttt gggctggtgg
     7621 agcgtgttgg cgaacgtcgt gttctgcctt gccgtcattt ttatcggtat cagcggctgc
     7681 gtgatgtggt ggaaacgccg tccgtccgga gcggcgggca tggttccgcc ggcacaaaaa
     7741 atcaagctgc cggtttggtg gatgatggca ttgccgctat tggcaatcgc attgatcttc
     7801 ccaaccgcac tgcttgccat tgccgtgatt tggctgctgg ataccttgct gctgtcgcgg
     7861 attcctgttt tgaggaaatg gtttaaatga ccaaatgccg tctgaaaggt tcagacggca
     7921 ttttgtttga aggcaggcgg gggaaaggct atataatccc gaatactttt ccgcaacttt
     7981 tgtcgaaatc atgttttatc tgtatcaatc caaccgtctt gaaacgctgg cggcactgtt
     8041 tgcccacatt caaaaagtca aaccgctgaa atcggcttta cagcccgaac agattattgt
     8101 gcagagtcag gggatgcgcc gctacctcaa cacctgcctc gcccgcgatt tgggcgtggc
     8161 ggcgaatttg gcgttcagcc tgcccgccag cctgacgtgg aagctgatga aaaaactgat
     8221 tcccggcatt ccggaactca gcccgtttgc acccgaagtc atgcgctggc ggctgctgga
     8281 tttgttccgc agcgaagcat tccggaatac ggcagaattt gaagatgtga ggaatgtgct
     8341 gcaagactat ctaggcagcg gcgaatcggc agattaccag cttgcgggac agcttgcgga
     8401 catattcgac caataccttg tctatcgtcc gcagtggata gacgcgtggc agcagggcag
     8461 gatactcggt ttgggcgacg atgagatctg gcagtccaaa ctgtggcgtt acctcgacga
     8521 cggcaggcag agcgcgccgc accgtgtcgc gttgtgggaa aaactgcttg ccgcgttgga
     8581 caaggataag ctgcccgagc gttatttcgt gttcggcatt tccacgatgg cgccgatgta
     8641 tcttcagctt ttgcacaagc tgtccgaaca ttgcgatgtg ttcgtgttcg cactcaatcc
     8701 gagcgggatg tattggggca acgtcatcga agcggcgcaa atcctcaaag gcggcggcga
     8761 tcccgattta actcaggcag ggcatccgct gctcgcctca ttgggcaagc aggggcgcga
     8821 ctttttcgac tttttgaacg aaatggaaat agaaggcgaa acgccggtat ttgaagaagg
     8881 cggacgcgat acgcttttgc acgccctgca aaccgatatt caaaacctga aaatgccgtc
     8941 tgaaaatgtg ggaagcgtca acacgggcga cggctcgata cgcatcgtct ccgcacacag
     9001 ccccttgcgc gaattgcaga tactcaaaga caagctgttg aaaattctgc atgaacatcc
     9061 cgattggcag ccgcatgata tcgccgtatt aaccccgaac atcgaatcct atacgccttt
     9121 tatcgaagcc gtgttcggac aggcgcagcc cggtgcgcag gcattgccgt attccgtttc
     9181 agacgtgaaa atcagccgcc gacaaccgtt tttttataca ttggaatgcc tgtccgactt
     9241 gttggaaagc cgatttgaag tcgataaagt gctcgcgctt ttggaaaccg cgcccgtatt
     9301 gcgccgtttc ggactgactg aggacgattt gccgcttttg cacgatatgg ttgccgattt
     9361 gaacgttcac tggggtttgg acggagaaat gcgcggcggc acggatcagc tgttcacctg
     9421 gaagcaggcg gtagaacgca tgatattggg ctggatgctg cccgaaggcg gcaacccgat
     9481 gtggcaggat gtcagcgcgt ggtatgccga cgtgaaccaa accgccctgt tcggacgttt
     9541 tgccgccttt atcgagtccc tgtcggatat tgtacggata tggcggcagc ccgcaacggt
     9601 cggcgaatgg gtggcgcgtt gccgggattt gcttgaaaca ttgttccaag ctgaagccga
     9661 tgaccaaaag tcagtccaaa accttgaaaa cgaatgggtc aaatggcagg cggaaacaga
     9721 attggcgcaa ttttccggac agttgccgcc gcacaccgtc atccgccata tccgacgctt
     9781 tctcgacagc gaaagcgagg caggcttttt acgcggcggc atcacctttt gcagtatggt
     9841 gccgatgcgg agcctgccgt tcaaagtcat ctgcctgttg ggtttgaacg acggagattt
     9901 tccccgtaat accaaagccg ccgtattcga cctgattgcc aaacatcccg ccaaaggcga
     9961 ccgcgcccgc cgcgatgacg accgctacct gttcctcgaa gccctcatca gcgcgcgtga
    10021 aatcctctac ctgtcctaca tcgggcgcga catccgcaaa gacgaagaac tggctccgtc
    10081 ttctttgttg ggcgaactca tcgacacagt tgccgccatg accggcacaa acagccgcca
    10141 acttgcacaa aacctgatag aacagcatcc gctgcaagcc ttctcgcgcc gatattttca
    10201 agaaggcgga cgttcagacg gcatattcgg cacgcgtacc gactacgccg ccgcgctcgg
    10261 acaaacgccc gaaccgccgc aacccttttt cgatcaaccc gtagaaaacg ccgaacctgt
    10321 tgccgaaatc ggacaggacg aatttatccg cttctggcgc aaccctgtca aagtatggct
    10381 tcagcagcag cttgcgtgga gcgaacccca tatcggcgaa gcctgggagc ctgccgaacc
    10441 cttcgagccg caacacgccg atcaaatcgc cgaaacctac atcgaagcac ggcgcgaagg
    10501 acgggatttt gcccaaaccg ccgcccgcat cggggcggaa agcctcctgc cgtcgggaga
    10561 gttgggcaga ctttggcagc aggacttcca aactgctgcc aaacaaatcg acacggcggt
    10621 tttaaacagc cccaaactgc caccgctttc atatgccata ccgtcggacg ggcaaatcct
    10681 gaaaggcagc ttgggcaatc tgtaccgctg cggacaagtg ttttacgcct acggcaaacc
    10741 caacgcgccg caacgtatcg cttttctgct ggaacacctg atattttgcg ccgttatgcc
    10801 gtctgaagcc gaaatgcggc aaacctttat cgtccaatcc ggagaaaccg aaatattggc
    10861 ggaaatcgcg caagacaggg cattgcagct attgtcggaa tggatggcgt ttttcaatat
    10921 cgggcaaaac cgcccgctgc cgttttttgc caaaacctcg cttgccaccg ccgaagcgtt
    10981 tgcccaaaaa caagattggg aagccgccct gaaaaaagcc caaaccgcct accacggcag
    11041 caaagtcagc aaagggcaga aagactatac cgaagtcgcc ctcgtgttcg gcaacgcaag
    11101 ccaaaacccg ctcgaacagc ccctgtttga aaacctcgtc cgtctgcttg ccgacacgct
    11161 tgccgcagcg gaaaaaagga agaggccgga gcagcctgac gggatggaaa ggcaaatgcc
    11221 gtctgaaagc gtttaagcat ttcagacggc attttgttta tcgtgtttaa ggtgcgggat
    11281 acaaagtggg tgcgccggga ccgacgggca ggcccaaaac aaatacccaa atgcagaata
    11341 aggcaatcca tgcaattaag aagaaagcgg aatacggcaa catcatagaa atcagcgtac
    11401 ccacgcccgc atcttttttg tatttgatca ccgtcgccat aatcagcccg aaataactca
    11461 tcatcggcgt aataatattg gtaacggaat caccgatgcg gtaagcggct tgaatgactt
    11521 cgggcgcgta gccggccaac atcagcatag ggacgaaaat tggcgcagtt accgcccatt
    11581 gcgcggaggc ggagcctatc atcagattga taaaagcaca aattaaaata aaaccgataa
    11641 acaacacgct gccgcccaag ccgacttctt ttaagaacgt cgccccttta acggcaatat
    11701 attgcccaat attcgtccaa ttaaaaaatg cgacaaactg tgcggcaaaa aagatgatga
    11761 ccaaataaag ccccagagta ctcatcgatt cggccatcgc attaacgact tcctgttcgc
    11821 cgcgcaaact tcgggttacc cggccataaa caatgcccgg cagcgcaaac aacaagaaaa
    11881 taaaaacaac aatcgatttt aaaaacggcg aaccggaaac caatcctgtt tcaggatgac
    11941 gcaaaatacc gtcggcaggg acgatgctcc aagccaatag ggcggataag gcaacaaaca
    12001 ccacgccagc ccaaattaat cctttatatt ccaaaggcgt gatttcattg gaatgccgaa
    12061 tgtctttttc ttcttgtgac aaatctgatt gataagggcc caattgcggt tcgacgattt
    12121 tttcagtaac aaaataacca atcaaagcaa tcacaaacgt actggctacc ataaaaaacc
    12181 agttggcttc agggcctacg acgtagtcgg gatggatgat ttgcgccgcc tgttgggtga
    12241 tgcctgccaa gagcggatcg attgtgccta agaacagatt ggccgaataa ccgcccgaaa
    12301 cgccggcgaa agccgcagcc agaccggcaa gcggatggcg gccgagggaa tgaaagatga
    12361 tggcggacaa agggattagg acgacatagc ccaattcaga agcggtatta gataaaatcc
    12421 ctgtaaaaac aaccataaaa gtagtgagtt tgcgtggaga ttttgtgagc aataagcgca
    12481 ttaatgcgga aatcaagccc gatttttccg caatccccac gcccaataaa gaaaccaaca
    12541 ccgttcccaa cggcgcgaaa ccggtgaaat ttttaacggt atgcgtcagg attttgatca
    12601 aaccgtcagc atcgagcagg ctgacaacgt gaatcaaacc gtcatcggca cgtcctttcg
    12661 caccaacagg gcgcggatcg gggacggata gtccgaaata cgcaccggcg gcagaggcaa
    12721 tcagcaataa cacaatgaaa ataataaaaa gcgtaaccgg gtgcggcaac atattgccca
    12781 gccattcgac tgtgcgtaaa aatcgtccgt cccgttgcgt atcggtttga ctcatctgct
    12841 tctccttaaa aaaaatatat tgagtgcatt aaatttttga atgtaacatg aagtgttttg
    12901 taagcaaact aaaataatcg tatatgtata taaccgtaat agattaaaac agaaaatgcc
    12961 cacatcgtta ttttcataaa ggcggtaatc cgaaaacttg acgttaaagc cttatcagga
    13021 atgactggaa ctcaaaaaaa cggattcccg cctgcgcggg aatgacggga ttttcggttt
    13081 ttgtttgcaa gaatgccgga gaagaatgca gtttacattt tgaatgatat tgttattaat
    13141 tgtaaataaa tattggaagg taaatgatat gaaaaatgaa attcaaaaaa tcatggacaa
    13201 atataatcca tggcatgaag atgattttga gtcgtatgaa gacattgcca aagatgtatc
    13261 gctgatgaca gataaaacgt tcattgaaca ttatttgtta gaagtttatt cagaagaaaa
    13321 cggacatttt gaccaagaga atatccatgc gatgataggg gaaattaaaa atgcaattta
    13381 gtgaatatga gacctttgca aaaatagtct gttaacgaaa tttgacgcat aaaaatgcgc
    13441 caaaaaattt tc
//
LOCUS       DAWKOX010000040        13295 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.040, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000040 DAWKOX010000000
VERSION     DAWKOX010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13295
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.040"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(37..762)
                     /locus_tag="WJK78_000828"
     CDS             complement(37..762)
                     /locus_tag="WJK78_000828"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEZ7597775.1"
                     /translation="MRIPLLAPDNYAFPDPTYALARCDGLVGVSGDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDESGETRLAGGFYGVQIGSV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(832..1266)
                     /gene="fur"
                     /locus_tag="WJK78_000829"
     CDS             complement(832..1266)
                     /gene="fur"
                     /locus_tag="WJK78_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ7597776.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHSEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            1485..1862
                     /locus_tag="WJK78_000830"
     CDS             1485..1862
                     /locus_tag="WJK78_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ7597777.1"
                     /translation="MNKTLILALSALLGLAACSAERASLFPSYKLKVIQGNEIDPRAA
                     AALRLGMTKDQVLLLLGSPLLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDALQNAAEALKDRQNTDKP"
     gene            1872..2681
                     /gene="dapB"
                     /locus_tag="WJK78_000831"
     CDS             1872..2681
                     /gene="dapB"
                     /locus_tag="WJK78_000831"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ7597778.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2678..2923)
                     /locus_tag="WJK78_000832"
     CDS             complement(2678..2923)
                     /locus_tag="WJK78_000832"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597779.1"
                     /translation="MPRRQLYRISFSVETPLLGHLSFGAVESDFIWEGRNPLQIRTTH
                     RATLYVSSRVLKHMPIRSLSAKCRLNNIFSDGILYGG"
     gene            complement(2941..3351)
                     /locus_tag="WJK78_000833"
     CDS             complement(2941..3351)
                     /locus_tag="WJK78_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597780.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVNCVDYPDLP
                     QEIPMPNYSDWVKIKFKQFSYLKFVYGYATKNRDKDIDNTLELGELKQDDEILDYGGA
                     LEVIGGRYDFPTAFRIDIVCREIELEFLDQEGFN"
     gene            3574..3963
                     /locus_tag="WJK78_000834"
     CDS             3574..3963
                     /locus_tag="WJK78_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ7597781.1"
                     /translation="MNVKIKYNLLEYCEYLGGIFGVYKNYLNMDIKDPNLKIRFFDFL
                     EELLSDGVIELCDYRENPPKILTGSPKTQVDELRRIWPDMEEMLLYFPDNPWFYVEHF
                     WWGATCPIELTQLPKIEIYEEQMKQGK"
     gene            complement(4000..4158)
                     /locus_tag="WJK78_000835"
     CDS             complement(4000..4158)
                     /locus_tag="WJK78_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597782.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNETELARMGLRL
                     KYNGQLTD"
     gene            complement(4166..5320)
                     /gene="lpxB"
                     /locus_tag="WJK78_000836"
     CDS             complement(4166..5320)
                     /gene="lpxB"
                     /locus_tag="WJK78_000836"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ7597783.1"
                     /translation="MVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARFVGIGGE
                     LMKAEGFESLYDQERLAVRGFAEVVKRLPEILRIRRGLVRDLLSLKPDVFVGIDAPDF
                     NLGVAERLKRAGIPTLHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLYLDAGGR
                     AEFVGHPMAQLMPLEDDRETARKTLGVDAGIPVFALLPGSRVSEIDYMAPVFFQTALL
                     LLERYPAARFLLPAATAATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAADAVLVTS
                     GTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPELLQSEAK
                     PEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(5386..6378)
                     /locus_tag="WJK78_000837"
     CDS             complement(5386..6378)
                     /locus_tag="WJK78_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ7597784.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEARYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVRLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            6873..9629
                     /locus_tag="WJK78_000838"
     CDS             6873..9629
                     /locus_tag="WJK78_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ7597785.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRMVQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRNE
                     RGQTALETAAVAETAVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPLI
                     ATPVQTASSAVSNGDALVYDAAEKIRRAAAILPEGATPKASAQEMPSETATFTAAAEQ
                     ARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEAATVPAEEMIQVE
                     TRQG"
     gene            complement(10503..11495)
                     /gene="pdxA"
                     /locus_tag="WJK78_000839"
     CDS             complement(10503..11495)
                     /gene="pdxA"
                     /locus_tag="WJK78_000839"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ7597786.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAPGEGELEVLHIPTAEAVAAGRLNPANAAYVLQLLDTA
                     LAGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLR
                     VALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGESGH
                     LGHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKY
                     HSFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            11655..13082
                     /locus_tag="WJK78_000840"
     CDS             11655..13082
                     /locus_tag="WJK78_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ7597787.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
BASE COUNT         3263 a         3995 c         3227 g         2810 t
ORIGIN      
        1 caccatattt gaacctgacc gaagcataag ccgccatcaa agccccttgc acgccacttc
       61 gcgccgcccg atttcctctt tcaacggcac ggcgttcaac atccgcagac gttcggcaaa
      121 atccgcaaac ggcagcagct ccgaaccgaa acggcgcata tgttccgtgt cctgctggca
      181 gtctatcagt tccacaccca aatccgccaa aaacggcacg gcgcaggcaa acgcgatttt
      241 cgacgcatcc ggttgcaacg caaacatcga ttcgccataa aacacgctgc cgatctgcac
      301 gccgtaaaag ccgcccgcca acctcgtttc accgctttca tcgggataat ggcactcgaa
      361 agaatgcgcg tgtcccattt cgtgcagctt caaatatgcc gtctgaaact cgggcgcaat
      421 ccaagttccg tcctgattcg ggcgcgccgc tgccgcacaa tgcgcgacca cttccgcaaa
      481 acagccgttg accgcaaccc gatagctgcc gttgcgcagc gttttcgcca gcgagcgcgg
      541 aacgtgcaga cgttcgggaa caatcaccgc acgcgggccg accgcatacc aaaaaaacca
      601 accgtcccga gaaaaccacg gaaacacgcc gttccgatac gcctcgagca gccgccccgc
      661 atccaaatcg ccgctcacgc cgaccagccc gtcgcaccgg gccaaagcat aggtaggatc
      721 gggaaaggca taattgtcag gggcaagcag cggaatacgc atggcagttc tccaaaaaca
      781 cagacggcat ccaaaatcat gaatgccgtc tgaacaacaa accgtccgga tttaacgttt
      841 gcccttggcc tgacagtcgc tgcacacgcc gtacatataa agcgcgtgat cgacgatgcg
      901 gtagccgttt tcctcagcga ttttgtcttg cagggcttcg atttcgggat tgtggaattc
      961 cgttacctcg ccgcacttca cgcagacgat gtggtcatgg tggtcgcctt tgtccaactc
     1021 ataaaccgcc ttgcccgttt caaaatgatg gcgttgcaga atacccgcct gctcaaactg
     1081 ggtcagcaca cggtaaatcg tcgccacacc gatttccaca ccctcttcca acaaaatgcg
     1141 gtacacatct tccgcactca aatgctcttc cgaatgcgtc tcgaacaaat ccaaaatctt
     1201 caaacgcggg ccggtaacct tcagaccgct gtctttcagt tgtgcaatat tgttgaattt
     1261 ttccataata ttcaataccc ctgtaaaaca atagacgtta taatacgcaa tttcggcctg
     1321 tttgcccact atcgcaccat agcagtttgc aatagtaaaa ccgcaccggc ggccgatgcg
     1381 cggacagggc ggataccgct taatcgtatg attatcgttc gcttttataa aatattcaag
     1441 cagtgttaca ctacccatcc cgatttgcac agaaaggcat ttccgtgaac aaaaccctca
     1501 tcctcgccct ttccgccctc cttggccttg ccgcgtgcag tgccgaacgc gcctcgctgt
     1561 tcccctcata caagctcaaa gtcatacagg gcaacgaaat cgacccccgc gccgccgccg
     1621 cactccgcct cggtatgacc aaagaccaag tcctgctcct gctcggcagc cccctgttgc
     1681 gcgacgcgtt ccacaccgac cgctgggact ataccttcaa cacctcccgc aacggcatca
     1741 tcaaagaacg cagcaatctg accgtctatt ttgaaaacgg cgtactcgtc cgcaccgaag
     1801 gcgacgccct gcaaaacgct gccgaagccc tcaaagaccg ccaaaacaca gacaaaccat
     1861 aaggaacaca catgacaccg ctcaaaatcg ccatcgccgg cgcaaacggc cgtatgggac
     1921 gcgtattggt tgaagccgtc aacaaccatc ccgacaccgt cctttccggc gcgctcgaac
     1981 actcaggctc agaagccctc ggactggacg caggctacgc cgtcggactc aaaaccggca
     2041 tcgccatttc agacgacgtt gacgccgttc tcgcacaaag cgacgtactc atcgacttca
     2101 cccgccccga gcccaccctc aaacacctgc aaaaatgcgt tgaaaaacaa gtcaacatca
     2161 tcatcggcac aacaggcttc gacgatgcgg gcaaagccgc tatccacact gccgccgaac
     2221 aaacaggcat cgttttcgcc gccaacttca gcgtcggcgt caacctcacc ttccacatcc
     2281 tcgacaccgt cgcacgcgta ttaaacgaag gctacgacat cgaaatcatt gaaggccacc
     2341 accgccacaa agtcgatgcc cccagcggca ccgcgttacg catgggcgaa gtcatcgccg
     2401 gcgcgctcgg cagagacctc aaacaatgcg ccgtttacgg ccgcgaaggc cacaccggtc
     2461 cgcgcgatcc gtcgaccatc ggctttgcca ccgtccgcgc aggcgacatc gtcggcgacc
     2521 acaccgccct cttcgccacc gacggcgagc gcgtggaaat cacccacaaa gccggcagcc
     2581 gcatgacctt tgccgccggc gccgtccgcg ccgcagtttg ggtaaacggc aaaacgggtt
     2641 tgtacgatat gcaggacgta ctcgggctga acaaccgtta acccccatac aaaatgccgt
     2701 ctgaaaagat attgttcaga cggcattttg ccgacaggct ccgtatcggc atatgtttca
     2761 acacacggga cgatacataa agcgtcgccc tatgtgtcgt cctgatttgc aagggattac
     2821 gcccctccca aataaagtct gattctaccg ccccgaagga cagatgtccg agtagcgggg
     2881 tttcaaccga aaaggaaata cgataaagtt gcctgcgcgg cataacaagc tacggctcgt
     2941 ttaattgaaa ccctcctgat ctaaaaattc taactctatt tcccggcaaa ctatatctat
     3001 cctaaaagca gtcggaaaat catacctacc gcctatcact tccagcgcac ctccataatc
     3061 caagatttca tcatcctgct ttaattcgcc aagttccaat gtattatcga tatctttatc
     3121 tcggtttttt gtggcgtatc catagacaaa tttcaaatag ctgaactgct tgaatttaat
     3181 ttttacccag tctgaataat taggcatagg gatttcttga ggtaaatccg gataatccac
     3241 acaattgacg atgatatgga attcatcgtt tttcaaagta tagtttaata gagtgccctc
     3301 atatatatac agaaattgat aatctttttt tggaatggta taagttgtca tattatttta
     3361 ccttttcaaa aacaatgagt ttaagatttt ttgagtccaa gttggttcta ctactcttat
     3421 gaaatttcag ttgtttaaac tcttccttta ttttaaggaa tttttcaact agccgagaac
     3481 aaactggagc aaaatggacg attgagttta ggaatcaacc tgattcagta catgggcaaa
     3541 gattagaatt aaaatttaga taaaggttac gttatgaatg tgaagataaa atataatctt
     3601 ttagaatatt gtgaatattt aggtggtatt tttggtgttt ataaaaatta tttaaatatg
     3661 gatatcaaag atccaaattt aaaaattaga ttttttgatt ttttggaaga acttttatca
     3721 gatggtgtta ttgaattatg cgattatcgt gaaaatcctc caaaaatatt aactggttcg
     3781 ccaaaaacac aggtagatga attaagaaga atttggccgg atatggaaga gatgttgcta
     3841 tattttccag ataatccttg gttttatgta gaacattttt ggtggggagc aacttgccct
     3901 attgaactga cacaattgcc taaaatagaa atttacgaag aacaaatgaa acaaggtaag
     3961 taagcgtatt agtataagct ataatcatat ataacaaaat taatcagtta actgaccatt
     4021 atattttaac cttaatccca ttcgggccag ttctgtttca tttggaattc ctcttaaata
     4081 cttattgttt gatgtgccat taatcacaat ttctccccct ttttttgtaa tacgtgctgc
     4141 ttcgggaaaa taatccatta accgctcaac atcccgcctc ttccaaaacc gcgcgcgcgg
     4201 ccaaatccgc cgtatctttt ttcaacagca ggtgcaacgc cctgaaatcc tgttgcagcg
     4261 cggcaacctt atcggggtgt tcgtaccagt ccgccaacgc cgccgccagt ttttccggtt
     4321 ttgcttcaga ttgcaataat tccggcacag cctccttacc caacaggata ttcggcaggc
     4381 cgacatgcgg cactttgatt ttgcgtttca cataagcata ggtcagcggc gaaatcttgt
     4441 agctgatgac catcggacgc ttacacaacg ccacctccaa agttgccgta ccgctcgtta
     4501 ccagcaccgc atccgccgcc ctgcacactg tttcagactg tctgtcgatt accgtcagcg
     4561 gcaatccggc aaactccggc cgctgcaaaa cttccgccaa acgccgcttc gtcgccgccg
     4621 ttgcggcagg cagcaggaag cgtgcggcgg gatagcgttc caacaacaat aatgccgtct
     4681 gaaaaaacac cggcgccata tagtcgattt cgctgacgcg gctgccgggc agcagggcga
     4741 atacggggat gccggcatcc acgcccaaag ttttccgcgc cgtttcacgg tcgtcttcca
     4801 agggcataag ctgcgccatc ggatgaccga caaactccgc acgtccgccc gcatcgagat
     4861 aaagctgcgg ctccatcggg aacaggcaca gcacgcggtt gacctgatgc acgattttgc
     4921 ccacgcgttc ccgccgccac gcccacaccg acggactgac ataatgcagg gtcggaatgc
     4981 ccgcccgttt gagccgctcc gccacaccca gattaaaatc gggcgcatcg atgccgacaa
     5041 acacatcagg tttcaacgac agcaaatccc gtaccagccc cctgcgtatc cgtaaaattt
     5101 ccggcaggcg ttttaccacc tcggcaaagc cgcgcaccgc cagtcgctcc tgatcataaa
     5161 ggctctcgaa accttccgcc ttcatcagtt cgccgccgat accgacaaaa cgcgcctgcg
     5221 ggcaacgctt tcggatggcg cgtatcaggt gcgcccccaa caggtcgccc gacgcttcgc
     5281 cgacactgac ggcaatcaaa gggctttttt tatcaaccat attcgttctt cttcacatac
     5341 tttcacgtcc cgatgccgtc tgaaggcttc agacggcatc ggggttcaca ttttcgtccc
     5401 gttttccaac atcaccgcaa actgcgccaa gtccggcggc agctccgcct tcaacaccag
     5461 cggctcgccc gtgagcggat ggttcaagtg cagctcggac gcgtgcaaaa acatccgctt
     5521 caaacccaac ttctgcaaac gacggttcgc ctgataatcg ccgtagcgtt cgtcgcccgc
     5581 aatcggacag ccttgagatt gcagatgcac gcggatttgg tgcgtgcgcc ccgttttcag
     5641 cgttgcccgc accaaagtca ggtgcgacag cccgacaccg tgcaaaatgc cgtctgaaaa
     5701 acggcttaac acacggaaca ccgtgtgcgc cgactgcccg tcctcgctga cgcgtaccat
     5761 cttttcgcct tgtgcgccgg tatatttgaa caggggcagc ctgacgtgga aattatcgtc
     5821 cggcagtttg cccaccccca gcgcaaggta gatttttttg gggtggtcgt tacggatggc
     5881 ttcgtgaagt ttgacgagcg cgctgcgttt cttcgccacc atcaacaaac cgctcgtatc
     5941 cttgtccaaa cggtggacga gttcgagata acgcgcctcc ggacgggcgc ggcgcaactg
     6001 ttcgataacg ccgaaactca cgccgctgcc gccatgcacc gccacgccgg aaggcttatc
     6061 gatcaccaaa agcgcatcgt cttcgtaaac aacgtcaaac gcacgcgccg gtacggcggc
     6121 acgcctttca gacggcattt ccttctccgc cacgcgcaca ggcggaatcc gcaccgtatc
     6181 cccctccgca atacggctgt cgggtttgca gcgtttcttg ttcaaccgca cctcgccggc
     6241 gcggataatg cggtggatat ggctcttggg aacacccttg aggattttta tcagatagtt
     6301 atcaaggcgt tgacccgcct catgttcggc aacccctatc aagctgaccg aatctttgct
     6361 tatttcgtgc gttttcatct ataatccgaa catccgtttc agcaaaaagc gcgcccgccg
     6421 cgcccccctg aaacggttta ctttaaaacg gaattttata ttaaaaacgc actccgcaaa
     6481 gcattttccc tgcgcctgtt cccagccggc aggcgcagaa cgtaatcaag tttgaattga
     6541 ttttgccgtt tcggcgcgga agttaagacg gcagccgggc cccaagtccc aaacgcaaac
     6601 cgcccaaaac acaggcatca cgataacaag aagaagccgg cccccatttt tccgaccgca
     6661 gcgttcggaa cgcggcagac aaaccgccgc atcgatcttt atagccttct gtatccgacc
     6721 cttccgcaca cggttctccg gaacgtgcat ccctgcggat tttcaactca aaaactgatt
     6781 accggtttta tccgaaaaca tcggaaaacc cagccttacg gaatgccgaa ccggaccggc
     6841 gcgcccgaat gccgcccgtc cacgaggtga tcatgaaaag aatgttattc aacgcaacgc
     6901 aggccgaaga gctgcgcgtt gccatcgtcg acggacaaaa cctgctggat ttggacatcg
     6961 aaacgctggg caaagaacag cgcaaaggca atatctacaa aggcatcatt acccgcatcg
     7021 agccgtcgct ggaagcgtgt ttcgtggatt acggaaccga ccgccacggt ttcttgccgt
     7081 ttaaagaagt ctcccgctca tacttccaag actacgaagg cggacgcgcg cgcatccaag
     7141 acgtgctcaa agaaggcatg gaagtcatcg tccaagtcga aaaagacgag cgcggcaaca
     7201 aaggcgcggc gctgaccacc ttcatcagcc tcgccggacg ctatctggta ttgatgccga
     7261 acaacccgcg cggcggcggc gtatcccgcc gtatcgaagg cgaagaacgt caagaactca
     7321 aagccgctat ggcgcaactc gacattccga acggcatgag catcatcgcc cgtaccgccg
     7381 gcatcggccg cagcgcggaa gagttggaat gggatttgaa ctatctcaaa caactctggc
     7441 aggcgattga agaagcagga aaagcgcatc acgaccctta cctgctcttt atggaaagct
     7501 cgctgctcat ccgcgccatc cgcgactatt tccgccccga catcggcgaa attctggtgg
     7561 acaatcaaga agtttacgac caagttgccg agttcatgag ctacgtcatg ccgggcaata
     7621 taggccgtct gaaactctac gaagaccaca cgccgctgtt ttcccgcttc caaatcgaac
     7681 accaaatcga aagcgcgttt tctcgcagcg tcagcctgcc ttccggcggc gcaatcgtca
     7741 tcgaccacac cgaagccctc gtctccatcg atgtcaactc cgcacgcgcc actcgcggcg
     7801 cagacattga agacaccgcg ttcaaaacca atatggaagc cgccgaagaa gtcgcgcgcc
     7861 aaatgcgcct acgagacttg ggcggtttgg tcgtcatcga cttcatcgac atggaaaacc
     7921 ccaaacacca gcgcgatgtg gaaaacgtcc tgcgcgacgc gctcaaaaaa gaccgcgccc
     7981 gcgtgcagat gggcaaactc tcccgcttcg gccttttgga attgagccgc caacgcctga
     8041 aaccagcttt gggcgaaagc agccacgtcg cctgtccgcg ctgcgccggc accggcgtga
     8101 ttcggggcat cgaatccacc gccctgcacg ttttgcgtat ggttcaagaa gaagcaatga
     8161 aagacaacac cggcgaagtg cgcgcccaag tgcccgtcga tgtcgccacc ttcctgttaa
     8221 acgaaaaacg cgccgagctg tttgcgatgg aagagcgttt ggatgtcaac gtcgtcctga
     8281 ttccgaacat ccacctcgaa aacccgcact acgaaatcaa ccgcatccgc accgacgacg
     8341 tagaagaaga cggcgaaccg agctacaagc gcgtcgccga gccggaagaa gacgaatccg
     8401 ccaaaccttt cggcggcgaa aaagccaaag ccgcccgtcc cgaacccgcc gtcaaaggcg
     8461 tgcgccacac cagccccgcc ccgactgccg cccccgagaa aaaaacctcc tggtgggaca
     8521 gcttcaaagc atggctcaaa cgcattttcg gcggcagcga aacccaagcc gcgcccgctg
     8581 ccgaaacctc cgaaaaacgc agcacggcaa accgcagcgg cagccgcgcc aacaaccgcc
     8641 gccaaaaccc gcgccgcagc aaacgcgaag gcagcaaagt agaagtccgc gaagtggcag
     8701 gcaaaactgc cggacaggaa gcgcgtgccg acaaagccga aacgcgcaac aacggcaacc
     8761 gccgccgcaa cgaacgcggc gaccgtgccg ccgaacgcgc caacgaagcg gaaatccaag
     8821 accgcaacat acagcctgcc gcaaccgttg cagatgccgc accgtccgaa accgaagtgc
     8881 aaaccggcaa acgccgccgc aacggcagcc gcaacgaacg cggccaaacc gcgctggaaa
     8941 ccgccgccgt tgccgaaaca gccgttcaga cagcggaaaa cacgccgtcc gaaccgcata
     9001 ccgcagaaga caaaggcagc aagcccaaat ccgaacgcaa ccgccgcgaa cgcgacagcc
     9061 gcgacgccaa agaacgccgc gagcgcaaca atcagcgcga ccgccgtcaa aacggcaaaa
     9121 aacgcaatat cccgtctgcc gccaaaatcg agcagtacct gaatattcac gacactgccg
     9181 acaaagtccg ttccgccgcc gcacacgttt tcggagaaac cgacgcaaac gcgccgatta
     9241 ccgtcagcat tgccgatccg ctcatcgcca cacccgttca gacggcatct tccgccgttt
     9301 caaacggcga cgcactggtt tatgatgcgg cagaaaaaat ccgccgtgcc gccgccatcc
     9361 tgcccgaagg cgcgacaccg aaagcctcag cacaggaaat gccgtctgaa accgcaacct
     9421 ttacggctgc ggcggaacag gcacgggaaa ccgcacaaac cggcggactc gtcctgatcg
     9481 aaaccgaccc tgccgcattg aaagcatggg cggcacaacc cgaagtccaa accggacgcg
     9541 gtttgcgccg ttccgaacag cccaagccgt ctgaagccgc aaccgtccct gccgaagaaa
     9601 tgatccaagt cgaaacccgg caaggctgaa ccgacggcgg caaaaagagg ttctgttccg
     9661 cagaacctct tttttatata gattcggata cctgcaatgc cgtctgaaac ttcgccattc
     9721 ccgtgattac cgaaacattc cgccattccc atgattcccg caacattccg tcattcccgt
     9781 gaaaacggga atctagaacc tcaaactttc agataacctt tgaatattgc cgccgcccga
     9841 aggcctggat tcccgcctgc gcgggaatga cggtttagaa gttgcccgaa acctcaaaaa
     9901 aaaaccgaaa ccgaacaagc cggattcccg caacattccg tcattcccgt gaaaacggga
     9961 atctagaacc tcaaactttc agataatctt tgaatattgc tgccgcccga aggtctggat
    10021 tcccgcaaca ttccgtcatt cccgtgaaaa cgggaatcta gaacctcaaa ctttcggata
    10081 atctttgaat attgccgtcg cccaaaggcc tggattcccg cctgcgcggg aatgacggcg
    10141 gagggtggac gatgccgtct gaaactgcgc cattcccatg attaccgcaa cctttcgtca
    10201 ttcccgccac ctttcgtcat tcccgtgaaa acgggaatct agaacctcaa actttcagat
    10261 aatctttgaa tattgccgcc gcccaaaggt ctggattccc gcaacattcc gtcattcccg
    10321 tgaaaacggg aatctagaac ctctaaactt tcagataatc tttgaatatt gccgtcgccc
    10381 aaaggcctgg attcccgcct gcgcgggaat gacgatttgg aaattacccg aaacccaaaa
    10441 acaactgaaa ccgaacagac cggattcccg cctgcgcgga aatgacgggt cttttatcat
    10501 ctttaaaggc tgccgcgcgc catctcgacg gcggtctcca cggcagttat caggctgccg
    10561 gaatccgccc tgccggttgc cgccaaatcg agcgcggtgc cgtgatcgac ggaggtgcgg
    10621 ataaagggca gccccagcgt gatgttcacg ccctgtccga agctgtggta tttcaacacg
    10681 ggcagccctt ggtcgtggta catcgccaat acggcatccg caccttcgag cataaacggt
    10741 tggaacaagg tatccgccgg atacgggccg gcgaggttta tcccttcgcg gcgcaggttt
    10801 tccaatgcgg ggataatggt gtcggtttct tcgtgtccga ggtgtccgct ctcgccggcg
    10861 tgggggttga gtccggcgac taggattttg ggatttttga tgccgaattt gtgttttaag
    10921 tcgtgatgca aaatgcgtgc gacgctttca atcagcggtt gcgtgatggc ggcggcaacg
    10981 tctttcagcg gcaggtgggt cgttacgagg gcgacgcgca ggcctttgcc ggcaagcatc
    11041 atcacaacct gccccgtgcc gcttttttcc gctagatatt cggtgtgccc gctgaaaaaa
    11101 cctgtgcttg cgcgcgcgtc gttgatgatg cctttgtgca gcggcgcggt aacgatgccg
    11161 tcgaaaatgc cgtctgaaat gcctgcgagc gcggtgtcca aaagttgcag cacataggcg
    11221 gcgttggcgg gattgagccg ccctgccgca accgcttcgg cggtcggaat gtgcagcact
    11281 tccagctcgc cttctccggg tgcgccgcct gattccggat cgaagtcgcg caagacgacg
    11341 cttttgccca aggcttcggc gcgcgcgcgc aataggtttt tgtcgcccaa taccgcgcag
    11401 cggcagggca ggcgtgcaaa cgccaagtcc aaacaaatat cggggccgat gccggcaggc
    11461 tcgccggaag taacggcaaa aacaggctgt ttcatcgtgt ttgctccaaa caaaatgcga
    11521 ttctaacgcc gcagccgcgc ggcgatgtaa atttttctga ttttgttgac aatctgctag
    11581 aatgggcgtt tacaaaattt aaaccctgct tgcataccgc caatatgtgc gagtttcaac
    11641 tttaaggaag cgatatgaac gagaacttta ccgaatggct gcacggctgg gtcggcgcca
    11701 tcaacgatcc gatgtggtca tacttggttt atatgctttt gggtacgggg cttttcttca
    11761 ccgtaaccac gggctttgtc caattccgcc tgttcgggcg cagcatcaaa gaaatgctcg
    11821 gcggccgcaa acagggggac gaccctcacg gcatcacgcc gtttcaggca tttgtaaccg
    11881 gccttgccag ccgcgtgggc gtgggcaata tcgcgggcgt ggccatcgcc atcaaagtcg
    11941 gcggaccggg cgcggtgttt tggatgtggg taaccgcctt aatcggtatg agttcggcgt
    12001 ttgtcgaatc ttcgctggcg cagctcttta aagtccgcga ctacgacaac caccatttcc
    12061 ggggcggccc tgcctactac atcactcaag ggctggggca gaaatggctg ggcgtgttgt
    12121 tcgccctgag cctgattttc tgtttcggct ttgtgtttga agcggttcag accaatacca
    12181 ttgccgatac cgtcaaagcg gcgtggggtt gggagcctca ttatgtcggc gtcgccctgg
    12241 tgattttaac cgcgccgatt atcttcggcg gcatcaggcg catatctaaa gcggcggaaa
    12301 tcgtcgtccc cctgatggcg gttttgtacc tctttatcgc gcttttcatc attttgacca
    12361 atattccgat gattccggac gtgttcggtc agattttttc gggcgcgttc aaattcgacg
    12421 cggcagcagg cggcttactc ggcggtctga tttcgcaaac gatgatgatg ggcatcaaac
    12481 gcggcctgta ttccaacgag gcgggtatgg gttccgcgcc gaacgccgcc gccgccgccg
    12541 aagtgaaaca ccctgtttcg caaggtatga ttcaaatgct gggcgtgttt gtcgatacca
    12601 tcatcgtttg ttcttgcacc gccttcatca tcttgattta ccaacagcct tacggcgatt
    12661 tgagcggtgc ggcgctgacg caggcggcga ttgtcagcca agtggggcaa tggggcgcgg
    12721 gcttcctcgc cgtcatcctg tttatgtttg ccttttccac cgttatcggc aactatgcct
    12781 atgccgagtc caacgtccaa ttcatcaaaa gccattggct gattaccgcc gttttccgta
    12841 tgctggtttt ggcgtgggtc tatttcggcg cggttgccaa tgtgcctttg gtctgggata
    12901 tggcggatat ggcgatgggc attatggcgt ggatcaacct tgtcgccatc ctgctgctct
    12961 cgcccttggc gtttatgctg ctgcgcgatt acaccgccaa gctgaaaatg ggcaaagacc
    13021 ccgagttcaa actttccgaa catccgggcc tgaaacgccg tatcaaatcc gacgtttggt
    13081 aaatcccgcc cttaccagag ccgcttcccc gcgaagcggc ttttcccttt ccgcacactg
    13141 taaaaacagg gcgaacaagc gtacaatccc aaccctttac ttttgaatcc atttcgtttt
    13201 tcagacggca tattgaatat agtggtttaa caaaaatcgg gacaaggcgg cgaagccgca
    13261 gacagtacag atagtacaga accgattcac ttggt
//
LOCUS       DAWKOX010000041        13161 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.041, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000041 DAWKOX010000000
VERSION     DAWKOX010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13161
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.041"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            44..457
                     /locus_tag="WJK78_000841"
     CDS             44..457
                     /locus_tag="WJK78_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ7597788.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVHRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLAFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            503..1132
                     /gene="nth"
                     /locus_tag="WJK78_000842"
     CDS             503..1132
                     /gene="nth"
                     /locus_tag="WJK78_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ7597789.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1270..2769
                     /locus_tag="WJK78_000843"
     CDS             1270..2769
                     /locus_tag="WJK78_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ7597790.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIKHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSSNAENDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLRAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            2971..4491
                     /locus_tag="WJK78_000844"
     CDS             2971..4491
                     /locus_tag="WJK78_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ7597791.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETTVSDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4548..5633
                     /gene="nagZ"
                     /locus_tag="WJK78_000845"
     CDS             4548..5633
                     /gene="nagZ"
                     /locus_tag="WJK78_000845"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ7597792.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTGEEKQRLLDPAVGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHSNPEAVTRLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLIPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELRDDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQAAQAFVAALASPQDTAGGVKVGEAF"
     gene            5714..5790
                     /locus_tag="WJK78_000846"
     tRNA            5714..5790
                     /locus_tag="WJK78_000846"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5748..5750,aa:Pro,seq:cgg)
     gene            complement(6125..6763)
                     /locus_tag="WJK78_000847"
     CDS             complement(6125..6763)
                     /locus_tag="WJK78_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ7597793.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLNPAPPQIDYVATSPKACYAAKYENSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(6760..7131)
                     /locus_tag="WJK78_000848"
     CDS             complement(6760..7131)
                     /locus_tag="WJK78_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ7597794.1"
                     /translation="MKLLFILLVLFVAVEHFYIAWLEMTQIPSEKAAETFKLPYEFME
                     QNRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGVTVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(7381..7737)
                     /locus_tag="WJK78_000849"
     CDS             complement(7381..7737)
                     /locus_tag="WJK78_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597795.1"
                     /translation="MNTTSSMIQEEGIIAESIDVINKFVQFLLKLYDDFGIDGMHDLV
                     DPDLDTLESIVKNLQQEVDKLPISPNDFSLENKKISLAQGLLYAQSMITNVRNKDTEE
                     CSRNRSMLKNNQSSLY"
     gene            complement(7846..8268)
                     /gene="queD"
                     /locus_tag="WJK78_000850"
     CDS             complement(7846..8268)
                     /gene="queD"
                     /locus_tag="WJK78_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ7597796.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGIIKGG
                     AKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNSRECQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(8275..8793)
                     /locus_tag="WJK78_000851"
     CDS             complement(8275..8793)
                     /locus_tag="WJK78_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ7597797.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTKMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            complement(8821..9480)
                     /gene="queC"
                     /locus_tag="WJK78_000852"
     CDS             complement(8821..9480)
                     /gene="queC"
                     /locus_tag="WJK78_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ7597798.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERASWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            9585..10010
                     /locus_tag="WJK78_000853"
     CDS             9585..10010
                     /locus_tag="WJK78_000853"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597799.1"
                     /translation="MPSEHAAYADLTASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSECGIAGAAVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAVQAFVPDGKIGYNIGHQCPTY"
     gene            10025..11251
                     /locus_tag="WJK78_000854"
     CDS             10025..11251
                     /locus_tag="WJK78_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ7597800.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMIPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(11272..11553)
                     /locus_tag="WJK78_000855"
     CDS             complement(11272..11553)
                     /locus_tag="WJK78_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7597801.1"
                     /translation="MIHEEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDAATSHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            complement(11632..11766)
                     /locus_tag="WJK78_000856"
                     /pseudo
     CDS             complement(11632..11766)
                     /locus_tag="WJK78_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(11765..12223)
                     /locus_tag="WJK78_000857"
     CDS             complement(11765..12223)
                     /locus_tag="WJK78_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597802.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNIQTLD"
     gene            complement(12787..12990)
                     /locus_tag="WJK78_000858"
     CDS             complement(12787..12990)
                     /locus_tag="WJK78_000858"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597803.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
BASE COUNT         3112 a         3484 c         3241 g         3324 t
ORIGIN      
        1 gtacaatccg tcgccgattt ttgcctgttt gagactgttt gcaatgatgc ccgcctacgc
       61 ctacgccgcg ctcgcttttt ccgccttcac ttccgccacc ctcctgcccg gcacatccga
      121 agccgccttt gccctgttcg tccaccgctt tcccgaacac gcatacggcg cgttgctgtg
      181 cgccggcctt gccaacggat tgggcagtat ggtttcctat tggatggggc gtttgctgcc
      241 ctcccgaaaa atgccgtctg aaaaaacact gaatctgatg cggcgtttcg gtatttggct
      301 gcttgcgttt gcctggctgc ccgtcgtcgg cgacgcactg ccgcttgccg ccggctggct
      361 gcggttgaat ccgtggacaa gcgggctgat gctggttatc ggcaaaacgg cgcgttacgc
      421 cttcattctg tggggaatgc aatattacgc cgcctgaacc atacgttata atgccgaaca
      481 cacaaaccca ccgtataaaa aaatgaacag acacatccgc caagaaatct tcgaacgctt
      541 ccgcgccgcc aacccccatc cgaccacaga actcaacttc aactcccctt tcgagctttt
      601 aatcgccgtt ttactgtcgg cacaggcaac cgacgtcggc gtaaacaaag cgacggcgaa
      661 gctgtttccg gttgccgata cgccgcaggc gatgctggat ttgggtttgg acggcgtgat
      721 ggaatacacg aaaaccatcg ggctgtataa aaccaagtcc aagcacatca tgcaaacctg
      781 ccgcatcctg ctggaaaaat acaatggcga agtgccggaa gaccgcgagg ctttggaatc
      841 gttgccgggc gtggggcgca aaacggcaaa cgtggtattg aacacagcgt tcggacaccc
      901 cgttatggcg gtcgatacgc atattttccg cgtgtccaac cgaaccaaaa tcgcccccgg
      961 gaaagatgtg cgcgaagtcg aagacaaact gatgcgcttc attcctaaag aatttctgat
     1021 ggacgcgcac cactggctga ttttgcacgg acgctacacc tgcaaggcac tcaaaccgca
     1081 atgccaaacc tgcatcatca acgatttgtg cgaatatccc gccaaagcct gaccgccgcc
     1141 gcccttcaaa atgaaacgct tgaaaattcg gacggacgtt gtagaatttc aacctatgcc
     1201 gtctgaagcc gacaaaatgc gcttcagacg gcattaaagc cggtaccggc atccgacaaa
     1261 ggacaaaacg tgttcaaaaa ataccaatac ctcgctttgg cagcactgtg tgccgcctcg
     1321 ctggcaggct gcgacaaagc cggcagcttt ttcggtgcgg acaaaaaaga agcatccttc
     1381 gtagaacgca tcaaacacac caaagacgac ggcagcgtca gtatgctgct gcccgacttt
     1441 gtccaactgg ttcaaagcga aggcccggca gtcgtcaata ttcaggcagc ccccgccccg
     1501 cgcacccaaa acggcagcag caatgccgaa aacgattccg acccgcttgc cgacagcgac
     1561 ccgttctacg aatttttcaa acgcctcgtc ccgaacatgc ccgaaatccc ccaagaagaa
     1621 gcagatgacg gcggattgaa cttcggttcg ggcttcatca tcagcaaaga cggctatatt
     1681 ctgaccaata cgcacgtcgt taccggcatg ggcagtatca aagtcctgct caacgacaag
     1741 cgcgaatata ccgccaaact catcggttcg gatgtccaat ccgatgtcgc ccttctgaaa
     1801 atcgacgcaa cggaagagct gcccgtcgtc aaaatcggca atcccaaaga tttgaaaccg
     1861 ggcgaatggg tcgccgccat cggcgcgccc ttcggcttcg acaacagcgt gaccgccggc
     1921 atcgtgtccg ccaaaggcag aagcctgccc aacgaaagct acacaccctt catccaaacc
     1981 gacgttgcca tcaatccggg caactccggc ggcccgctgt tcaacttaaa aggacaggtc
     2041 gtcggcatca actcgcaaat atacagccgc agcggcggat tcatgggcat ttccttcgcc
     2101 atcccgattg acgttgccat gaatgtcgcc gaacagctga aaaacaccgg caaagtccaa
     2161 cgcggacaac tgggcgtgat tattcaagaa gtatcctacg gtttggcaca atcgttcggt
     2221 ttggacaaag ccggcggcgc actgattgcc aaaatcctgc ccggcagccc cgcagaacgt
     2281 gccggcctgc gggcgggcga catcgtcctc agcctcgacg gcggagaaat acgttcttcc
     2341 ggcgaccttc ccgttatggt cggcgccatt acgccgggaa aagaagtcag cctcggcgta
     2401 tggcgcaaag gcgaagaaat cacaatcaaa gtcaagctgg gcaacgccgc cgagcatatc
     2461 ggcgcatcat ccaaaacaga tgaagccccc tacaccgaac agcaatccgg tacgttctcg
     2521 gtcgaatccg caggcattac ccttcagaca cataccgaca gcagcggcgg acacctcgtc
     2581 gtcgtacggg tttccgacgc ggcagaacgc gcaggcttga ggcgcggcga cgaaattctt
     2641 gccgtcgggc aagtccccgt caatgacgaa gccggtttcc gcaaagctat ggacaaggca
     2701 ggcaaaaacg tccccctgct ggtcatgcgc cgtggcaaca cgctgtttat cgcattaaac
     2761 ctgcaataac ccacataatt taaccaaaat attttttaaa tgataaaatg cccgtcaata
     2821 ccgattaacg ggcattttac aaaaatcagt tggttgattt taaacaaata ttttttacga
     2881 caaaaaatat ttccgcccat tttgccaaca aaacccaaac cggaggcgga cagatacgct
     2941 cccatccgga cgcttaatac ccccataacc atgcagctga tcgactattc acattcattt
     3001 ttctcggttg tgccaccctt tttggcactg gcacttgccg tcattacccg ccgcgtactg
     3061 ctgtctttag gcatcggtat tctggtcggc gttgcctttt tggtcggcgg caaccccgtc
     3121 gacggtctga cacacctgaa agacatggtc gtcggcttgg cttggtcaga cggcgattgg
     3181 tcgctgggca aaccaaaaat cttggttttc ctgatacttt tgggtatttt tacttccctg
     3241 ctgacctact ccggcagcaa tcaggcgttt gccgactggg caaaacggca cattaaaaac
     3301 cggcgcggcg cgaaaatgct gaccgcctgc ctcgtgtttg taacctttat cgacgactat
     3361 ttccacagtc tcgccgtcgg tgcgattgcc cgccccgtta ccgacaagtt taaagtttcc
     3421 cgcgccaaac tcgcctacat cctcgactcc actgccgcgc ctatgtgcgt gctgatgccc
     3481 gtttcaagct ggggcgcgtc gattatcgcc acgcttgccg gactgctcgt tacctacaaa
     3541 atcaccgaat acacgccgat ggggacgttt gtcgccatga gcctgatgaa ctattacgca
     3601 ctgtttgccc tgattatggt gttcgtcgtc gcatggtttt ccttcgacat cggctcgatg
     3661 gcacgtttcg aacaagccgc gttgaacgaa gcccacgatg aaactaccgt ttcagacgct
     3721 accaaaggtc gtgtttacgc actgattatt cccgttttgg ccttaatcgc ctcaacggtt
     3781 tccgccatga tctacaccgg cgcgcaggca agcgaaacct tcagcatttt gggggcattt
     3841 gaaaataccg acgtaaacac ttcgctggta ttcggcggca cttgcggcgt ccttgccgtc
     3901 gttctctgca cgctcggcac gattaaaacc gccgactatc ccaaagccgt ttggcagggt
     3961 gcgaaatcta tgttcggcgc aatcgccatt ttaatcctcg cttggctcat cagtacggtt
     4021 gtcggcgaaa tgcacaccgg cgattacctc tccacgctgg ttgcgggcaa catccatccc
     4081 ggcttcctgc ccgtcatcct cttcctgctc gccagcgtga tggcgtttgc cacaggcaca
     4141 agctggggga cgttcggcat tatgctgccg attgccgccg ccatggcggt caaagtcgaa
     4201 cccgcgctga ttatcccgtg tatgtccgca gtaatggcgg gggcggtatg cggcgaccac
     4261 tgctcgccca tttccgacac gaccatcctg tcgtccaccg gagcgcgctg caaccacatc
     4321 gaccacgtta cctcgcaact gccttacgcc ttaaccgttg ccgccgccgc cgcatcgggc
     4381 tacctcgcat tgggtctgac aaaatccgcg ctgttgggtt ttggcacgac aggcattgta
     4441 ttggcggtgc tgatttttct gttgaaagat aaaaaacgcg ccaacgcctg acccctttcc
     4501 ctgttcagac ggcatatgcc gtctgaagct ttttggagca aaccgcaatg accgtccccc
     4561 atattccgcg cggccccgtc atggcagaca ttgccgcctt ccgcctgacc ggagaagaaa
     4621 aacaacgcct gctcgatccc gccgtaggcg gcatcatcct cttccgccgc aacttccaaa
     4681 acatcgaaca gctcaaaaca ctcaccgccg aaatcaaagc cctccgcaca cccgaactca
     4741 tcatcgccgt cgatcacgag ggcggaaggg tgcaacgttt catcgaaggc ttcacccgcc
     4801 tgcccgcaat gagtacgctc ggcgagattt gggacaaaga cggcgcgtcc gccgccgaaa
     4861 ccgccgccgg acaagtcggc cgggttttgg caaccgagct ttccgcctgc ggcatcgact
     4921 tgtccttcac gcccgtctta gatttggact ggggaaactg ccccgtcatc ggcaaccgca
     4981 gtttccacag taaccccgaa gccgtaaccc gcctcgccct cgcccttcaa aaaggtttgg
     5041 caaaaggcgg tatgaaatcc tgcggcaaac attttcccgg acacgggttt gtcgaagggg
     5101 acagccattt ggtgctaccc gaagacgggc gcagcctcga cgaactcgaa gccgccgacc
     5161 tcattccttt ccgcattatg agccgcgaag gtatggcggc ggttatgccc gcccacgtcg
     5221 tttatccaca agtggacaca aagcccgccg ggttttccga aatctggctg aaacagattt
     5281 tgcgccgcga catcgggttc aaaggcgtga ttttctcgga cgatttgact atggagggcg
     5341 cgtgcggggc aggcggcatc aaagaacgcg cccgcatttc ctttgaggca ggttgcgaca
     5401 ttgtcctcgt ctgcaaccgt cccgaccttg tggacgaact gcgcgatgat ttccgcattc
     5461 ccgacaatcc cgctttggcg caacgttggc aatacatggc caacacgctc ggcagcgccg
     5521 ccgcgcaagc cgttatgcag acggcggatt tccaagcggc gcaagccttt gttgccgccc
     5581 ttgcctcgcc gcaggataca gcgggcggcg taaaagtcgg cgaagccttt taaatccgcc
     5641 cgacacgcgg caaaaaggca aaacggtata ggcacgccgt attttttgcg ctataatcac
     5701 gccttactta attcggaatg tagcgcagcc cggtagcgca cttcgttcgg gacgaagggg
     5761 tcggaggttc gaatcctctc attccgacca aatccaaacc gcctcggcat ccattgccgg
     5821 agcggttttt ccttttggcg tcaacagaaa aatgccgtct gaaacagcat tctgtttcag
     5881 acggcatttc gttttcccta acccttctat ttgcgtgcac tgacaaaggg tatcggcaag
     5941 gttcaaaaga ccatcggaat ttaggaagcc gggcttgtac ccaacggcag catcttattc
     6001 agtaaggctc cgtcctgatt gggcggtgga aataccggca tttccacgca gaagcggcac
     6061 actttccccg tatgtcaaac atcggtaaaa cggtacgccg gccctttgag ttacactgct
     6121 taaactactc tattcccgcc catttgtgcg tctgcacgct caactgccaa tgcacggatg
     6181 cgtcggggcg actgtttaaa ataccgattt ggcggatggt gtcgtagatg ttcatcgcac
     6241 cgtcttgctc acagggcgaa aggtagtaat gatgtgcgcg gattttgcgt tccatgtttt
     6301 cgcagaacgc aaggacatca ccatcggcaa caatccgcac ttcgtcggct gtttcgatac
     6361 agctattttc atatttggcg gcgtagcagg ctttggggct ggtggcgacg tagtcgattt
     6421 gcggcggcgc gggattgagt ccgttggttt cgagacagag gaaatagcct tccgccttga
     6481 gcgtgtccag cagcatatcg agatgcggct gtatggtcgg ttcgccgccg gtgatgatga
     6541 tgttgcgggc ggcataggtt ttcagacagc ctaagatgtc ggacaggctc atcatgccga
     6601 atgtcaaata atcggtatca caccagccgc aggcgaggtt gcatttgccc aagcggacga
     6661 aaacggcggg catgcccgtg ttccagcctt cgccttgcag gctttcaaag atttcgacga
     6721 tgcggtattg gggattttcg ggggcaacat tgattttttt cataccgcca acaccgccgc
     6781 cgctgccaaa aatgcgggca aaccttgttt gacgagtatg cctttgttgc cggaagagaa
     6841 cgcgccccac gcggcggcaa tcaggacgaa gccgagaaac agtaccgtca cgccgtacac
     6901 cgcgttatcc ggcgcagcaa accgcgacca caccagcccg atgccgagaa agccgttata
     6961 cagcccttgg ttgccgaaca gggtctgcac gcgattttgt tccataaatt cataaggcag
     7021 cttgaacgtt tccgccgctt tttcgctggg aatctgtgtc atttcaagcc aggcgatgta
     7081 gaaatgttcg acggcgacga agaggactag gaggatgaag aggagtttca tgggtaagca
     7141 ccttaatttg cactaagatt tatatttaac aaactttacc aattttattt aacaaaaaag
     7201 ccacccatta tggatggctt ctctaccaaa acttttcatg ctactttttt catggttgca
     7261 gcttttgctt tataagctcg tttttcaatt tgtctttgaa tagctgcaag ttgcttcgtt
     7321 aatgcagcaa tgcgagcgaa acggatatcc attgatttca taaataactc cttgctgttg
     7381 ttaataaagg ctcgactgat tatttttgag catagaacga ttccgagaac attcctcagt
     7441 atctttattt ctaacgttag taatcataga ttgtgcgtag agaagtcctt gagccaaact
     7501 aatttttttg ttttccaaag aaaaatcatt gggactgatc ggaagtttat caacctcttg
     7561 ttgtaaattt ttcacaatgg attccaaagt atccaaatca ggatcaacta aatcatgcat
     7621 accatcaatc ccaaaatcat cgtacagttt caaaagaaat tgtacgaact tattaattac
     7681 atctatgctc tcggcaataa tgccttcctc ttgaatcata ctactagttg tattcatggt
     7741 tattatgcct gaaattttct attacggtcg attttttaga aagtatggaa ttttacaatt
     7801 gattatatga caagtcaaaa caaatcttta aaatttgttt caatattact ccccttcata
     7861 ctccgcacac gatgtcggcg tttcccacaa tttgacgcgg cacacgttca gccccgcgtt
     7921 tttcagacgg tcgtacattt cgaccgccat attttcggca gtggtgcggc agggcaggcg
     7981 cagggttttc atgttccagc cctccaaaag cgcggcgatt tggcattcgc ggctgttgcc
     8041 gccgtggtag atgaaggcgt ggtcgaaggg gtcggtaatg tgttgtttga caatggcttt
     8101 caagtcggta aagtccatca ccataccgtc tttcgcgccg cctttgataa tgccgtctga
     8161 aacggtgatt tcgagtttgt aggtatgtcc gtgcaggttt tggcatttgc cgtcatgccc
     8221 gtcgagcata tgcgaggagt cgaaggtgaa gattttggtg attttcatgg gttctcaaat
     8281 gggcaaatag ccttgaaagc cgatttcggc gggtttgccg tgcggattcg gggtcaggcg
     8341 gatatggaaa ttgccgatgc ggtcgagcgc aagcaggttg tccacgtctt ttaagttgtc
     8401 tttatgttgc tgaacatagc tgtcggtcaa cagggtttgc agggcttttt gtttggcttc
     8461 ggcaggcgtg gcggcggcga acagcccaaa agcgtgcgct tcggcgagct gccctgcgcg
     8521 ataaccgccg acattggcga aatacaggcg cggggcgtgt tcagacggca ttttcgtttt
     8581 gggcgtttcg gatacggcga tgtcgtaacc gtccgcccat tcgacaacct gccagccgtc
     8641 gatgtggatt ttgtccgcat cgccgaacca cgcggctttg agtgcgggga cggcttcacg
     8701 gtagtcgtcg cacacggcaa attggatgtc gtgcacttcg atattcgacc tgccggcatt
     8761 gccgccgagg taaaacatat ggagcttggg catatcgtat tccttatggt ttgcgcgtgt
     8821 tcagacggcc tttttacttt ccagatattc cgccagcccg cgttcgcgca agatacagct
     8881 cgggcattcg cggcagccgc cgacgatgcc gttatagcag gtgtgggttt gctcgcggat
     8941 atagtccagc gcgcccattt cgtccgccaa cgcccaagtt tgcgccttgg tcagatacat
     9001 cagcggcgtg tggatttgga aatcatagtc catcgccaga ttaagggtaa cgttcatgga
     9061 tttgacgaac acgtcgcggc agtcaggata gccggagaag tcggtttcgc acacgcccgc
     9121 gatgatgtgc cgtatcccct gccctttggc gtaaatcgcg gcatagagca ggaaaagcgc
     9181 gttgcggccg tctacaaagg tattcggaac gccgttttcg gcagtttcga tggcggcggt
     9241 gtcgtccatc agggcattgt gcgtaatctg ccgcatcagg ctcaagtcga gtacggtttg
     9301 tttgacgccc aaatcctgcg caatccagct ggcacgttcc agctcgacgg catggcgttg
     9361 cccgtattgg aaagtaatgg cttggacgtt ttcgcgcccg tagatttgga ttgcctgaat
     9421 caggcaggtg gtcgaatcct gaccgcccga aaagatgacc aaggcttttt ggtttgacat
     9481 atcgaatcct agttttggta acgcgggagg tttgcgaacc gcgaagttgg acagtaaaga
     9541 cgcggattat acaggcaaac gcgttcagac ggcatctgaa cgccatgccg tctgaacacg
     9601 cggcttatgc cgacttgacg gcgagttccg ccaagcgttt gctttgtgcg aaggcgatat
     9661 tgttttcttc ggcggtcagg acgggagccg ctgtcgggaa tatctttttt gacggcttcg
     9721 cagacggcgg agactttggg gacggtgcgc aatacggctt cgcaaccttc aacgctgtcg
     9781 atgccgcgag cgattcggag tgcgggattg cgggtgctgc cgttttggaa atagtagagg
     9841 acgaggattt tgagggggat ttgggttcat gggcggattc cgttaaaatg gttcggtctt
     9901 cagacggcat aacagttgtt ccgatgccgt ctgaaacagc cgcagttcag gcatttgttc
     9961 ctgacggcaa aattggctat aacatcgggc atcaatgccc aacttactga ccgggcaaga
    10021 aattatgacc tttttacaac gtttgcaagg tttggcagac aataaaatct gtgcgtttgc
    10081 atggttcgtc gtccgccgct ttgatgaaga acgcgtaccg caggcggcgg caagcatgac
    10141 gtttacgacg ctgctggcac tcgtccccgt gctgaccgtg atggtggcgg tcgcttcgat
    10201 tttccccgtg ttcgaccgct ggtcggattc gttcgtctcc ttcgtcaacc aaaccattgt
    10261 gccgcagggc gcggacatgg tgttcgacta tatcaatgcg ttccgcgagc aggcgaaccg
    10321 gctgacggca atcggcagcg tgatgctggt cgttacctcg ctgatgctga ttcggacgat
    10381 agacaatacg ttcaaccgca tctggcgggt caattcccag cgtccgtgga tgatgcagtt
    10441 tctcgtctat tgggctttac tgacgttcgg gccgctgtct ttgggcgtgg gcatttcctt
    10501 tatggtcggc tcggtacagg atgccgcgct tgcctcaggt gcgccgcagt ggtcgggcgc
    10561 gttgcgaacg gcggcgacgc tgaccttcat gacgcttttg ctgtgggggc tgtaccgctt
    10621 cgtgccaaac cgcttcgttc ccgcgcggca ggcgtttgtc ggggctttgg caacagcgtt
    10681 ttgtctggaa accgcgcgct ccctcttcac ttggtatatg ggcaatttcg acggctaccg
    10741 ctcgatttac ggcgcgtttg ccgccgtgcc gttttttctg ttgtggctga acctgttgtg
    10801 gacgctggtc ttgggcggcg cggtgctgac ttcttcactc tcctactggc agggagaagc
    10861 gttccgcagg ggcttcgatt cgcgcggacg gtttgacgac gtgttgaaaa tcctgctgct
    10921 tctggatgcg gcgcaaaaag aaggcaaagc cttgcctgtt caggagttca gacggcatat
    10981 caatatgggc tacgacgagt tgggcgagct tttggaaaag ctggcgcggt acggctatat
    11041 ctattccggc agacagggtt gggtgttgaa aacgggggcg gattcgattg agttgaacga
    11101 actcttcaag ctcttcgttt accgtccgtt gcctgtggaa agggatcatg tgaaccaagc
    11161 tgtcgatgca gtaatgatcc cgtgtttgca gactttgaac atgacgctgg cagagtttga
    11221 cgctcaggcg aaaaaacagc agcaatcttg agtatttttg aaactgtatt tttatcctaa
    11281 agacattttc ctatctgctg attccaccgt ttcctttctg tgtgccgcca taatttttat
    11341 gatagacaag ccattcaagt ttgcattgac tgctttttca ttggcaatat ccaaatggct
    11401 ggtcgctgca tctaaaaata ggattttcgg ttcgcaatat aaggcccgcg ccaatacgat
    11461 gcgttgtttt tgtccgcctg acagtgcgct gcccatatcg ccgatcaagg tttcatagcc
    11521 cataggcatg gcggagattt cttcgtgaat catagcaagg caggcgcaat gttcgatttt
    11581 tcctctatcc ggttccgtat cgaaaaaaca aggggctgta ctagattagc cctaaatccc
    11641 acaccaatcc cgcaggattt taagctgttg agacggtgtg ccgaagttaa atcgaaattc
    11701 gcattctttc aagaacagcg ggaaagattt acgatcgatt ccgttgtatt ttcgcaagac
    11761 gcgtttagtc tagagtctgt atattacatt tatttttagg gtctgctagc caatttcttg
    11821 ttcccttcat tattttatct tctgaaagaa aattattttt ttccatgcta ttaatattaa
    11881 tgatatgatt tttatttaaa ataatttttc catataaaat ttccggtttg taatagcaag
    11941 agtctgaagc aaatccttgc ccgtcaatat aagaaaaata aatgttatca tcctccttat
    12001 aatattctaa aaccaatccg gatattattt tatcaaaatt cccttcattt ccatctttca
    12061 tgactaaaat ataattagca ggccaacctt tatcgtaaac atattcaaac tgatagttcc
    12121 cgaaactctc gatatccgaa ctaaaaaaga agaaaagcaa attaatagcc aatacaaaaa
    12181 caaataagaa caaaaatagc aaaattttca acttagttaa caatatttac ctctccttta
    12241 aattcaatcc tgaaaggtac cccttaccct gggctaccaa ttatagtttc catatttcta
    12301 aatattgttt ttacattact tttttctccc cccaaaggaa tgcattttaa aatcatgctt
    12361 ttcaggtgct aatcgatact taccattaac atctttaatc acagatatat ttccatgtat
    12421 agcccaacgt gaaaaatctg agtattatat acagttatac cttactgaaa caaagctagc
    12481 tgtacatatc tgtaccatat ttttactaca aacaaaaaat atttataatt attaaggata
    12541 agataaaaac ccccaacgct agattaattc ttaataattt caaataaaaa atatttgaga
    12601 ttttttcttt tccaaataat atattgaaat atttaaagtt aaggtagctt gatttaagta
    12661 gaaaatcaaa aaaaccatta attaattttt cttctttaaa tattttatat gatattataa
    12721 aattaaataa cattgcgaaa acatatgaaa tcatcaaaat accaaatata tagtgggaat
    12781 gcattattat ttagctcctt cttttggctc tgacaaattg acagtccatt gatatccaat
    12841 gcttgcattt gcaattgctg acgcacctgc ccctgttttc cctgttagta tcaatggttc
    12901 ttttcttgca agatgtgcac ctgcacaacc acctaatact aaaccaccac ctattgtaaa
    12961 tccttcctgt tgtatctcta atgataacat tttcttcttg tgccgccctt aatacagatt
    13021 gtggaattgg attgacctga gcaggaactt ctaaaataag ttttccttca agctgtcttc
    13081 ctcttagcga agcaggtgta cttggaacat tggaaatgac aaagtgagtg cgcaaagcca
    13141 cctgaaggcg atgtgtttga a
//
LOCUS       DAWKOX010000042        12995 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.042, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000042 DAWKOX010000000
VERSION     DAWKOX010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12995
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.042"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(65..1375)
                     /locus_tag="WJK78_000859"
     CDS             complement(65..1375)
                     /locus_tag="WJK78_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ7597804.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            complement(1514..2692)
                     /gene="ftsZ"
                     /locus_tag="WJK78_000860"
     CDS             complement(1514..2692)
                     /gene="ftsZ"
                     /locus_tag="WJK78_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ7597805.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(2811..4055)
                     /gene="ftsA"
                     /locus_tag="WJK78_000861"
     CDS             complement(2811..4055)
                     /gene="ftsA"
                     /locus_tag="WJK78_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ7597806.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            complement(4141..4869)
                     /locus_tag="WJK78_000862"
     CDS             complement(4141..4869)
                     /locus_tag="WJK78_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ7597807.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            complement(4859..5773)
                     /locus_tag="WJK78_000863"
     CDS             complement(4859..5773)
                     /locus_tag="WJK78_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ7597808.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            complement(5887..7296)
                     /locus_tag="WJK78_000864"
     CDS             complement(5887..7296)
                     /locus_tag="WJK78_000864"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ7597809.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            complement(7451..8518)
                     /gene="murG"
                     /locus_tag="WJK78_000865"
     CDS             complement(7451..8518)
                     /gene="murG"
                     /locus_tag="WJK78_000865"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ7597810.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(8522..9847)
                     /locus_tag="WJK78_000866"
     CDS             complement(8522..9847)
                     /locus_tag="WJK78_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ7597811.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(9973..11310)
                     /locus_tag="WJK78_000867"
     CDS             complement(9973..11310)
                     /locus_tag="WJK78_000867"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ7597812.1"
                     /translation="MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNSDDVFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGKKNGVVFIDDSKGTNVGAT
                     AAAITGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCDLN
                     MTDCATLEEAVQKAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            complement(11395..11775)
                     /locus_tag="WJK78_000868"
     CDS             complement(11395..11775)
                     /locus_tag="WJK78_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ7597813.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYAEGQGVRQDYVEAVRWFRKAADQGLAQAQFNLGAMYYKGHGVRQDRALAQE
                     WLGKACQNGNQDGCDNDQRLKAGY"
     gene            complement(11890..12972)
                     /locus_tag="WJK78_000869"
     CDS             complement(11890..12972)
                     /locus_tag="WJK78_000869"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ7597814.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
BASE COUNT         3074 a         3720 c         3291 g         2910 t
ORIGIN      
        1 aatatatcgg caaacaaaat gccgtctgaa aacctttcag acggcatttt taatatcgaa
       61 tcaatcagcc caaataccag aatttcagtg cccacaatac ggcaacaatc cataccatag
      121 gcggaacgtc tttggtgcgg cggcataaaa gtttaaccac ggcatagctg atgaagccga
      181 aggcgatgcc gtctgcaatc gaataggtaa acggcatgaa gacaatggtc aggaatgcgg
      241 gtgcggcttc cgtcatatcg tcccaatcaa tatccctcgc actgcggagc atctgcgtgc
      301 cgacataaag cagggcgggc gcggtggcaa aagcgggaac acttttcgcc aaaggtgaaa
      361 acatcaggca ggcgagcatc aatacgccga cggtaaccgc cgtcaggccg gtccgtccgc
      421 ctgccgatac gcccgccgcg ctttccacat aaggcgtggt ggaagaagta cccaaagccg
      481 cacctgccac aatggcggta gagtctgcaa gcagtgcgcg tttcaggcgg ggcagcttac
      541 cgtccaccag cagcccggca cggtgggata tgccgaccag cgttccggta ctgtcaaata
      601 gatcgaccaa gaagaagacg aaaatcacac tgaccatgct gacggtaaac aggccttcaa
      661 aatccatctg cataaaagtc ggcgcaatgc tcggtacttc gccgatgatg ccgtgaaatt
      721 cattcaaacc catcaggctg gcaatgacgg taatggtcaa gatggtgatg atgattgcgc
      781 cttgaacgcg gaaatgtccc aatacgacca ccatagcaaa accgaacaat gccaacaacg
      841 cggacggctg atgaatatcg cccaaaccga ccaaggttgc cggattggca acgataatgc
      901 ctgcgccttt cagggaaatc agtgccaaaa acaaaccgat accggcagca atcgacattt
      961 tcaaacccat aggcagtgcg ttgaccagca tttccctgac tttaaaaaag ctgaacagga
     1021 taaaaatcag accggagatg aacaccgcac ccaacgcaac ctgccaaggc acgcccatac
     1081 ccttaacgac ggcaaaggtg aaataggcat tcagccccat ccccggtgcg agtgcaatcg
     1141 gatagttgcc gacaaaaccc ataacaaaac agccgatggc agacgcgata caggtagcga
     1201 cgaataccgc ccccatatcc atgccggtct cgcccaaaat cagagggttg acgataacga
     1261 tgtagcacat cgtcaaaaaa gttgtcaaac ccgccatcaa ctcggtacgc accgtcgtac
     1321 cgtttgcctt cagcttaaaa atcccgtcca acagtgtttg ttttgaagtg tccatatctg
     1381 aaagtctgta tcaagtggaa aaatctgaat ccgccgaccg caaaccgtac gaaattgcaa
     1441 catcttgaaa aacatacctc ccaaaccgga caaaccgatt cgggaggcag caggtttacg
     1501 ggcaaacagc acattatttg tctgaattgt gttgacgacg caaaatcgca gggatttcaa
     1561 agtcgtcaag tacggactga ttgtcgaaat ccgcagcggt aaggttcatc gtgcggatac
     1621 cgcgattggt gcggatcata ccttcgacat tgtggctttg ctcctgtttg gacggagcaa
     1681 ccgcttctac ctcccttgcc ggaacaaaat cgaccgcgcc tttttctttc agaccggtag
     1741 cgataatggt aatccggatg gcatcttcgc tcatggtctc gtcttcagcc gcaccgaatt
     1801 tgcattccaa atcgggatgc gcgctttggt tgacgatttt catgacttcg gacaactcgg
     1861 acattttcaa gcaacccgga gcagtcgtaa tattgaccag cacaccgcgc gctccgtcca
     1921 aggttacatc gtccagcagc ggactggaaa tggcctggtc ggtcgccata cgcgcacggt
     1981 cgataccttg ggcataaccc gaacccatca tagcgatacc gcggttgctc atcacggttt
     2041 tcacgtcggc aaagtcgagg ttgatgattt cgctcgggca agttaccact tcggaaatgc
     2101 ctgcgaccgc atcgcgcaat acattgtcgg cggcacggaa ggcttcgcgc atcgttacgt
     2161 cttcacccaa tgcagtcatc agtttgtcgt tcgggatgat gatcagcgaa tcgacgtgtt
     2221 ctttcaactg ttccaaccct gcctgtgcga catggacgcg cttaccttca tatgcgaacg
     2281 gtcgggtaac cacggcaacg gtcagaatgc ccaaagactt ggcaatctca gcaacaaccg
     2341 gcgcggaacc ggtaccggta ccgccgccca taccggtcgt gataaacagc atattcgcac
     2401 cgcgaatggc ttcttcaatg gcttcccggt cttcctgggc tgccgcacgg ccgatatcgg
     2461 gattcgcgcc cgcgcccaaa ccgcgtgtca gattcgtacc caactggatt ctcttcgccg
     2521 catggttttt tgccaaagac tgcgcatccg tattggcact gataaactcc acaccgcgca
     2581 cattgttggc aaccatgtta ttgattgcat tgcaaccgcc gccgcccaag ccgattactt
     2641 taatcaccgc agggctgact gccgattctg ccacgtcgta aacaaattcc attcaaaaac
     2701 tcctgctcgc cccattcaga ggacggttta aataaattat tattcattat ataagaagta
     2761 tcttgctgct ggcaaaatac ttctcacctg tcaaacggca atccacctgt tcagaagctg
     2821 ttttcaatcc accgtttcaa tcttgccaac aaaccgccgc ccccttccct ctcttgcact
     2881 gcaccgtttt ccggctgcgg caagtttcct tccagcttgc atgctgcatg aagcagcccg
     2941 atggcggtag aaaagcgcgg tgtgcggacg cggtcggaca aaccgcccat ttcttggggc
     3001 gcaccggtgc gtacaggcaa atcgaagatt ttttcggcaa attccacaat cccggtcatc
     3061 atggacacac cgccggtcag aacgataccc gcattcagca cttctttggg gaaacccgat
     3121 ttttgcagct cgcccagcac tacgccaaaa atctcctgaa tacgtgcgct gatgattgct
     3181 gccaaaacct tactggaaac ctgacgcgat gtccggtcac ccacgcccgg aacttcaatc
     3241 atctcaccca agccttccgt atcgcatgat gccacgccat aatggatttt aatgtactcg
     3301 gcggcatcga gaggtgttct caacgatttg gacaaatctt tggtaatcag attaccaccg
     3361 gccggaatga cggacgtatg gcggatggca ccgttcatat aaacggcaat atcggtcgtt
     3421 ccgccaccaa tgtcgatgac gcatacgccg aggtcttttt catcttcagt cagcaccgcc
     3481 tgcccgcttg ccaacggctg aagcatgatc tgatcgcttt tcaaaccgca ccgctcgata
     3541 catttttgga cattctgcac tgccgtactt gcaccggtaa tgatgtgcac ccgcgtatcc
     3601 agacgcacac cgctcatacc gatgggctcc ctcacgccaa gttgggtgtc aataatgtag
     3661 tcttgaacca cggcatcgag aattttttga tcgggcggga tattgattgc ctttgccgtt
     3721 tcaatggcgc gatcgatgtc tgcctgcgtg acttccccat ctttaatttt aaccacacct
     3781 tgcgaattga gactgcggat gtggttgcct gcgatacctg tggtaacgtg agtaattttg
     3841 gtatccgcca tcagctcggc atcattgacc gcctgcctga tggcttggac ggtggcatcg
     3901 atattggtta ccatgcccgc gcgcaagccc cgtgaaggag cctgccccaa accgacgatg
     3961 ttgattttgt cgtcatcttg aacttccccg atcagtgcga ggactttaga cgtaccgata
     4021 tccagtacgc tgatgtatct ttgctgctgt tccattgttc gtctgctctt aaaactgatt
     4081 gaaatttgcg tcgcaccgtt tcagacggca cggccgtaat ctgtccgata cctgttccca
     4141 ctattcttcg gattcttttt cgggtaaacc gtcggaagca tagcggactg aaaatccgtc
     4201 cttatacctc atatccacat aggataaccg atttttattt ttacgcaaca gatgctgcca
     4261 cgcttcggta aaaagccgga ggcgtttcat ctcgttttcc cttccgagcc tgacggtgat
     4321 gccgttgtcc aaaacgacaa tccacgccga acgtgccgta taggtcatct ctttgatgcc
     4381 caaaccctgt tttgccaaaa cagtcgaaaa ttcgtcataa cggcggagca tttcggcaga
     4441 cgttccttcc gcgcctctga ataccggcat tccgggtctg tccaagcggg cttcaaaaac
     4501 attgccttcg ccgtccacca aggcatggtc gccccaacgc gcgaccggct tgcgctcggt
     4561 caggacgacc tcaaccgtgt cgggaaaacg gcggcgcacc atgaccgacg caatccacgg
     4621 ataccggcgg taggcctcct gtgcgccatt gatgtccgtc ctcaaaatat tcccatggat
     4681 gtattctttc gccaaactgc ccaatgcttt cttatcggaa taaaccaggt tgcccttcag
     4741 cgacacctgc ttgacgggca gatgattcga attgtaaaac caaaccagcc cggacgcagc
     4801 aagcagcatc gccatcatga caagcagcca gcgcgtcagc cgttccatcg cttcggcatt
     4861 atcccacatg tgcggtcttc aaaatttcaa tacataaatc ggcaaaaccc acgcccgtaa
     4921 cggcagcgga tttcggtact aaactatggc tcgtcatacc gggcagggtg ttgatttcca
     4981 acagatagag tttgccgtcg gtatctttga ggaaatcgac gcgcacgcag ccttccgcac
     5041 cgattgcctg cgcgccgcga accgccagtt cgcgcatcag gctttcttcg gcttcggtca
     5101 gatcttccga aggacattga taaatggtgt cgtcgcggtt gtacttggct tcgtagtcgt
     5161 aaaactcggt cgcggggatg atgtgtatgc cgggcaggcc tttgccgttc aggacggggc
     5221 aggaatattc gccgccgccg ataaaccgtt cggcaatgat ttcgccctga aggtgtttca
     5281 attcttcgta aacgcttttc agacggcctt tttctttgac ttttaccaca ccgacgctgc
     5341 tgccttcggc cgccggtttc acaaacatcg gcaggcccaa tttttcttcg acggcatcga
     5401 aatcagtgtc gtcgtgcagg acggcgaact cgggaacggg cagccccaat gcctgccaaa
     5461 tcagtttgca gcggtatttg tccatgccga tggcggaggc ggcgacaccg ctgccggtat
     5521 agggaatgcc caacagttcc aacgcgcctt gaaccgcccc gtcttcgccg taagtaccgt
     5581 gaaggatgtt gaatgccgtc tgaaaacctt gtgccttcaa ttcagacaat ggggtttcct
     5641 tgggatcgaa ggcgtatgcg tctatgcctt tgctttttaa agcgttcaaa atggcggtgc
     5701 cgctgtccag cgagatttct cgttcgctgg aaaaaccgcc catcaatacg gccactttgc
     5761 caaaattctg cattgttttt tgttctttcc tgattgcttt atgcttgttg ccagaggtcg
     5821 tctgaaacct gatttgcggt ttcagacgac ctttatatga tgttccgtct gtcaggaggg
     5881 tgtgcctcaa atctgtttcg acaattccag tagcgcggcg ggaacgcggt tgatgcttcc
     5941 cgcgcccata ttcaacacga tgtcgccgtc ctgcaaaacg ttcaacagca tttcgggcag
     6001 atcggcaacg ttttcgcagt aaatcggctc gagtttgccc aacacgcgga tggcgcgggc
     6061 aagagcgcgg gaatcggcgg cggcaatcgg ctcttcaccg gcggcataaa cttcggtcag
     6121 caccagcgcg tcaacggtat tgaggacttt ggtaaagtct tcaaacaaat cgcgcgtgcg
     6181 ggtatagcgg tgcggctgga aggcgagtac caaacgtttt tccggatacg cgccgcgtgc
     6241 ggcggcaagg gtcgccgcca tttcgacggg gtggtgtccg tagtcgtcca ccaagagcgc
     6301 ggtcccgccg tttggcaact tgatgtcgcc gtatttttgg aagcggcggc cgacgccttc
     6361 aaagccgagc aagccttttt ggatcgcttc aaccgatgcg ccgacttcca gcgccacgcc
     6421 gatggctgcc aatgcgttca gcacgttgtg tctgccgggc atattcagca cgacttcaaa
     6481 cgacccctgc tcatgtcctt tcatttgaac atggacggtg aatttcattt gcgcgccgac
     6541 gttttcgatg tcggtggcgt agatgtcggc ggtatcgtcc aaaccgtaag tagcataagg
     6601 tttgctcact ttgggcaaaa tcgcgcggac gtgttcgctg tcaatacaca aaaaggcttt
     6661 gccgtagaag ggcatacggt ggatgaaatc gataaacgcc tgatgcagct tctcaacact
     6721 gtgcccgtag gtatccatat ggtcttcgtc gatattggta acgacggaca taatcggtgt
     6781 caggtgcaga aaggatgcat ccgactcgtc ggcttcggca acgatgtatt cgcctttgcc
     6841 caagcgggcg ttggtgcctg cggcgttgag tttgccgccg ataacgaaag tcgggtcaag
     6901 tcctgccgcg ccgaggatgg aggcggtcag gctggtggtc gtggttttgc cgtgcgtgcc
     6961 ggcaatggcg atgccgtcac ggaagcgcat caactccgcc aacatcaggg cgcgcggaat
     7021 aacgggaatt tgctgctcca acgcagcgac aacttcggga ttttcttttt tgacggcggt
     7081 agaggtaacg acgacatccg caccgttaac gtgttctgcg gtatggccgg gataaacttg
     7141 aatgcccagg ctgcccaaat gctcggtagc ggcatttcgc gcctgatccg aaccggaaac
     7201 tttaaaaccc aaattgtgca agacttcggc gatgccgctc atgccgacgc cgccgatacc
     7261 gacaaaatgg atgttggtaa ctcgattttt catcataatg ttgcgttccg gttggttttt
     7321 agtgcgtaaa ggcgttattt taaagggctg accgtttgcg cgccatagtt ttctgacaaa
     7381 tatatagcgg attgaaataa aaaacatcca tgccgtctga acggcttttc agacggcatg
     7441 gttcggcagt ttacgccgca cacgcaatcg cggcttcggc aacgtcgtcc gcactgtgcg
     7501 gcagtgccaa agtacgggcg ttttctgccc atttgagaca tttttcgcgg ttcaggctgc
     7561 cgaggatttc ggcgagtttt tccgccgtca actgggtttg cggcaacagc aatcccgcct
     7621 ccgcctgcac cataaaacgt gcgttggcgg tttgatggtc atcaacggcg tgaggatacg
     7681 gcactaacaa cgcacccaat cccgccgccg tcaactcggc aatcgtcagc gcgccggcac
     7741 ggcaaatcac caaatcggca tcgcggtagg cggacaccat gtcggtaata aattccacac
     7801 attcggcttt cacgcccagc gcgtcgtaat ccgcctgcaa gctgcccagc ttgccccgtc
     7861 ccgattggtg gtacatctgc ggacgcgcat tgtcgggcag caaagccaat gcctgcggta
     7921 cggttttgtt caaaacgtcc gcgcccaaac tgccgccgac caccaaaatt ttcagacggc
     7981 cttcacgccc ttggaagcgt tcggcaggca cgggcaggtt gctaatatcg gcgcggacgg
     8041 ggttgccgac caagccgcct tcgtggctga acgctttcgg aaaagcgtac aacacccgct
     8101 tcgcccagcg cgacaggtgg cggttggaca aacctgccac ggcgttttgc tcgtgaatca
     8161 caatcggcac gcctaatagc ttcgccgcca aaccgccggg gaaggtaacg aagccgccga
     8221 agccgatgac gcactcgaca cggtgtttgc ggataatccg ctgcgcttcg cggacggttt
     8281 gatacaaagt aaacggcagc atcagcttgc gtttgatgcc gttgccgcgc acgcctttaa
     8341 tcgccagcgt ttccaagcgt atgccgtatt gcggcacgat acgctcttcc atcgaatcct
     8401 tgctgcccag ccaaatcaca tgatggccgc gcgcgcgcaa tgaatccgcc accgccagcg
     8461 cggggaaaat atgtccgccc gttccgcccg ccatcagcat aaaggtttta ccgcccatga
     8521 tttactccac ccgataaccg cgcattttcc ggcggttttc ataatctata cgcaacagca
     8581 gcatcatgct gatcagcatg aaaaagactg acgaaccgcc ataggacatc aacggcagcg
     8641 tcagaccttt ggtcggcaaa gcaccgatgt tcacaccgat attgaagaaa ctttggatac
     8701 cgatccaaat gccgataccc gaagcgatat aggcgttgaa agtcaaaccc aaatcgcgcg
     8761 actgcttgcc gatggaaaac gcccgcacca ccagccagcc gtaacagaat atcagcacac
     8821 acataccgaa gaaaccgaat tcttcggcga tgatggcaaa aataaaatcg gtatgcgctt
     8881 ccggcagaaa gccgcgtttg ctcaaactcg cacccaaacc cataccgaac cactctccgc
     8941 gcccgattgc catcagagag tgggtaagct ggtagccggc accctgaggg tctttccacg
     9001 ggtccaaaaa tgccactacc cgctgcacac ggtagggagc ggcggtaatc atcagcacca
     9061 tcccgcccaa gacgctgcct accaggacga aaaaatattt ccacggcaat cctgccaaaa
     9121 acagcattcc aacggcaatg acggtaatga cgacaaacga accgaaatcc ggctgtacca
     9181 ttatcagcac caaaccgaac gccaccagca taatcggcag gatgatcgcc cggaaacggc
     9241 cgtacatttc taatgtttca cgacgtgcct gcggattggt ggcggacatg atcagattgg
     9301 ccgtcccccg ccaaatcgac tgccaaccca aactttccat gctgcgcaac acttcttcac
     9361 ggcgcgtgaa caggcttgcc aaataaagga tgaccgccag cttgaacagc tcggtcggct
     9421 ggaaattcaa cggacccaaa ggtatccaac gggtcgcgcc attgatttcg cgcccggcaa
     9481 tcaatacgac taccagcaac aggccggata gggcaaaaat ccacggcaca agccgccgcc
     9541 atgtcctcat cctgcaaaga aaccataaaa aaccgctcgc tatcaagccg gcaacgacga
     9601 accccgcctg tctggtcaaa tagaaaaact gatcgccgcc ttccttcgat gccaaataca
     9661 cagaagccga ataaatcatc agcaggctga acgccgtcat cagcaccacc atccacaaaa
     9721 gcggcgcgtc gaatttcctg ccgtcgcgca caatcggtct gtcgagcagc agagtgtgga
     9781 caccgtcgcc cacttttacc aatacttccg aaatcttcaa aaaaaccacc tgccagtctg
     9841 tttgcacctg ccgcaaaggg caaaaatttc agacggcaga caatgccgtc cgaacatacg
     9901 atacatccca aatcggtatt ctaaatcttt acttgccgcc caacaatgac ggcgtttgca
     9961 tttcagacgg catcacaaag ccttaaacgc ttcgataaac acttccgaac ggtgcgcgta
    10021 gcctttaaac atatcaaaac tcgcacaagc cgggctgagc agcacgatat cgcccgcttc
    10081 ggcttgggca tatgccttct gaaccgcttc ttccaaagtg gcgcagtcgg tcatattcag
    10141 atcgcagccg tccaaatcgc ggcggatttg cggcgcatcg acaccgatca ggaacacgcc
    10201 ttttgccttg ccggcaagcg catcgcgcag aggcgtgaag tcctgccctt tgcccatgcc
    10261 gcctaaaatc acgaagagcg gattttgcaa accggtaatc gcggcggcgg tcgcgccgac
    10321 attcgtgcct ttgctgtcat caatgaatac cacgccgttt ttcttgccga ttttttccac
    10381 gcggtgcggc aggccttgga aggttttgac gtgttcaagc aatgcttcgc gcggcaaacc
    10441 gacggcttcg cacaaggcaa cggcagccat cacgttagtg gcgttgtgca agccttgcaa
    10501 cggaatatct tgcgtggcaa tcaaatcttc attgccttgt ttcaggcggc ctgtctcgcg
    10561 ttccaaccaa aaatcggctt cgtgttccaa cgaaaaccat ttcacttcac gccctgcccg
    10621 tttcatggcg cggcagaaca cgtcgtctga attcaaaacc tgaacgccat cgccacggaa
    10681 aatcttggct ttggtatgcg cgtagtcgag caagtcgtcg tagcggtcga gatggtcttc
    10741 ggaaatgttc agcaccgtcg ccgcagtcgg gcgcaggctt tcggtgtttt ccagttggaa
    10801 gctggaaagc tccaacaccc acacgtccgc ctttttgcct tcgcgctgcc attccgcctc
    10861 caaaaccggc gtgccgatat tgcccgcgat aacggtatcc agcccgcact tgatacagag
    10921 atagccgacc aggctcgtta ccgtggtttt gccgttgctg ccggtaatcg caattacctt
    10981 gtcgccgcgg cggttcacaa tgtccgccag caattcgatg tcgcccaaca cgcgtccgcc
    11041 gttttgcttg aacgcctcga tatccggctg ccgctcgctg atgccgggac tgagcgccag
    11101 aatatcgaaa ccgttgtcca gcgcatcttt cagacggccc gtgtaaaaca ccagcccgtc
    11161 aaacatctta ccgatttgcg acacgcgttc cggcttcagc tccgcatcat acgcagcaac
    11221 ctccgcgccg tttttgcgca ggtaggcaat catggaaata cccgtgccgc caagtccggc
    11281 gacgaggatt tttttgtttt ggaaagtcat tttggtttgt cctaaaacaa atcatattgg
    11341 gcagggggat gtctactcct gctcaagccg ctttcagacg gcattgcgag ctgttcaata
    11401 acccgctttc aggcgttggt cattgtcgca gccgtcttgg tttccgtttt gacacgcctt
    11461 gccaagccat tcttgtgcaa gggcgcggtc ttggcgcacg ccgtgccctt tgtaatacat
    11521 tgcgcccaaa ttaaattggg cttgtgctaa cccctgatcc gccgccttac gaaaccatct
    11581 gaccgcttcg acataatctt ggcgcacgcc ttgtccttcg gcatacattg cgcccaaatt
    11641 gtattgggct gctgcatttc cctgtgctgc cgcctgcaag ttttcccgaa aatccgatac
    11701 gtcatccgcc cacaccgctt ggttcaagcc caaggcaatc agggcggcgg caagccattt
    11761 gactgtctgt ttcatggttt tacttctgtt ttagtataag ccgccgttaa cgatagggct
    11821 gggcggattg tcgccgcagg tttattgcgc gttcaaatgc cgtctgaaag gtgttcagac
    11881 ggcataggtt cagcggattt tgagggtact caaaccgatc aacaccaaga cgatggtaat
    11941 aatccaaaag cggacgacga cttgggtttc tttccagcct ttttgttcgt agtggtgatg
    12001 gatgggcgcc atcaggaaga tgcgtttttt ggttttctta taccagccga cctgaagcat
    12061 aacggatacg gcttctacga caaataatcc gcccataatg acgaggacaa actcttggcg
    12121 gacgatgacg gcgacggtac cgagcgcggc acccaatgcc aatgcaccga catcgcccat
    12181 aaagacttgc gcgggatagg cgttaaacca caagaaaccg aggcacgcgc cgcacatggc
    12241 ggtacagaat atagcgactt cgttcgcacc ggcgacatag ggaagctgga ggtattggga
    12301 aaattggtag tgtccgctga cgtaggcgaa gatggcgagg ccggcggcaa cgaggacgac
    12361 ggggaaggtc gcaaggccgt ccaagccgtc ggtgaggttg acggcattgg atgtgccgac
    12421 gatggtcagg taagacaaca ccaaaaagcc gaccacgccc agcggcaggg cgatttgttt
    12481 gaagaacggg acaatcaaaa tattgttggc ggaattggcg gcaaggtaaa acaatgccaa
    12541 accggcgata atggcaacgc ttgactgcca caccattttg aatttggcgg acacgccgtt
    12601 ggggtcttta tagacgactt tgcgccagtc gtcgtaaaaa ccgagtgcgc cggtagcgag
    12661 caatacgccc aagagaatcc agatatacgg gtttgcccag ttgccccaca acagggtgga
    12721 cactgtaatg gcggtcagaa tcagcgaacc gcccatcgtc ggcgtgccgt ttttgacgag
    12781 gtgggtttgc gggccgtcgg tacgcactgc ctgcccgcat ttgagcgcgg tcagcctgcg
    12841 tatcgtccac gggccgaaca tcagggaaaa cgccaaggcg gtcaacgccg ccatgacggc
    12901 gcggaatgtg gtgtattgaa aaatattcag accggttaac cagttgctga aatgtgcgag
    12961 ccataaaaac atggggcttc ctttttttgt tttgt
//
LOCUS       DAWKOX010000043        12932 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.043, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000043 DAWKOX010000000
VERSION     DAWKOX010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12932
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.043"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..2237
                     /gene="mfd"
                     /locus_tag="WJK78_000870"
     CDS             <1..2237
                     /gene="mfd"
                     /locus_tag="WJK78_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ7597815.1"
                     /translation="LPPGKSNLHGQIQQQPAPSPVGEGWGEGKAVAAQSAIAVITESD
                     LYQYVARSRAHNRRKKHAAVSDGLLRDLAEINIGDPVVHEEHGIGRYMGLITMDLGGE
                     TNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALHKLGSGAWNKAKRKAAEKAR
                     DTAAELLNLYARRAAQSGHKFEINESDYQAFADGFGYEETEDQAAAIAAVIKDLTQAK
                     PMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTTLLVEQHAQNFADRFADFPV
                     KVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDDIKFKNLGLVIIDEEHRFGV
                     RQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSLITTAPSRRLAVKTFVKPFS
                     EGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLLPEARIGVAHGQLRERELEQ
                     VMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKFGLAQLHQLRGRVGRSHHQA
                     YAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLEIRGAGEILGEGQSGEMIQV
                     GFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSPALLPESYCPDIHERLVLYK
                     RLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLRLMAKELGIDAIDAAGEAVT
                     VTFGKNNNVDPTEIILLIQNDKKYRLAGADKLRFTAEMENIEVRINTVKNVLKTLQNR
                     CLPK"
     gene            2386..2769
                     /locus_tag="WJK78_000871"
     CDS             2386..2769
                     /locus_tag="WJK78_000871"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ7597816.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            2791..3633
                     /gene="kdsA"
                     /locus_tag="WJK78_000872"
     CDS             2791..3633
                     /gene="kdsA"
                     /locus_tag="WJK78_000872"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ7597817.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCTHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPYQCQPV
                     AEVCDVIQLPAFLARQTDLVVAMAKTGNVVNIKKPQFLSPSQMKNIVEKFHEADNGKL
                     ILCERGSSFGYDNLVVDILGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            3648..4088
                     /locus_tag="WJK78_000873"
     CDS             3648..4088
                     /locus_tag="WJK78_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ7597818.1"
                     /translation="MMQTFRKISRYVATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAILTRLQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSMIFMATALLSAVLSWRLSGKDAV"
     gene            4136..5422
                     /gene="eno"
                     /locus_tag="WJK78_000874"
     CDS             4136..5422
                     /gene="eno"
                     /locus_tag="WJK78_000874"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ7597819.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            5436..5714
                     /gene="ftsB"
                     /locus_tag="WJK78_000875"
     CDS             5436..5714
                     /gene="ftsB"
                     /locus_tag="WJK78_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ7597820.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(5755..6045)
                     /locus_tag="WJK78_000876"
     CDS             complement(5755..6045)
                     /locus_tag="WJK78_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ7597821.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
     gene            complement(6243..7376)
                     /gene="nrdB"
                     /locus_tag="WJK78_000877"
     CDS             complement(6243..7376)
                     /gene="nrdB"
                     /locus_tag="WJK78_000877"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ7597822.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(7437..8624)
                     /locus_tag="WJK78_000878"
     CDS             complement(7437..8624)
                     /locus_tag="WJK78_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction enzyme"
                     /protein_id="HEZ7597823.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(8621..9631)
                     /gene="dcm"
                     /locus_tag="WJK78_000879"
     CDS             complement(8621..9631)
                     /gene="dcm"
                     /locus_tag="WJK78_000879"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7597824.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KK"
     gene            complement(9689..11968)
                     /gene="nrdA"
                     /locus_tag="WJK78_000880"
     CDS             complement(9689..11968)
                     /gene="nrdA"
                     /locus_tag="WJK78_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ7597825.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAAKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRAEIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            12497..12808
                     /locus_tag="WJK78_000881"
     CDS             12497..12808
                     /locus_tag="WJK78_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ7597826.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRDTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFHSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         3403 a         3346 c         2926 g         3257 t
ORIGIN      
        1 gcctgccccc cggtaaaagt aatctgcacg ggcaaatcca acagcaacct gccccctccc
       61 ccgtggggga gggttgggga gagggcaaag cagttgccgc tcaaagtgcc atcgccgtca
      121 tcaccgaatc cgatctctac caatacgtcg cccgttcgcg cgcccacaac cgccgcaaga
      181 aacacgccgc cgtttcagac ggcctgttgc gcgaccttgc cgaaatcaat atcggcgatc
      241 ccgtcgtgca cgaagaacac ggcatcgggc ggtatatggg cttgatcaca atggatttgg
      301 gcggcgaaac caacgaaatg atgttgctcg aatacgcagg cgaagcgcag ctttatgtgc
      361 ccgtttcgca actgcattta atcagccgct actccggtca ggcgcatgaa aacattgccc
      421 tgcacaagct cggcagtggc gcgtggaaca aggcgaagcg caaagccgcc gaaaaggcgc
      481 gcgataccgc cgccgagttg cttaaccttt acgcccgacg cgctgcccaa tcgggacaca
      541 agtttgaaat caacgagtcg gactatcagg cgtttgctga tggcttcggc tacgaggaaa
      601 ccgaagacca ggccgccgcc atcgccgccg tgattaaaga tttgacgcaa gcgaagccga
      661 tggatcgcct tgtgtgcggc gatgtcggct tcggcaaaac cgaagttgcc ctgcgcgccg
      721 cgtttgtggc ggtgatgggc ggcaaacagg tcgccgtact cgccccgacc acgcttctgg
      781 tcgagcagca cgcgcaaaac tttgccgacc gtttcgccga tttccctgtg aaagtcgcta
      841 gcctttcgcg tttcaacaac agcaaagcca ctaaagccgc gctggaaggc atggcggacg
      901 gcacggtcga catcgttatc ggcacgcaca aactggtgca ggacgacatc aaattcaaaa
      961 acttaggttt agtgattatc gacgaagaac accgcttcgg tgtgcgccaa aaagagcagc
     1021 tcaaacgcct gcgtgccaat gtcgacatcc tcaccatgac cgccacgccg attccgcgta
     1081 ctttaagtat ggcgttggaa ggactgcgcg acttctcgct gattaccacc gcgcccagcc
     1141 gccgcctcgc cgtcaaaacc tttgtcaaac cctttagcga aggcagcgtg cgcgaagccg
     1201 tgttgcgcga actcaaacgc ggaggacagg tatttttcct gcacaatgaa gtagatacga
     1261 ttgaaaatat gcgcgagcgg ctggaaaccc tgctgcccga agcccgcatc ggcgtggcgc
     1321 acggacaact gcgcgagcgc gagctggaac aagtcatgcg cgacttttta cagcaacgat
     1381 tcaacgtgtt gctctgttcc accatcatcg aaaccggtat cgacattccc aacgccaaca
     1441 ccatcatcat caaccgcgcc gacaaattcg gactggcgca actgcaccag cttcgcgggc
     1501 gcgtcggacg cagccaccac caagcctacg cctacctgct cacgcccgaa tacatcacca
     1561 aagacgcaga aaaacgcctc gacgccatcg cggcagcaga cgaactcggc gcaggtttca
     1621 ccctcgccat gcaggatttg gaaatccgcg gcgcaggcga aatcctcggc gaagggcagt
     1681 ccggcgaaat gatacaggtc ggcttcacgc tctacaccga aatgctcaaa caagccgtgc
     1741 gcgatctcaa aaaaggccgc caacccgacc tcgacgcgcc gctgggcatc accaccgaaa
     1801 tcaaactgca cagccccgcc ctactgcccg aaagctactg ccccgacatc cacgagcgtc
     1861 tcgtcctcta caaacgcctc gccgtctgcg aaaccgtgca gcaaatcaac gccatacacg
     1921 aagaactcgt cgaccgcttc ggcctgcccg aacaacccgt caaaaccctt atcgaaagcc
     1981 accacctgcg gcttatggca aaagaattgg gtatcgatgc cattgatgcg gccggcgaag
     2041 cggtaacggt aaccttcggt aaaaacaata atgtcgatcc aaccgaaatc atcctgctga
     2101 ttcagaacga caaaaaatac cgccttgccg gcgccgataa gctgcggttt accgcagaga
     2161 tggaaaatat cgaggtcaga atcaacaccg taaaaaacgt tttaaaaacc ttgcaaaaca
     2221 gatgcctgcc caaataaagc cgacaccgca atgccgtctg aaacaccgtt ttccttgtcc
     2281 gaaagccgcc attatgaatt tgaaggaaac tccactataa tacggcattc agatttccag
     2341 acggcatcgc gcccgtcaga ccgcacacaa accaaaagga aatacatgtt ccgtactatg
     2401 cttggcggaa aaatccaccg cgccaccgta accgaagccg atttgaacta cgtcggcagc
     2461 attaccgtcg atcaagatct gttagacgcg gcaggcatct accccaacga aaaagtcgcc
     2521 atcgtcaaca acaacaacgg cgaacgtttt gaaacctata ccatttcagg taaacgcggc
     2581 agcggcgtga tttgtctgaa cggtgctgcg gcaaggctgg tgcagaaagg cgatatcgtc
     2641 atcatcatgt cttacgtcca actctccgaa cccgaaatcg ccgcgcatga acccaaagtc
     2701 gtcttggtag acggaaacaa caaaatccgc gacatcatct cctacgagcc gccgcacacc
     2761 gtgctgtaac cctgaaaacg gacattgatc atggatatta aaattaacgg cattaccgtc
     2821 ggtaacgatg ctcctttcgt actgttcggc ggcatcaacg ttttagaaga tttggattcc
     2881 accctccaaa cctgtacgca ttacgtcgaa gttacccgaa aactcggtat tccctatatc
     2941 tttaaagcat ctttcgacaa ggcaaaccgt tcctccatcc attcttatcg cggcgtaggc
     3001 ttggaagaag gcttaaagat ttttgaaaaa gtcaaagcgg aattcggcat ccccgtcatt
     3061 accgacgtac acgaacccta tcagtgccaa cccgtcgccg aagtgtgcga tgtcatccag
     3121 cttcccgcat tccttgcgcg gcagaccgat ttagtggttg ccatggcaaa aaccggcaac
     3181 gtcgtcaaca tcaaaaaacc tcagttcctc agcccctctc aaatgaaaaa cattgtggaa
     3241 aaattccacg aagccgacaa cgggaaactg attttatgcg aacgcggcag cagcttcggc
     3301 tacgacaacc tcgttgtcga tatactcggt ttcggcgtga tgaaacagac ttgcggcaac
     3361 ctgccggtta ttttcgacgt tacccattcc ctgcaaaccc gcgatgccgg ttctgccgca
     3421 tccggcggtc gtcgcgcaca ggctttggat ttggcacttg caggcatggc aacccgcctt
     3481 gccggtctgt tcctcgaatc gcaccccgat ccgaaactgg caaaatgcga cggccccagc
     3541 gcgctgccgc tgcacctttt agaagatttt ttaatccgca tcaaagcatt ggacgattta
     3601 atcaaatcac aaccgatttt aacaatcgag taacacggtt tcgccttatg atgcagactt
     3661 tccgaaaaat cagccggtat gtcgcaacct tgtggctcgg tatgcagatt atggcgggtt
     3721 atatcgccgc accggtgctg ttcaaaatgc tgcccaaaat gcaggcgggc gaaattgccg
     3781 gcgtattgtt cgacatcctc tcttggagcg ggcttgccgt ttggggcgcg gtgttggctg
     3841 ccgcctttgc catcctgacc cgactgcaaa ccgccctgct gcttttttta ttgtccgccc
     3901 ttgccgccaa ccaatttttg gttacccccg ttatcgaggc actgaaatac gggcatgaaa
     3961 attggctgtt gtcgtttgta ggcggatcct tcggaatgtg gcacggtatt tccagcatga
     4021 ttttcatggc aaccgcccta ctttcagcag ttttaagttg gcggctttcc ggcaaagatg
     4081 ccgtctgaag ccctcccatt tttttacctc ccttcacttc acttggagaa cattcatgag
     4141 cgcaatcgtt gatattttcg cccgcgaaat tttggactca cgcggcaacc ccacagtcga
     4201 gtgtgatgta ttgctcgaat ccggcgtaat gggacgcgca gccgtaccga gcggcgcgtc
     4261 caccggtcaa aaagaggctt tggaacttcg cgacggcgac aaatcccgtt attcgggcaa
     4321 gggcgtattg aaggcggtcg aacacgtcaa caaccaaatc gcccaagccc tcattggtat
     4381 cgatgccaac gagcaatctt atatcgacca aatcatgatc gaattggacg gtactgaaaa
     4441 caaaggcaat ttgggtgcga atgcgacttt ggcggtttct atggcggttg cacgcgccgc
     4501 tgccgaagac tcaggcctgc cgctttaccg ctacttgggc ggcgcaggcc cgatgtccct
     4561 gcccgtaccg atgatgaacg tcatcaacgg cggcgaacac gccaacaaca gcctgaacat
     4621 ccaagagttt atgattatgc ccgtcggcgc aaaatctttc cgcgaagcgt tgcgctgcgg
     4681 tgcggaaatt ttccacgcct tgaaaaaact gtgcgacagc aaaggcttcc cgaccacagt
     4741 cggcgacgaa ggcggtttcg cccccaacct gaacagccac aaagaagccc tgcaactgat
     4801 ggtcgaggcg accgaagccg ccggctacaa agcgggcgaa gacgtattat tcgcattgga
     4861 ctgcgcctcc agcgagttct acaaagacgg caaataccac ttggaagccg aaggccgctc
     4921 ctacaccaac gcggaatttg ccgaatatct ggaaagtctg gtcaacgagt tccccatcat
     4981 ctccatcgaa gacggcatgg atgaaaacga ctgggaaggc tggaaactgc tgaccgaaaa
     5041 actgggcggc aaagtccaac tcgttggcga cgacctcttc gttaccaacc cgaaaatcct
     5101 tgccgaaggc attgaaaaag gcgtggcaaa cgcactattg gtcaaagtca accaaatcgg
     5161 tactttgagt gaaaccctga aagccgtcga tctggcaaaa cgcaaccgct acgccagcgt
     5221 gatgagccac cgctccggcg aaaccgaaga cagcaccatt gccgacttgg cagtcgccac
     5281 caactgtatg cagatcaaaa ccggttcttt gagccgttcc gaccgcatgg cgaaatacaa
     5341 ccaactgctg cgtatcgagg aagaattggc ggaagccgcc gactaccccg gcaaagccgc
     5401 attctaccaa ctgggcaaat aaaaaaggtt aaggtatgaa gtgggtaact gtcgttttat
     5461 ccttcgcact tgtctgttgc caatacagcc tctggttcgg caaaggcagc atcggacgca
     5521 acagcagtct gagagaacag attgccgttc aagaagaaaa aaaccagaca ctcgccctac
     5581 gcaatcattc ccttgccgcc gaagtctatg atttggaaaa cggtcaagaa gccatttcgg
     5641 aaatcgcccg ggtagaactg ggttatatcc aagacggtga aaccttttac cgactcatca
     5701 ggcataaccg gtaataccgt caaaaagccg tccgaaccaa tgttcggacg gcttttattt
     5761 caacaaactg tcagacagcc cctcatcctc ccccgacaaa ccgcaatcca gcctgacatc
     5821 cccctcgacg caacagcagc acggcagtat ctcgtcccgc cccaaaaaag ccaaaggcgg
     5881 ctcccgataa gtaacgcttc cctccaaaat cttcactcgg cacgatccgc aatatccgct
     5941 tcggcactga tattccacca tatgccccgt ccgttccaag ccttccaaca gggtctcgcc
     6001 ctccaagagc tcaaaaaaac ccttattcgt accaatgcgc gccatttccg accaatcaaa
     6061 aatatagtgg attaaattta aaccagtacg gcgttgcctc gccttgtccg gatttttgtt
     6121 aatccactat aatccactat aaaaggaaca ataaccgatc ctacccgctg tttttcccat
     6181 catacaacat acaaatgccg tctgaaacat ccggcttcag acggcatttt ttcaaaaaac
     6241 atttacaact caaaatcgcc caaatcatcc gtattcactt cagaatctat ctgaccgatc
     6301 aaataagagg atatttccac ttcctgcggc gcgacctgta cgttgtcgga cgacagccac
     6361 gcattaatcc acggaatcgg gttttgattt gcgccttcaa atccggccgg caaccccacc
     6421 gcctgcatac gcagattggt aatatattcg acgtattggg ataagatttc tttgttcaaa
     6481 ccgatcatcg aaccgtcctt aaacaaatat gccgcccatt ctttttcctg ttccgccgct
     6541 tttttgaaga gttggaaaca ttcgtcctgc aactcggcgg caatttccgc catttcagaa
     6601 tcatcaacac cagaacgcat cagattaagc atatgctgcg tgccggtcag gtgcagggct
     6661 tcgtcgcggg caatcagttt gatgattttg gcgttgcctt ccatcaactc gcgctcggca
     6721 aaagcaaacg agcaggcgaa tgaaacgtag aaacggatgg cttccaacac attgacgcac
     6781 atcaggcaga gatagagttt tttcttcaac ccgcgcaaag acacggtaac gggtttgccg
     6841 ccgacattgt gcaccccttc gcccaacagg ttgtaatact gggtgtattc gattaagtca
     6901 tcgtaatagc aggcaatgtc ttcggcgcgg gcggtaatgt attcgttttc gacaatatca
     6961 tcaaacacga ccgacggatc attcacaata ttgcggatga tgtgggtata gctgcgcgag
     7021 tggatggttt cgctgaagct ccacgtttca atccacgttt ccaactcggg aatcgaaacc
     7081 aaaggcagca aagcaacatt cggactgcgc ccttggatgg aatcgagcag tgtttggtat
     7141 ttcagattgc tgatgaaaat atgtttttcg tgttctggca ggttggcgta gtcgatacgg
     7201 tcgcgcgaca cgtcgatttc ttccggccgc caaaaaaacg acaattgttt ttcaatcagt
     7261 ttttcaaata cctcgtattt ctgctggtca taacgggcga cattaaccgg ctgaccgaaa
     7321 aacatcggct cattcagcgc gtcgtttttg gttttgggaa aggtgctgta tgacatagtt
     7381 aagtgttcgc aggacataat ctattctcta tattaattaa aaatgatctg taagttttaa
     7441 ctaacctgct gagactttat atatttaata aaattttcta aagttaaaac atgggttttc
     7501 ccaaaagttc caaatgtttt tacggattct ttagggacaa ctaaggttaa attctcatca
     7561 ctcatttcct gaatttgagt atcagatata ccttcttgta gagtaaataa atgcttatga
     7621 ggaattcgat ctgcttcatt taaaacttgg cgccagcgat ccttacaagt agtctttgaa
     7681 cctagcattg tcagcttttc agtttgaaat atgaaattcc ctgattcatc catcgcatgg
     7741 tactcttcac ttccaggaaa taaaaaatct ggtttctttt tcccttctgt cttcgcttgc
     7801 gtctcaaatt ttaaggaaaa ttcgtcaaat attcttgata aatgtaactc taaagatttt
     7861 cctgctcttg cttttctgcg atttgtaaaa gaatgtgcaa aattaatgaa gctatccaaa
     7921 tcagtaattt ttgatttaat aatttcaaat tcacgttttt caaaaatgga aaataattca
     7981 tattcctttg aaacccattg ttttaacaca ttactaacgt tagttttatt taatgcaata
     8041 ttttcccttg ccaaaactgc catttcttca gttttgggga agttaggaaa tagtgaaaat
     8101 aattttgtta ggttatcctc tacttcttgt tttttaggta aatataaact tcctggtaaa
     8161 atgttagttt ctgcgataaa tatttcaata tcttcatctg aagataaaac aaaagcatgg
     8221 aataataaat ctttataaca agctctgcac aataccaata aggaaccact atatttatca
     8281 cttaaaaatt caaaattctt gccaaaaccc gtaattctcg cctcatttct cgtgccttgg
     8341 ccgtaatatt taaaattgct attagtgacg cttccatctt gccaattaat tttgattgaa
     8401 atagttttat ttgttccctt ttggcaaact acatcaaaga ggtcgtctga aaaatgtttt
     8461 tgaatataaa atcctgattg gtgactacca gtagtaccaa catcattggg acgaatataa
     8521 cgacagtata ctgcaattga tttatttgct gtctgtattg ctgaagctac taagtcatcg
     8581 gatttattta ctacttgtat tgtctgagct gccaagtcat tcattttttt aactcattta
     8641 taatttgttt agcaatagct tgaaccaacg gtacagcaat tgaattgcca aactgcttgt
     8701 atgcagctgt cttggatact gcatcaataa caaaatcttt aggaaatccc attaaacgcg
     8761 agcactccct aggtgtcagc ttcctaggat tttttccttt ctgagggatg agtatttcgg
     8821 aaccatcttt gtaatatcgt gcagatagag ttcgtgatat tccatctaaa tcaactaatc
     8881 caaaaccaaa tccattaccc tttgccttat gttttttagc gtaattttga aggtaaagcc
     8941 ataagttatc agaaagagta aaagaattat ctacatcatc ttccaaaatt tgctttaatt
     9001 ttggttgtga ttctggtggg gaaggaaaat tgaaatttat ttccttatta aaatattgtc
     9061 tatcaaaacc tacaataaaa atacgctccc tattttgagg aacataatat tttgcattca
     9121 taacttgata aaatatctga tagtcaagct cttctaaagt ccctttaatt actttaaatg
     9181 tatttccttt gtcatgcgaa acaaggtttt tcacattctc taaaagaaaa attttaggtc
     9241 gatgttttcc aataatttca gcaacatcaa aaaatagagt tccctgcgcc ttatctaaga
     9301 agcctgtttc tcgtcctagg ctttttttct ttgaaacacc agctatagag aatggctgac
     9361 acgggaatcc tgctgttaat acatcaaact tacttggaat agctgctttg gtttccttta
     9421 atgtaatatc tccataagga atatcattaa aatttacttg gtaggtttga cgggctttat
     9481 catcccattc actagaaaat acacatcgcc caccaacatt ctccattgca atgcgaaaac
     9541 cacctattcc cgcaaataaa tcaataaaag taaatttctc attatttaag gtaactatat
     9601 tatctaattg attttgtatt ttatttttca tattttatat ttcagatgat ttattaatct
     9661 aaaggccatc tgaaaactcc ccctttcatc aaatcttaca agccccgccc gcgcagccgt
     9721 catcctgaat atcggtctgc gtatcgtccg caccgtcgcg ggtgttatgg tagtacaggg
     9781 ttttgacgcc gtatttgtag gcggtcagca ggtctttgag catttgtttc atagaaactt
     9841 tgccgccttc gaatttgccc gggtcgtagg cggtattggc ggaaatcgat tgatcgacga
     9901 atttttgcat cacgccgaca agtttcaggt agccttcgtt gccgggaagc tgccacaggg
     9961 tttcataggc atttttcagg gtttcaaact ccggcacgac ttgtttcaaa atgccgtctt
    10021 tcgatgcttt gaccgttacc aatccgcgcg gcggctcgat gccgttggtg gcgttggcga
    10081 tttgagagct ggtttcagac ggcatgagcg cggtcagagt agagttgcgc aggccgtatt
    10141 tgacgatttc ggcacgcagg ctttcccagt cgtaatgcaa aggctcgccg cagacggcat
    10201 ccaaatcttt tttgtaggtg tcgatgggca gtttgccttg cgaataaacg gtttggttaa
    10261 agagcgtaca cgcaccgtat tctttggcaa ggtttgccga tgctttgagc aggtaatact
    10321 gtatggcttc aaaggtacgg tgggtcagac cgagcgcgga gccgtcgctg tagcggacac
    10381 cgtttttcgc cagataataa gcatagttaa tcacgccgat accgagcgaa cggcggccca
    10441 tagtggaggt acgcgcggct tctaccggat atccctgata atctaaaagt gcatcgagtg
    10501 cgcgcacagt caaatcggca agcccttcca attcgtccag gctgtttaat gcgcccaagt
    10561 tgaaggcgga cagggtacac agggcgattt cgccgttcgg atcgttgata ttgtccagcg
    10621 gtttggtcgg cagggcgatt tccatacaca agttggactg atgaacaggc gcgacgcgcg
    10681 gatcgaacgg gctgtgcgta ttgcagtgat cgacgttttg aatgtagatg cgcccggttc
    10741 cggcacgctc ctgcatcagc gtggaaaaca ggtcggcagc cggaatgatg cgcttgcgga
    10801 tatcagggtc ttgctcgtat ttcgtataga gccgctcaaa ttcgtcttgg tcggcaaaaa
    10861 acgcttcgta caatcccgga acctcgttgg gcgaaaacag cgtaatgttg ccgcccttaa
    10921 tcaggcgggt gtacagtagg cggttgattt gcacaccgta atcaagctgg cggatacggt
    10981 tgtcttccac gccccggttg tttttcaaca ccagcaggct ttcggcttcg atatgccaca
    11041 aggggtagaa caaggttgcc gcgccgccgc gcacgccgcc ttgcgaacag gatttgaccg
    11101 ccgcctgaaa cattttgaaa aacgggatgc agccggtatg ccgcgcttcg ccgccccgga
    11161 tttcgctgtc caaaccgcgg atacgtccgg cattgatgcc gatgcccgca cgctgggaaa
    11221 cgtatttcac aatcgcgctg gtagtggcat tgatggaatc caaactatcg tcgcattcaa
    11281 tcagcacaca gcttgagaac tggcgcgtag gcgtacgcac gccgctcata atcggggtcg
    11341 gcagcgatac tttaaatgtg gaaacggcat cgtaaaaccg tttgacgtaa tcgaggcgtg
    11401 tttctttggg atatttgctg aaaagacaca tcgccaccag aacatataag aactgcggtg
    11461 tttcataaat ctggcgggta acgcggttct gtaccagata tttgccttcg agctgtttga
    11521 cagcggcata ggaaaaggac atatcgcgtt cgtggtcgat ataggcgttc agctcgtcaa
    11581 attcttcgcg gctgtaatcc tcaaggatat gcctgtcgta ttttgcggca tcggtaagtt
    11641 ttttaacgtg gtcgtaaagg tgcggcggct cgtactcgcc gtaggctatt ttacgcagat
    11701 ggaaaatcgc caaacgcgcg gcaaggtatt ggtagtccgg ggtatcttcc gaaattaaat
    11761 cggcagcggc tttgatgatg gtttcgtgga tgtcgtcggt gcggatgccg ttgtagaact
    11821 ggatgtgcga tttcaactcg acctgagata cggaaacatt ttccaatccg tccgccgccc
    11881 aagtgacgac acggtgaatc ttatccaaat caatggcttc taatcttccg tctcgtttgg
    11941 ttactttcaa atcagtcggt gtattcatcg cttcctcttc cactcttgat attcaagaca
    12001 cggtcttttc aaataaatta aggcagacaa tatagtggat ttttggcatt ttctccagtc
    12061 ttgacaacgg ttgtattttt cagtttcagg caatgcgcga taaaacccgc ctgtcgtatt
    12121 tttcctataa tatttgtttt atctgataat tctttaccga taaaaaacgg gtaaattttt
    12181 tgccttttga ccggctccgg ctacaaggcg gtgaaataag gattttccga cgaaaaagga
    12241 aagcttcctg ttttctgccc ctgcaaattg ttaaattttg caaagtatga ttttgccgcg
    12301 ccgccgccga caaattccat tttcttaccg attggaattt attattgaga ttaatgtgtt
    12361 atttgaatct gcatatcaaa cggcaagttt tgtcggctga atgagtctga aactgccgac
    12421 aatttgcccg ctccatcctt ccatcctata ctggaaggaa tgacaaactg aaaggatcgt
    12481 catgtctgtc aaaaagatgc ttgccatact gttgtctgca atattgggac tggtatcgac
    12541 aactgccgct gccggtacgt cagaacccgc ccaccgcgat accaaacata tccgcaaggc
    12601 aaacaagcag atgctgcacc ccgaatgcag gaaatatttg gaacgccgtg ccgcgtggta
    12661 ccgatcgcaa ggcaacgtgc aggaattgcg cgaaaacaaa aaggcgcgca aagcattcca
    12721 ctccctgcct tatgcggaac agaaaatcca atgccgggcg gcttatgagg ctttcgatga
    12781 tttcgacggc ggcagtttcc gccgttaatc ccatataaaa tatgccgtct gaacacaggt
    12841 tcagacggca ttttccatag atacaacaaa ctatccttac gccatttcgt ttgaggtcct
    12901 cccgttgccg cagccttaat atagtggatt aa
//
LOCUS       DAWKOX010000044        12813 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.044, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000044 DAWKOX010000000
VERSION     DAWKOX010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.044"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..325
                     /locus_tag="WJK78_000882"
     CDS             <1..325
                     /locus_tag="WJK78_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T cell stimulation protein TspA"
                     /protein_id="HEZ7597827.1"
                     /translation="TEITLETPDSNTSEADALPDFLKDGEEETVDWSIYLSEENIPNN
                     ADTGFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALA
                     QELGI"
     gene            complement(498..914)
                     /gene="gloA"
                     /locus_tag="WJK78_000883"
     CDS             complement(498..914)
                     /gene="gloA"
                     /locus_tag="WJK78_000883"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ7597828.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(939..2108)
                     /gene="lapB"
                     /locus_tag="WJK78_000884"
     CDS             complement(939..2108)
                     /gene="lapB"
                     /locus_tag="WJK78_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ7597829.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGKMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDDQTYQFEIAQFYCELAQAALFKSNFDVARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(2119..2433)
                     /locus_tag="WJK78_000885"
     CDS             complement(2119..2433)
                     /locus_tag="WJK78_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ7597830.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKVDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            2743..3741
                     /gene="ilvE"
                     /locus_tag="WJK78_000886"
     CDS             2743..3741
                     /gene="ilvE"
                     /locus_tag="WJK78_000886"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ7597831.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYSSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALIE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYSANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(3926..4711)
                     /gene="fabI"
                     /locus_tag="WJK78_000887"
     CDS             complement(3926..4711)
                     /gene="fabI"
                     /locus_tag="WJK78_000887"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ7597832.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELGSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(4866..5687)
                     /gene="dapD"
                     /locus_tag="WJK78_000888"
     CDS             complement(4866..5687)
                     /gene="dapD"
                     /locus_tag="WJK78_000888"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ7597833.1"
                     /translation="MSLQNIIETAFENRADINPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEILNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQASPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(5854..7497)
                     /gene="pgi"
                     /locus_tag="WJK78_000889"
     CDS             complement(5854..7497)
                     /gene="pgi"
                     /locus_tag="WJK78_000889"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ7597834.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALEFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHITVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            8007..9239
                     /gene="pilG"
                     /locus_tag="WJK78_000890"
     CDS             8007..9239
                     /gene="pilG"
                     /locus_tag="WJK78_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ7597835.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            9313..10173
                     /locus_tag="WJK78_000891"
     CDS             9313..10173
                     /locus_tag="WJK78_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ7597836.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            10175..10807
                     /locus_tag="WJK78_000892"
     CDS             10175..10807
                     /locus_tag="WJK78_000892"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ7597837.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHND"
     gene            10800..11009
                     /locus_tag="WJK78_000893"
     CDS             10800..11009
                     /locus_tag="WJK78_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ7597838.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDMAYR"
     gene            complement(11094..12770)
                     /gene="pilB"
                     /locus_tag="WJK78_000894"
     CDS             complement(11094..12770)
                     /gene="pilB"
                     /locus_tag="WJK78_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ7597839.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYKESQAGKEVLPILFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         2939 a         3558 c         3357 g         2959 t
ORIGIN      
        1 aacggaaatc actttggaaa cgcctgattc caacacctct gaggcagacg ctttgcccga
       61 cttcctgaaa gacggcgagg aggaaacggt agattggagc atctacctct cggaagaaaa
      121 tatcccaaat aatgcagata ccggtttccc ttcggaatct gtaggttctg acgcgccttc
      181 cgaagcgaaa tacgaccttg ccgaaatgta tctcgaaatc ggcgaccgcg atgccgctgc
      241 cgagacagtg cagaaattgc tggaagaagc ggaaggcgac gtactcaaac gtgcccaagc
      301 attggcgcag gaattgggta tttgattccc aactgccctt tcgcagatca aggatgccgt
      361 ttcagacggc atcttttttt gccttatcgg tgtaacggat aaagtttgaa ccggcacagg
      421 ctcaaacagc aggtcgacgg caacaaaatg ccgtctgaaa cccctaaagg cttcagacgg
      481 cattggcggc ggcggtatca ggcagtttga taggcaaccg aatcgtcgcc gcttttcttt
      541 tgaatgaact cgattttgta tccgtcgggg tcttcgacga aggctatcac ggttgtgccg
      601 tgtttcatcg ggccggcttc gcggacgacg tttccgccct gccgcttcac acgttcgcag
      661 gcttcgtagg catcgtccac ttcaaccgcg atgtgtccgt aggcgttgcc caagtcgtat
      721 cgttccgtat cccagttgtg cgtcagttcc aaaaccgtgc tgtcggtttc atcgccgtaa
      781 ccgacgaagg caagggtaaa tctgccttcg ggataatctt ttcggcggag cagtttcata
      841 cccaaaacgt tttggtagaa atcgagggat ttttcgagat tgcccacgcg gagcatagta
      901 tggagtaagc gcattttttg tgttcctttc ggtggtggtt aaacttcgat tttattcggg
      961 gtaaacgtct gccatttgtt gcaggcgggg cagtgccaga aaaagacttg tgatttgaag
     1021 tggcagtttc ggcaccggta catcacgctg cgctgtagct gccgtccgat aaccgaacgc
     1081 atcatatcgg catcggcttt ccaagccgga tccaaatcgc tgagtttcaa accaagcagg
     1141 cggtacacgc cgttgaggtc gggcttgcgg cggacaagct cgacggcggt ttgcgcggct
     1201 tctttctcgc acttaagcag cagggatttc tcgtacacga cattgatcag gtcaagttcg
     1261 ggaaacgtct gcatatatcc tgtcagacgg ttcaagcctt cttcaggttt tccctgcgcg
     1321 gcataggctt cgtaaagctt ctcgccgacc atgctcaagt atgcatggtt ttgctgctcg
     1381 atggcggcat aggcttcgac ggcggcaggg aaattgcctt gtcggtgttc gatgtcgccc
     1441 aaaatcatgt tggcacgggt gcattttttg ttggcttcga gtgccttgcc gacattgaaa
     1501 cgcgcgacat cgaaattgga cttgaacagc gcggcttggg caagttcgca ataaaactgg
     1561 gcgatttcaa actgataggt ctgatcgtca tggctgagca gccgggcggt ttcaaccgct
     1621 ttttcccaat ccctgtcctg ttggtagata ttgagcaggt gctgtctggc ttcacgcgcc
     1681 attttaccgt cttgcagccc caaaaaaatc tgttcggcac gatcgaccaa ccccgcactt
     1741 tggtagtttt gcgccaattc aaacaggacg cgcgcgcgct tttcgccgac cgtatcggga
     1801 gaatcgagca ttgtccggtg tatgttgatg gctttgtcgt tttcgccacg ctgacggtaa
     1861 agcttgccta gggtgaggtt taggtcgtat gactgaggct gctgatcaat gacctctgcc
     1921 aattccctgg cggcacgtcc gctgttgcgg tcaaccaagg catccagact tttataaaat
     1981 cccgacggta tgctttttgc ctgctttaat acagtcttca tatccacacg ggcggcaaac
     2041 cagcccatcg cgaagaaaac gggcaaaagg ataatcggca gcaggataat ccacaattca
     2101 ttgtccatat cggctttctc aaggctgttt ggcagattcg ggcgcatttt gcgccggtgg
     2161 tgcggtcagc tctttccccg tcaaacgcgc atttttcttt acttcggcac gcaacctgcc
     2221 gttctcgcca cgtaacgaca acaaccgtcc gaacaaggca aacattccga acacgatgcc
     2281 gacgacaaac gcgccgaaca atacgacaat cagcggcaaa tcgactttct gtccgggcag
     2341 gtaggagaag gtaacggcat ccgtattaat gacggcaagc agcaggaaga gcagcaggat
     2401 aatgattttg atgacggtat agataagttt catgtttgct ccgtaaataa aaacgccgcc
     2461 cggacagctt cgcactctga accaagattg cgctagttta aacgatttgc acggtttcgg
     2521 ataggatgcg gcagcgtgtt cggacgacat acggagtatg cgattgccga caattttacc
     2581 aaatacaccg ttcctttcca tttgaaaaat aacggattgg acaccgcatc gacagaaaaa
     2641 cccgccgcgc acttgtcaaa accctgtttg caggcgtatc tttacaatct tcaaattcaa
     2701 accgttcatt gaaacatatc agaataagaa aggctttaca tcatgagcag acccgtaccc
     2761 gccgtattcg gcagcgtttt tcacagtcaa atgcccgtcc tcgcctaccg cgaaggcaaa
     2821 tggcagccga ccgaatggca atcttcccaa gacctctccc tcgcaccggg tgcgcacgcc
     2881 ctgcactaca gcagcgaatg tttcgaggga ctgaaagcct tccgtcaggc agacggcaaa
     2941 atcgtactgt tccgtccgac tgccaacatc gcgcgtatgc ggcaaagtgc ggacattttg
     3001 cacctgccgc gccccgaaac ccaagcctat ctcgacgcgc taatcgaatt ggtcaaacgc
     3061 gccgccgatg aaattcccga tgcgcctgcc gccctgtacc tgcgtccgac cttaatcggt
     3121 accgatcccg tcatcggcaa ggccggttct ccttccgaaa ccgccctgct gtatattttg
     3181 gcttcccccg tcggcgacta tttcaaagtc ggctcgcccg tcaaaatttt agtggaaacc
     3241 gaacacatcc gctgcgcccc gcatatgggc cgcgtcaaat gcggcggcaa ctacgcttcc
     3301 gccatgcact gggtgctgaa ggcgaaagcc gaatacagcg caaaccaagt cctcttctgc
     3361 ccgaacggcg acgtgcagga aaccggcgcg tccaacttta tcctgattaa cggcgatgaa
     3421 atcattacca aaccgctgac cgacgaattt ttgcacggcg taacccgcga ttccgtactg
     3481 acggttgcca aagatttggg ctataccgtc agcgaacgca atttcacggt tgacgaactc
     3541 aaagctgcgg tggaaaacgg tgcggaggcg attctgaccg gtacggcagc cgtcatctcg
     3601 cccgttactt ccttcgtcat cggcggcaaa gaaatcgaag tgaaaagcca agaacgcggc
     3661 tatgccatcc gtaaggcgat taccgacatc cagtatggtt tggcggaaga caaatacggc
     3721 tggctggttg aagtgtgctg atgctttaaa taaaaaaatg ccgtctgaaa cccgtttggc
     3781 gtttcagacg gcattttcgc gttcggacca tttccgctgc acctgcagca agtcgggcat
     3841 ttccctagaa atacgcttca gacggcaaac cgccgcccga aaccgatacg cggtacggac
     3901 ggcgcacgga tttgaaaacg gcggattatc cctcggtgct caaggcatta atgctgtaac
     3961 cgccgtcaac gtaagtgatt tcgccggtaa tgccggacga caggtcggac agcaggaagg
     4021 cggcggtatt gccgacttct tcaatggtaa cgttgcggcg cagcggattg tgggcggcga
     4081 cgtgtcccaa aagtttgccg aaatcggcga taccggaggc ggcaagcgtt ttaatcgggc
     4141 cggcggaaat gccgttgcag cggatgcctt ctttgcccag acaggcggcg gtaaaacgga
     4201 tgcccgcctc aaggctggct tttgccatac ccatcacgtt gtaatttgga atcgcgcgca
     4261 ccgcgcccaa gtagctcagg gcaacgatgg cggagtttct gccgcgcatc atcggacggg
     4321 cggcttttgc caatgcgggc aggctgtatg cggaaatttc gtgtgcggtg ttgaacgctt
     4381 cgcggctgat gctgtcgagg aagtcgccgc tcaaggcttc tttcggcgcg aagccgatgg
     4441 aatgcaccaa accgtccaag ccgtcccaat gtttgcccaa gtcggcgaac acttggttga
     4501 tttcgtcgtc gctggcgaca tcgcagcgga atacgagttc ggaacccaat tccgccgcca
     4561 ttttgcggac gcgctcttcc agtttgtcca caacgtaggt aaacgccagt tccgcgcctt
     4621 gttcgcggca ggctttggcg atgccataag cgatggaacg ctcggaaatc atgccggtaa
     4681 tcagaatttt tttgccttgc agaaaaccca ttttgtatcc ttcaaatagt gttcggttca
     4741 ttctaaaccg ttgattatag caaattgtcc ctgtttctgt gttttcacgt tgcagcatgc
     4801 aaacggcaat gccgtccgaa gcggatttca gacggcatcg gacgtttcaa atacggttta
     4861 aggcatcaga tgccgcgcaa caattcgttc acgctggttt tcgcacgggt ttgcgcgtcc
     4921 acgcgtttga cgatgacggc gcagtaaagg ctgtggctgc cgtctttgga aggcatactg
     4981 ccggacacga cgaccgaacc ggccggtacg cggccttggt agatttcgcc ggtggtgcgg
     5041 tcgaagattt tggtggattg accgatgaac acgcccatag aaatcacgct gccttcttcg
     5101 acaatcacgc cctcaacgat ttcggaacgc gcaccgatga agcaattgtc ttcaataatg
     5161 gttgggctgg cttgcagggg ttcgagtacg ccgccgatgc cgacaccgcc gctcaagtgg
     5221 acgtttttgc cgatttgcgc gcaagagccg acggtcgccc aagtatcgac catcgcacct
     5281 tcgtcaacgt atgcgccgat gttgacgtaa gacggcatca gcacgacatt tttcgccaca
     5341 aagctgccgc gtcgggcaac cgcacccgga acggcgcgga agcctgcgtt tttgaactcg
     5401 tcttcagacc agtcggcaaa cttggtcggc actttgtcga agtatttgtt cacaccgtcg
     5461 ttgaggattt cgttgtcttg gatgcggaag gacagcaaca cggctttttt cgcccattcg
     5521 ttaactttcc attcgcccac gcccaagcgt tcggcgacgc gcagtttgcc ggaatcgagt
     5581 tggcggatgg tttccaacac ggcttcttta acttcgggag taacggtggt cggattaatg
     5641 tccgcgcggt tttcaaaggc ggtttcgata atgttttgca aagacataat gtttccttat
     5701 gtgagatgtt tcgtgggacg cttgccggta ttttcaagca gtatgttcat ttgaaatgaa
     5761 tgcgctattg tgccacgcaa acgcatattc gtcagcaata cgcgggcggt tgccgaacat
     5821 tggcgtttcg gaatcgggcg ggcggcagta cctttatgcc gcaccgccgc ctttcagacg
     5881 gcattcgcgg taaaacgcca tcagcccttc ggtcgaggca tcgtgtacgg acgtgccgcc
     5941 ttccagttcg ccgatgatgg tttttgccaa ctgtttgccg tattccaccc cccactgatc
     6001 gaaggggttg acgttccata tcgcgccttg gacgaaggtt ttgtgttcgt aagccgccat
     6061 cagcataccc aaattgtagg gcgtgaggcg gtcgagcagg atgctgttgc tggggcggtt
     6121 gccagggaac tctttgtgcg gcgcgaggcg ttcgcgttcc gcttcgggca aatctgccag
     6181 ttcggcgcgt gcttcgtcca aggttttgcc cttcatcagg gcttccgctt gggcaaaggc
     6241 gttggcaacg gtaaaacggc tgcgtccgtc ctccacgccc tgcgccgtca tcgggacgat
     6301 aaagtcgcag ggaatcaggc gcgtgccttg atggagcagt tggaaatagg cgtgctggca
     6361 gttgacccct tcaccgccga acacgatgcc gcccgttttg cacacggcgg gactgccgtc
     6421 tgaagcgcgg cttttgccca aactctccat atcgagctgg ttcagccaca ccggcagcag
     6481 gcgcaggttg tggctgtacg gaacggcggt ctgcccgtcc gcgtgttgga aattgttata
     6541 ccacacggca atcagtgcca tcagaacggg aatgttgcgg cgcggcggcg tgtggaaaaa
     6601 atggctgtcc atcgcgtgcg cccccgccaa caactcgcgg aaacgcgccc cgccgaccgc
     6661 aaccatcacg ggcaaaccga cgggcgacca gacggaatag cgtccgccca cccagtcgta
     6721 catcgcaaac acgcgttccg ccgcgatacc aaaagccgca gctgccgcag tgtcggcaga
     6781 caccgcgcaa aaatggcacg ccgtttcgga ttccgagaac cccgcaccgc gataccacgc
     6841 cttgactgcc tgtgcattga gcagggtttc cggtgttttg aaggacttgc tggcaacgca
     6901 aaacactgtc gtttcggggt tcagacggca taaaaccgca tccaggcagg caggatcggc
     6961 gttggcggca aaatggacgg tgatatgccg tctgaacggc tcaagtgcct gcacgcacat
     7021 tgccggcccg aggtcggatc cgcctatgcc gatgtggaca aaatccgtaa tccgttttcc
     7081 ggttgtcccc tgatacgaac cgtcgtccaa actgtgtgca aactccaacg cacgatttaa
     7141 ctcgcggcgg atttcgggca acacgtccct gccgtccgca taaacggcat ccgcaccgtc
     7201 gggtaggcgc aaagccgtat gcagcgcggc acgcccctcg ctgccgttga ctttcgcacc
     7261 cgtccgcaaa gcacgcattt tcccttccaa atccgccgtc tccgcaagac ggcagagcag
     7321 ttgcagcgta tcttcgccca aacggttttt gctgtaatcg aacaacatcc cgtccaaacg
     7381 ctcatgcata cgctcaaaac ggtcgggttc gcaggcaaag cggtcgcgca aaaggacatg
     7441 acgcgtatcc tgataatggc gttcgagcgc ataccatgca cgggtaaaag cattcatctg
     7501 ttttccttga tttttcagaa ccggattaaa atgtagcaga atgtagttta acaaacggca
     7561 gcggctttgg cgaatctccg gaacaccgcc cgccgcgtcc aatagcacct tatttccata
     7621 tggcgaaaat atagtgaatt aacaaaaatc aggacaaggc ggcgagccgc aaacagtaca
     7681 aatagtacgg aaccgattca cttggtgctt cagcacctta gagaatcgtt ctctcttgag
     7741 ctaaggcgag ccaacgctgt accggttttt gttaattcac tataccctcc ggccggcatt
     7801 tgacccgcaa caatatcctg caagatttat tgtgtacgca taaatgccgg acagccgcct
     7861 aaataaggta taatcgcatc cgattctgtc ccgtttgccg cccgcaggcg ggatgtcggc
     7921 ggttttcatc ttaccgggaa cacgccggta ctgtttttta acgatgtttc ttacatttta
     7981 ttccaattac tttacggggc tagaatatgg ctaaaaacgg aggattttct ttgttcgcaa
     8041 agaaagaaaa acgctttatc tttgaaggca ggcattccgc ctccgacaaa ctggtcaacg
     8101 gcgaagtatc cgcgtttacc gaagaagagg cgcgcaaaaa actggcaaaa cgcggcatcc
     8161 gcccgttgca gattacccgt gtgaaaacaa gctccaagcg caaaatcaca caagaagaca
     8221 tcaccgtttt cacccgccag ctgtccacga tgattaaagc gggcctgccg ctgatgcagg
     8281 catttgaaat cgtggcgcgc ggacacggca acccgtctat gacggaaatg ctgatggaaa
     8341 tccgaggcga agtggaacag ggcagctcgt tgagccgcgc attctcaaac cacccaaaat
     8401 atttcgaccg cttctactgc aatctggttg cggcgggcga aacgggcggc gtattggaaa
     8461 gcctgctgga caaattggca atttacaaag aaaaaaccca ggccatccgc aaaaaggtaa
     8521 aaaccgcact gacctatccg gtatccgtca tcgccgtcgc catcggtttg gtattcgtga
     8581 tgatgatttt cgtactgccc gcctttaaag aagtttacgc caatatgggc gcggagcttc
     8641 ccgcactgac ccaaacagtg atggatatgt ccgacttttt cgtctcatac ggctggatgg
     8701 tgctgatcgc actgggcttt gccatatacg gcttccttaa attgaaggcg cgttcgatta
     8761 aaatccaacg gcgtatggat gccatactgc tgcgtatgcc gattttcgga gacattgtcc
     8821 gcaaagggac gattgcccgc tggggcagga cgacggcgac gctgattgcg gcaggcgtgc
     8881 ctttggtcga tgtattggac tccactgccg gcgcggcggg caatttaatc tatgaagaag
     8941 ccacccggga aatccgtacg cgcgtcatcc aaggtttgtc tatgacttcg gggatgcgtg
     9001 cgacggaact gttccccaat atgatgttgc agatgtcttc catcggcgag gaatcgggtt
     9061 ctttggacga tatgctcaac aaagccgccg aattttacga agacgaggtg gacaatgcgg
     9121 tcggcaggct gtccgctatg atggagccga tcattatcgt gattttaggc ttggtcatcg
     9181 gcacgcttct ggtcgccatg tatctgccgc tgtttaattt gggcaacgtg gtcgcctgat
     9241 ttgccgcaca gatccggcgc ggattcgctc tgcgccggtt tgtttttgtt ttgaatacat
     9301 tgagaacaaa atatgtctga tttgtctgta ttgtcgccgt ttgccgtgcc tttggcagcg
     9361 gtgttcgggc tgctggtcgg cagtttctta aacgtcgtca tttaccgcgt gccggtcatg
     9421 atggaacgcg gctggacggt atttgccaaa gaatatttaa acctgccgct gaccgaagag
     9481 gaaagccgta ccttcaacct gatgaaaccg gattcctgct gtcccaaatg ccgcgtgccg
     9541 atacgcgcgt ggcagaacat cccgattgtc agttacctgc tcctgcgcgg caaatgcgcc
     9601 tcctgtcaaa ccaaaatcag catacgttat cccttaatcg agctgctgac cggcgtattg
     9661 ttcgggctgg tcgcctggca atacggctgg tcttggatta cgctgggcgg attggtactg
     9721 accgcgtttc tgatttccct gacctttatc gatgcggaca cccaatacct gcccgactcg
     9781 atgacactgc ccttgatttg gctggggctg atatttaatt tggacggcgg cttcgtgcct
     9841 ttgcagtctg ccgttttagg tgcggttgcc ggctatggtt cgatatggct tttatgcgcg
     9901 gtatataaac tgattaaagg cgaaatcggt atgggcaacg gagatttcaa actgattgcc
     9961 gcattgggcg cgtggctcgg catatccgca ttgcccgtgc tgatttttgt ttcctcgctg
    10021 atcggtttgg tcgcggcaat cgttatgcgc gtcgccaagg ggcagcattt tgccttcggc
    10081 cccgcactga cagtttcggg ctggataatt tttacggcaa acgattccgt atggcgggcg
    10141 gtcaactggt ggctgaccca tccggtgctg taagatgacg gtatgggtcg gactgaccgg
    10201 cggaatcggc agcggcaaat cggcagccgc gcaatgtttt gccgatttgg gcgtgccgcg
    10261 catcgatgcg gacgcggcgg cgcactcgct gacggcttca gacggcatcg ccctgccgga
    10321 aatcaggcgg ctgttcggcg acaccgtttt cgacacacag ggtttgttgc gacgcgacat
    10381 attgcgtaaa gaagtctttg cctccccatc gcgaaaagcc ttgctcgaat ccgtgatgtt
    10441 gccgctgatt ttctcagaaa tcaaaaaaca gcaagaaacc tttaccgatg cggcttacgg
    10501 cattgtcgaa attccgctgc tgacggaaaa gcgtcaattt atcagcctga tacggcgtgt
    10561 cctgaccata agcgcacctt tggaaaaacg tatcggcagg gtgatggccc gcagcgggct
    10621 gacgcgcggc gaggtggcgg acatcatcag ccatcaggca tccgaatccg aacgcctgct
    10681 gcttgcagac gatgtgctgc tcaatgacgg cagcctcaaa agcctgcgtg agaaaacaat
    10741 gcgcctgcac gcgttttatt cagggatttt cgcctcaaaa ccaacacaag gaaaacacaa
    10801 tgactgaatc gcggcaaaca cgccttcaag tcaaatgtcc gacctgtcaa acagcagtag
    10861 tatgggaacc cgaaaacgca ttccgcccct tctgttcgca acgctgcaaa ctgatcgact
    10921 tgggcggatg ggcagacggg aaatatacgg tttccggcca aacggaaagt ttgccggaaa
    10981 tatccgaacc cgacatggca taccgctgac cgccccgcct tcccggcaaa caccctgaaa
    11041 gtcaaatgcc gtctgaaaca aacacgcttc agacggcatt ttcattctca aacctaatcg
    11101 ttggtatttg ccgttacctc ttccaatgaa gtaatgccct gcataacttt caaaataccg
    11161 gcccggcgca aatccaccat accctcctta taggcaacgt ccaaaatatc cacttccgta
    11221 ccgttgttca taatcacacg ctgcatttct tcgctgatgg gcataacctc atacacgccc
    11281 gcacgcccct tataaccctg cccccggcaa cggtcgcaac cgacggcgcg gtaaagtttc
    11341 caatcttttg caaggtcctc atcggtgaag ccgacttcct tcaaagcaga ggcagacggg
    11401 cgttccactt cctgtttgca gctcgaacac agcctgcgta aaagacgctg cgccataatc
    11461 aggctgaccg aactggcaat attaaacggc gcgacaccca tattcagcat acgcgacaac
    11521 gtcgccggcg cattattggt gtgcagggtg gaaaacacca tatgccctgt ttgtgccgcc
    11581 ttaatcgcaa tatcggcagt ttccaaatca cgaatctcac cgaccataat gatgtccggg
    11641 tcctgacgca ggaaagactt caaagcagcg gcaaaagtca ggccctgctt atcattgacg
    11701 ttaacctgat tgatgcccgg caggttaatc tcggcagggt cttccgccgt tgcaatattt
    11761 accgactccg tattcaaaat attcaaacag gtatagagcg acaccgtctt acccgaaccc
    11821 gtcggaccgg ttaccagcac catcccgtag ggacggtgaa tcgcttccaa caacaatttt
    11881 ttctgaaacg gctcaaaacc gagctggtcg atgttcaaag acgcggcatc ggaattcaaa
    11941 atccgcatca cgaccttttc gccaaacagc gtcggcaatg tgctgacacg gaaatcgaca
    12001 ggcttgccgc ccttttgaaa ggtcagctgc atcctgccgt cctgcggtat ccgtttttcg
    12061 gaaatgtcca aacgcgacat taccttaatc cgggaagcaa gctgccccct taccgcaatg
    12121 ggcggctgaa ccacctcgcg gagctgcccg tccacacgga aacggatacg ggcattgtgt
    12181 tcgtaaaact cgaaatggat gtccgatgcc ccgctgcgca aggcatccga caaagtctta
    12241 tggataaacc tcggaacagg gccgtcttct gcctcctcgt tgtcgatata cagggtgtgg
    12301 ctttcctctt cctcctgccc ctccccaagc tcctgaagca gcgatgtcga acgcgaaccc
    12361 acccaatcga gcaaacccgc caactggtca tcctcgacaa tgaccaactc aacctcaatc
    12421 cctgcggcag aaacggtttt ctgaatttgc ggcatctgtg tcggatcgga aaccgcaaaa
    12481 aatactttgt cgccccgacg gaaaaccggc acacagtgga actccaccat ctgctcctcc
    12541 gtcaacaccc ccatcagcac cctgtggcgc ggataatgac gcaaatcaag aatcgaataa
    12601 ctgaacaccc ttgcaatcaa tgccgcaagc gacttgggcg aaatgacgcc gtctgaaaac
    12661 agtatcggca acacttcctt acccgcctgc gactccttgt agtaatgctc ggcctgctca
    12721 acagtaacca cctggttttg aaccagaatc ctcagcaaac ctacgctcat acgaccttat
    12781 ccccaaattt attcattgtt atacctgtac agc
//
LOCUS       DAWKOX010000045        12261 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.045, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000045 DAWKOX010000000
VERSION     DAWKOX010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12261
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.045"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            248..985
                     /locus_tag="WJK78_000895"
     CDS             248..985
                     /locus_tag="WJK78_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ7597840.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKTRVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
     gene            987..1673
                     /locus_tag="WJK78_000896"
     CDS             987..1673
                     /locus_tag="WJK78_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7597841.1"
                     /translation="MADLTFQQAVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKAVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIIRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            1832..2695
                     /locus_tag="WJK78_000897"
     CDS             1832..2695
                     /locus_tag="WJK78_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597842.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAAKKE
                     IVFGTTVGDFGDMVKEQIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2758..3327)
                     /locus_tag="WJK78_000898"
     CDS             complement(2758..3327)
                     /locus_tag="WJK78_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ7597843.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSTEWQGMAD"
     gene            3485..4345
                     /locus_tag="WJK78_000899"
     CDS             3485..4345
                     /locus_tag="WJK78_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ7597844.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            4481..4819
                     /locus_tag="WJK78_000900"
     CDS             4481..4819
                     /locus_tag="WJK78_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597845.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRNNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5187..5540
                     /locus_tag="WJK78_000901"
     CDS             5187..5540
                     /locus_tag="WJK78_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ7597846.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAIWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5530..6396
                     /gene="atpB"
                     /locus_tag="WJK78_000902"
     CDS             5530..6396
                     /gene="atpB"
                     /locus_tag="WJK78_000902"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ7597847.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6453..6689
                     /gene="atpE"
                     /locus_tag="WJK78_000903"
     CDS             6453..6689
                     /gene="atpE"
                     /locus_tag="WJK78_000903"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ7597848.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6760..7230
                     /locus_tag="WJK78_000904"
     CDS             6760..7230
                     /locus_tag="WJK78_000904"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ7597849.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7235..7768
                     /locus_tag="WJK78_000905"
     CDS             7235..7768
                     /locus_tag="WJK78_000905"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ7597850.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAIIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7779..9326
                     /locus_tag="WJK78_000906"
     CDS             7779..9326
                     /locus_tag="WJK78_000906"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ7597851.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVSENEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9351..10226
                     /gene="atpG"
                     /locus_tag="WJK78_000907"
     CDS             9351..10226
                     /gene="atpG"
                     /locus_tag="WJK78_000907"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ7597852.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10264..11661
                     /gene="atpD"
                     /locus_tag="WJK78_000908"
     CDS             10264..11661
                     /gene="atpD"
                     /locus_tag="WJK78_000908"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ7597853.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11672..12094
                     /locus_tag="WJK78_000909"
     CDS             11672..12094
                     /locus_tag="WJK78_000909"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ7597854.1"
                     /translation="MSIMQVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         3034 a         3123 c         3146 g         2958 t
ORIGIN      
        1 gtttttcaat tatttgccgt tttggtgcga accgctgcct ttgcccgttt cagacggcat
       61 tgtccgaaat ggttgcccgc ttcctgcttt attgacaaaa aaatgctttc ccgataatat
      121 cctacgaaaa ttaacctgcc gatttgacac agcttgcggg cataacagct aaagcgttcc
      181 gacaatttca gctttatctt ccgcgcccgt tgtgtccgac atcgggcttt gttgtatgga
      241 aaagacaatg attattttgg acaaggtttc caagcattac caaacgcgcg acaagacccg
      301 ttttgccgcc gtcgagccga ccagcctcga aatccgcgac ggcgaaatct tcgggctgat
      361 gggttattcg ggtgcaggca aatccaccct gttgcgcctg attaacctgt tggaacgccc
      421 cgacagcggc aaggtcaacg tctgcggaca agagctgacc gcgcttgatg ccgccgcatt
      481 gcgtcaggcg cggcagaata tcggcatggt atttcaacag ttcaacctgt tgaacaaccg
      541 caccgtcgcc ggcaacgtcg ccttcccatt ggaaatcgcc ggatggccgt ctgaaaaaat
      601 caaaacgcgc gttgccgaat gcctcgaaat cgtcggactg accgaacgcg ccggccacta
      661 tcccgcccag ctttccggcg ggcagaaaca gcgtgtcggc atcgcccgcg cactcgcgcc
      721 caaaccccaa gtcatcctcg ccgacgaacc cacttccgcc ctcgaccccg ccaccacgcg
      781 cagcgtcttg gaatgtttgg aagacatcaa caaacgattc aacgtaacca tcgtcatcgt
      841 aacccacgaa atgagcgtca tcagacgact gtgcgaccgc gccgccctgt tggacaaagg
      901 caaagtcgtc gaaatcgtcg aagtacgcgg caaccaaatc cacgcccgat ccgacatcgg
      961 gcgcgaactg attcgggagg actgatatgg cagacttaac attccaacaa gccgtttcca
     1021 acatcatcgg tatgaaaggc gaaatcgtcc gcgcattggg cgaaaccttc gtgatggtcg
     1081 gcttgtccac cacattcgcc gtcgttttcg gcacgttgct gggcgtgttg ctcttcgtaa
     1141 cttccagccg ccaactgcat tacaacaagg cggtgaactt cctgctcgac aacctcgtca
     1201 acctcatgcg cgccttcccc ttcgtcattt tgatgattgc gatgataccc gccacacgcg
     1261 ccatcgtcgg cagcaccatc ggtccggttg ccgcctcgct ggtgttgagc gtgtcgggat
     1321 tgttttattt tgcccgtttg gtggaacaaa acctgcgcga agtccccaaa ggcgtgattg
     1381 aagccgccgc cgctatgggt gcgccgccgg ttgccatcat ccgcaaagtc ctcttaaacg
     1441 aagcgcgcgc gggcatggtt tccagcatta ccgtgcttgc catcgggctt ttgtcataca
     1501 gcgcggcggc agggatgata ggcggcggcg gcttgggcga cctcgccatc cgctacggct
     1561 actaccgcta ccaaaccgaa gtcatcgtct tcatcgtcgc cctcctcgtg ctgctggtca
     1621 tcctgattca aagcaccggc aacgcgttgg cgcggaaact cgacaaacgt tgaacccaaa
     1681 tgccgtctga acgccaaaac ccccaccgct atccgaaaaa tgctataaaa tccccctgtt
     1741 cgcggcaaat gccgtctgaa cgccgaatcc ggacggcagg actccctgcc cgtcattttt
     1801 gtttgaaact gccacaacat caggagaaaa tatgaaaacc ttcttcaaaa ccctttccgc
     1861 cgccgcactc gcgctcatcc tcgccgcctg cggcggtcaa aaagatagcg cgcccgccgc
     1921 atccgcttct gccgccgccg acaacggcgc ggcgaaaaaa gaaatcgtct tcggcacgac
     1981 cgtcggcgac ttcggcgata tggtcaaaga acaaatccaa cccgagctgg agaaaaaagg
     2041 ctacaccgtc aaactggtcg agtttaccga ctatgtgcgc ccgaatctgg cattggctga
     2101 gggcgagttg gacatcaacg tcttccaaca caaaccctat cttgacgact tcaaaaaaga
     2161 acacaatctg gacatcaccg aagtcttcca agtgccgacc gcgcctttgg gactgtaccc
     2221 gggcaagctg aaatcgctgg aagaagtcaa agacggcagc accgtatccg cgcccaacga
     2281 cccgtccaac ttcgcccgcg tcttggtgat gctcgacgaa ctgggttgga tcaaactcaa
     2341 agacggcatc aatccgctga ccgcatccaa agcggacatt gccgaaaacc tgaaaaacat
     2401 caaaatcgtc gagcttgaag ccgcgcaact gccgcgtagc cgcgccgacg tggattttgc
     2461 cgtcgtcaac ggcaactacg ccataagcag cggcatgaag ctgaccgaag ccctgttcca
     2521 agaaccgagc tttgcctatg tcaactggtc tgccgtcaaa accgccgaca aagacagcca
     2581 atggcttaaa gacgtaaccg aggcctataa ctccgacgcg ttcaaagcct acgcgcacaa
     2641 acgcttcgag ggctacaaat cccctgccgc atggaatgaa ggcgcagcca aataaggcag
     2701 tcgtataaaa tgatgccgtc tgaaccgcat tccgtgttca gacggcattt ttgtccttta
     2761 atccgccatt ccctgccatt ccgtcgaatc cggtgtatcg attccgaaca gcgacaaagc
     2821 gtgtgcaaca ctgtgcgcca ctatgtcgtc cgccgtctgc ggtttgcggt acatcgcagg
     2881 aacaggggga aacaccacgc cgcccatttc cgttacccgc ttcatattgt ccaaatgggc
     2941 aaggttcagc ggcgtttcgc gcaccatcag caccagccgc cgcctttcct tcaaaaccac
     3001 atccgccgca cgcgtcaaga ggttgtcgcc gaagccgtgc gcgaccgagg caagtgtccg
     3061 catcgaacag ggggcgacca gcatcccgtc cgttttaaac gtaccgctgg caatgcacgc
     3121 cccgatattg ccgatcggat gcacgaagtc cgccaaggca tatacctcgt ctctcgcata
     3181 agccgtttcc gaagcgcgcg ccatctccgc acctttcgat accacaaggt gcgtttcgat
     3241 atcttgcgcg cgtaaaagtt ccaaagcctt cacgccgtat tggaaaccgc tcgccccact
     3301 gatgccgatt atcaaacgcc gtaccatcat ccgcctttcc cataaaaccg cctgcaacgg
     3361 caaaccggct attatagtga aaaaacagaa atccgataaa tacggataca aattgtcggc
     3421 aacacccaat atccgataaa atatccgatt taacatccta tctgaatagg cacgggaggg
     3481 cggtatggca aaagtaaaag gcggattggg gcgcggtttg gattcgctgc tcgccaacgg
     3541 cgcagacaac agcagcggcg accgattgac cacggttgcg gttaaagata tccggcccgg
     3601 ccgctatcag gcgcgtgttc aaatcgatga cgaagccttg caggagctgg cagattcgat
     3661 taaggcgcaa ggcgtgatac agcccgtcat cgtgcgcgaa cacggactgt cccgatacga
     3721 actgattgcg ggggagcggc gttggcgtgc cgcacagatt gccggcctga ccgaaatccc
     3781 cgccgttatc aaaaccatca gcgacgaaac cgcgttggca atgggtttga tcgaaaacct
     3841 ccagcgcgaa aacctcaacc ccatcgaaga agcacaaggc ttgaaacgcc ttgccgacga
     3901 gttcgggctg acccacgaaa ccatcgccca agccgtcggt aaaagccgaa gcgcgatttc
     3961 caacagcctg cgccttttaa gcctgcccga acccgtgcag gaaatgcttt accaacgccg
     4021 cctcgaaatg gggcacgccc gcgcactgct gaccctgccc gtcgtcgaac agctcgaatt
     4081 ggcgcaaaag gctgtcaaaa acggctggtc ggtgcgcgaa gtcgaacgcc gcagccaagc
     4141 cgcccttcaa aacaaacgtc ccgagcccaa aaaaactgcc gccgccgaca tcggccgcct
     4201 gaatgatttg ctgactgaaa aactgggtgt caacgccgaa atcaaaaccg ccaaccataa
     4261 aaaaggcaga atcatcctgc atttcgacac gcccgaaacc ttcgaccata tcttgaagca
     4321 attgggcata gattaccgac cttaattttg cgggatatac cgtctgaaat atagagaata
     4381 gctttccaga ttttaagtgg gaaatataat tctattgaca ttttttctgc ttcacgtaag
     4441 aatcgttttc ctgttttcat ttttaatttt cgaggaaatt atgaacacac gcatcatcgt
     4501 ttcggctgcg ttcgttgcgt tggcattagc aggttgcggc tcaatcaata atgtaaccgt
     4561 ttccgaccag aaacttcagg aacgtgccgc gtttgccttg ggcgtcagcc caaatgccgt
     4621 aaaaatcagc aaccgcaaca atgaaggcat acgcatcaac tttaccgcaa ctgtgggtaa
     4681 gcgcgtgagc caatgctatg ttaccagtgt aatcagcaca atcggcgtta ccacttccga
     4741 tgcaatttgt ttgggaggcg gaacgcacaa aggcaaaagt caatgcaatg ctttgcttaa
     4801 agcggcaggc cgttgctaat cctttattcg gaaaaggtcg tctgaaaata ttttcagacg
     4861 atcttttatt tattgagcaa attccccaaa ctgccgacaa tccgaccgat aaactgctac
     4921 aatttcgcgt tgatttttta ttatttccac gtaaagcaaa caaatcacgt aagaacatta
     4981 aaaatgtaaa gaaattgcgg acaaactcct taatatcctg taattatatg taatgtgtgt
     5041 tagaatgaca cttgtcgccg ttattcaggc ggcgagcgcg gcggattggg atacgttgtt
     5101 tcacaaagat taactgtcgc ttgacgtaat aaggcttcta aattatatta gccgcgcccc
     5161 aaatccgagg cggaaacatt ccctttatga agcagattat catcctacaa tccgccgtat
     5221 tgtccatatg cgccgcagtt gcctttgctg tatggggttt tgccggattc ctttcggcgg
     5281 tcggtggcgg tttgtcctac ctgcttccca cgtttgttgc agttttactt ttaaaacttt
     5341 tcaggggaaa ccccttcctg caaagcagga tgttcgtctt cggagagatt ttaaaagtag
     5401 tgctgtcgct gttgtccatg cttgccgtat ttgcaatatg gcatcaatcg ctggtgttcg
     5461 ccccgtttct gatggggctg ctcggtgtca gccatttggt ttttttagta ttgttgagag
     5521 tgaaagatta tggcaggtga aaccattacc gctgccgact acatcaagca ccacttgcag
     5581 agcttgacca gtttgtcgga tgttactcag ggtcagggac tgaaaaacat tgctgatttt
     5641 tcgtttatta accttgatgc cgtctttttt gccgtcctgt tgggcgtaat cggcagcttt
     5701 ctgttgtggc gcggtgcgaa aaaagcaacg gcaggcgttc ccggacgttt ccaggctgcc
     5761 gtggaaatct tgtttgagtt tgtggacgat atgtgtaaga gcatcattca caacgaaaag
     5821 tctagaaaag ccgtcgcgcc gttgggtctg acgctgtttg tctggatttt tctgatgaac
     5881 gcgatggata tgctgccggt cgatttgctg ccgatggtat ggcagggcat taccggcaac
     5941 catcacgccc tgctgcgcgt cgtaccgact gccgatttga acaccacttt ggcactcgct
     6001 gtcggcgtgt tgctgatttg tatctattac aacatcaaaa tcaaaggatt gggcggctgg
     6061 tttcacgagt tgttcagcgc gccgttcggt gcaaaactcg cacctgcgaa ctttctgttg
     6121 aatttggtcg agtttctttc taaaaccgta tcccacggta tgcggttgtt cggcaatatg
     6181 tatgcgggcg aattggtatt cttgctgata gccttgcttg gcggtgcttg ggcggcttcc
     6241 ggcagcgtcg aagtcatgga tccgattctg tttgtattcc acattattgc cggtttggca
     6301 tgggcgattt tccatatttt ggtgattacc ctgcaggcgt ttattttcat ggcgttggcg
     6361 ttcgtctata tcggacaggc acatgatgcg cactgatttt cctaagtagt ttgtttttgt
     6421 agtttaacct ttgtttcttt aaggagttta aaatgggttt gattgctatc gcatgtggtt
     6481 tgatcgttgc attgggtgca ttgggtgcct ctatcggtat cgcaatggtc ggttctaaat
     6541 atttggagtc ttctgcccgt cagcccgaac tgatcggtcc gctgcaaacc aaactgttcc
     6601 tgattgccgg tttgattgat gccgcattct tgattggtgt cgccattgca ctgctgttcg
     6661 ccttcgttaa cccgtttgca ggtgcataat caggacggat tcgtccgttc cgtacaggcg
     6721 cagcctgttt gattaacccc agtacgaagg ttaagtaacg tgaatatcaa tgcaacatta
     6781 ttcgctcaaa tcatcgtctt tttcggtttg gtatggttta ccatgaaatt cgtgtggccg
     6841 ccgattgcaa aagctttgga tgagcgtgcc gcaaaagtcg ccgaaggctt ggctgccgcc
     6901 gagcgtggta aaagcgattt cgagcaggct gaaaaaaagg ttgcagaact cttggcagaa
     6961 gggcgtaatc aggtttccga aatggttgcc aacgccgaaa aacgtgccgc caaaattgtc
     7021 gaagaagcca aagaacaggc ttcttccgag gcggcgcgca ttgcagctca ggcaaaggcc
     7081 gatgtggagc aggaattgtt ccgcgcacgc gaatccctgc gcgagcaggt tgccgtgttg
     7141 gctgtcaaag gtgccgaatc tattttgcgc agcgaagtcg atgcttccaa acacgcaaaa
     7201 ctgctcgata ccctgaaaca ggagctgtaa tcttatggca gagttcgcaa cgattgccag
     7261 accttatgca aaggcattgt tcggtctggc tcaggaaaaa aaccaaattg agtcttggtt
     7321 gggcggactg gaaaaacttg cggcggttgt tcaggaaggg aaggtggctt cattgattga
     7381 ccgtcctgaa acgaatgctt cagaaaaagc agatatcctc atcgatttgg tcggtttgaa
     7441 agacaaggag ttgaaaaact ttgttatcgt cttggccggg cagaaacgtt tgtcgatatt
     7501 gccggaagta tatgctcaat atcaagactt gaccttatca ttcaaccata tcaaatctgc
     7561 catcatttac agtgcctatc cgttgaccga caaacaggtc ggcgagttgg cgcaaatgct
     7621 gaataagcgt ttcgacagcg agctgaaaat ctctgtcgaa atcgaaccgg agctgattgg
     7681 cggcataaaa gttgaagtgg gtgatcaggt tttggatttg tctgtacaag gcaaattgag
     7741 tgccttgtac acgactatga cgaattagga gagttttcat gcagcttaat cctgctgaaa
     7801 ttagcgattt gattaaagcc aagatcgaaa atctgtctgt aaatgccgaa gtgcgtactc
     7861 gtggtacggt gatttcggta actgacggta tcgttcgcat ccatggtttg tcagatgcaa
     7921 tgcaaggtga gatgctcgaa ttcccgggta acactttcgg cttggcgatg aacctggagc
     7981 gcgactccgt cggcgccgta gtgttgggcg agtacgaaca tattaaagaa ggcgacacgg
     8041 ttacctgtac cggtcgtatc ttggaagtgc cggtcgggcg cgaactggtc ggacgcgtcg
     8101 ttgatgcatt gggtcggcct atcgacggca aaggcccgat taatacaact ttgaccgccc
     8161 ctatcgaaaa aatcgcaccg ggtgtgattg cgcgtaaatc ggttgaccaa ccaatgcaaa
     8221 ccggcttgaa agccattgac tctatggttc cggttggtcg tggtcaacgt gagttgatca
     8281 ttggtgaccg tcaaaccggt aaaactgccg tagcactgga tgccatcgtt aaccaaaaag
     8341 gtacaggcgt aatctgtatt tatgtggcta tcggtcaaaa agcatcttct attgccaacg
     8401 tagtgcgcaa attggaagag catggcgcga tggaacatac tattgtagtt gctgcaactg
     8461 cttctgaagc cgctgcgctg caatatatcg ctccttactc cggttgtacc atgggcgaat
     8521 tcttccgtga ccgcggtgaa gatgcgttga tcgtatatga tgacttgtct aaacaagccg
     8581 ttgcataccg tcaaatttcc ctgctgctgc gccgtcctcc tggtcgtgaa gcatatcctg
     8641 gcgatgtatt ctacctgcac tcccgtctgt tggaacgtgc ggcccgtgtc agcgaaaacg
     8701 aagttgaaaa actgaccaat ggcgaagtaa aaggcaaaac cggttctctg actgcattgc
     8761 cgattattga aacccaagcc ggtgacgtat cggcattcgt accaaccaac gtaatttcga
     8821 ttacagacgg ccaaatcttc ttggaaaccg acttgttcaa cgccggtatc cgtcctgcaa
     8881 tcaatgccgg tatttccgta tcgcgcgtag gtggtgcagc acaaaccaaa gtcatcaaaa
     8941 aactgggtgg cggtatccgt ttggcgttgg cgcaatatcg tgaattggcg gctttctcgc
     9001 aatttgcatc cgatttggat gaagctacgc gcaaacaatt ggagcatggc gaagtcgtaa
     9061 ccgaactgat gaaacagaaa cagttcagta cgttgaatac ggctgaaatg gctttgaccc
     9121 tttgggcaat caacaacggt tcgtattctg atgttccggt tgccaaagct ctggcttttg
     9181 aatctgaatt tttgagcttt gtccgtaccc aacatccgga agttttggaa gccgtcaatg
     9241 cttcaggtgc aatgtccgac gagagcgaga aaacgcttga agcagccatg aaatccttca
     9301 aatcttctta cgcctatcag gcataaggct tgaagtgaaa ggagtctgaa atggcagtag
     9361 gaaaagagat tctcaccaaa atccgcagtg ttcagaatac ccaaaagatc actaaagcga
     9421 tgcagatggt gtcaacctct aaaatgcgga agactcagga acggatgcgt ttggcgcgtc
     9481 cgtatgccga aaaagtgcgt atggtgatga gccatcttgc gcaaaccaat accgatcatg
     9541 gtattccgtt actggaatct catcgggaaa tcagacgtgt cggttttatt ttgattacgt
     9601 ctgataaggg tttgtgtggc ggtttgaacg ccaacgtgct gaaaaagttt ttggcacaag
     9661 ttcaagagta tcggaatcaa ggtattgaag aggaaatcgt atgccttggc agtaaaggtc
     9721 tgatggcgtg tcagagcatt ggtctgaatg tggttgccag tgccgtaaat ttgggcgata
     9781 ccccaaaaat ggaaatgctg ctcggacctt tgacagaact cttccaacgg tatgagaaac
     9841 atgaaattga cagaatccat ctggtgtatt cgggttttgt caataccatg cgtcaagaac
     9901 cgagaatgga agtattgctg cctatcggtg agaacgtgat tggcgattca gctcccaaat
     9961 caccgttcag ctgggaatac cgctacgaac cgactgcact tgcagtgttg gaatatctgg
    10021 ttcgccgcta tttagagtct gtggtttatc aggcgttgag cgacaatatg gcatccgaac
    10081 aggcagcccg catggttgcc atgaaagctg caacagacaa tgcaggcaat gccatcaaag
    10141 agttgcgttt ggtatataac aaatcgcgtc aagctgcgat taccacggaa ttgtcagaaa
    10201 ttgtagcagg tgcggcggct gtctgatgcc gtctgaatcc tgtacggaaa ttaggatacg
    10261 ataatgagcc aaggcaaaat cgtacaaatt atcggtgcgg ttgttgacgt ggaatttcca
    10321 cgcgacatga ttccgcgcgt ttacgacgct ttgaaattag acgaaaacgg tctgactttg
    10381 gaagtccaac agcttttggg cgacggcgta gtccgtacca ttgcgatggg cagctcggac
    10441 ggtttgaaac gcggcatgac tgtgagcaat accggtgcgc ccattactgt gccggtaggt
    10501 aaaggtacgt tgggacgcat tgtcgatgta ttgggaacgc ctgttgacga ggcaggtccg
    10561 atcgataccg acaagagtcg tgccatccac caagccgctc ctaagtttga cgaactgtct
    10621 tccacaaccg aattgctcga aacgggcatt aaagtgattg acttgctgtg tccgtttgcc
    10681 aaaggcggta aagtaggtct gttcggcggt gccggtgtgg gtaaaaccgt gaacatgatg
    10741 gaattgatca acaacatcgc caaagcgcac agcggcttgt ccgtgttcgc aggcgtgggt
    10801 gagcgtaccc gcgaaggtaa cgacttctac cacgagatga aagattccaa cgtattggat
    10861 aaagtggcaa tggtttacgg tcagatgaac gaacctccgg gcaaccgttt gcgcgtcgca
    10921 ttgaccggtt tgaccatggc ggaatacttc cgtgacgaaa aagacgaaaa cggcaaaggc
    10981 cgcgacgtat tgttcttcgt ggacaacatc taccgttaca ctctagctgg taccgaagta
    11041 tccgcattgt tgggccgtat gccgtctgca gtgggctacc aaccgacatt ggcagaagaa
    11101 atgggtcgtt tgcaggagcg tattacctct acccaaaccg gttctattac ttctatccaa
    11161 gccgtatatg tacctgcgga cgacttgacc gacccgtctc cggcaacaac gttcgcccac
    11221 ttggacgcaa ccgtcgtatt gagccgcgat attgcctctt tgggtattta cccggcagtc
    11281 gatccgcttg attccacttc gcgccaactg gatccgatgg tcttgggtca agagcactac
    11341 gacgtggcgc gcggcgtaca gtccaccctg cagaaataca aagaattgcg cgacatcatc
    11401 gccatcttgg gtatggacga attgtctgac gaagacaaac tgaccgtaat gcgtgcgcgt
    11461 aaaatccaac gcttcctgtc ccaaccgttc cacgttgccg aagtgtttac aggttctccg
    11521 ggcaaatatg tcgccctgcg cgataccatt gccggcttca aagccatctt gaacggcgaa
    11581 tacgatcatc tgcccgagca ggcattctat atggtcggca gcattgaaga agcggttgag
    11641 aaagcgaaaa ccttaaactg aggaggtcgg catgagcatc atgcaagttg aggtggtaag
    11701 tagcgagcag aaaatctatt caggcgaggc aacatttatc gttgttccga ctgtacaggg
    11761 cgaactcggt atttatccgc gacacgagcc gattatgagt ttggtgcggc cgggggcttt
    11821 gcgtttgacc gttccgggcg aggataaaga ggttttggtt gctgtttccg gcggtgtttt
    11881 ggaagtacag cctgataaag taactgtctt ggcggatgtt gccgtccgca gtgcagagat
    11941 ggatcaggca cgtgcggaag aggcgaaaaa agccgcagaa gcgggcattt cccaagctaa
    12001 agacgataag gctttggcgg aggcgcataa agcattggct gctgcgattg cacagcttaa
    12061 aactttggac tatatccgtt cgcacaagaa ataaacttgt ttggtttgga aaagcacgac
    12121 cgtttggtcg tgctttttat tttccggatt taaattaaag actgtgtttg gatatggcgt
    12181 tggcaggcat agcctgcttt aaggtattca atagggcagc ctgccgccta accgaaacat
    12241 atagcggatt aacaaaaatc a
//
LOCUS       DAWKOX010000046        12125 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.046, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000046 DAWKOX010000000
VERSION     DAWKOX010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12125
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.046"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            14..285
                     /locus_tag="WJK78_000910"
                     /pseudo
     CDS             14..285
                     /locus_tag="WJK78_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            325..1359
                     /locus_tag="WJK78_000911"
     CDS             325..1359
                     /locus_tag="WJK78_000911"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ7597855.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            1565..2146
                     /locus_tag="WJK78_000912"
     CDS             1565..2146
                     /locus_tag="WJK78_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ7597856.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            2215..2397
                     /locus_tag="WJK78_000913"
     CDS             2215..2397
                     /locus_tag="WJK78_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ7597857.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARPLGEEELEA"
     gene            2394..3155
                     /gene="kdsB"
                     /locus_tag="WJK78_000914"
     CDS             2394..3155
                     /gene="kdsB"
                     /locus_tag="WJK78_000914"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ7597858.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMRVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            3178..3495
                     /locus_tag="WJK78_000915"
                     /pseudo
     CDS             3178..3495
                     /locus_tag="WJK78_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            3600..3797
                     /locus_tag="WJK78_000916"
     CDS             3600..3797
                     /locus_tag="WJK78_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597859.1"
                     /translation="MAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDAAL
                     ARFPEDAWFQEIKQDAQKHFA"
     gene            3954..4046
                     /locus_tag="WJK78_000917"
     tRNA            3954..4046
                     /locus_tag="WJK78_000917"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3988..3990,aa:Ser,seq:gct)
     gene            4349..5134
                     /locus_tag="WJK78_000918"
     CDS             4349..5134
                     /locus_tag="WJK78_000918"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ7597860.1"
                     /translation="MSRIRQAFAALNGEKALIPYITVGDPDIGATLAIMHSMVENGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAVVGALVKELKDAVR"
     gene            5171..6043
                     /locus_tag="WJK78_000919"
     CDS             5171..6043
                     /locus_tag="WJK78_000919"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ7597861.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPIDPLKFKDSKKYPDRLGAA
                     RKLTGEDDALVVMKGMMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(6103..6714)
                     /locus_tag="WJK78_000920"
     CDS             complement(6103..6714)
                     /locus_tag="WJK78_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HEZ7597862.1"
                     /translation="MRRTALLLLALAAGTSLATSFSQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIIPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSMKPHNK"
     gene            6823..7047
                     /locus_tag="WJK78_000921"
     CDS             6823..7047
                     /locus_tag="WJK78_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ7597863.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGVPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVQHK"
     gene            7048..7194
                     /locus_tag="WJK78_000922"
     CDS             7048..7194
                     /locus_tag="WJK78_000922"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597864.1"
                     /translation="MPSEMRMSRPTALFLNIVCAACRFKNKPSGVQCRHFGRIAADLF
                     RNGC"
     gene            7410..8444
                     /gene="pyrC"
                     /locus_tag="WJK78_000923"
     CDS             7410..8444
                     /gene="pyrC"
                     /locus_tag="WJK78_000923"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ7597865.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDNATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAVRLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENTDTITLVKQSQTVPASIPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(8810..9235)
                     /gene="nusB"
                     /locus_tag="WJK78_000924"
     CDS             complement(8810..9235)
                     /gene="nusB"
                     /locus_tag="WJK78_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ7597866.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(9313..9789)
                     /locus_tag="WJK78_000925"
     CDS             complement(9313..9789)
                     /locus_tag="WJK78_000925"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ7597867.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            complement(9837..10160)
                     /locus_tag="WJK78_000926"
     CDS             complement(9837..10160)
                     /locus_tag="WJK78_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ7597868.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNQPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADITKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            10327..11046
                     /gene="rnc"
                     /locus_tag="WJK78_000927"
     CDS             10327..11046
                     /gene="rnc"
                     /locus_tag="WJK78_000927"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ7597869.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            11094..12017
                     /gene="era"
                     /locus_tag="WJK78_000928"
     CDS             11094..12017
                     /gene="era"
                     /locus_tag="WJK78_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ7597870.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELIKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
BASE COUNT         2775 a         2917 c         3552 g         2881 t
ORIGIN      
        1 aagatactgg aaaatgaaag agatgaaacc tgtccgttat catattggcg atatgcccga
       61 gacttcaaaa caaaccgcct cccgtcatga cgacagggca gtgggtgttg acgatgattg
      121 ttttcatgat tcctttggtc aatttttgtt tgggtgttcg gcagaggcaa cccgaaccgc
      181 gccaatttct gtaaagcgca gttgcttatt tacctgattg gttcgcttat cggtttggtc
      241 ttcgcgttgt ttataggtgg gtctgtatcg ggtacgcatg attaatgccc cgggctgatt
      301 ttgcttcgag gatttgtatc gaatatgccg aattgtttca aatttcatac tgttatcgaa
      361 cggcattggc aaaaacctta tccggttttg tcttttctgc ttaagccgct ctccgggctg
      421 tttgccaaaa ttgcggcaaa acggcggacg gattttttat cgggaaaacg gcaaagcgaa
      481 aagctgcccg tgcctgtggt cgtggtcggc aatattcacg cgggtgggac ggggaaaacg
      541 ccgattgttg ccgcgctggt gtcgggtttg caggaaaagg gcgtcaaggt cggcatcatc
      601 agccggggct acgggcgcaa gagcaaggcg gttcatgtat tgaatgctga gagccgagcg
      661 gaagatgcgg gcgatgagcc tttgctgctg ttccgcaaaa ccggtgcgcc gacggcggtg
      721 ggcagcagcc gtgcagaggc aggcagggcg ttgctggcgg cgcatcccga catcggactg
      781 attgtggcgg acgacggttt gcagcattac gccctgcggc gagatgtgga aatcgcggtg
      841 tttccggcgg cggatacggg gcgcacggat ttggatttac tgcccaacgg cagtttgcgc
      901 gaacctttgt tgcggctgga ttcggtggat gcggtcgtcg tcagcggcgg caaggcggat
      961 gcgctgttta ggccgtctga aaatatgttt cacagccgta tcgaagcggg acggatttac
     1021 cgtttgaaca atccgtccga aatactggac acaggccgtc tgaaaaatca aaccgtcgtc
     1081 gccgtggcag gtattgccaa gccggcgcgt tttttcgatt cgttgcggaa tatgggcatt
     1141 accgtgaagc gaaccgtcgc gctgcccgac cacgccgaca tttcggcggc agatttgccc
     1201 gatgcggacg cggtcattat tacggagaaa gatgcggtca aattttcaga cggcatttgc
     1261 accgataatg tttgggtgtt gcccgtttgt gcgataatcg aacctgattt ggcggcgttt
     1321 gtgttggagc ggttggaaga tgtaccgaag gccgtctgaa agcacggttt gggcggagtg
     1381 attacggatt tgaataagaa cgcctcgcgc cgtcattccc gcgcaggcgg gaatctaagt
     1441 ctcgaatttt caggaatgcc taggaggctt cagaaatccc aaatctccgg atttccactt
     1501 ggacaggaat gagaaaatcg gtcgtatttt ttatctgcat taatcattcg ttaaagtatt
     1561 gaatattaaa ctgaaaacct tgttattgcc cttcgccacg ctggcattgt gcaccaacgc
     1621 ttttgccgcc ccgcctagcg acgcgtcgtt ggcgcgttgg ctggatacgc agaattttga
     1681 ccgggatata gaaaaaaata tgattgaggg ctttaatgcc ggatttaaac cgtatgcgga
     1741 caaagccctt gccgaaatgc cggaagcgaa aaaagatcag gcggcagaag cctttaaccg
     1801 ttatcgtgag aatgttttga aagatttgat tacgcccgaa gtgaaacagg ctgtccgtaa
     1861 tactttattg aagaatgccc gtgagatata cacgcaagaa gaaattgacg gcatgattgc
     1921 cttttacggt tcgcctgtcg gtcagtccgt cgttgccaaa aatccgcgct taatcaagaa
     1981 atcgatgagt gaaatagcag tatcttggac tgcattgtca gggaaaatcg cgcgacatca
     2041 tctgcccgcg tttacggaag agttgcggcg catcatctgc ggcggtaaaa atcccgatgc
     2101 gggctgtaaa caagccggac aggttgggaa aaggcatcag aaataaatga tagccgtctg
     2161 aaatattgaa gagggcatcc gattgattga accatcaaac ccgaaagcaa ccctatggaa
     2221 aaaaaattct tagacatcct cgtctgcccc gttaccaaag gcaggctgga atatcatcag
     2281 gacaaacagg aattgtggag ccgtcaggcg aagcttgcct atccgattaa agacggcatt
     2341 ccctatatgc tggaaaacga agcgcgtccg ttgggcgaag aggaactcga agcatgaccg
     2401 aattcgtcgt attgattccg gcgcggctgg attcgtcgcg cctgcccgga aaagccttgg
     2461 cggacatcca cggcaaaccg atggtcgtgc gcgttgccga acaggcggca aaaagtaaag
     2521 ctgtgcgcgt cgtcgttgcc accgaccatc ccgatattca gacggcctgt caggcgcacg
     2581 gcgtcgaagt cgtcatgact tcaaaccggc acgaaagcgg cacgacgcgc cttgccgaag
     2641 cctctgccgc gctgaagctg ccgccgcatc tggtggttgt caacgtacag ggcgacgagc
     2701 cgctgattgc acctgaactc atcgaccgca ccgccgaagt actcgtcgaa aacaacgtcc
     2761 aaatggcgac cgccgcccac gaattgcacg atttcgacga attgatgaat cccaatgccg
     2821 tcaaagttgt cctcgacaaa aaccgcaacg ccatctactt cagccgcgcc ccgattccct
     2881 atccgcgcga tgcgatgcgt gcaggaaaac gcgaaatgcc gtttgaaacc gccgtcctgc
     2941 gccatatcgg catctacgcc taccgcgtcg gcttcctgca acgctacacc gaaatgagag
     3001 tttcgccgct ggaaaccatt gaatcgctgg agcaactgcg tgtcctgtgg cacggctacc
     3061 cgattgccgt cgaaaccgcc aaagaagctc ctgccgccgg cgtagatacg caggaggatt
     3121 tggacaggat tcgcgctgta tttcagacta tataaaatag attcaaaggg aaaagatatg
     3181 cagcaacata ttgaaaaatg gcaacacttg agccgggaag aacagaaaat ccttgctgaa
     3241 gtatggggtc tcgtgcaaaa cgacgatcag gaggttcact atgaaatgct caaattgaac
     3301 gcacccgacg aagccagtgg cgaattttgg ttcagaatgg cagaaacact cagcaccctg
     3361 ccgcccaacc gttccctcga ccttagaatg aacggcggca ggctggcgac cgccgtatcc
     3421 atcctttccg tcatgattga agacaatccc gacataccgc agctttgggc gcaaaaaatt
     3481 accgcgctca attatagtgg attaaattta aaccagtacg gcgttgcctc gccttgtcgt
     3541 actatctgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactatatt
     3601 tggcacacgg acacaaagcc cgtgccgacg gtttggcaca acagcccgac aaagcggcag
     3661 aagccaacga ggaggaatac ctgaccaaag ccctgtcgca aaacctactg tcaacattgg
     3721 atgccgcgct tgcacgtttt cctgaagacg cgtggtttca ggaaatcaaa caggatgcac
     3781 aaaagcattt tgcttgagga tgtggcagtc aggaatattt ccattcagga agaaaagaag
     3841 tgcctgattg ggtataatca gggtaaatct tattttattt caaaagatta atatttgctt
     3901 tctgtttttc cttgacggta tcggaaaagt tgattatagt tacagcttcc ttaggagtaa
     3961 tggctgagag gctgaaggca cttccctgct aaggaagcat gtggggtcaa cctgcatcga
     4021 gggttcgaat ccctcttact ccgccaagat gagaagacgc tgtgttttac agcgtctttt
     4081 tttacgcgct ttgttgcgga agtgccgagg gctgtctgcc gtgcgccgcc tggatttgca
     4141 atgtgcccgc ccgtgcaaaa tccgatttga ccaacctgaa gggcaggttt cggaagagcg
     4201 gggaattttg ataaacaaaa aactgcacgg cataatcttt cccggttttc attttccgta
     4261 ttcgcctatc cgtaccgcaa atgctatact gggaaaaatt taccgattgt gttttacggc
     4321 atatttgccg ataggatgga agagacaaat gagcagaatc cggcaggctt ttgccgcttt
     4381 aaacggtgaa aaggcattga ttccttatat tacggttgga gacccggaca ttggggcgac
     4441 tttggcaata atgcacagta tggtggaaaa cggtgcggat attttggagt tgggcgtgcc
     4501 gttttccgat ccgatggcgg atggaccggt tattcagcgt gcggcggagc gggcgttggc
     4561 aaacgggatt tcgctgcgcg atgtcttgga tgtcgtcaga aaattccgtg aaaccgacac
     4621 gcaaacgccg gttgttttga tgggatattt gaaccctgta cataagatgg gttatcggga
     4681 gtttgctcag gaagccgcaa tggcgggtgt ggacggcgtg ttgacggtgg attcccctgt
     4741 cgaaaccatc gatccgctct atcgcgagct gaaggataac ggggtcgact gtattttcct
     4801 gattgcgccg acgacgacgg aagaccgtat taaaaccatt gccgagctgg caggcggatt
     4861 tgtctattat gtttcgctca agggcgtaac gggcgcggca agtttggata cggatgaggt
     4921 ttcgcgtaaa atagagtatt tgcatcagta tatcgatatt cccatcggtg tcggtttcgg
     4981 catcagcaat gcggaaagcg cgcgcaaaat cggccgggtt gccgacgcgg tcattgtcgg
     5041 cagccggatt gtgaaagaga ttgaaaacaa tgcgggcaac gaggctgcgg tcgtcggtgc
     5101 tttggtcaaa gagttgaagg atgccgtgcg ctgattctgt cacgcattct aaatatttta
     5161 ggagttgtcc atgagctggt tagataaaat cctgccaccc aaaatcaaaa accgcagcaa
     5221 agacggttct tccaatgttc ccgagggttt gtggcacaaa tgtccgtctt gttcggcaac
     5281 cgtttattcg accgagttgc agcagaacaa tcaggtttgt ccgaaatgca accaccacaa
     5341 tccgttgtcg gcacgacaac gcctgaacct gcttttggat gaggatggca gggaggaagt
     5401 tgccggaaat gtcaaaccga tagatccttt gaagtttaaa gacagtaaaa aatatcccga
     5461 ccgtttgggg gcggcacgca agctgaccgg ggaagatgac gcgctggtgg tgatgaaggg
     5521 gatgatgaac ggcctgcccg tcgtcgttgc tgcgtttgaa ttccgcttta tcggcggttc
     5581 gatgggttcg gttgtgggag agcgtttcgt acagggcgtc cgccgtgcgg ttgccgacaa
     5641 ttgtccgttc gtctgtgtgg cggcttccgg cggtgcgcgt atgcaggagg gtgtgaactc
     5701 gttgatgcag atgacgaaaa ccagtgccgc gctgcatttg ctgacggaaa aacgcctgcc
     5761 gtttatatcg gtattgaccg atccgactat gggcggcgta tccgccagct tcgcattttt
     5821 gggtgatgtt gtgcttgccg aaccgaacgc gctgatcggt tttgccggtc cgcgcgtgat
     5881 tgagcagacg gtgcgcgaaa cgctgccgga aggcttccaa cgcgccgagt tcctgctgga
     5941 aaaaggcgca atcgaccaga ttgtcgaccg ccgcgatatg aagcggcgca tcagtgattt
     6001 gattacgctg ttgtgccgtc aggacaaagt ttccgccgct tgatggctga tgaatcgaat
     6061 accgtctgaa accgatgttt cagacggtat ttttgtgtct ggttatttgt tgtgcggctt
     6121 catcgacggg gcatagcgtc cggcacgttc tttcaggcgt tgtaccaaac ctttcgtgtc
     6181 ggcgggtaca ccgccctcgc agaatgcctg atacaggacg gtgcgcagtg cgtcgttgcg
     6241 gcttaatgta ccgcctatcg gtttccattc ggcgtttcgg ggctgtatcc agcggcggtt
     6301 gaccgtgtcg ccgtagccga acactttata ggaggaaggt ttgccgttgc cgaacctgat
     6361 ggagaagcgg gcgcagaata tgccttcggc agtcaggttg tcgtagcctt tgtcggagcg
     6421 gatattgaga atgtagcgga tgctgccgtc gggcgcgggt ataatttgca ggctgtcgag
     6481 caggattttc ggctgtttgc cgtaattttc atccacataa atgtcaaacc agccgtccga
     6541 gtgcgtatcg ggcagcggcg gcagtttggc ggtatgttct ttaaattcgc gggcggcggc
     6601 ttcttcgggc gtttcgcggt agcgggtgtt gatcggcgtg tctttttggc tgaagctggt
     6661 ggcaagggac gtgccggcgg cgagtgcgag cagcaggagg gcggtgcggc gcataagttt
     6721 ctccaaattg aaaacggcgt tattttatgg gttggcaaag ggggctgcaa gcaactgggg
     6781 tataatctcc ccccgattcc cattttttaa acggtacaaa cgatgaacag cgaaacttta
     6841 gacgtaaccg gattgaaatg tcccctgccg attttgcggg cgaaaaaggc tttggcgcaa
     6901 atgcagcagg gcgacgtgtt gaccgttctg gcaaccgacg gcggcgtacc gggggatttt
     6961 gaggcttttt gccgccaaac cggtcatgtg ctgttggatg cttccgaaca ggacggcgtg
     7021 ttcacgctgg tcgtccaaca caaataaatg ccgtctgaaa tgcggatgtc ccgcccgacg
     7081 gcgttgtttt tgaatatcgt atgtgccgcg tgccgtttca aaaacaaacc gtccggcgtg
     7141 cagtgtcggc atttcgggcg tatcgccgcc gatttgttcc ggaatggctg ttaaccgcct
     7201 tgccgtcggc aaagaagcaa aacccaagca caatcaaaat ctaaaggctg tgtttgaaga
     7261 ttccgttgat gcaacccaat cagtcggaca aaatgccttt catccaatgg aaccggtttc
     7321 cgaccggacg gaataaccgg ctttcccccg gcaaacggat ggaatcgacc gggtattcaa
     7381 acgcagccaa aacctaaaaa ggaacaacca tgcaaaccct gaccattatc cgccccgacg
     7441 atatgcacct gcacctgcgc gacggcgacg cgctcaaagc cgttgctcct tataccgccc
     7501 gccaaatggg gcgcgccgtc atcatgccca acctcaaacc gcccgtcgtc agcgtagccg
     7561 atgcgcttgc ctacaaagcg cgtattatgg cggcgttgcc cgaaggcagc gcgtttgagc
     7621 cgctgatgac gctttatttg accgacaacg ccacgcccga actcgtgcgc gaagccaaag
     7681 ccgccggcat cgtcgccttc aaactctacc ctgccggcgc gaccaccaat tccgattccg
     7741 gcgtaaccga cctgttcaaa ctcatccccg ttttggaaga aatggcaaaa cagggcatcc
     7801 tgttcctcgt tcacggcgaa gtaactgacc ccgaaatcga catcttcgac cgcgaagccg
     7861 cctttatcgg gcgcgtgatg aaacccgttt tggcgcaagt gccgaatctt aaagtcgtgt
     7921 tcgaacacat caccaccgcc gaagccgtcc gccttgtttt ggaagcgggc gacaacgttg
     7981 ccgcctccgt gaccccgcaa cacctcctgc tcaaccgcaa cgacctcttg gtcggcggcg
     8041 tgcgccccca tcatttctgc ctgcccgtac tcaaacgcga aacccaccgt caggcattgg
     8101 ttgccgccgt taccggcgag aaggcgcata aattcttcct cggcaccgac tccgcgccgc
     8161 acgccaaatc cgccaaagaa aacgcctgcg gttgcgccgg tatgttcagc gcgatgaccg
     8221 ccatcgagct ttatgccgaa gtgtttgaaa aagcaggcgc gttggacaaa ctcgaagcct
     8281 tcgcctcgaa aaacggcgca aggttttacg gcattcctga aaataccgac acgatcaccc
     8341 tcgtcaaaca aagccaaacc gtccccgcaa gtattcccta cggcgacggc gaacttgtcc
     8401 cgatgcgcgc gggcggcgaa atcggctgga cggtacagta ttgatggggc tggaaacaaa
     8461 atgccgtctg aaaggttttt cagacggcat ttgtgttgtt gactgattga tacgtcaacg
     8521 gcgtttgagt ttgttacgtt tcggttattt ccgataaatt cccacaattt tcaaatttcg
     8581 ccattcccac gaaggcagga atccggaaat tcgatgcgac cagagtttat caaaaacggc
     8641 agcaactcaa aaaaccggat tcccgcctgc gcgggaatga cgagattgaa gtttcagaat
     8701 ttatttgaaa tacccaaaat tcaaaaaacc aaattcccac ctgcgtggga atgacgaaac
     8761 aaagaaagca gaaataagga catagaactt tctttaaatt tgtgatgcat caacggcgtt
     8821 tgggctcgtc gggacggatt tgggcggcga gtttgtcgag gatgccgttg acgaatttgt
     8881 gcccgtccgt gccgccgaag gttttggtta cttcgatggc ttcgttgatg atgacggggt
     8941 agggcgtttc gggcatggcg gacagctcgt ggcaggcggt cagcaggacg gcgcgttcga
     9001 tggggttgag gtctttttcg tcgcggtcga gcagggggcg gatttgtcgg atgtactctg
     9061 ccgcattggt ttgcgtgccg aagaaaagtt tgttgaacaa ttcttcgtct gccttggcaa
     9121 agtcgggcat ttcgcggatg tttttagcaa tctcgggcgc ggcggtgcgg ttgataaggg
     9181 attggtaaac ggcttgtacg gcaagctcgc gggaacggcg gcgggctgtt ttcatgattt
     9241 ttccttgaaa cggttgggcg gcacggtatg ccgtctgaaa cggaaagggc gtatcggtgt
     9301 acgccctgtt tgttattctt cgtcttcaaa ctgttcttcg agcaggaggt tgacgaggtt
     9361 ggcgcattct acggcgactt tggcggcatc cgaggctttt tcttcaatcc gttcgattgc
     9421 ctgtgcgtcg ttttccgtgg tcaggacggc attggcaatc gggatgttgt agtcgagtgc
     9481 gacgcggctg acccctgctc cggattcgtt ggaaaccagc tcgaaatggt aggtttcgcc
     9541 acggataacg acgccgatgg caatcagtgc gtcaaatttt tcagaagagg caaagttcat
     9601 cagcgcgatg gggatttcaa gcgcgccggg tacggtggcg acggtaatgt tttcgtctgc
     9661 cacgcccaat tcttggaggg tgcggcagca gactttgagc atttcgctgc cgatttcgtt
     9721 ggtgaagcgt gcctgtacga tgccgatgcg gaggtgtttg ccgtcgaggt tgggggcgat
     9781 ggtgttcatt gggtgtcctt tggtattcgg aggtttcgga atgccgtctg aaggttttag
     9841 tcttgcggct gccagtcggc gacggtttgg aatgtgccgt cttctgccaa ttcccacgcg
     9901 ctgccttcag gttgggagag cagtgcggcg gtttcagggt tggttttggt gatatcggcg
     9961 aggctgacga tgctgaagtt gtccgggtcg tcggtgtatt cgtcggtctc gtcgccgctg
    10021 aagaaacgcc agccgctgtc gttttcaaaa acgggggctt cgcggtagag gaagccgacg
    10081 ggctggtttt gtttggcgac ggtgttggtg gcgatgcagc ggtcgagtgc cgaggaaagt
    10141 gcttgtgcaa atgcgttcat tgcgggaata cgttggggga aaacttgcgg attttaccac
    10201 gattcttgcg ttgtcggcag acggcggcgg tttggtggta caatgtgcgc cgtttgcagc
    10261 cttaaggtgt ttctgtattt ttggagtatg gaaacgcatt cgggctgttt tttgcggaag
    10321 acggtaatga aagacgatgt tttgaaacag caggcacacg cggcgataca gaagagactg
    10381 ggctacgcgt tccgcgatat ttcgcttttg cggcaggctt tgacgcacag gagccatcat
    10441 gcgaagcaca acgagcggtt cgagtttgtc ggtgattcga ttttgaatta tacggtggcg
    10501 cggatgctgt ttgacacgtt tccgaagttg accgagggcg agttgtcgcg gttgcgggca
    10561 agtctggtca atgagggcgt gctggcggaa atggcggcgg aaatgaatgt cggcgacggt
    10621 ctgtacttgg gggcgggcga gttgaagagc ggcggcttca gacggccttc gatactggca
    10681 gacgcgatgg aggcgatgtt tgcggcggtc agcttcgatg ccgatttcaa cacggcggaa
    10741 aaggtggtgc gccatttgtt tgccgaccgc gtccggtgtg ccgatttcca aaatcaggca
    10801 aaagacggca aaactgcttt gcaggaggcg ttgcaggcac gccgctttgc tttgccgaaa
    10861 taccgtatcg aagagcaaat cggccatgcc aacgacagta tgtttgtggt ttcctgcgat
    10921 ttgggcgaac tgggtttcgt gtgccgtgcc aaagggacga gccgcaaggc ggcggaacag
    10981 gaggcggcga aagaggcttt gaaatggctg gaagagaagc tgccgctgaa gaagaaaaag
    11041 aaatgaggcg gcgcgtgaat atgccgtctg aacatatgga tacgaaagca aatatggata
    11101 ttgaaacctt ccttgcaggg gaacgcgccg ccggcggata ccgttgcggc ttcgtggcga
    11161 ttgtcggccg tccgaacgtg ggcaaatcaa cgctgatgaa ccatctcatc ggtcagaaga
    11221 tcagcatcac cagcaaaaag gcgcagacga cgcgcaaccg cgtaacgggg atttataccg
    11281 acgataccgc gcagttcgtg tttgtcgata cgcccggctt tcaaaccgac caccgcaacg
    11341 cgctcaacga caggctgaat caaaatgtta ccgaggcgct cggcggcgtg gatgtggtgg
    11401 ttttcgtcgt ggaggcgatg cgctttaccg atgccgaccg cgtcgtgttg aaacaactgc
    11461 ccaagcacac gccggtcatt ttagtggtca acaaaatcga caaggacaag gcgaaagacc
    11521 gttacgcgct ggaggcgttt gttgcccaag tgcgcgccga atttgaattt gcggcggcgg
    11581 aggcggtcag cgcgaaacac ggattgcgga ttgccaacct gttggagctg attaagccgt
    11641 atctgcccga aagcgtgccg atgtatcccg aagatatggt tacggacaaa tcggcgcgtt
    11701 ttttagcgat ggaaatcgtg cgtgaaaaac tcttccgcta tttgggcgag gaattgcctt
    11761 atgcgatgaa tgtcgaagtg gagcagtttg aagaggaaga cggtttgaac cgcatctaca
    11821 tcgccgtttt ggtcgataag gaaagccaaa aggcgatttt aatcggcaaa ggcggggagc
    11881 gtttgaagaa gatttccacc gaagcgcggt tggatatgga aaaactgttt gataccaaag
    11941 tatttttgaa ggtctgggtc aaagtcaaat ccggttgggc ggacgacatc cgcttcctgc
    12001 gcgagctggg tttgtagttt ttcttgctga actttacgca aatgccgtcc gaacaggttt
    12061 cagacggcat tttgtttcaa tcgggaatat ctttgttaaa aacgggttga tattatctgt
    12121 gcata
//
LOCUS       DAWKOX010000047        12058 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.047, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000047 DAWKOX010000000
VERSION     DAWKOX010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12058
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.047"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..816)
                     /gene="hslO"
                     /locus_tag="WJK78_000929"
     CDS             complement(<1..816)
                     /gene="hslO"
                     /locus_tag="WJK78_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ7597871.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGRGRLKMLVAEAASDRTVRATARWDET
                     AEIADDESLGDLLGEGGVFVLTLQPKDGEPWQGVVPLEGGGIAQMLANYMKRSEQIDT
                     HIVLSASDEAAGGLLVQRLPEAVLDEEAWEHVSTLARTLTADELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHS"
     gene            1061..1816
                     /locus_tag="WJK78_000930"
     CDS             1061..1816
                     /locus_tag="WJK78_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ7597872.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSISTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            1835..2053
                     /locus_tag="WJK78_000931"
     CDS             1835..2053
                     /locus_tag="WJK78_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597873.1"
                     /translation="MSMPEMPKWYDDDGQIVSCTEKVKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            2198..2542
                     /locus_tag="WJK78_000932"
     CDS             2198..2542
                     /locus_tag="WJK78_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ7597874.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            2542..3234
                     /locus_tag="WJK78_000933"
     CDS             2542..3234
                     /locus_tag="WJK78_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ7597875.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            3301..4521
                     /gene="argJ"
                     /locus_tag="WJK78_000934"
     CDS             3301..4521
                     /gene="argJ"
                     /locus_tag="WJK78_000934"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ7597876.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALVINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            4581..5990
                     /locus_tag="WJK78_000935"
     CDS             4581..5990
                     /locus_tag="WJK78_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ7597877.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFVFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLKPTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETAAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            6180..7571
                     /gene="hrpA"
                     /locus_tag="WJK78_000936"
     CDS             6180..7571
                     /gene="hrpA"
                     /locus_tag="WJK78_000936"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ7597878.1"
                     /translation="MFPDFSQPLSKDRHFLQSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKAIAEHQVTIICGETGSGKTTQLPKICLELGRG
                     VAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKQRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRISAGV
                     CIRLFSEEDFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            7672..8799
                     /locus_tag="WJK78_000937"
     CDS             7672..8799
                     /locus_tag="WJK78_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597879.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKIATEPPSALRENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            8977..10554
                     /gene="lpt3"
                     /locus_tag="WJK78_000938"
     CDS             8977..10554
                     /gene="lpt3"
                     /locus_tag="WJK78_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HEZ7597880.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FMIAALYLFARYKASRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEITEVGS
                     AGASMLDKLWLPALWGVLEVMLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQSAPSKIGQGSVQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTQLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYIVPL
                     VLYSPNKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLSIRDGKAEYVYPQ"
     gene            10656..>12058
                     /locus_tag="WJK78_000939"
     CDS             10656..>12058
                     /locus_tag="WJK78_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ7597881.1"
                     /translation="MDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRPPEIRQLTSSENQGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEAR
                     EIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYHERLP
                     DFYTADAVSDGLRPANPQQTAPSYAREERREGKTVAAQTNFSATAANPLPNPLPQERE
                     QSAAASAVSNDLHPANP"
BASE COUNT         2897 a         3657 c         2968 g         2536 t
ORIGIN      
        1 gctgtggcag aaatcgcaat cgacttcgat gctgccttgt tccaccacca cgccgccgac
       61 ttcttccccg cccagcatca gcagcatatc gctgactttg ccgcgcgaac aggtgcatga
      121 aaattcaaac gtttccggct cgaacacgcg cggcggcgtt tcgtggaaca ggcggtacaa
      181 aacatgttgc gcatccaatt ctgccagctc gtccgccgtc agtgtacgcg ccagcgtact
      241 gacgtgttcc catgcctctt catccaacac cgcttcaggc agacgctgca ccagcagacc
      301 gcccgccgct tcgtcgcttg cagacaggac gatgtgcgta tcgatttgtt cggaacgctt
      361 catatagttc gccaacattt gcgcgatacc gccgccttcc aaaggcacta cgccctgcca
      421 gggttcgccg tctttgggct gcagcgtcag cacgaatacg ccgccctcgc ccaaaaggtc
      481 gccgaggctt tcgtcatcgg ctatttctgc ggtttcgtcc caacgcgcgg ttgcacggac
      541 ggtacggtcg gaagccgctt ccgcaaccag cattttcagc cgcccccgcc cctgaacctg
      601 cacaatcagc gtgccttcgt ttttgaggtt gcccgacagc agaacaccgg cagccaacag
      661 ctcgcccaaa gcgcggcgga tggcggcggg atagtttttc tgttttacaa tgtgctgcca
      721 cacgttttcc agacggacgt gcagcccgcg cacgggcata tcgtcgaaga taaagcgggt
      781 acgcacatcg gcgcggttga tggcggtttg attcatgatt ttctctgact gattgttcgg
      841 atggcggcta tatggttgcg gtcggcgcga aaacaagacg gacggcggat gcgcttccca
      901 aattatcaat aaattatata aaaatcaaca tattaactca atctaacaag ccgttttttg
      961 ccaaacagcc gtttttttat atacaatcaa caagatattt tcgactgata cagcataaca
     1021 tcgcacggcg gcacgatgcc tcctgcgcgg aaacaccgat atggattctt ttttcaaacc
     1081 ggcagtttgg gcggttttgt ggctgatgtt tgccgtccgc cccgcccttg ccgacgagtt
     1141 gaccaacctg ctcagcagcc gcgagcagat tctcagacag tttgccgaag acgaacagcc
     1201 cgttttaccc atcaaccgag cccccgcccg gcgggcgggc aatgccgacg aactcatcgg
     1261 cagcgcgatg gggcttaacg aacagcccgt tttacccgtc aaccgagtcc ccgcccggcg
     1321 ggcgggcaat gccgacgaac tcatcggcaa cgcgatgggg cttaacgaac agcccgtttt
     1381 acccgtcaac cgagcccccg cccggcgggc gggcaatgcc gacgaactca tcggcaacgc
     1441 gatgggactt ttgggtattg cctaccgcta cggcggcaca tcgatttcta ccggttttga
     1501 ctgcagcggc ttcatgcagc acatcttcaa acgcgccatg ggcatcaacc tgccgcgcac
     1561 gtcggcagaa caggcgcgga tgggtacgcc ggttgcccga agcgaattgc agcccgggga
     1621 tatggtgttt ttccgcacgc tcggcggcag ccgcatttcc catgtcggac tttatatcgg
     1681 caacaaccgc ttcatccacg cgccgcgcac ggggaaaaat atcgaaatca ccagcctgag
     1741 ccacaaatat tggagcggca aatacgcgtt cgcccgccgg gtcaagaaaa acgacccgtc
     1801 ccgctttctg aactgatttc ccaaggaata cgcaatgagt atgcccgaaa tgcccaaatg
     1861 gtacgacgat gacggacaga tcgtgtcctg taccgaaaag gtcaaagtga tgtccgaaaa
     1921 tatggccgag ctgtatcaga cggcacaaga cgcgtttgaa gacgcgctgc tgatgggttg
     1981 cggcgaacgt cagttgcgcg attacctgct cgcgctgatt gaaggtttgg aaaatcccta
     2041 ccgcaaagtc tgaacacgcc ccggttgctg cggcacggtt tatccgtgcc gtttttgcgt
     2101 ttgtgcgcgg cttcggcttt tcagacggca tatttgacgt tatgattaaa cagttaacaa
     2161 gatttatcac aacgccgtca aaagacagac acacaacatg aacatcatcc gcgcgctcct
     2221 catcatcctc ggctgcctcg ccgccggcga aaccgccgtt ttcctagcag gcatcaaact
     2281 gcccggcagc atcgtcggca tgggcgtgct gtttgcgctt ttgcaggcag gttgggtcaa
     2341 aacgtcttgg ctacaacagc ttaccgacgc gctgatggcg aatctgacgc tgtttctcgt
     2401 gccgccctgc gtggcggtca tcagctattt ggatttgatt gccgacgatt ggttttcgat
     2461 actggtttcc gcctccgcca gcactttgtg cgtactgctg gttacaggca aggttcaccg
     2521 ctggatacgg agcattatct gatgaacgaa atcctcaggc agcccagcgt tctgcttttc
     2581 ctcacgcttg ccgtgtacgc gcttgcgatt atcgtgcgca cgcgcacggg caatatcttc
     2641 tgcaaccccg tactcgtcag cactatcgtg ctgattgcct acctgaaaat cctcgacatc
     2701 gattatgcgg tgtaccacaa cgccgcgcaa ttcattgatt tttggctgaa acccgccgtc
     2761 gtcgtgcttg ccgtgccgct ctaccaaaac cgccgtaaaa tcttcaacca gtggctgccc
     2821 gtcatcgttt cacagcttgc gggcagcgtt acgggcattg ttacggggat gtattttgcc
     2881 aaatggctgg gcgcggaacg cgaagtcgtc ctctcgctcg cgtccaaatc tgttaccaac
     2941 cccatcgcca ttgaaatcac ccgctccatc ggcggcattc ccgccattac cgccgccacc
     3001 gtcatcattg ccggtctggt cggacagatt gccggttaca aaatgctgaa gaacacagtc
     3061 gtcatgccct cgtccgtggg tatgtcgctc ggcacggctt cgcacgcgat ggggattgcc
     3121 gcctcgctcg aacgcagccg ccgcatggcg gcatacgcgg gactggggct gacgttcaac
     3181 ggcgtactga ccgcgctgat tgcgccgctg ctcatccccg ttttgggatt ttgaacccgt
     3241 ttcagacggc atttcagccc atgctgtctg aacgccgaca cactcgcaag gagaaccgtt
     3301 atggctgtca acctgaccga aaaaaccgcc gaacaactgc ccgacatcga cggcattgcc
     3361 ctctacaccg cccaagcagg cgtgaagaag cccgggcata ccgacctgac actgattgcc
     3421 gtagccgccg gcagcaccgt cggtgcagtc ttcacgacca accgtttctg tgccgcgccc
     3481 gtccacatcg ccaaatcgca ccttttcgac gaagacggcg tgcgcgccct cgtcatcaac
     3541 acgggcaacg ccaacgcggg tacgggcgca cagggcagaa tcgatgcttt ggcagtgtgt
     3601 gccgccgccg cccggcaaat cggctgcaaa ccgaaccagg tgctgccctt ctccaccggc
     3661 gtgattctcg aaccgctgcc cgcagacaaa atcatcgccg ccctgcccaa aatgcagcct
     3721 gccttctgga acgaagcggc acgcgccatc atgaccaccg acaccgtgcc caaagccgcc
     3781 tcgcgcgaag gcaaggtcgg cgacaaacac accgtccgcg ccacgggcat cgccaaaggc
     3841 tcgggcatga ttcatcccaa tatggcgacc atgctcggtt tcatcgccac cgatgccaaa
     3901 gtttcccaac ccgtcctcca actgatgacg caggaaatcg ccgacgaaac cttcaacacc
     3961 atcaccgttg acggcgacac cagcaccaac gacagcttcg tcatcatcgc caccggcaaa
     4021 aacagccaaa gcgaaatcga caacatcgcc gacccgcgtt acgcccaact caaagaattg
     4081 ttgtgcagcc tcgcgctcga actcgcccaa gccatcgtcc gcgacggcga aggtgcgacc
     4141 aagttcatca ccgtccgcgt cgaaaacgcc aaaacccgcg acgaagcccg ccaagccgcc
     4201 tacgccgtgg cacgttcgcc gctggtcaaa accgcctttt tcgcctccga ccccaacctc
     4261 ggcaggctgc tcgccgccat cggttatgcc ggcgttgccg acctcgatac cgacctcgtg
     4321 gaaatgtatc tcgacgatat tttggttgcc gaacacggcg gacgcgccgc aagctacacc
     4381 gaagcacaag ggcaggcggt aatgtcgaag gccgaaatca ccgtccgcat caagctgcat
     4441 cgcggacaag ccgccgccac cgtctatacc tgcgacctgt cgcacggata cgtttccatc
     4501 aacgccgact accgttcctg acccgacacg gcttcagacg gcatacataa aattccgtct
     4561 gaaccgccgg acaacatacc atgacctcca cattcccccg ccgcctcgcc cgcaaaatcc
     4621 gccaaacccg ccgcctgtcg cgcaaaagca tcgcctttgt gttcctcctg gcaggttcgg
     4681 cactcgtcgc cctgaccgcg ctgttttttg cccatcttgc cgattttgcg ctggaactga
     4741 acgccaaact ggttcaacaa tacccgtggt tcgcatgggt cgcgcttcct ttgggtttgc
     4801 cgcttattgc gtggctcaca cgcaaattcg cccccttcac cgccggcagc ggcatccctc
     4861 aagtcatcgc ctcgctgtcg ctgccctacg gcgcacaaaa aacgcggctg atccgcctca
     4921 aaccgacact gttgaaaatc ccgctcacct ttttgggcat gctgttcggc gcgtccatcg
     4981 ggcgcgaagg cccgtccgtg caggtcggcg cggcagtgat gggcgcgtgg ggcgcatggt
     5041 gcaaaaaaca cggtttggca ttcaaaggga tgcaggaaaa cgatttgatg gcggcaggcg
     5101 cggcgggcgg tttggcagcc gcgttcaacg cgccgctggc gggcgtgatt ttcgccattg
     5161 aggaactcgg gcgcggcatc atgttgcgct gggagaggca aattcttttg ggcgtgctcg
     5221 cctccggttt catacaggtc gccattcagg gcaacaaccc gtatttttcc ggcttcaacg
     5281 gcggcgtatt ggaacatatc tttctgtggg tcgcactgtc cggcctggtt tgcggcgcgg
     5341 cgggcgggct gttcggacgt ttgctctatc gcggtgcggc ggcgtttgca ccgcgcaaga
     5401 tacgcggctt catccgcaac cgtccgctgc tgctggcggc actgatgggg ctgctgctcg
     5461 ccctgctcgg cacgttctac caaggcaaaa cctacggcac cggctaccac gaagccgccc
     5521 aagccctgca cggcatctac gaagccccct tcggactcgc cgccgccaaa tggctcgcca
     5581 ccgtattcag ctattgggca ggcgttccgg gcggcatttt cactccctcg ctgaccatag
     5641 gcgcggtttt gggcgagcat atcgccgcca tcgccgacat atcgcagggt gcaaacatca
     5701 tcgtcctcat ctgcatggcg gcatttctgg cgggcgcgac acaatccccg attacttccg
     5761 ccgtcgtcgt catggaaatg acgggcggac aaagcctgct gttttggatg ctaattgcct
     5821 gcattttcgc ctcgcaggtt tcgcgccagt tttcgccgcg tccgttctac cacgcatcag
     5881 gaatgcgctt ccgccagcgc gtgcttcaag aaaccgccgc ccaaaccggc aatgcgcccg
     5941 caagaccgca aacagcaaac agcaaaacgg gaatgccgtc tgaaaattaa aacgcccccg
     6001 atcaaacgcc ggcagccgcc ttgatttgaa taccgttccg ccgccgcttg aaacttcagc
     6061 aacaatgccg tctgaacgac agaatgcggt tttcagacgg catttcccca tcccgatatt
     6121 gcccgaaccc aaccaaagcg tttgctataa ttctattttt taccgcatac gcaccaatca
     6181 tgtttcccga tttctcccaa cccctctcca aagaccgcca cttcctgcaa tccgccttca
     6241 aaaatcccaa caaatacggc ggcttgtcca aagtcgagga aaaataccga aaatcgcacg
     6301 aaatcttttt gaaacgtttg gccgccttgc ccaaacccga attcgacaac accctgcccg
     6361 ttcacgagaa acttgacgaa atcaaaaaag ccattgccga gcatcaggta acgattattt
     6421 gcggcgaaac cggttcgggc aaaaccacgc agctgcccaa gatttgtttg gaactcgggc
     6481 gcggggtagc gggtttgatc gggcataccc agccgcgccg tttggcggcg cgttcggtgg
     6541 cagagcggat tgccgaagag ctgaaatccg aaatcggcag cgcggtcggc tataaagtac
     6601 gcttcaccga ccacacctcg cgcgatgcct gcgtcaagct gatgaccgac ggcatcctgc
     6661 tggcggaaac gcagaccgac cgttatctcg ccgcctacga cacgattatc atcgacgaag
     6721 cgcacgagcg cagcctgaac atcgacttcc ttttgggcta tttgaaacaa ctcctgccgc
     6781 gccgccccga tttgaaagtc atcatcacct cggcaacgat agacgcagaa cgcttctccc
     6841 gacacttcaa cggcgcgccc gttttagaag tgagcggacg gacgtatccc gtcgaaatcc
     6901 tctaccgacc gctgaccggc aaagacgaag acgacgcaga agtggagttg accgacgcga
     6961 ttgtcgatgc cgccgatgaa ttggcgcgat atggcgaagg cgatatcttg gtattcctgc
     7021 cgggcgaacg cgaaatccgc gaagccgccg aagccctgcg caaatccacg ctgcgccgca
     7081 acgacgaaat cctgcccctg ttcgcacgcc tgtcgcacgc cgaacagcac aaaatcttcc
     7141 acccctccgg cgcaaaacaa cgcatcgtgc tggcaaccaa cgtcgccgaa acctcgctta
     7201 ccgtgccggg catcaaatac gtcatcgaca ccggtctcgc acgcgtcaaa cgctattccg
     7261 cacgggcgaa agtggagcag cttcatatcg aaaaaatctc ccaagccgcc gcccgccaac
     7321 gctccggccg ctgcggacgc atctccgcag gcgtatgtat ccgactgttt tcagaagaag
     7381 atttcaacaa ccgccccgaa tttaccgacc ccgaaatcgc ccgcagcaac ctcgccgccg
     7441 tcatcctgcg catggcatcg ctgaaactcg gcgacgtagc ggcattccca tttttagaaa
     7501 tgcccgattc gaggtatatt aatgatgggt ttcaggtgtt gctggaatta ggggcagtgg
     7561 aggccgcctg aaaacaagta ggatatacac ttctacctga caaagaccaa caaacgataa
     7621 aactacggca catctagatg cccaacctac aacattgcac acggtaaaaa catgaaacac
     7681 ttactcatcg attttgaaaa cgttcagccg caaaacttag acaaattact aaccgaaaat
     7741 acccatattt ggctatttat aggtgtatta cacaaaatgt tgcctattag tctggtgcaa
     7801 tccctactac gtttcggcga acgtgtccat cttgtccagt tacaaaaaac ggggaaaaac
     7861 gcattggatt tttacctgtc ctattacctc ggacaaatta ccgccacaga ccccaatgcc
     7921 caaatcggca tactctcgcg tgatggagga tacgatgttc tggtcgaaca tattttgaaa
     7981 aaccaccagg cgaagggtat cgtgcgccta gccaatatag atgaagtaca acatcagaaa
     8041 attgctaccg aaccgccgtc agcattgcgg gaaaacactc ctcagcctga aaccaccctc
     8101 aaaccacagc aaccattaac ttcctatttc caagcagccc taactgcact gcgccgcccc
     8161 gacgctttcc gcccctgccg cctgcataac ctgcgacaaa atctgcgtaa gcatattttg
     8221 agtgatttgt ttaaagaaaa aaccgatgaa gaatgcgaaa taaccactgc taacgttatc
     8281 aataaactca aagcacaaaa cttcatcagc attgatgaac aggaaaccgt ttcctaccat
     8341 ctcagtgata atgatttgtt acaaagaatc caacgccata ttttaagcca acgtcccaaa
     8401 acctacgctg attttcaagc cgtcgtgcaa aaccgagcag atgcacttca cttaacagtc
     8461 ggtaccaacg acattcaatc ctttgcgcga catttgcgcg accaaaacct gatccgccaa
     8521 aacaatggga aaattgaata tgcaccgttt actgaaccta aaccacagcc aacgcccaag
     8581 cagcctaaaa aaaccgcatg ggaacctgat gaaattattt ggaaaaaagt gattgccgca
     8641 ttatcgttaa agaaccgtcc taataaaacc aaaactttac gcaatacaat ccaggcactc
     8701 acaaaatcca atgcacaaga aactgacaaa ctgctacaac atttacaaga tacccaagtc
     8761 ctacgtattg acggtactaa aattgtgtat atcaagtagg atgggcattt atgcctgacc
     8821 tacaaaacca aaaacaacct accaccctta atcaactcca caaacccttt tcagacaacc
     8881 tcgttttttg aaaaacaatc tgtaaacaga tagctgctga agaataccgt tgctgagccc
     8941 caaaacccgt cctgcaactt ttattgtgaa cttcccatta tgaaaaaatc ccttttcgtt
     9001 ctctttctct attcatctct acttaccgcc agcgaaatcg cctatcgctt tgtattcgga
     9061 attgaaacct taccggctgc aaaaatggca gaaacgtttg cgctgacatt tatgattgct
     9121 gcgctgtatc tgtttgcgcg ttataaggct tcgcggctgc tgattgcggt gtttttcgcg
     9181 ttcagcatta ttgccaacaa tgtacattat gcggtttatc aaagttggat gacgggcatc
     9241 aattattggc tgatgctgaa agagattacc gaagtcggca gtgcgggcgc gtcgatgttg
     9301 gataagttgt ggctgcctgc gttgtggggc gtgttggaag tcatgttgtt ttgcagcctt
     9361 gccaagttcc gccgtaagac gcatttttct gccgatatac tgtttgcctt cctaatgctg
     9421 atgattttcg tgcgttcgtt cgacacgaaa caagagcacg gtatttcgcc caaaccgaca
     9481 tacagccgta tcaaagccaa ttatttcagc ttcggttatt ttgtcggacg cgtattgccg
     9541 tatcagttgt ttgatttaag caaaatccct gtgttcaaac agtctgcgcc aagcaaaatc
     9601 gggcagggca gtgttcaaaa tatcgtcctg attatgggcg aaagcgaaag cgcggcgcat
     9661 ttgaaattgt ttggctacgg gcgcgaaact tcgccgtttt tgacccagct ttcgcaagcc
     9721 gattttaagc cgattgtgaa acaaagttat tccgcaggct ttatgacggc agtatccctg
     9781 cccagtttct ttaacgtcat accgcatgcc aacggcttgg aacaaatcag cggcggcgat
     9841 accaatatgt tccgcctcgc caaagagcag ggctatgaga cgtattttta cagtgctcag
     9901 gctgaaaacc aaatggcaat tttgaactta atcggtaaga aatggataga ccatctgatt
     9961 cagccgacgc agcttggcta cggcaacggc gacaatatgc ccgatgagaa gctgctgccg
    10021 ctgttcgaca aaatcaattt gcagcagggc aggcatttta tcgtgttgca ccaacgcggt
    10081 tcgcacgccc catacggcgc attgttgcag cctcaagata aagtattcgg cgaagccgat
    10141 attgtggata agtacgacaa caccatccac aaaaccgacc aaatgattca aaccgtattc
    10201 gagcagctgc aaaagcagcc tgacggcaac tggctgtttg cctatacctc cgatcatggc
    10261 cagtatgtgc gccaagatat ctacaatcaa ggcacggtgc agcccgacag ctatattgtg
    10321 ccgctggtgt tgtacagccc gaataaggcc gtgcaacagg ctgccaacca ggcttttgcg
    10381 ccttgcgaga ttgccttcca tcagcagctt tcaacgttcc tgattcacac gttgggctac
    10441 gatatgccgg tttcaggttg tcgcgaaggc tcggtaacgg gcaacctgat tacgggtgat
    10501 gcaggcagct tgagcattcg cgatggcaag gcggaatatg tttatccgca ataagcgacg
    10561 tgaaaaccaa taaaaacaaa tttagatgat gtcggggaag atgcccgacc gacaagacta
    10621 tgcaaaatat gaaaaaccaa gtacgcggat caggcatgga tgcacgatcc aatccggcca
    10681 atgtttcaga cggcctgcaa aacagttcgg gtcatatcgg taccaacacg cgttaccgcc
    10741 tgaccaaact cggcgaacaa atggcgcgcc tgcccatcga cccgaaaatc gcgcgcattt
    10801 tgttggcggc gaagaaacac gactgcatgg cggaaatatt ggtgatcgcg tccgcactgt
    10861 cgattcaaga cccgcgcgag cggccgttgg aagcacgcga tgccgccgcc aaggcgcacg
    10921 agcgttttac cgacaagcaa tctgactttc ttgcctatct gaacatttgg gacagcttcc
    10981 agcgcgagcg cgacaagggt ttgtccaaca agcagttggt gcaatggtgc cgtcaatatt
    11041 tcctgtcgca cctgaggatg cgcgagtggc gcgagctgca ccaccagctt gcccaaaccg
    11101 cgattgaaat gggtttgacc accaaggaag ccgctttcag acgacctccc gaaatcaggc
    11161 agctcacgtc gtctgaaaac caaggcgacc aagacctatc cgccaaactc aagcaaaaac
    11221 aactggataa aaagcaacac cgcgcccaaa tccgcgccgc caaagaagcg ggctacgaac
    11281 aaatccaccg cgccctgctc actggcctta tcgccaacgt cggcatgaaa tcgcccgacg
    11341 gcaacgacta caccggcgcg cgcggcagcc gcttccacct tttccccgcc tccgccctgt
    11401 tcaaagccaa gcccaaatgg gtgatggcgg cagaattggt tgaaaccacg cgcctttacg
    11461 cgcgcgacgt cgccgttatc cagcccgaat ggatagagca ggaagcgccg cacctcgtcc
    11521 gctatcatta tttcgagccg cattgggaac aaaaacgcgg cgaagtcgtc gccagcgaac
    11581 gcgtgacgct ttacggtctg accgtattgc cgcgccgccc cgtgtcttac ggcaaagttg
    11641 cccccgaaga agcgcgcgaa atctttatcc gcagcgcgtt ggtggcgcag gaatgcgatt
    11701 tgaaagcgga tttttttgtc cacaacaaaa agctgattaa agaaattacc gaactcgaac
    11761 acaaatcgcg caagcaagac gtattggtcg acgacgaagc cctgtttgcg ttttatcacg
    11821 aacggctgcc cgatttttat acggcggatg cggtttcaga cggtctgcgt cctgcaaatc
    11881 cccagcaaac tgccccctcc tacgcgaggg aagaacggag agagggcaaa acagttgccg
    11941 cacaaaccaa cttctccgca accgcagcaa accctctccc taaccctctc ccacaggaga
    12001 gggagcagag tgccgcagct tcagcggttt caaacgacct gcatcctgca aatcccca
//
LOCUS       DAWKOX010000048        11715 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.048, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000048 DAWKOX010000000
VERSION     DAWKOX010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11715
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.048"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(71..487)
                     /locus_tag="WJK78_000940"
     CDS             complement(71..487)
                     /locus_tag="WJK78_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597882.1"
                     /translation="MSGEKSENLPADEQQKMLQEFLELQKQDIAVKQKELESRKDEIQ
                     SHERIALATIEAQKQGEQQHGEIFKEVHKRRLNAVIAISFLIAAVLITALWRDKDSVA
                     IEIVKIGGAVALGYFAGINRGKAQTLEKQRREKDSD"
     gene            complement(484..675)
                     /locus_tag="WJK78_000941"
     CDS             complement(484..675)
                     /locus_tag="WJK78_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597883.1"
                     /translation="MNTVKEYTAVRERLLNAADYLEEVRKDRKTGNIASVEFVPPKIG
                     ARGYGKFKVRYKTLVAVDL"
     gene            complement(719..961)
                     /locus_tag="WJK78_000942"
     CDS             complement(719..961)
                     /locus_tag="WJK78_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597884.1"
                     /translation="MDTLKVNPFPNKIKEKCRLKTARMLFQTAFFVVGHQCPAICAAL
                     RLSRYGILVCIFRRNLPYIVLKYYTVVLYGFDFLEK"
     gene            1198..1365
                     /locus_tag="WJK78_000943"
     CDS             1198..1365
                     /locus_tag="WJK78_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597885.1"
                     /translation="MVDEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNIDFSQW
                     VKSIIKEKIKK"
     gene            1638..1823
                     /locus_tag="WJK78_000944"
     CDS             1638..1823
                     /locus_tag="WJK78_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597886.1"
                     /translation="MPDEKTLKAKQAEYQRKYDQKRLMKTVSFHLEREKELVDFMQKE
                     IPDFSNWVKSVMKEKMK"
     gene            2024..2224
                     /locus_tag="WJK78_000945"
     CDS             2024..2224
                     /locus_tag="WJK78_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597887.1"
                     /translation="MDSIKKAQEKYALKRVVKTVSFNSEKELDLIKFSENLDFSNWVK
                     SKIRGDMESEKFKKKAKKNIDK"
     gene            2356..2964
                     /locus_tag="WJK78_000946"
     CDS             2356..2964
                     /locus_tag="WJK78_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HEZ7597888.1"
                     /translation="MKDNFTMNTQLIPTVSGQLDNQTQALVDAHDLHKFLGVETPFSK
                     WIQRRIEEYGFTQALDFIGVDKIVRTEAGFFGQRDKTVQGYYLSLDMAKELCMVERND
                     KGRQARRYFIEMEKQAKALPDAVLYRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIG
                     KLLDMNPGAVSYRLKKLNDLGFLEYVPKPKMVVQQQSLGLEG"
     gene            2968..3183
                     /locus_tag="WJK78_000947"
     CDS             2968..3183
                     /locus_tag="WJK78_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597889.1"
                     /translation="MNTTYTLTFDQDSLKALNLLVFTLNHLKVLEMDMEGIEDGLSAV
                     IETASEKADKLSAAFYNAVYEQEEKAA"
     gene            complement(3344..3862)
                     /locus_tag="WJK78_000948"
     CDS             complement(3344..3862)
                     /locus_tag="WJK78_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HEZ7597890.1"
                     /translation="MAKTRIKQPAIEAAQDKTEVTAFIRQIGDLQREVKRLETEAGDK
                     KAAIEEEYAAQAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDAILNQKERFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
     gene            complement(3972..4139)
                     /locus_tag="WJK78_000949"
     CDS             complement(3972..4139)
                     /locus_tag="WJK78_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597891.1"
                     /translation="MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGMWKTAEAET
                     LAQAITLWEEV"
     gene            complement(4132..4305)
                     /locus_tag="WJK78_000950"
     CDS             complement(4132..4305)
                     /locus_tag="WJK78_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597892.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATKFMVKRNREQEVAEYQAQFEDKD
                     GKGRLKTEGNKDE"
     gene            complement(4414..4680)
                     /locus_tag="WJK78_000951"
     CDS             complement(4414..4680)
                     /locus_tag="WJK78_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597893.1"
                     /translation="MQVLKKVDWKMFVARSFWRWVPVGLTVGVWCFVAGMALHSCAKE
                     PEPVAKEPTKVEAMERQADLEVKVWEGQYESMSVEEKMKGIVYE"
     gene            complement(4770..5684)
                     /locus_tag="WJK78_000952"
     CDS             complement(4770..5684)
                     /locus_tag="WJK78_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEZ7597894.1"
                     /translation="MKQINQALQQKLVEFKEKSGMNQTQLARGIDTSPASISMYLNGT
                     YADKGGNYETIETKIEAFLEMEDSKARREELVLGFVSTKTTRRIAEVMRDAHEGGETV
                     VIYGQAGLGKTQSVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGRLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKHG
                     ELVQLYSRVSVALNLGESLPDDELFEIAKAALPDADEETLLELVKHSNGNTRRMSKLM
                     RGAVRTANKNGIKMQAGIVKKYSSLIIR"
     gene            complement(5720..7696)
                     /locus_tag="WJK78_000953"
     CDS             complement(5720..7696)
                     /locus_tag="WJK78_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7597895.1"
                     /translation="MKYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPAEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     NARCAVVAAVLGIKYQYGCSAKAAVAQFLGLLAESKLDAVTLGNLEKANDRSRTAKVG
                     ERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIVGNPQGRGI
                     IERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPSWSRFIADVVKCIDEYNNRPHGELPRHPDGGHYTPKAYREMRLEQDGIAPDMLSA
                     QELATMFMPQEVRKVQRGWLDLFNNSYFSTELAEYHKDEVRVSYDLSDASVVNVFDMD
                     GKFITKAQADGNTREAFPTARIDQLAENRRKGKIKRAENAIKLANAEVNPALEQAAAW
                     DELGHLGGNVIEAEYAVLPKTGTDDFVLFETDRS"
     gene            complement(7698..7949)
                     /locus_tag="WJK78_000954"
     CDS             complement(7698..7949)
                     /locus_tag="WJK78_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7597896.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            7993..8892
                     /locus_tag="WJK78_000955"
     CDS             7993..8892
                     /locus_tag="WJK78_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HEZ7597897.1"
                     /translation="MPALTVTWMIYTKYLVYQIYLVIFCDVFMERIDLALNLVEERSR
                     LGYSRKNFAEQTGCSAESLRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNA
                     VSDDLNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGK
                     EHITLEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDK
                     AETYLRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFSVES
                     LTELSDEDLQKTYAAVSTKKRKK"
     gene            9247..9864
                     /locus_tag="WJK78_000956"
     CDS             9247..9864
                     /locus_tag="WJK78_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ7597898.1"
                     /translation="MVWPEYSPQENVALFRHNGEILLSGINIKLKNGNSLLIRGPSGC
                     GKTSLLRALAGLWPFGSSGKVSHPPHQDILFLPQRPYTAQGSLRDAICYPAIDKQHPE
                     LIEAMNTCRLGYLVDKLDKTDDWQHKLSPGELQRVAFVRALLSQPKVILLDEATAALD
                     EPTEAMLYRALKQKLPDSIIISIGHRSTLNAFHNMHLDVGNVACG"
     gene            9968..10636
                     /gene="hda"
                     /locus_tag="WJK78_000957"
     CDS             9968..10636
                     /gene="hda"
                     /locus_tag="WJK78_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ7597899.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLQHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            10633..11301
                     /locus_tag="WJK78_000958"
     CDS             10633..11301
                     /locus_tag="WJK78_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7597900.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAKYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLETGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLQSYGKTYFYSDSRNDLPLLRLVSEPVAANPDAELEKEAKEKGWPV
                     LNFK"
BASE COUNT         3126 a         3140 c         2431 g         3018 t
ORIGIN      
        1 aaaaatgccg tctgaaaacg agctttgcga gtttcgccaa aacgtttcag acgacctttt
       61 ttactacaat ctaatcactg tctttttcgc gccgttgctt ttccaaggtt tgcgctttac
      121 ctctgttgat tcctgcaaaa tatcccaaag ctaccgcccc gccgattttg acaatttcaa
      181 tagcgacgct gtccttatcg cgccataacg cagtaatcag cacggcggca atcagaaaag
      241 aaatagcaat cacggcattc agacggcgtt tgtgtacctc tttgaaaatc tcaccatgtt
      301 gctgttcacc ctgtttttgc gcttcgatgg tagccagtgc aatgcgttcg tgagattgga
      361 tttcgtcctt acggctttcc aactccttct gtttgactgc aatatcctgt ttttgaagtt
      421 ctaaaaactc ctgaagcatt ttctgctgct catcggccgg cagattctcg gatttttccc
      481 cgctcataaa tcaaccgcca ctaaggtttt gtaacggact ttgaatttgc cgtaaccccg
      541 agcccctatt ttcggcggca caaattccac ggacgcaata ttgcccgtct tacggtcttt
      601 acggacttct tccaaataat cggcagcatt gagcagccgt tcgcggactg ccgtatattc
      661 tttgacggta ttcatttttc aacctcgccc aaatagtgca aatattagca tatgggattt
      721 atttttcaag aaaatcaaat ccatataaaa caaccgtata atattttaat actatatatg
      781 gtaaatttct tctaaaaata cacactaaaa taccatatct tgataaccgc aacgccgcac
      841 aaatggcagg gcattgatgc ccgacaacaa aaaatgccgt ctgaaacagc attcgagctg
      901 ttttcagacg gcatttttct ttgattttgt tggggaaagg gttgactttt aacgtgtcca
      961 cgtttataat tcaattcatc ggcgtagtga gggccgatac gggaaaagcc ccaccgaagc
     1021 ggggctcaac tgggagaaag aagatgaata aacgcactat tcaaattctc atcttggtcg
     1081 cagttttcat gttggcaagt gctaatgcct actaaagact gaccagctgg gggcggtcgc
     1141 cgctgtcccc agtcccaatc ttacaaaata cggtttaaaa aatcaaggag tttgcctatg
     1201 gttgatgaaa aactggcaga aaaccgaaag cgttacgagc agaaacgggt gattaagaaa
     1261 gtctcgttca atgccgaaac ggaaaaagaa cttttggaat atgcccaaaa tatcgatttt
     1321 tcccaatggg ttaaatcaat catcaaagaa aaaatcaaaa aatagcttga ctaaattcta
     1381 gaaatactag ataatacgcc tatctgataa agcaaagccc cgaagcggca acttcggggg
     1441 cttatcggat agaaaggagg cttgtggaaa tgacaaaact ggcgaaagtt gtttttttca
     1501 tcattctgct tttaagctgt agtccggctt actaagcaag ttgattaaac acaaggggtg
     1561 gcagaacacc gcgccccttt cgccaacctt tctgcaagcc attttactac aacgatttta
     1621 aaaatcaagg attgcctatg cctgatgaaa aaacgctaaa agcaaaacaa gctgaatatc
     1681 agcgaaagta tgaccaaaag cggctgatga aaacagtttc tttccatttg gaaagagaga
     1741 aagagttggt ggattttatg caaaaagaaa ttcccgactt ttcaaactgg gttaaatcag
     1801 tcatgaagga aaaaatgaaa taagaaaatt ccgccgatgg gaaaacatcg gcggaacagg
     1861 tggaaagcag agcagcaact ctctttatgt agggcatgaa aaaaggccgt ctgaaacagg
     1921 ttttaaaccc catttcagac ggctttttgt tgtaatacat cttgattaaa atggttttta
     1981 gtattaccat aatcgtgttt taaaacctat ttaaaggaag attatggact cgattaaaaa
     2041 ggctcaagaa aaatacgcac tcaagcgagt agtgaaaaca gtatcgttca attccgaaaa
     2101 agaacttgat ttaattaaat tttctgaaaa tttagatttt tcaaactggg taaaatcgaa
     2161 aattagagga gatatggaat cggaaaaatt caaaaaaaaa gcaaaaaaga atattgacaa
     2221 atagaattac cataatttaa aatttccata tcttgtgcaa cacaagatat ggaaatcccc
     2281 gataagtgac agcttatcgg ggatagtgga aaagcaacgt tagagcgttc ttttccttgt
     2341 catctcaacc ttgaaatgaa agataatttt accatgaata cccaactcat cccaactgtt
     2401 tcaggtcaat tggacaatca aacacaagca ctggttgatg ctcatgacct gcataagttc
     2461 ttaggtgtgg aaacaccatt ttctaaatgg attcagcgtc gcattgaaga atacggattt
     2521 acacaagccc ttgattttat cggcgtggac aaaattgtcc gcaccgaagc aggtttcttt
     2581 ggacagcgtg ataaaactgt tcaggggtat tatttatccc tcgacatggc aaaagagctg
     2641 tgcatggtgg agcgcaacga caaaggacgc caagcccgcc gatattttat cgaaatggag
     2701 aaacaggcaa aagccctgcc tgatgccgtg ctataccgca tcgatgcatt ggaagacgcc
     2761 tatttccaag ccgcgcccga aatgctcgcg ctgctgcgct accgcagtat gggcttgaac
     2821 ctgaccgaaa taggcaaact cttggacatg aaccccggcg cggtttccta ccgtctcaaa
     2881 aaactcaacg atttgggttt cttggaatat gtccccaagc ccaaaatggt ggtgcaacaa
     2941 cagtctttgg gattggaggg ttaagccatg aataccacct ataccctgac tttcgaccaa
     3001 gacagcctca aagccctgaa tctgctggtg ttcacactca accatctgaa agttttggag
     3061 atggacatgg aaggaatcga agacggtttg tctgccgtga ttgaaaccgc ctccgagaaa
     3121 gccgacaagc tgtccgccgc tttctacaac gccgtgtacg agcaggaaga gaaagcagcc
     3181 tgaatctagg gcatgaaaaa aggccgtctg aaacaggttt taaaccccgt ttcagacgac
     3241 ctttaaatca tgggttaaag cctatttgaa ccggctaggc aagctcctgc tccgtaggct
     3301 caatcacgtt tcaacacact gaattgaaat caggctgttg attttataga atttgttcgc
     3361 tcggctcaat cacaaaatcc tccacgccgc tcacaatctt aatccccggc acttggccgt
     3421 ctgaaaaacg ctctttttga ttcaggatgg cgtctttgtc gatttccttt ttagtgcgga
     3481 caaactcggc aaaggcggat ttttccgaga gccacgccaa gacggcggcc acgcccgtta
     3541 ccttgacgga tggcggacgg atgcgccatt taatcaggcc ggtagtaaag tccacggttt
     3601 tggttttacc gttttccgtc agctcgtcct tatgtgcctc gcagtatgcg gccacacgtt
     3661 cggtcaggct catgatttcg gcacacatcg gcgcggcttg ggcggcatat tcttcttcga
     3721 tggccgcttt tttgtctccg gcttcggttt ccaggcgttt gacttcgcgc tgcaagtcgc
     3781 cgatttggcg gataaatgca gtaacttccg ttttgtcttg tgccgcttcg atggcgggct
     3841 gtttgattcg ggttttagcc attttctctt cctttcaggt tgggtttaac atttcggctt
     3901 actcaagcct tgttcgcgtt cgtgcttggc aagtgcttca actttcgcgc ggtttctcaa
     3961 aaacttaaac atcacacttc ctcccataaa gttatcgcct gagccaaagt ttccgcctcg
     4021 gcagtcttcc acatcccgtc cggcgcacgc gctgcaatca caaagccttc gccgtccttc
     4081 ttcatgacca tcagctcgcc acggtcttcg agccattcga ttaaatcttt ttcattcatc
     4141 tttgtttcct tccgttttca gacgaccttt gccgtcctta tcttcaaact gcgcctgata
     4201 ttcggcgact tcctgctcgc ggtttcgctt caccataaac ttcgtcgcac gcctgcggtg
     4261 ttgtccccaa gcctgccaat ccgtattacg tcgtccgaaa ctcatttcac acatcctttc
     4321 acaatcgcct tatcgccata tttcgcgcgg atttccttta ccgcccgtgc caaagcctct
     4381 tttttcgccg cagggctcaa taaaattggc ttatcactca taaacaatcc ctttcatttt
     4441 ttcctcgacg ctcattgact cgtattgccc ttcccatacc ttgacctcca aatccgcctg
     4501 tctttccatc gcctcaacct tcgtcggctc tttcgcaacc ggttcgggtt ctttcgcgca
     4561 ggaatgcaac gccattcccg ccacaaaaca ccacacgccc accgtcaaac caaccggcac
     4621 ccaacgccaa aaagagcgcg ccacaaacat cttccaatca actttcttca aaacttgcat
     4681 tttgcgtttt ccttttaaaa caacaactta ttaaaatcat agggtaaaaa aatatatagc
     4741 cctgtcagag acttaccgtt tcagacggcc tatcggataa tcagggagct gtatttctta
     4801 acgataccgg cctgcatctt gataccgttc ttgttcgccg tgcgtaccgc gccgcgcatc
     4861 aatttactca tccggcgcgt attgccgtta ctatgtttaa ccagttccaa gagcgtttct
     4921 tcgtccgcat caggcaaagc cgctttcgca atctcaaaga gttcgtcatc cggcaaagat
     4981 tcgcccaaat tcagcgcaac agacacgcgg ctataaagtt gcaccagctc gccatgctta
     5041 ccgcgcaaat tcgcaaccag tcggggcata ccgctcaaca ccaaaccgca gcccgtttca
     5101 tcatgcagtc ggcggataat ctcaagggcg cgcaagggca ggttttccgc ttcatcgacc
     5161 acaatcagac ggcccgaatc gcgcaggcgg tcagatacag actcaaacaa atcattcagg
     5221 ctgcccatcg ccgatacctt cgccgccgtc gccaacttgc gcatcaggac caaagccgta
     5281 aagctcggat tagcctcaat caagatagcc gcagggtttt tctcgcagta gtttttgacc
     5341 gactgcgtct tgcccaaacc cgcctgaccg tagatcacca ccgtttcgcc gccttcgtgc
     5401 gcatcgcgca tcacttccgc gattcggcgt gtcgtcttag tcgatacaaa tcccaacacc
     5461 agctcttcac gtcgcgcctt actgtcctcc atctccaaaa acgcctcgat tttcgtctcg
     5521 atggtttcat aattgccgcc tttatcggca taagtgccgt tcagatacat actgatggag
     5581 gccggcgaag tatcgatacc gcgtgccagt tgggtttggt tcattcccga tttttcttta
     5641 aattcaacca gtttttgttg caatgcttga ttaatttgtt tcattttttt agtcctttta
     5701 aaagaggttt aaaaccgttt taacttctat ccgtctcaaa tagcacaaaa tcgtccgtgc
     5761 ccgttttcgg caataccgca tactccgcct cgatgacgtt tccgcccaaa tgtcccagct
     5821 cgtcccaagc tgccgcctgt tccagtgccg gattgacttc cgcatttgcg agcttgattg
     5881 cattttccgc ccgcttgatt ttgccttttc ggcggttttc cgccagttgg tcgatacgcg
     5941 ccgtcgggaa agcctcgcgg gtattgccgt cggcctgcgc cttagtgata aacttgccgt
     6001 ccatatcaaa cacattgacc accgacgcat cgctcaaatc gtagctgacc cgtacctcgt
     6061 ccttgtgata ctccgccagc tcggttgaga aataagagtt gttgaacaaa tccagccaac
     6121 cgcgctgtac ctttcgcacc tcttgcggca taaacatcgt cgccagctct tgcgccgaca
     6181 acatatccgg cgcgataccg tcctgttcca gcctcatttc ccgataagcc ttcggcgtat
     6241 aatgcccgcc gtcaggatgt cggggcagct cgccgtgcgg gcggttgttg tattcgtcga
     6301 tacacttgac cacatccgcg ataaaacgcg accagctcgg cagttttttc aaatatttct
     6361 gttgttcctc cgttaaatcc ttgccttttt ccaaagcatt aaacgcactt tccatcttgc
     6421 ggtacatcag gttcttcgta ctgctgtcca ttcctgcgcc cgcaaacgtc tcatactggc
     6481 gcgccatctc aatcagattg tctttccacc atcgctcaat gatgccgcgt ccttgcgggt
     6541 tgcccacgat acccgtttca tgccggatac ccaatcggga cgtaatacct gtgatttcat
     6601 ggtctatcgt cttgccggtt tggccgccgc cgttatccga gtaatagata atcggcaaac
     6661 caaaatgctt gaccccgata cgcagagcgt ccgataccgc cacacaactt tcagcaagag
     6721 agaccgaaaa cccgaccaca aaccgcgtac aaccatcaat aatcaccgtc acttccggct
     6781 taaacggcct gccgtgtaca gggtgcgcca ccttcgcctt aaagctgtgg ccgtcgccga
     6841 tccaaacatc gttcggcttc aaagcccccc aatcacgttt cacataaggc agcagcgatt
     6901 tataagccgc ccccgttttc ctgccgcgct cctgcataat cagcggcagc ttgtcccaaa
     6961 cgcgacgcac catactcaaa ttaggcacat cattgaccgg catattttcc gcttcagccc
     7021 actgcacaaa tcggcggtaa ctgtgcgcca gcttcggagc tgaagggatg ttgtgaaact
     7081 gcataaacat cggcaaccaa ccgtagctct caatcggctt gaccgccttc gtcgtcttcg
     7141 gagccaaagc aaccaaccgc tccgtcgcgt tttccgcttt caaataagca gaaatccagc
     7201 cgtctaaagt acgttcgcca acctttgccg tccggctgcg gtcattggcc ttttccaagt
     7261 tcccaagcgt gaccgcgtcc aatttacttt ctgccagcaa gcccaaaaac tgagccaccg
     7321 cagcctttgc agagcaaccg tattggtatt taatccccaa taccgccgcc accaccgcac
     7381 atcgcgcatt cgccaccgac cgttgtttct cgttcaacag cttggccgct tcagccagtg
     7441 cctgagccga catcgccgtc cccggtctga cttggggcag cattttcggc atcttctccg
     7501 ccagctcgtc cgactgccgt ttcatgatgg ctgctcggat ttcggcaggg agggcatatt
     7561 caacaccacc acccttacct tgacgccttc tcgtttgcca accatccctt tgcgcttttt
     7621 ttctcagccc tattactgtt cttggcatat ttggcaaccc aaaattaagc aggcttttga
     7681 ggtccatata tttcatttca acccactccg agcatctctt tcaattcagc tatctttttg
     7741 tctcgacaat ctgttttctt gtaatgcgga aaaacttcaa ctaaatcttt ttgaatcact
     7801 ttcgcgattg cttccgcaat tcttttgctt cctcgtccat ttcttatgac ctcagaaaca
     7861 gattggttag ttacccctaa agccgaagcc aacattcttg ccgatatatt tttttcttct
     7921 aaggatttat agatttcgtt cgcttgcata atgcctccat gatagaatcc attacttacc
     7981 ttacaggctt taatgcctgc cttaactgtt acttggatga tatacacaaa atatttggta
     8041 taccaaatat atttggtaat attttgcgat gtttttatgg aacgcattga tttagcattg
     8101 aatttagttg aagagagaag ccgacttgga tactctcgaa agaattttgc tgagcaaact
     8161 ggatgcagtg cagaaagttt gagactgtat gaaagcgggc aggtcaacat tcctgcggac
     8221 tttttacttg ctgctgtcca attaggggtg gatattcaat ttgtctttac aggcattcat
     8281 tcggcaaatt taaatgctgt ttcagacgac cttaataaaa aattggacga cgctattggc
     8341 aaatcaaacg ttgagaatca gattaacggc aacgtcagta acgctgttat cgcctcatct
     8401 ggttcggttg ttcatcaaat taatacccaa aatcacgtca tcagaacccg tgtcgattca
     8461 aaacccggca aggaacatat aacgcttgag caagcttcaa agctgcaaca acttgttaaa
     8521 caagttgccg cagcagaaga gattgccaaa cggtcgccaa aatcaatccg tgcaatttgg
     8581 gctagtctga atgctcactg taaagttcca agttacaaac taatcgcatt gagcgattac
     8641 gacaaagcag aaacttatct cagaaaatgg ctgggtaggt tgagcaatac agcaacatca
     8701 aagaacaacg atcccgactg gcgaaaaaag aaatacgctt atatcaaatt aaatgtaaaa
     8761 cagcttgagc ttgaagattg gttgaaaagt tacctcgaaa aaaatttctc agtagaaagc
     8821 ctgactgaat taagtgatga agatttgcaa aaaacatatg cagcagtatc gactaaaaaa
     8881 cggaaaaaat aggcttaaac atgaaactcc gcctttaaat tcaagtttca tgtttagctt
     8941 atggtcttca gatgctttgt ttttttagat gtatgatatt aaaagatttt ttcaaacatg
     9001 gaactattat acaagttcca tgttcagttt ctagttaaag ccttttataa acattctaat
     9061 caaccacgcc gaaaccgagc cgcgcgacgg cctatatgtc ttgcgtatag gcaatgacct
     9121 ctttgtcaaa cgtgtgcaac gtataccggg caaactgctt gtaacgtctg aaaatccacg
     9181 ttacgcaccg tttgaaatag atttgagtaa tacccaagac gacatcgcca tcataggccg
     9241 tgttgagtgg tatggccgga gtattcccca caggaaaacg tcgctctgtt ccgccacaac
     9301 ggcgaaatcc tgttgagcgg catcaacatc aaactcaaaa acggcaactc cctactgata
     9361 cgcggcccga gcggttgcgg caaaacttcg ttgctgcgcg cgctggcggg gctttggccg
     9421 ttcggcagca gcggcaaagt cagccatccg ccgcatcaag acatcctctt cctgccgcaa
     9481 cgtccgtaca cggcacaagg cagtctgcgc gatgcgattt gttaccctgc catcgacaaa
     9541 caacatccgg aactgatcga agccatgaat acctgccgat taggttatct ggttgataaa
     9601 ttagataaaa ccgatgactg gcaacacaaa ctctccccag gcgaactgca acgtgttgcc
     9661 ttcgtccgcg ccctactctc gcagcccaaa gtcatcttgc tcgatgaagc taccgccgct
     9721 ttggacgaac cgaccgaagc catgctctac cgcgccttaa agcaaaaact gcccgacagc
     9781 atcatcatca gtatcggcca ccgcagcacg ctcaacgcgt tccacaatat gcacctcgat
     9841 gtcggcaacg ttgcctgcgg ctgaacgatg ccgtctgaag ccgttttcag acggcatcgt
     9901 caaattggaa aggcgcgcga aaacaacgta caataaacct atctgccaac ctctgaaatg
     9961 ctgcaccgtg aaccagctta tttttgattt tgccgcacac gactatccaa gtttcgacaa
    10021 attcctcggc acggaaaatg cggagctggt ctatgtcctc caacacaaac acggacagtt
    10081 tatctatgtc tggggtgaag aaggcgcggg aaaaagccac cttttgcagg catgggtcgc
    10141 acaggcactc gaagccggca aaaacgccgc ctatatcgat gccgcctcca tgccgctgac
    10201 cgatgccgcg ttcgaggcgg aataccttgc cgtcgatcaa gtcgaaaaac tgggcaacga
    10261 agaacaagcc ctgctttttt ccatcttcaa ccgcttccgc aacagcggca aaggcttttt
    10321 gctgctcggt tcggaataca cgccccagca gcttgtcatc cgcgaagatt tgcggacgcg
    10381 tatggcatac tgcctcgttt acgaagttaa gcccctaacc gaccaagaaa aaatcgacgc
    10441 gctcgccagt atggcggcgg cacgccaagt aaccgttgat tccgaaattt tcgaatacct
    10501 gctcaaacac tggcggcgcg atatggacag cctgatgatg atgctcgaca cgctggacaa
    10561 ctacgccgtc acgatgggca aacgcatcac cctgccgctt ttgcgccagc ttttgaaaca
    10621 acaggaaacc caatgaaaaa cctcgccatc ttcgacctcg acaacaccct catcaacacc
    10681 gattccgacc acgcctggcc gcaatacctc atcaaaaaag gcttggttga cgctgccgaa
    10741 accgaagcgc aaaacgaaaa attctaccgc gactaccaaa acggctgcct cgacatcgac
    10801 gcattcctca aattccacct cgccccgctc gcccgctaca gcaaagaaga gctggcggaa
    10861 tttcaccgcg aatttatggc gaaatacatc atcccccaca tctcgcctat gcagcgtatg
    10921 ctggtgcaga gccaccaaat ggcaggcgac gaaaccctcg tcatctcctc aaccaacgag
    10981 ttcatcatca cccccgtctg ccaccttttc ggcatcacca acatcatcgg cacacaactc
    11041 gaaaccggtt ctgacggccg ctacaccggc aattacatcg gcacgcccag cctcaaagaa
    11101 ggcaaaatta cccgcctgaa ccaatggctt gccgaacgcg gcgaaacgct ccaaagctac
    11161 ggcaaaacct atttttacag cgactccaga aacgacctgc cgctgctgcg cctcgtcagc
    11221 gaacccgtcg ccgccaaccc cgatgccgag ctggaaaaag aagccaaaga aaaaggctgg
    11281 ccggttttga atttcaaatg acgcaatgcc gtctgaagcc cgattcggcg ttcagacggc
    11341 attggggctg aaatcccaaa aactcaaagc cacaggaatt tatccggaaa aacaaaaaac
    11401 acaggaattc atcgggaaaa acaacaatct ttccaccgtc attcccacga aagtgggaat
    11461 cttgatccgt ccgcacggaa acttatattt cgtcatttgc acccgacata attcaatact
    11521 ttattttgca ataaattaac ggatgctgac aaattagatt ggattaatta ccctattatc
    11581 catattgggt tatcgggttg ctaattgagc agagcgtagc aaaccataaa gtgagtgttt
    11641 ccacccactc tgcatttact atgaagtggt tattaaatat gataatgaga cctattaaat
    11701 ttagtatggt aaata
//
LOCUS       DAWKOX010000049        11644 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.049, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000049 DAWKOX010000000
VERSION     DAWKOX010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11644
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.049"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..801
                     /locus_tag="WJK78_000959"
     CDS             <1..801
                     /locus_tag="WJK78_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7597901.1"
                     /translation="RTPNIKYIYQDNQGLSEARNTGIKNSNGKYIVFIDSDDFINCQV
                     LLDFLSKDDIDMPDVVFLNAVKYDKGSVSYFGEDYQPEKILNQSKVEVLKGLCRFRKF
                     PGSAWNKIIKRELIIKEKLFFEKGIYSEDVEWSMRLFNAATTFSYLDGCYYYYRQGRE
                     DSITGTVSEKSIKSLLYILEKNAEMEFNRDISSYLYSFLSYEYLVLLFIMTSKNIACD
                     ADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            842..1372
                     /locus_tag="WJK78_000960"
     CDS             842..1372
                     /locus_tag="WJK78_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ7597902.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLEGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(1392..1522)
                     /locus_tag="WJK78_000961"
                     /pseudo
     CDS             complement(1392..1522)
                     /locus_tag="WJK78_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234705.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor"
     gene            complement(1541..1729)
                     /locus_tag="WJK78_000962"
     CDS             complement(1541..1729)
                     /locus_tag="WJK78_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor"
                     /protein_id="HEZ7597903.1"
                     /translation="MPSKPEKRASDGIFACNSNADGQNQGASDTAIGHPVRMNLGLTQ
                     ERWPDIVFHETREHSVKL"
     gene            complement(1748..3343)
                     /locus_tag="WJK78_000963"
     CDS             complement(1748..3343)
                     /locus_tag="WJK78_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ7597904.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWTPA
                     PKPRDATVRMVEPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGRFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(3450..3845)
                     /gene="hisI"
                     /locus_tag="WJK78_000964"
     CDS             complement(3450..3845)
                     /gene="hisI"
                     /locus_tag="WJK78_000964"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ7597905.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(3876..4643)
                     /gene="hisF"
                     /locus_tag="WJK78_000965"
     CDS             complement(3876..4643)
                     /gene="hisF"
                     /locus_tag="WJK78_000965"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ7597906.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNSENTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(4656..5393)
                     /gene="hisA"
                     /locus_tag="WJK78_000966"
     CDS             complement(4656..5393)
                     /gene="hisA"
                     /locus_tag="WJK78_000966"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ7597907.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(5426..6064)
                     /gene="hisH"
                     /locus_tag="WJK78_000967"
     CDS             complement(5426..6064)
                     /gene="hisH"
                     /locus_tag="WJK78_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ7597908.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVRTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDPQGYRLKVPHMGWNTVRQTQNHPLFKDIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(6195..7697)
                     /gene="pta"
                     /locus_tag="WJK78_000968"
     CDS             complement(6195..7697)
                     /gene="pta"
                     /locus_tag="WJK78_000968"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ7597909.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7882..8940)
                     /gene="fbpC"
                     /locus_tag="WJK78_000969"
     CDS             complement(7882..8940)
                     /gene="fbpC"
                     /locus_tag="WJK78_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ7597910.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8961..10478)
                     /gene="fbpB"
                     /locus_tag="WJK78_000970"
     CDS             complement(8961..10478)
                     /gene="fbpB"
                     /locus_tag="WJK78_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ7597911.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(10546..11541)
                     /gene="fbpA"
                     /locus_tag="WJK78_000971"
     CDS             complement(10546..11541)
                     /gene="fbpA"
                     /locus_tag="WJK78_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ7597912.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
BASE COUNT         2459 a         2783 c         3563 g         2839 t
ORIGIN      
        1 cggacaccaa atatcaaata tatatatcag gataaccaag gattgtcaga ggcgagaaat
       61 accggaataa aaaattcaaa cggaaaatat atagtcttta ttgattcgga tgattttatt
      121 aattgtcagg tcttgctgga ttttcttagt aaagatgata ttgatatgcc ggatgtggtt
      181 tttttaaatg cagttaaata tgataaggga agtgtttcat attttggcga agattatcag
      241 cctgaaaaaa tactcaatca atccaaagtc gaagttttga aaggattatg ccgatttaga
      301 aaatttccgg gttcggcgtg gaataagatt ataaaaagag aattgattat taaagaaaaa
      361 ctgttttttg aaaagggaat ttattctgaa gatgtcgaat ggtcaatgag attatttaat
      421 gcggcaacaa ctttttctta tttggacggt tgttattact attatcggca gggaagagaa
      481 gattctatta cgggaactgt ttcggaaaaa agtataaagt cattattata tattttggag
      541 aaaaatgcgg aaatggaatt taatagggat atatcaagtt atctttattc ttttctttcc
      601 tacgaatatc tcgttttgct ttttatcatg acgagtaaaa atatagcgtg tgatgctgat
      661 ataaaaagaa gggcgtatca tttaaggttt atgctgttaa agtccaataa attgatatat
      721 aagctgatat tcccgataat cacattattc ggggttgata ttacaggcag gattttaaaa
      781 gcaatcaggg ggaatattta ataaatcctt taacactata catcttaccg aaggaggaaa
      841 aatgaacgca atccgaactt tccaaaaccg cacgcccgaa atccacgaaa gctgtatgat
      901 agacgaagcg tgcgtcgtca tcggcgaagt gtcgcttgcc gaagacgttt ccgtgtggcc
      961 gtgcgccgtg ttgcgcggcg atgtgaacag catcaccgtc ggcgcgcgca gcaatataca
     1021 ggacggcagc gtcctgcacg tttcccacaa aaccgccgcc aaacccgaag ggtcgccgct
     1081 ggttatcggc gaagacgtta ccgtggggca caaagtgatg ctgcacggct gccgtatcgg
     1141 caaccgcgtc ctggtcggca tggggacgac ggttctggac gatgccgtga ttgaggacga
     1201 agtgatgatt ggcgcgggca gcctcgttcc gccgcgtaaa cgtttggagg gtggctatct
     1261 ttatgtcggt tcgccggtca gacaagtgcg cgtgctgacc gatgaggaaa aagccttttt
     1321 gaaatattcc gccgcgcatt atgtgaagct gtcgaaacag tacgggatgt gaaatcacat
     1381 cggcgttctt gcgtcagccc caaattcatg cggacgggac gcatccgata acggtatccg
     1441 atgcgccttg attttgaccg actgcgtttg ggttgcaggc aaaaatgccg tctgaaagcc
     1501 ttttttcggg ttcagacggc attttattgc cgattgcttt ttaaagtttg accgaatgct
     1561 cgcgcgtttc gtggaacacg atgtccggcc aacgttcttg cgtcagccct aaattcatgc
     1621 ggacgggatg cccgatagcg gtatccgatg cgccttgatt ttgaccgtct gcgtttgagt
     1681 tgcaggcaaa aatgccgtct gaagcccttt tttcgggttt agacggcatt ttattgccga
     1741 ttgcttttta aagtttgacc gaatgctcgc gcgtttcgtg gaacacgatg tccggccagc
     1801 gttcttgcgt gagtcccaga ttcacgcggt tgggggcgag gtaggcgagg ttgccgcccg
     1861 cgtcgatggc gaggttgccc gcgttggctt tttcaaattc cgccagtttt ttcttgtcgt
     1921 cgcacgatac ccagcgcgcc gaccagatgg atgcgctgtc gaacacggct tccacgccgt
     1981 attcgttggc aaggcgcgag gtaacgactt caaactgcaa cacgccgacc gcgcccaaaa
     2041 tcaaatccgc gccgctcatt ggtttgaaca cctgtaccgc gccttcttcg ccgagttgtt
     2101 gcaagccttt ttgcagttgc ttgattttca gcgggttttt gatgcggacg ctgcggaaca
     2161 gttcgggcgc gaagaatggg atgccggtga acgccagttg ttcgccttcg gagaagctgt
     2221 cgccgatttg gatgttgccg tggttcggga tgccgatgat gtcgccggcg taggcttctt
     2281 ccaccagctc gcggtcgtgc gacatgaagg ttaccacgct ggaggcggcg atttcgcggt
     2341 tgatgcgaag gtgtttcatc ttcataccgc gctcgaatct gccggagcag acgcgcagga
     2401 aggcgatgcg gtcgcggtgt ttcggatcca tattggcttg gattttaaag ataaatccgg
     2461 agaatttcgg ctcgtccggc tcgaccatac gtacggtcgc gtcgcgcggt ttcggcgcgg
     2521 gcgtccagtc aatcaatgaa ttgaggattt cctgaatacc gaagttgtta atcgcagagc
     2581 cgaagaatac gggcgtgagt tcgccggcga ggaattcgtc gagattaaac tcgttggaag
     2641 ccgcctgcac caattcgatt tcgtcgcgca actgctggat ttccaatgga aagcgttgtt
     2701 ccaattcggg attgtcgatg cctttgatga tgtcgaactc gtgcggcaga cgttcgccac
     2761 cggcttcaaa gagatagatt tcgtcgttca ggatgtggta cacgcctttg aagtttttgc
     2821 ccatgccgat cggccaggtt acgggcgcgc agcggatttg caggatgttt tccacttcgt
     2881 ccagcaactc caaagaatcg cgcacttcgc ggtcgtattt gttcatgaac gtgacaatcg
     2941 gcgtattgcg caggcggcag acgttcaaga gtttgatggt ttgcgcttcc acaccttttg
     3001 ccgcgtcgat gaccatcaac gcgctgtcca cggcggtcag aacgcggtag gtgtcttcgg
     3061 agaagtcttg gtgtcccggc gtgtccaaga ggttgacggt gtggtctttg tagtcgaact
     3121 gcatcacgct tgatgccacg gaaatgccgc gctgcttctc gatgtccatc cagtcggagg
     3181 tggcgaattt gccggttttt ttgcctttta ccgtacccgc gctctgaatc gcgcccgaaa
     3241 acagcaacag cttttcggtc agcgtggttt tacccgcgtc ggggtgggag atgatggcaa
     3301 acgtgcggcg gcggcgcact tggtcgagga tttcttggga catggttttc tttgcaaaaa
     3361 ggttcaggcc gcttttcaga cggcccggac agtgtttgag acggcgaaat tgtacaaaaa
     3421 aatgcctgat aattcaatgt tggaggcggt cagtgcgtgc tgccgtaaat ctctttttcg
     3481 tctttcagga cggcatcggc ggtttcccac gcgccgccgc gccagacttt gtaaaagcag
     3541 ctttctcgcc cggtgtggca ggcgatgccg ccgttttggg cgatgagcat cacaatggcg
     3601 tcgccgtcgc agtcgaggcg cagttcgcgg actttttgcg tgtgtcccga ctcttcgccc
     3661 ttcatccatt gtttttggcg cgaacggctg taatagtggg caaagccggt ttcgacggtt
     3721 ttttgcaggg cttcggcgtt catccacgct accattaaaa cacgtttggt ttcggcatct
     3781 tgggcgatgg cgcaaaccaa acctttttcg tcaaatttga cggcttcaag caggttttta
     3841 tccatatttc ctttcagacg gcatggtcgg ggcggtcaga ggcgcacttc gatgccggct
     3901 tcgcgcatag cgcgtttggc ttcgcggatg gcgatttccc cgaaatggaa aacgccggcg
     3961 gcaagtacgg catcggcttt gccttcggtt atgccttcaa tcaggtgccg gacattgccg
     4021 acccctccgg aggcgatgac ggggatgtcg acggcttcgg caacggcgcg ggtcagcggc
     4081 aggttgaaac cctgtttcgt accgtccctg tccatcccgg tgagcaggat ttcgcccgcg
     4141 ccgcgttttt gcatttcgat cgcccattcc accgcatcca aaccggtcgg attgcgcccg
     4201 ccgtgggtaa agatttccca gcgtgtgttt tcggagttga cggctttggc atcgacggcg
     4261 gcgacgatgg cttgcgaacc gaaaaatccg gcggcttcgt caatcaggtc gggacgggta
     4321 acggcggcgg tgttgatgct gactttgtcc gcgccggcat tgagcaggcg gcggatgtcg
     4381 gcaacggtgc gtacgccgcc gccgacggtc agggggatga agacttgtcc ggcaacctct
     4441 tcgatgatgt gcaggatggt gtcgcggttg tcggatgagg cggtgatgtc gaggaaggtc
     4501 aattcgtccg cgccttcgcc gttgtagcgt ttggcggctt cgacggggtc gcccgcgtcg
     4561 cgcaaaccga tgaagttcac gcctttgacg acgcgcccgt cttttacgtc gagacagggg
     4621 atgatgcgtt ttgccagtgc cataatcgga tgcctttagt cgagggaatc tgccagttgt
     4681 tgcgcttggg caaaatcgat gctgccctcg taaatcgcgc ggccggtaat cgcgcctgct
     4741 acgccatgtt tttcggcggc acacagggcg cggatgtcgt ccaagccggt cagtccgccg
     4801 gaggcgatga cgggaatgcg gacggcttgg gcgagtttga ccgtcgcgtc gatgttcacg
     4861 ccgctcatca taccgtcgcg cccgatgtcg gtgtagatga tgctgttgac gccgtcgtct
     4921 tcaaagcgtt ttgccaaatc aattacatga tgcccggtta cggttgccca gccgtcgatg
     4981 gcggccatac cgtctttggc atccagcccg acaataatcc tgccggggaa ggctttgcac
     5041 gcctcgcgca cgaagtcggg gtttttgacc gccgccgtgc cgataatcac gtcgtttaag
     5101 cccaaatcca aatattgtcc gatggttttc aaatcgcgta tgccgccgcc gagctgtacg
     5161 gggatgtctt tggcgacagc ggcaaggatg tctttgatgg cgggcaggtt ttgcggaacg
     5221 ccggcaaacg cgccgttcaa atctaccaga tgcaggcggc gcgcgccttg tttgaaccag
     5281 tgcagcgcgg tttcggcggg cgaatcggaa aagacggtcg cctcttccat cagcccttgt
     5341 ttcaggcgga cgcagcgtcc ttctttcaaa tcgatggcgg gtatcagcag cataattttt
     5401 ctccttgtgc ggggccgtgt ccggcttacc agtttaaaaa gtttttcaac atcgtcagcc
     5461 cggcatcgtg gcttttttcg gtgtgaaatt gcgtggcgaa tacgttgtct ttgccgacga
     5521 tgcaggcaaa cggggacggg tagtcgcttt cgcccaatat ggtttcggga ttttcggggg
     5581 cgaaatagta gctgtggacg aagtaaaaac gcgtgtcttg gggaatatct ttaaacagcg
     5641 ggtggttttg ggtttggcgc acggtgttcc agcccatatg cgggactttc agacggtatc
     5701 cctgcgggtc gcggaggtcg cgctcaaagc gtctgacttt gccgccgaac cagcccaagc
     5761 cgtcggtgtt tccttcttca ctgtggtcga ataaaagttg cgcgccgacg cagattccga
     5821 aaaagggttt gttttttaag gcatctttga ctgcctcgtc caggccgccg cgcgtcagtg
     5881 ccgccataca gtcgggcatc gcgccctgcc cgggaaaaat gactttgtcg gcgcgggaca
     5941 cgcgttcggg gtcgccgctt aaaaagattt cggtattttt tccggcaagc tgccccgccg
     6001 tccggacgga tttcaatacg gaatgcaggt tgcccatacc gtaatcgata atggcgattt
     6061 gcatggcttc ctcctctttt tttgcaatat ggctgcgatt ttaacaaaca aatgtgccgt
     6121 gctgataaaa atgccgtctg aaaacgggag tctgtcttca gacggcatag ggttcaaacc
     6181 cggaaagccg tttgtcagcc ttccatttgt tttgcctgaa cggcagtcag ggcgatggtg
     6241 aacacgatgt cttccaccag cgcgccgcgc gacaggtcgt tgaccggttt gcgcaggcct
     6301 tgcagcagcg ggccgacgct taagacgttg gcactgcgtt ggacggcttt ataggtgcag
     6361 ttgccggtgt tcaggtcggg gaagaccaaa acggttgcct gtcctgccac cgggctgccc
     6421 ggggctttgg atttgcccac gcccggcacg gttgccgcat catattgcag cgggccgtcg
     6481 atggcgaggt cggggcgttt ttcccgggca agtttggttg cttcgatgac ggtatcgaca
     6541 tcggggccgc tgccggagtt gacggtggag taggaaatca tcgccacttt cgggtcgatg
     6601 ccgaaggctt ttgcggaatc ggcagactgg atggcgatgt cggcaagctg ttgcgcggtc
     6661 gggttcggat taaccgcgca gtcgccgaag acgaggactt ggttgggcag cagcataaag
     6721 aatacgctgg acacgaggct tgcgcccggt gcggttttaa tcagttgcaa agcggggcgg
     6781 atggtgttgg cggtggtgtg aaccgcaccg gataccaaac cgtccacatc attttgcgcc
     6841 atcatcatcg taccgagtac cacggtgtct tgcagttgct tgcgcgcgtc ttcgggtgtc
     6901 aggcctttgg atttgcgcag ttcgcacatc ggctcgacgt attgttcgac caatgaggcg
     6961 ggatcgatga tttccaaaga gtcgggcagg ctgatgccgc gttctttggc aacggcttcg
     7021 acttcttcgc gtttggcaag caggacgcag cgggcaatgc ctttttcgtg gcagatggcg
     7081 gcggcttgga cggtgcgggg ttctgcgccc tcaggcagga cgatgcgttt gtcggcttgg
     7141 cgggcgaagt cgatcaggtt gtagcggaat tgcgccggcg acaggcgttt tgcttcgcgg
     7201 cctgccaata cggatacgtc tttcagcgcg tcgctcgaac cgaagaaggt caggccggtt
     7261 ttttcggctg ccgcttcggc aacggaggct gccgcgccgt ccacgacaaa accttccaat
     7321 acgcccggcg cggcggcgaa gaactgtttg gcaaggttca gccgatttgc cagttcgtcg
     7381 gcatcggcgt tgtcggaacg gacggcgaag acggctgccg cgtcaaggga caatgccagt
     7441 tcgacgtttt tgcctgcgag gtagattttg tcggcatcgg gcgcgatgcc ttcgatgacg
     7501 aggttggcgg catcgagtgc ggcaactttg ccgaccagtg cgtcgaacca gtcgtcgctt
     7561 ttgccttgcg cgagcagggt ttcggcggtt gcgtcaacgg cttggaaaat ttgtgcgtcc
     7621 agtgcttttg caaaggcttg tgcggcggcg gaggcgtcca gtccggcaga tacgggtacg
     7681 atgagtactt ttgccatgat atatcctttc gtatgctgcg gtgtgcggca tatgtggttg
     7741 gaaggggcgg catataggca gaaacggctg cctgcgtgcc gtgcgtgccg tgtttggctt
     7801 gaggcgcgca ggttgaatat agcaaacaaa ttctgtttcc aacaagataa atatccgcag
     7861 gcttgtggat gctgccgcct ttcagagggt atttccgggg aagaacaggg cgggaccgtc
     7921 caaatggagg acggcggaaa tgccgtctga cagggtgggg gcggaaggga ggttgagcgt
     7981 gaggacggtt tgtccgaccc ggagactgat ttcggtatgc cgcgctttgg gcgtggtttt
     8041 gagaaccacg gcgtgaatgg aggcggtggg tgcggaatgg gggtgaaggc tgaactgttc
     8101 cggacggatg agcagtgtgc cgcgtgtgcc tgcgggtgcg ccgctttgaa cgggcaggcg
     8161 gcccaatccg caatcggcgg tgccgtcggc gttgagcgcg gcggggaaca cgatgccttc
     8221 gccgataaac agggcggcat caaggtcggc aggttgtcgg tacaattcgt gagggcttgc
     8281 agtttggagg atgcgcccct gtttcatcac ggcaatccgg tcggcgtatt gcagggcttc
     8341 ttcgcggtcg tggctgacga aaacggcaga tttgccgttg gcgcgcaggg cggcaatcat
     8401 gtcttcgcga atctggcggc gcaactgttc gtccagcgcg ctgaagggtt cgtccaacaa
     8461 aatcagttcg ggatcgggtg caagggcgcg ggcgagggcg acgcgctgtt gctgtccgcc
     8521 cgaaagttcg tgcggatagc gtccggcaag ttcggaaatg ccggtcaatt ccaacatagc
     8581 ttcgatgcgc tgccgttctt gcgccgtctt gcctttcccg ttgcccagcc cgtaggcggt
     8641 gttgcggtaa acggtcaggt gggggaacag cacaccttcc tgtacgacat aacccaaacg
     8701 gcgttcgcgg acggggaggt tggtattttt cgagaagatg gttctgccgg aaagcgaaat
     8761 ttcgccaaaa tcgggttgtt caaaaccggc aaggcagcgt aaaagggtgg ttttgccgca
     8821 gccggacgcg ccgacgataa agaggatttc gcccgggtcg aggctgagcg aaatgtcgtt
     8881 taaaactggg gtgttttgaa aacttttgga caggtgtccg atgtgcaggg cggcggtcat
     8941 ggcggtactt cctcaagctg ttatttgaag gcgtatttct tcagcaggaa tacggggatg
     9001 ccggaaaata ataccagcat cagcgcgtaa ggggtggcgg cggcgtattg tgcgtccgat
     9061 gtgtattccc aaacggcggt ggagagtgtg tggacatcgt cggtggtcag cagcagggtg
     9121 gcggtcagct ctttcatcag tttgaggaag acgagtgcga atgcggcggt aatgccgggc
     9181 aggatggacg gcagtaccaa cgtcctgaaa ataaagaagt gtccgcgccc caatgttgcg
     9241 ccgacctgtt ccatcccttt ggggagttgt tccaaggaag tcctcagggt ggtttgcgcc
     9301 atcggcaggt aaagcatgaa ataggcaagg atgacgacga taaaggtttg gtaaacggca
     9361 ggggtgtagt tgatgctgaa ataaaccaag gatagggcga taaccaaacc ggggacggcg
     9421 tgcagtaaaa acggcagcct gtctatccaa acggttaaaa aattgcgata gcgaaccgat
     9481 gcccaaacaa ggggcaaggc acataatata gtcaaaatcg cacctaaagc cgatacgctt
     9541 aaggaacgga taaaggcatc aaatacggat acgagcgcga atgtgccgga agtgccgacc
     9601 atcatccaat gtatcaatac gccaaagggg ataataatgc ccaaagtcaa caagctgctt
     9661 aaaaaaacaa tcgcgccgat ctgaccgggc agtttgaggg ttttgacggg ataaggacgg
     9721 gcaacgcctt tgccgctgtg gtaaatcttg gctttgccgc gaaatatgct ttctccaaat
     9781 acgacgatgc cgcacaccgc cattaaaaca gcggaaagca gggcggcggt attgttgttg
     9841 taggacattt cgtattcttg gaaaatggcg gtggtaaaag tggggtagtt caaaatagat
     9901 accgcgccaa attcgaccag catatgcagg gcaatcagta acacgctgct gccgatggcg
     9961 ggtttgagct gggggaggat ggcggaaaaa aaggtttgca ggcggctttt gcccaaggac
    10021 aggctgactt cttcgtaaga caggctgatg cgtttgagtg ccgcctcgac gggcaggtag
    10081 gcgagcggga acgaggacag gctcataatc atcactgtcc cccaaaagcc ttcgacacgg
    10141 aaggtcaggc tgatccaggt gaaacagctg acaaatgcgg ggatgcacaa aggcagggtg
    10201 attgccgtct gaaaaaaggt tttgccgaag aagcggtaac gttggaacaa aagggcgcag
    10261 gcaatgccca aaacaatgga aatcagggta acgcccgcca tcatcgtcaa ggtgttggag
    10321 agcaaatccc acatacgcgg gcggaacaac agttcgacgg cgcggttgat gccgacctgc
    10381 cacgaacgca tagcgacata taaaaaaggc agggtaagcg gtagggcaat cagtaggatg
    10441 aggccggtaa gccaaatggg tattttttta ggagacatag tgtttttcat cggcaaaacg
    10501 ggcggacagt ataaatgtcc acccgtttga caatccgaaa acggcttatt tcataccggc
    10561 ttgctcaagc agccgggtgg cgtgttcttt ttcggaaaca gtggtggcgg acacttgggg
    10621 tgcttccaac ttggcgatgg gttccaaatt gaaagtggat accacgtgcg gattcaaagg
    10681 atattcggca cggacggcgg tcagggcgcg ctgtccttcc ttgctggcga ggaaggcgac
    10741 gaattttttc gcctcatcct tgttttggga ggattttaac acggctgcgc cggaataggt
    10801 aacgagtgcg ccgggatctc tgtggcggac gaaattcagg cgggtgtgga cattttgtac
    10861 gcctttttca cgcgcaaaag cgtgccagta gtagttgttg atgagggcgg catcgatttc
    10921 gccgttttca accgcttgaa gggcgacgga gtttttagcg taaggcttgc cgtattcttt
    10981 cagacctttg agccatttca atgcggccgc ttcgcctttc agtttgacga tggcgacaac
    11041 ctgttccaag aacgcgccgg aagtgggggc gtaaccgatg cggtttttcc atttcggcgt
    11101 ggcgtaattc aggacggatt tttccaaatc tttttcagac agtttgcggg tgtcgtaaac
    11161 gacgacgcgc gaacgtccgc tcagtgccac ccagtctttt ttggcggcaa ccggcacgcc
    11221 cttgccgcgt gtttcgttga tggtggaggc gggcaggggc tctaggaggt tggctgcgga
    11281 aagggtggcg agtgccggga tttgttcgga atagaatacg tcggcggggc ttcggctgcc
    11341 ttcttctttg atttgaccgg caagctggtc gcctttggcg ctgttgagtt tgactttgat
    11401 gccggtagcc cgggtaaagg catctgcaac ggcttgtgcc gcttctttgt gttggccgtt
    11461 gtacacggta atgtctgcca gcgcgggggt tgcggcggtc agggctgcgg caagcagtgc
    11521 gtatcggata gatgttttca tatcgatttt ctcctaatga atgagagtgt acaccttgtt
    11581 aagacataac ggcgtgtagt gtattccttc ttctttataa atgcaaataa ttatttttta
    11641 aatt
//
LOCUS       DAWKOX010000050        11606 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.050, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000050 DAWKOX010000000
VERSION     DAWKOX010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11606
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.050"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(171..863)
                     /locus_tag="WJK78_000972"
     CDS             complement(171..863)
                     /locus_tag="WJK78_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ7597913.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGAPKYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(971..2164)
                     /locus_tag="WJK78_000973"
     CDS             complement(971..2164)
                     /locus_tag="WJK78_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ7597914.1"
                     /translation="MSDQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2293..3030)
                     /gene="pxpA"
                     /locus_tag="WJK78_000974"
     CDS             complement(2293..3030)
                     /gene="pxpA"
                     /locus_tag="WJK78_000974"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ7597915.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGRVKAVNGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3017..3946)
                     /locus_tag="WJK78_000975"
     CDS             complement(3017..3946)
                     /locus_tag="WJK78_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ7597916.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3943..4590)
                     /gene="pxpB"
                     /locus_tag="WJK78_000976"
     CDS             complement(3943..4590)
                     /gene="pxpB"
                     /locus_tag="WJK78_000976"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ7597917.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4774..6981
                     /gene="uvrD"
                     /locus_tag="WJK78_000977"
     CDS             4774..6981
                     /gene="uvrD"
                     /locus_tag="WJK78_000977"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ7597918.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKVVAFVRLIEALRNQVGQMPLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNATLESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7338..7877
                     /locus_tag="WJK78_000978"
     CDS             7338..7877
                     /locus_tag="WJK78_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ7597919.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYQEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAENHVQICEVSGIGFEKEGSLCGETGQK
                     LWLEEWEYPPIGVYFANDPSGGHAMFALDYRACGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8067..8282)
                     /locus_tag="WJK78_000979"
     CDS             complement(8067..8282)
                     /locus_tag="WJK78_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597920.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8290..8493)
                     /locus_tag="WJK78_000980"
     CDS             complement(8290..8493)
                     /locus_tag="WJK78_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597921.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(8406..8765)
                     /locus_tag="WJK78_000981"
     CDS             complement(8406..8765)
                     /locus_tag="WJK78_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ7597922.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8818..9165
                     /locus_tag="WJK78_000982"
     CDS             8818..9165
                     /locus_tag="WJK78_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7597923.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWNRAKRHLRKFNGIPKAHFELYLKECEW
                     RFNNSEIKVLVPF"
     gene            9393..10013
                     /locus_tag="WJK78_000983"
     CDS             9393..10013
                     /locus_tag="WJK78_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ7597924.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGILYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            10036..11487
                     /locus_tag="WJK78_000984"
     CDS             10036..11487
                     /locus_tag="WJK78_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ7597925.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
BASE COUNT         2845 a         3071 c         2840 g         2850 t
ORIGIN      
        1 tttcagttac agcagcttga tccctttccc ttatccaacg ggggaaggct aggatagggt
       61 ggcttgcaaa tatacagaac aagggacaag agccaccctc tctccaaccc tctccctccg
      121 tacgggaggg ggtggattct cgcgggcgaa gcccacgcta cggttagcct ttaccccagc
      181 acaaacaatt cccgcccgtg cgccttcagc caacttttag cattgtcggt atgcggcgtc
      241 agcgtgttca ccaaatgcca aaagcgcgga ctgtggtcgg ggtggcggag gtggcagagt
      301 tcgtggatgc agacatagtc ggcaacgtac ttgggcgcgc cgatcagccg ccagttgagg
      361 cggatgccgg tgtgcgggcg gcatacgccc caaaaggttt tggcgttgct caggtctgtg
      421 gcggtgggcg tcagtcctgt ttcggctgcg tgtttttcaa ggcggggcag caggtattcg
      481 cgggcgcgtt cgttcaacag gcggcgcagg tggtcgattt gtgcggcggt ttcttttcgg
      541 ggaagcagga tttcagacga cgtgatacgg atatggcttt ggctgtgggt atccagcttg
      601 gtctttattc cccgatacca aatccactcg ggtaagtttg ggtgggaaac aggatgcacg
      661 ggcgttttgg caagcgtgtt ccgcaaaatc gtttcgtttg ccgccagcca gtttgctaac
      721 gcgtggtctt gaaaaaaggg tgggacgttg atgctgaccg tctgcatatt gacggggcgc
      781 agaatcagat ttttcttggc actgcgtttg agttcgattt cgatgcacaa gccgtcggaa
      841 agagtatagg tgaagcgttt catagttgtg aataggtttc agaccggata catcgtctga
      901 aacaggaatt ttccatatca ggcggcaaac ttcggataat atacaaaatc aaacatctgc
      961 gctacaaggt tcagccgaac aagccgccga tatatttgct gatggtgatg gcgctgagta
     1021 ctgccatcaa accgaccaca atcacgccgg aaacggtgag ccacagcggg tgtttgtagt
     1081 cgccgacaat tttggttttg taggcggcaa tcagaatcag accgagggaa atcggtaaaa
     1141 tcaggccgtt taatgcgcct acgaacacca gcacctgcgc cggtttgccg atggtggaaa
     1201 atacggcggt ggacacggcg ataaaggcaa taatccattt gtttttattg cgttcgatag
     1261 acgggctgag accggagaag aacgacaccg aagtataagc cgcaccaatc accgaagtaa
     1321 tcgaagccgc ccaaatcacc acgccgaaaa tcagcaggcc gatgtatccc gccgcatatt
     1381 caaacggtgt ggaagcaggg ttgtcgggat tgagctgtac gccttggctg accacgccca
     1441 aaaccgccaa aaacaataca atccgcataa tcgaggcaat caggatcgcc cgcaccgagc
     1501 tttggctcac ttccggcaac gccgatttgc ctttgatgcc tgcgtccagc agacggtgcg
     1561 caccggcgaa ggtgatgtag ccgccgaccg tgccgcccac cagtgtaaca atcgccattg
     1621 catcgagttt ttccggcata aaggtatgca cggcggcatc tgccagcggc ggattcgcct
     1681 gccatgccac ataaaccgtc agcgcaatca ttacgaaacc catcacttgg gcgaatttgt
     1741 ccatcacttt gcctgcttct ttaaacagaa acacaccgat ggcaatcacg ccgctgatca
     1801 cggcaccggt ttccggcgac agtccggtca gcaggttcag acccaagcct gcgccgccga
     1861 cgttgccaat attgaacgcc aaaccgccca tcacaatcag cacagccaag aaatagcctg
     1921 cgccgggcaa gacctgattg gcaatatcct gcgcctgttt ttcggaaacg gcgacaatcc
     1981 gccaaatatt gagctgcgcc ccgatgtcga gcagaatcga gagcagaatc acaaagccga
     2041 aacttgccgc cagtgcttgg gtgaaggtgg cggtttgggt cagaaagccc gggccgatgg
     2101 cggaagtcgc catcaggaat gcagcgccga ttaaggcatt tctgcggttt ttttgatcag
     2161 acataatcgc ttatcctcta taaaattggt tgttgctgtg tttgggcgaa acctgcggtt
     2221 ttagctacgc agaaactcgc tttgctcgtt ttggcgaaac ctgcggtttt cagacggcct
     2281 atgaactgtt tttcaagcag aaactttgat gcctgccgcc agtagttcct gccggatttt
     2341 ttcggcaaac accacggcgt gcggcccgtc tccgtgcaga cagatgctgt cggcttgcac
     2401 ggcaaccagg ctgccgttca ctgctttgac ccgcccgtcc cgcaccatct gcaatacttg
     2461 ggcgatggct tcttcgtcgc tgtcaacctg cgcatcgggg cggctgcggg gaaccagcgt
     2521 accgtcgggc atatagcggc ggtcggcgaa tacttcggaa atcacaccca agcctgcggc
     2581 ttttccggct tccaagagca ggctgccgga aagtgccatc aatttcaatt tcgggtcgaa
     2641 atccgccaca attcgggcaa cggtatccgc cagcgcacgg tttttcgccg cttggttgta
     2701 cattgcgccg tgcggtttga cataagccat ttccaaaccc tgatcacggc acaaggcctg
     2761 caatgcgccc aactggtaat tcagacacgc ccgcaaatcg gcttcggaca gattcatttc
     2821 ggtacggccg aagttttccc gatcgggata gccggggtgt gctccgatgc gcacgccgtt
     2881 ttgttgggca tacgccaatg ccgcccgaat atcggcaatg ctgccggcgt gttgggcgca
     2941 ggcgatgttg gccgaagtaa tcagctgcaa caaggcttcg tcgctgccgc agccttcggc
     3001 gagatcggcg tttaaatcaa cctgcttcat gggtgattct ccgtatttgg ttcagatagg
     3061 cttggttttt gcgccgcagg gcggtggctt ctttcaagcc gattattttg aatttgactt
     3121 tgctgccgaa gcgcacctgt gccagcctgc ccaaatcggc ggcggcaacg gtagcgattt
     3181 tcggataacc gccggtggtt tgtgcatcgg ccagcaggat aatcggtttg ccgccgggcg
     3241 gcacctgcac ggttcctgcc tgaacagcgt gggacagcat ttccaaaggt tgcgacaggg
     3301 tcagcggctg tccgtcgaag cggtagccca tgcggttgct atcgctttgc agcgtccacg
     3361 tttcccgttc cagattcaga cgcccttttt cactgaaagc ggcatattcc gacgaaggaa
     3421 caaggtggac ggtatcggta aacggtatcg gggcaatgcc gactttggac aattcctgcg
     3481 cacctttgcc gatggggaga taatcgcctt tttgcagcat tctgccctga tggccgccga
     3541 aaccggcttt caggtcggta cttctcgaac ccatcacttc cggcacatca aatccgcccg
     3601 ccacgcacac atagccgtac atgccctgca cggcacgcac cattttcaag gtctgccctt
     3661 tgcgggcggt ataacgccaa tacgaataga ccggttcgcc gtccaattcc gcctgataca
     3721 cggcaccggt gagacaaaac ggcgtatccc gttcaaacac cagcattatc ccgcccaaag
     3781 cgatttcgat tgcggccgtg ccttcgtcgt tgcccaataa aatattaccc gccgccaaag
     3841 caaccgtgtc catcgcaccg gcatgaccga tgccgtaacg ccggtgtccg tagcgtccgg
     3901 tatcctgaat atgcgccggt gcctgcactg ccgaaacgtg aatcatggct caatcctttc
     3961 tgcaacaaag cggacttggt cacccgccgc cagcagggtc ggcggattca aatcggctcg
     4021 gaacaagggt aattcggttc tgccgataat ctgccagccg ccgggcgaag cgaacggata
     4081 cacaccggtc tgactgccgc cgataccgac cgaaccggca ggaacggacg ttctcggcac
     4141 ggcacggcgg ggcgtgtgca atgcttcggg caagccgccc agataaggga aaccgggctg
     4201 gaagcccatc ataaatacgg tataagtttg cgccgtatgg cggcggacga tttcggaaat
     4261 aaccgtctga tggaaagcag cgacttccgc caaatccggg ccgtattcgc cgccgtagca
     4321 gacgggaatt tccaccagtt tgccctgatg gtctgtaacg gcggtgtgtt cccacacata
     4381 ttgcaattca tcggcaagcg tcgccaaatc ggtatcgaaa cgggtaaaca cggtcagatt
     4441 gttcatgccg accaccactt cctcaatcct gtcgtgctgc ccgagcgcag cggcaaacgc
     4501 ccacaacttt tgctgtttgc ccagttcgga aggcgcattc agtcggcaga ccaaagcgga
     4561 ttcgctgatt ggtgtgatct ctattctcat ttgttgttca ttttggttat gttttaatga
     4621 atctatatgc aggggcggcg gtttgtcaat atcttctgtg ctgcatcatc aaaccgtcga
     4681 ttggaaaagt gctgccctgc cgctgcactt tttcagacga ccttaaaccg tttctattaa
     4741 aatagcgcat tccacttttc agacggcatc cttatgtttc ccgaccaatc cgcccccaac
     4801 ctgctgcaag gcttgaatcc cgaacaactc tccgccgtaa cctggccgcc gcaatccgca
     4861 cttgtgctgg cgggcgcggg cagcggcaaa acgcgcgtgc tgaccacgcg catcgcatgg
     4921 ctgttgcaaa ccggtcaggc aagcgtgcac agcattatgg cggtaacgtt taccaacaaa
     4981 gccgccaaag aaatgcaaac ccgtttgggc gcgatgattc ccatcaatgt ccgcgccatg
     5041 tggctcggca cgttccacgg cctctgccac cgctttttgc gcctgcacca ccgcgatgcc
     5101 ggtctgccgt catcctttca aatcctcgac agcggcgacc aactttccct catcaaacgc
     5161 ctgctcaaaa gcctcaacat cgccgaagaa atcatcgcgc cgcgttcgct gcaaggcttt
     5221 atcaacgcgc aaaaagaatc cggtttgcgc gcttccgtgt tgagcgcgcc cgatccgcac
     5281 acaagccgca tgatcgaatg ctacgccgaa tacgacaaaa tctgccaacg cgaaggcgtg
     5341 gtcgatttcg ccgagcttat gctccgcagc tacgaaatgc tgcaaagcaa cgaaatcctg
     5401 cgccagcatt accaaaaccg cttcaaccac attctcgtcg acgagttcca agacaccaac
     5461 aaactgcaat acgcctggct caaactcatg gcgggcggaa acgcagcggt atttgccgtc
     5521 ggcgacgacg accaaagcat ttaccgtttc cgtggcgcaa acgtcggcaa catgaccgcg
     5581 ctgatggaag aattccacat cgacgcgccc gtcaaactcg aacaaaacta ccgctccgtc
     5641 ggcaacatcc ttgccgccgc caatgccgtt atcgaaaaca acgacgaacg actcggcaaa
     5701 aacctgcgca ccgacgccga agcaggcgac aaaattcgct actactccgc ctttaccgac
     5761 ctcgaagaag cccggttcat cgtggacgaa accaaagccc tcgaacgcga aggctgggat
     5821 ttggacgaaa tcgccgtcct ctaccgtagc aacgcccaat cccgcgttat cgaacaaagc
     5881 ctgttccgca gcggcatccc ctacaaaatc tacggcggct tgcgctttta cgaacgccaa
     5941 gaaatcaaac acgccctcgc ctacctgcgc ctcgccgtca atcccgacga cgacaacgcc
     6001 ctcttgcgtg tcatcaactt cccaccgcgc ggcatcggtg cacgtaccgt cgaaaatctt
     6061 cagacggcct caaacgaaca aggcatcacc ctctggcaag ccgcctgcaa cgccggcgcg
     6121 aaagccgcca aagtcgtcgc cttcgtccgc ctgattgaag ccctgcgcaa ccaagtcgga
     6181 caaatgcccc tgtccgaaat catcgtcggc atcctcaaag acagtggctt gaccgaacac
     6241 taccgcaccc aaaaaggcga caaccaagac cgcctcgaca accttgacga actcgtcaac
     6301 gccgccatcg agttcaaacc agaagacagc aactttgaaa ccctgcctga aaacatttca
     6361 gacgatcccg ccttccccat cctcgctttc ttgagcaacg ccaccctcga atccggcgaa
     6421 aatcaagcag gtgcaggcga aaaagccgtc caactcatga ccgtccacgc cgccaaaggc
     6481 ttggaattta acgccgtctt cctcaccggt atggaagaag gccgcttccc cagcgaaatg
     6541 agtctcgccg aacgcggcgg cctcgaagaa gaacgccgcc tcatgtacgt cgccatcacc
     6601 cgcgcccgca aacgcctcta catcaccatg gcgcaacaac gcatgctgca cggacaaacc
     6661 caattcggca tcgtctcccg cttcgtcgaa gagatcccac ccgaagtatt gcactacctg
     6721 tccgtcaaaa agaccgccta cgacagctac ggcagcccgc gccaaaccgc cgcatccaaa
     6781 gacaaaatca tcgacgacta caaacagccc caaacctacg caggcttccg tatcggacaa
     6841 aacgtccgcc acgccaaatt cggcaccggc gtgattatcg atgccgcaga taaaggcgaa
     6901 tccgcccgac tgaccatcaa cttcggcaaa cagggcgtga aagagttgga taccaagttt
     6961 gcgaaattgg aagcgatgta aatttgaaat gcaggctgga tactcgtatc cgacaaaaat
     7021 atttgacgcg tctatcgttt ccgaaaaacc gctgttggaa aatgtcggat tcgagaatcc
     7081 gacctatggc aaaaaactgt agcaaggaca aggcaaaagg ccgtctgaat ccggtaacaa
     7141 caaattttgc cgaaacctcc gccgtcattc ccgcgcaggc gggaatccag acctttcggc
     7201 acgggaactt atcggataaa aggtttcttt agattccacg ttctagattc ccgcctgcgc
     7261 gggaatgacg gacggtaaaa gccgggtata gatacctaac ccttgtttat agctgaaaat
     7321 caataaggaa gaacattatg tcccaagttt ttaaagattt tgatttgtcc tccgtatggg
     7381 aatccgacag ttgggcagat gaaaactacc aagaagcccc gtttacccct gaaattttgg
     7441 ctgccgtaga aagtgaactg ggctataaat tgccgcaaag ttttattgaa ttgatggcgg
     7501 tacaaaacgg cggaatattt gtcaaaaact gttttccgac cacgcagaga aattcgtggg
     7561 cggaaaatca tgtgcaaatt tgcgaggtat cgggcatcgg ctttgaaaaa gaagggagtt
     7621 tgtgcggcga aacagggcaa aaactttggc tggaagaatg ggaatatccg cccatcggcg
     7681 tgtattttgc caacgacccg tcaggcggtc atgccatgtt tgccttggac tatcgggcgt
     7741 gcggcaaaga cggcgagccg aaagtggtgt ttgtcgagca agaatcggat tttgaaatcg
     7801 tcgaacttgc ccccgatttt gaaaccttta tccgcagctt gcggcatgaa gatgagttta
     7861 ttgacgagga aatataaaac ggcggttgaa aaaccggaat catcaaggga aaacgggcga
     7921 aataacggat aatcgcttga atccgtaagg aaaacggttt ggtggaacgc gccatccaag
     7981 acctttgcaa agaaaaactg tctccgacag cattgacatt attaacagaa cttatcaagt
     8041 ttggagctat ctcaaatata attcggttat ccttttgtat ccattaaatc atatgcttca
     8101 attaattgtt gttctagctc ttgtaccaat tttgaattgc gaattcctga cacaatctca
     8161 aattcttctg catctatgca aacacctgca taaatttcaa taacaaggga acgcaataat
     8221 tgaagctctt ctcttgttaa agaaataata atgtcatcac ctgtgtaatt gattatattc
     8281 ataataattt tatttttgtt tgtcaaagta agttttgcct aaggttggtc taaatgcagt
     8341 tccaccatct tttgaatttg ggtctctgat tacaattgct ccagacttat catcccaaat
     8401 tgctcttatg tgtttggatt gtaatcttcg aattcccaag aaaaaaatcg taataagttt
     8461 gaaagtgtca aatcccaagt ttcttttgag caatattcta atattttatc aatttcactt
     8521 ttaataatct tatgatcaaa ctgttctaat attaatgcat tagaccaaaa aaaaccttct
     8581 ttattacaat gatgggaaat ccatttagga gaacaaatgc aaagtgaaaa aatagatgag
     8641 ccttgttctc cttcgattcc gatatccaaa tctatccatc tatggaaatt atctggaatt
     8701 tcgggggtaa atttttcaaa atcaatatca tataaattta tgctttttaa atccaattta
     8761 atcattaggg ctgtcctaga taaataggga aattcaaatt aagttagaat tatccctatg
     8821 agaaaaagtc gtctaagccg gtataaacaa aataaactca ttgagctatt tgtcgcaggt
     8881 gtaactgcaa gaacagcaac agagcctgac agcattgttt atacggattg ttatcgtagc
     8941 tatgatgtat tagatgtgag cgaatttagc catttccgta tcaatcacag cacacatttt
     9001 gctgaacgac aaaaccatat caatggaatt gagaattttt ggaaccgggc aaaacgtcat
     9061 ttacgcaagt ttaacggcat tcccaaagcg cattttgagc tgtatttaaa ggagtgcgaa
     9121 tggcgtttta acaacagtga gataaaagtt cttgttccat tttaaaacaa ttagtaaaat
     9181 cgagtttatc ttagttgtcc aggacagccc cattattttt ataacaccgt gaagccgcac
     9241 agcagtttga acagtgatac gccgtttgcg ggcttacgag tttattttcc cggcctgcag
     9301 tttgagcaat acggtgattt cctacggtta atacaaatgt ttacacattg atacatttca
     9361 tttatagttc cgcctatttg aaaatagaaa atatgaattc gaccgcaagt aaaaccctga
     9421 aaggattgtc gctggtgttt ttcgcctctg gattctgcgc cctgatttac caggtcagct
     9481 ggcagaggct tctattcagt cacataggta tcgatttaag ttcgattact gtcattattt
     9541 ctgtatttat ggtcggcttg ggtgtgggtg cgtatttcgg tggacgcatt gctgaccgtt
     9601 ttccttcaag tatcatcccc ctgttttgca tcgctgaagt atccatcggt ctgttcggtt
     9661 tggtaagcag gggtctgatt tccggcttgg ggcatctttt agttgaggct gatttgccca
     9721 tcatcgctgc tgccaatttc ctcttattgc tgcttcctac ctttatgatg ggcgcgacct
     9781 tgcccttgct gacctgtttt tttaaccgga aaatacataa tgttggcgag tctatcggta
     9841 tcttatattt tttcaacact ttgggtgcgg cactcggatc gcttgccgcc gccgaatttt
     9901 tctacgtctt ttttaccctc tcccaaacca ttgcgctgac agcctgcttt aaccttctga
     9961 ttgctgcttc agtatggctg cgttacagaa aggatggata tagtgaacac taaaccgaat
    10021 actagtttga tttatatgct ttctttcctt agcggcttat tgagcttggg tatagaagtc
    10081 ttgtgggtaa ggatgttttc gttcgcagca cagtccgtgc ctcaggcatt ttcatttact
    10141 cttgcctgtt ttctgaccgg tatcgccgtc ggcgcgtatt ttggcaaacg gatttgccgc
    10201 agccgctttg ttgatattcc ctttatcggg cagtgcttct tgtgggcggg tattgccgac
    10261 tttttgattt tgggtgctgc gtggttgttg acgggttttt ccggcttcgt ccaccacgcc
    10321 ggtatcttca ttaccctgtc tgccgtcgtc agagggttga ttttcccgct cgtacaccat
    10381 gtgggtacgg atggcaacaa atccggacga caggtttcca atgtttattt cgccaacgtt
    10441 gccggcagtg cattgggtcc ggtccttatc ggctttgtga tacttgattt cttgtccacc
    10501 caacagattt acctgctcat ctgtttgatt tctgctgctg tccctttgtt ttgtacactg
    10561 ttccaaaaaa gtctccgact gaatgcagtg tcggtagcag tttccctaat gttcggcatc
    10621 ctcatgttcc tactgccgga ttctgtcttt caaaatattg ctgaccgtcc ggataggctg
    10681 attgaaaaca aacacggcat tgttgcggtt taccatagag atggtgataa ggttgtttat
    10741 ggggcgaatg tatacgacgg cgcatacaat accgatgtat tcaatagtgt caacggcatc
    10801 gaacgtgcct atctgctacc ctccctgaag tctggcatac gccgcatttt cgtcgttgga
    10861 ttgagtacag gttcgtgggc gcgcgtcttg tctgccattc cggaaatgca gtcgatgatc
    10921 gttgcggaaa tcaatccggc ataccgtagc cttatcgcag acgagccgca aatcgccccg
    10981 cttttgcagg acaaacgtgt tgaaattgta ttggatgacg gtaggaaatg gctgcgtcgc
    11041 catcctgatg aaaaattcga cctgattttg atgaatacga cttggtactg gcgtgcctat
    11101 tccaccaacc tgttgagtgc ggaattttta aaacaggtgc aaagccacct taccccggat
    11161 ggtattgtaa tgtttaatac cacgcacagc ccgcatgctt ttgctaccgc cgtacacagt
    11221 attccctatg cataccgcta tgggcatatg gtagtcggct cggcaacccc ggtagttttc
    11281 cctaataaag aactgctcaa gcaacgtctc tcccggttga tttggccgga aagcggcagg
    11341 cacgtatttg acagcagcac cgtggatgct gcagcacaaa aggttgtctc tcgtatgctg
    11401 attcagatga cggaaccttc ggctggggcg gaagtcatta ccgacgataa tatgattgta
    11461 gaatacaaat acggcagagg gatttaaccg tcttaaaggg tttcaggcaa cgcaggtttt
    11521 aggtaacgtc ctgctagttc aaaaaaaccg catcacagca gtcgggacaa aatggtttaa
    11581 acattttgtc ccgaattctt attcct
//
LOCUS       DAWKOX010000051        11585 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.051, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000051 DAWKOX010000000
VERSION     DAWKOX010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11585
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.051"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            125..4087
                     /gene="purL"
                     /locus_tag="WJK78_000985"
     CDS             125..4087
                     /gene="purL"
                     /locus_tag="WJK78_000985"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ7597926.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGRLNDDEKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     DAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPCLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGGKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAINIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFVDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLFAGARKALG
                     "
     gene            4182..4940
                     /gene="gloB"
                     /locus_tag="WJK78_000986"
     CDS             4182..4940
                     /gene="gloB"
                     /locus_tag="WJK78_000986"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ7597927.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLDFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            5247..9720
                     /gene="mspA"
                     /locus_tag="WJK78_000987"
                     /gene_synonym="ausI"
                     /pseudo
     CDS             5247..9720
                     /gene="mspA"
                     /locus_tag="WJK78_000987"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
     gene            9952..11406
                     /gene="mgtE"
                     /locus_tag="WJK78_000988"
     CDS             9952..11406
                     /gene="mgtE"
                     /locus_tag="WJK78_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ7597928.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLGELHPADVAAVLESLPPRERNVVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRVTVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
BASE COUNT         2967 a         3620 c         2854 g         2144 t
ORIGIN      
        1 ctgtattttc cccaactgta tgccgtctga agattgtcaa cattttaagc caaaataccc
       61 aagcaataca gccccgttgc gcgtataatg acagattttc caaccgcatt tgagagccga
      121 atccatgtct gtcgttttgc ccttgcgcgg cgttaccgcc ctttccgatt tccgtgtcga
      181 aaaactcttg caaaaagccg ccgcactcgg actgcccgaa gtcaaattaa gcagcgaatt
      241 ttggtatttc gccggcagcg agaaagcatt ggatgccgcg actgtcgaaa aactgcaagc
      301 cttgttggcg gcgcaaagcg ttgaacaaac gccaaaagcg cgcgagggct tgcatttgtt
      361 tttggtaacg ccccgtttgg gtacgatttc gccgtgggct tccaaggcga ccaatatcgc
      421 ggaaaactgc ggtttggcag gcatcgaacg catcgagcgc ggcatggcgg tgtggctgga
      481 aggtcgtctg aacgacgatg agaaacagca atgggcggcg ttgctgcacg accgcatgac
      541 cgaatccgtg ctgcccgatt ttcagacggc atccaaatta ttccaccatc tcgaatccga
      601 aaccttttcc accgttgatg ttttaggcgg cggtaaagag gctttggtca aagccaatac
      661 cgaaatgggt ttggcactct ccgccgacga aatcgattat ctggttgaaa actatcaggc
      721 tttgcagcgc aatccgtccg atgttgaatt gatgatgttc gcgcaggcaa acagcgaaca
      781 ctgccgccac aaaatcttca acgccgattt catcctcaac ggcgaaaaac aaccgaaatc
      841 cctgttcggc atgatacgcg acacgcacaa cgcgcatccc gaaggtacgg tcgtcgctta
      901 taaagacaat tcgtccgtaa tcgaaggcgc gaaaatcgag cgtttctatc cggatgcggc
      961 ggaaaaccaa ggctaccgtt tccacgagga agacacgcat atcatcatga aagtggaaac
     1021 gcacaaccac ccgaccgcca tcgcgccgtt tgcgggcgcg gcaacgggcg cgggcggcga
     1081 aatccgcgac gaaggtgcga cgggcaaagg ttcgcgtccg aaagcaggct tgaccggctt
     1141 taccgtgtcc aacctcaaca tcccctgcct caaacagccg tgggaacaag attacggcaa
     1201 gccggaacat atttcctcgc cgctggacat tatgattgaa ggccccatcg gcggcgcggc
     1261 gttcaacaac gaattcggcc gccccaacct cttgggctac ttccgcacct ttgaagaaaa
     1321 atttgacggt caggttcgcg gctaccacaa accgattatg attgccggcg gtctgggcag
     1381 cattcaggcg cagcagacgc ataaagacga aatccccgaa ggcgcattgc tgattcaact
     1441 gggcggcccg ggcatgctta tcggcttggg cggcggcgcg gcttcttcga tggataccgg
     1501 cacgaacgac gcgtctttag acttcaattc cgtacaacgc ggcaaccccg aaatcgaacg
     1561 ccgcgcgcag gaagtcatcg accgctgctg gcagctcggc ggcaaaaacc cgattatctc
     1621 catccacgac gtgggcgcgg gcggtttgtc caacgccttc cccgaactcg tcaacgatgc
     1681 cggacgcggc gcggtattca agctgcgcga agtgccgttg gaagaacacg gtttaacgcc
     1741 tttgcaaatc tggtgtaacg aatcgcaaga gcgttatgtg ttgtcgattt tggaaaaaga
     1801 tttggacacc ttccgcgcca tctgcgaacg cgaacgctgc ccgtttgccg tggtcggcac
     1861 ggcgaccgac gacggccatt tgaaagtgcg cgacgatttg ttcgccaaca accccgtcga
     1921 tttgccgctg aacgtcttgc tcggcaaacc gcccaaaacc acgcgtaccg acaaaacggt
     1981 tacgccgtcc aaaaaaccgt ttcacgccga cgatatcgac atcaccgaag ccgcctaccg
     2041 cgttttgcgc ctgcctgccg tagccgccaa aaacttcctg attaccatcg gcgaccgcag
     2101 cgtcggcggc atgacccacc gcgaccaaat ggtcggcaaa taccaaaccc ccgtagccga
     2161 ctgcgccgtt accatgatgg gcttcaatac ctatcgcggc gaagcaatgt ctatgggcga
     2221 aaaaccgacc gttgccctgt ttgacgcgcc cgcctcgggc agaatgtgcg tcggcgaagc
     2281 catcaccaac atcgcggcga tcaacatcgg cgacatcggc aatatcaaac tctccgccaa
     2341 ctggatggcg gcgtgcggca acgaaggcga agacgaaaaa ctctaccgca ccgtcgaagc
     2401 ggtttccaaa gcctgtcagg cattggattt gagcattccc gtgggcaaag acagcctgtc
     2461 gatgaaaacc gtatggcagg atggcgaaga gaaaaaatcc gtcgtttcgc cgttaagcct
     2521 gattatctcc gcgttcgcgc cggttcaaga cgtacgcaaa accgttacgc ccgaattgaa
     2581 aaacgtcgag gacagcgtat tgctgtttgt cgatttgggc ttcggcaaag cgcgtatggg
     2641 cggctctgca ttcggtcagg tatacaacaa catgagcggc gacgcgcccg atttggacga
     2701 cacaggccgt ctgaaagcgt tttacaacgt gattcaacag cttgtcgccg aagacaaact
     2761 cttggcatac cacgaccgca gcgacggcgg cttgtttgcc gttttggtag aaatggcgtt
     2821 tgcagggcgg tgcggcttgg atatagattt aaatttattg cttgcacaaa catttattac
     2881 caaccatacc gctctgtctc aatcattgcg gactgaagag gtaaaagcgt tggctgaatg
     2941 gcaagaaacc attgcccgca cattatttaa tgaagagttg ggtgctgtta tccaagttag
     3001 aaaacaagat gttgccgata ttatcaattt attctatcaa caacagctgc atcataatgt
     3061 ctttgaaatc ggtacgttaa ctgatgagaa cacgttaatc atccgcgacg ggcaaacgca
     3121 ccttatttct gacaacctaa tcaaactgca acaaacctgg caagaaacca gccatcaaat
     3181 ccaacgcctg cgcgacaacc ctgcctgcgc cgacagcgag tttgccctga ttggcgacaa
     3241 cgaccgcagc gcattgtttg ccaacctgaa attcgacgtg aacgaagaca tcgccgcgcc
     3301 gtttatcaac agcggcgcga aacccaaaat cgccatcctg cgcgaacagg gcgtgaacgg
     3361 gcaaatcgaa atggccgccg cgttcacccg tgccggattc gatgcctacg acgtgcatat
     3421 gtccgacctg atggcaggcc gcttccgcct tgccgacttc aaaatgctgg cggcgtgcgg
     3481 cggcttcagc tacggcgacg tactcggcgc gggcgaaggc tgggcgaaat ccatcctgtt
     3541 ccaccctgct ctgcgcgacc agtttgccgc cttcttcgcc gacccggaca cgctgacatt
     3601 gggcgtgtgc aacggctgcc aaatggtcag caacctcgcc gagattatcc cgggtgcaga
     3661 ggcatggccg aagttcaaac gtaacttgag cgaacagttc gaagcgcgcc tgagtatggt
     3721 tcacgtcccc aaatccgcgt cgctgattct gaacgaaatg caaggctcca gcctgcccgt
     3781 cgtcgtcagc cacggcgaag gccgcgccga cttcgcgctt cacggcggca acatttctgc
     3841 tgatttgggc atcgcgctgc aatatgtgga cggacaaaac caggttaccc aaacctatcc
     3901 gctcaaccct aacggctcgc cgcaaggcat cgccggtgtg accaacgccg acggccgcgt
     3961 gaccattatg atgccccacc ccgaacgcgt gtaccgtgcc gcgcaaatga gctggaaacc
     4021 ggaaggctgg acggaactgt ccggctggta ccgcctcttt gccggcgcac gtaaagcctt
     4081 gggctaaccg ccctactcaa accaatgccg cctgaagaat atttcagacg gcgttccggc
     4141 ataccatcct ttaaacggta tccgtccacc gaggaacact catgaaaatc acccccgtca
     4201 aagccttgac cgacaactac atctggatga tacagcacgg caaccatgcc gtctgcgtcg
     4261 acccttccga accctcgccc gtcttggaat tcctcgtccg caaccgcctc atgcttgccc
     4321 aaacatgggt aactcacccc catcccgacc acgagggcgg tgcggcggca ctctggcgcg
     4381 gctacatgga atcgcccgtt tacggcgaat ccgacatcga agcagcaacc cacaccgtaa
     4441 ccgccggcac ccaattcacc ttcggcgacg gacaggttac cgtttgggca acacccggcc
     4501 acacagaccg ccacaccagc taccttctcg aaacttcaga cggcatacac gtcttttgcg
     4561 gcgacaccct tttttccgcc ggctgcggac gcgtgtttac cggcacaatc gaacagcttt
     4621 acgacagctt ccaacgcttc aaccgcctgc ctgaaaacac cctgttctat ccggcgcacg
     4681 aatacaccgc cgccaacctg gattttgccg cccatatcga gccggacaac gccgacattc
     4741 agacggcact gaaagcggcg gcgcatacgc ctaccctgcc cgttaccctc gcgcacgaac
     4801 gccgtgtcaa tccgtttttg cgcgtcgacc tgccgcacgt cagagaccgc gccgaggcat
     4861 tgagcgggaa aacgttaaac agcagcctcg atacctttgt cgcgctgcgt gaacttaaaa
     4921 accaataccg gacgaaataa aacaacggga aaacgcagcc attcctagga tttttattaa
     4981 aatcttaaat aaaatcatac aatcatcgcc aatagacgaa aggacaccgt tgccttataa
     5041 tcaaacaaaa acaaaatata taatatagtg gattgaattt aaatcaggac aaggcgacga
     5101 agccgcagac aatacagata gtacggcaag gcgaggcaac gctgtactgg tttttgttaa
     5161 tccactatat aaatccagca caaaacggga tcggtgattc ttgtccgcaa gaatcgttga
     5221 ttttctctat tacacggata atcatcatgc gcttcacaca caccacccca ttttgttccg
     5281 tattgtccac cctcggtctt tttgccgttt cccctgctta ctcatccatt gtccgcaacg
     5341 atgtcgatta ccaatatttt cgcgactttg ccgaaaataa aggcgcgttc gccgtaggtg
     5401 caagcaatat ttccatccaa gacaagcaag gcaaaatatt aggcagggtt ctcaacggca
     5461 tccccatgcc cgacttccgc gtcagcaacc gccaaaccgc catcgccacc ctggttcacc
     5521 cccaatacgt caacagtgtc aaacacaacg tcggctacgg ttccatacaa ttcggcaacg
     5581 acacccaaaa tccagaagaa caagcctata cctaccgcct cgtatcacgc aacccgcacc
     5641 cggactacga ctaccacctt ccccgcctca acaaactggt taccgaaatc tcacctgccg
     5701 cactcagcag cgtacccttg cttggaaacg gccagccaaa ggccaatgcc tacctcgata
     5761 ccgaccgctt cccatacttt gtacgactcg gctcaggcac gcaacaagtc cgcaaagcag
     5821 acggcacgcg tacacgaacc gccccggcat accaatacct gaccggcggc acgccgctga
     5881 aagtattggg gttccaaaac cacggcttac tcgtcggcgg cagcctgacc gaccaacccc
     5941 ttaacaccta cgcaatcgcc ggagacagcg gttcccccct gtttgccttc gacaagcatg
     6001 aaaaccgctg ggtgcttgcg ggcgtactca gcacctacgc cggcttcgat aatttcttca
     6061 acaaatacat cgtcacgcaa cccgaattca tccgttccac catccgccaa tacgaaaccc
     6121 ggctggatgt cgggctgacc accaacgaac tcatatggcg cgacaacggt aatggcgaca
     6181 gcaccctgca agggctcaac gaacgcatca ccctgcccat tgcaaaccct tcgcttgccc
     6241 cacaaaacga cagcaggcac atgccgtctg aagatgccgg caaaacgctc atcctatcca
     6301 gcaggttcga caacaaaaca ctgatgctgg cagacaatat caaccaaggc gcaggcgcat
     6361 tgcagttcga cagcaacttc accgtcgtcg gtaaaaacca cacatggcaa ggtgcaggcg
     6421 ttatcgtagc cgacggcaaa cgcgtcttct ggcaagtcag caaccccaaa ggcgaccggc
     6481 tctccaaact gggcgcaggc acgcttatcg ccaacggaca aggcatcaac cagggcgaca
     6541 tcagcatcgg ggaaggcact gtcgtactcg cccaaaaagc tgcttcagac ggcagcaaac
     6601 aagcattcaa ccaagtcggc atcaccagcg gcaggggcac ggccgtcctc gccgacagcc
     6661 agcaaatcaa acccgaaaac ctctatttcg gcttcagggg cggacggctc gacctcaacg
     6721 gcaacaacct tgcctttacc catatccgcc atgcggacgg cggcgcgcag atcgtcaacc
     6781 acaaccctga ccaagccgcg acactgacgc tgaccggcaa ccccgtcctc agtcccgagc
     6841 atgtcgagtg ggtgcaatgg ggcaaccgtc cgcaaggcaa cgcggcggtt tacgaataca
     6901 tcaacccgca ccgcaaccgt cggaccgact acttcatact caaacccggc ggcaacccgc
     6961 gcgaattttt cccgttaaat atgaaaaact caacaagctg gcaatttatc ggcaacaaca
     7021 ggcaacaggc cgccaaacaa gtcgcccaag ccgaaaatgc ccgccccgac ctaattacct
     7081 tcggcggata cttgggtgag aacgcgcaaa cgggcaaagc cgcaccgagt tacagcaaaa
     7141 ccaatatcga atgggtgaat ggtccaaaca ccccacacaa gccctcgccc tatacgaata
     7201 cgccaacccg cacaggggca ggcgtaccga cgattaccgc ctcaaagaaa gcggcaaccc
     7261 cggcgcctac ttcccatgga atgcctacag cacccaagcc tgggaatttc tcggacatga
     7321 ccggcgaagc agccatagaa aaaacccgcc atatcgcaaa tgccgccgta tacggcaggc
     7381 ccgaataccg ttacaacggc gcactcaacc tgcactatcg tcccaaacgc accgacagca
     7441 cgctgttgct caacggcggc atgaacctta acggggaagt cttgattgag ggcggcaata
     7501 tgattgtgtc aggcaggccc gtaccccatg cctacgacca ccaggccaaa cgcgaacccg
     7561 ttcttgaaaa cgaatggacc gacggcagct tcaaggctgc acggttcacc ctgcgaaacc
     7621 atgcccgact gacggcaggg cgcaataccg cgcatctgga cggcgacata accgcatacg
     7681 atctgtccgg catcgacctc ggctttaccc aaggcaaaac accggaatgc taccgctcct
     7741 accatagcgg cagcacccac tgcacaccca acgccgtttt aaaagccgaa aactatcgtg
     7801 cactacctgc aacgcaagta cgcggcgaca ttacccttaa cgaccgttca gagctccgcc
     7861 tgggcaaagc acacctgtac ggcagcatcc gtgccggcaa agacaccgca gtccgcatgg
     7921 aagcagacag caactggaca ctttcccagt ccagccacac cggcgcactg acgcttgacg
     7981 gcgcacaaat taccctgaac cccgatttcg ccaataatac acacaacaac cgcttcaaca
     8041 cactgaccgt caacggcaca cttgacgggt tcggcacatt ccgattcctg accggcatcg
     8101 tccgaaaaca aaatgccccc cctcaaactg gaaggggaca gccgcggcgc attccaaatc
     8161 cacgtcaaaa acaccggaca agaacctcaa acaaccgaat cgcttgcact tgtgagcctc
     8221 aatccgaaac acagccacca agcccgattc accctccaaa acggctatgc cgatttgggt
     8281 gcctaccgct acatcctccg caaaaacaac aacggataca gcctgtacaa cccgctcaaa
     8341 gaggccgaac ttcaaattga agccacgcgt gcggaacatg agcgcaacca acaggcatac
     8401 aaccaattac aggcaaccga catcagcaga caggttcaac atgactctga cgcgaccagg
     8461 caggcactac aggcctggca gaacagtcaa accgaacttg cccgcatcga cagccaagtc
     8521 caatatctgt ccgcccaatt gaaacagaca gacccgctga ccggcattct gacgcgtgcc
     8581 caaaacctgt gtgccgcaca aggatacagt gtcgatatct gccgtcaggt tgccaaagcc
     8641 gccgacacga acgacctgac actcttcgaa accgaactgg atacgtatat agaacgtgta
     8701 gaaatggccg aatccgaact tgacaaagca cggcaaggcg gcgatgcgca agccgtcgaa
     8761 acagcccggc acgcctacct gaacgcactc aaccgtctgt cccgacaaat ccacagtttg
     8821 aaaaccggcg ttgccggcat ccgtatgccg aacctggccg aactgatcag ccggtcggcc
     8881 aacaccgccg tttccgaaca ggccgcctac aataccggcc ggcaacaggc gggacgccgc
     8941 atcgaccgcc accttaccga tccgcagcag caaaacatct ggctggaaac cggtacgcaa
     9001 caaaccgact accatagcgg cacacaccgt ccctaccaac aaactaccaa ctatgcacat
     9061 atcggcatcc aaaccggcat caccgaccgt ctcagtgtcg gtacgatttt aaccgatgag
     9121 cgcacaaaca accgttttga tgaaggcgta tccgcccgaa accgcagcaa cggcgcacat
     9181 ctgttcgtca aaggggaaaa cggcgcactc tttgccgcgg cagatttagg ctacagcaac
     9241 agccgtaccc gatttaccga ttatgacggg gctgccgtcc gccgccacgc atgggatgca
     9301 ggcatcaaca ccggcatcaa aatcgatacc ggcatcaacc tcagacccta tgccggcatc
     9361 cgtataaacc gcagcaacgg caaccggtac gtactcgacg gcgcagagat aaacagcccg
     9421 gcgcaaatcc aaaccacatg gcatgccggc atccgtctcg ataaaaccgt cgaactgggt
     9481 caagccaagc tgacccccgc tttcagcagc gattactacc atacccgcca aaacagcggt
     9541 tccgccctca gcgtcaacga ccgtacctta ctgcagcaag ccgcccacgg cacactgcat
     9601 accctgcaaa tcgacgccgg atacaaaggc tggaacgcca aacttcatgc cgcttacggc
     9661 aaagacagca acaccgcccg ccacaaacag gcaggaatca aaataggcta caactggtaa
     9721 caagccggta aaaatgccgt ctggaacccg cgtttcagac ggcatttgcg ttaaaaatag
     9781 taaaccgttt caaaagggag tagaatagtg ccgtttccaa ccctgcgcct gtaccgtcag
     9841 gcttttatta tggaccttcc cagttcgttt ttactgaacg ccccttccga ttccaaacga
     9901 caataaccat cccgccggaa tgcctccccg cacacggcgg gcggagcatt tatgagcatc
     9961 gaacacactc ctccgacaca cgacggcgaa accggtcaaa accatgccga acgcccttcc
    10021 gccgatttcg accgtgtcca ctccctctgc gaaatcctcg aacctgcttt tgaacaaatc
    10081 gaaaacggca caccgctcga agacgcgccg ctgcgcgaca agctgaccga gctgaccgtc
    10141 ctcttgggcg agctgcaccc tgccgacgtg gcggcggtgt tggaatcgct gccgccgcgc
    10201 gaacgcaacg tcgtttggct tctggtcaaa cccgaagacg acggcgaagt attgctggaa
    10261 gtatccgacg cggtgcgcga aacactgatc gagtcgatgg ataaggacga attgttggcg
    10321 gcagttgacg atttggacgc ggacgaattg gcggaactgg cagacgattt gccgcaccaa
    10381 gtggtttacg aagccttaca gacgcgtgat gaggaagaac gcgcccaagt caaggcggca
    10441 atgtcctacg aagacaacca agtcggtgcg attatggact tcgagttggt cagcatccgc
    10501 gccgatgtcg cctgcgaagt ggtgctgcgt tacctgcgcc gcttcgacag cctgcccgac
    10561 cacacggata aaatcttcgt ggttgacgaa aacgatgtgt tgcagggcgt gctgcccatc
    10621 cgcaaacttt tggtcgccga tcccgaagac ttggtggaaa acgtgatggc gaaagatgtc
    10681 gtgcgtttcc gcgccgaaga cgacgtggaa gaagcagcgc aggcgtttga acgctatgac
    10741 ttggttaccg cgcccgtcgt cgatgaaaac aaaaagctca tcggcagggt gaccgttgac
    10801 gaaatggtgg acgtgatccg cgaagaatcc gaagcagata tgttgaacat ggcgggtttg
    10861 caagaagagg aagacttatt cgcccccgtc ttggattccg tcaaaaaccg ctggatgtgg
    10921 ctcgccgtca acctctgcac cgccttcctt gccagccgcg tcatcggcgc gtttgaaggc
    10981 agcatcgaaa aaatcgtcgc actcgccgcg ctgatgccca tcgtcgccgg tatcggcggc
    11041 aactcgggca accagacgat taccatgatt gtccgcgcca tggcgatggg gcaactgaca
    11101 ggcatgcagg caggcaggct gttgaaaaaa gaagtcggcg ttgccctagt caacggcatt
    11161 atctggggaa ccgtcatggg cgcggtttca tggctgctct acggcagcct cggcatcggg
    11221 ctggttatga ttgccgcgat gacgctcaac ctcctgctgg cggcaaccgt cggcgtatta
    11281 attcccgtgg taatggaaaa gttcggacgc gatcccgcac tgggcagctc ggtgctgatt
    11341 accgccgtta ccgactccgg cggcttcctg attttcttgg gtctcgccac cctgttcctg
    11401 ctttaaatgc cgtctgaacc cgcgcaaaaa tgccgtctga agcggaagct gcttcagacg
    11461 gcatttgact atttatcctt gttgcacaag attattggac ggtatgccgg ggcagccctt
    11521 tggcaacgcc gaccacatcc tccccgaaca gcgcgttgac atcggtttcg tcaaacacat
    11581 atttg
//
LOCUS       DAWKOX010000052        11576 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.052, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000052 DAWKOX010000000
VERSION     DAWKOX010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11576
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.052"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(86..955)
                     /locus_tag="WJK78_000989"
     CDS             complement(86..955)
                     /locus_tag="WJK78_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ7597929.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQVGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            complement(1050..1967)
                     /gene="hisB"
                     /locus_tag="WJK78_000990"
     CDS             complement(1050..1967)
                     /gene="hisB"
                     /locus_tag="WJK78_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ7597930.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPNARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            complement(1964..3061)
                     /locus_tag="WJK78_000991"
     CDS             complement(1964..3061)
                     /locus_tag="WJK78_000991"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ7597931.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            complement(3107..4396)
                     /gene="hisD"
                     /locus_tag="WJK78_000992"
     CDS             complement(3107..4396)
                     /gene="hisD"
                     /locus_tag="WJK78_000992"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ7597932.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            complement(4393..5292)
                     /locus_tag="WJK78_000993"
     CDS             complement(4393..5292)
                     /locus_tag="WJK78_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ7597933.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            complement(5396..6049)
                     /locus_tag="WJK78_000994"
     CDS             complement(5396..6049)
                     /locus_tag="WJK78_000994"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ7597934.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            complement(6128..6781)
                     /locus_tag="WJK78_000995"
     CDS             complement(6128..6781)
                     /locus_tag="WJK78_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ7597935.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            7058..7142
                     /locus_tag="WJK78_000996"
     tRNA            7058..7142
                     /locus_tag="WJK78_000996"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7092..7094,aa:Leu,seq:caa)
     gene            7852..9579
                     /gene="ilvB"
                     /locus_tag="WJK78_000997"
     CDS             7852..9579
                     /gene="ilvB"
                     /locus_tag="WJK78_000997"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ7597936.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSSDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDTLGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
     gene            9590..10081
                     /gene="ilvN"
                     /locus_tag="WJK78_000998"
     CDS             9590..10081
                     /gene="ilvN"
                     /locus_tag="WJK78_000998"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ7597937.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            10148..10441
                     /locus_tag="WJK78_000999"
     CDS             10148..10441
                     /locus_tag="WJK78_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004521031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ7597938.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAA"
     gene            10521..11534
                     /gene="ilvC"
                     /locus_tag="WJK78_001000"
     CDS             10521..11534
                     /gene="ilvC"
                     /locus_tag="WJK78_001000"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ7597939.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         2609 a         2765 c         3217 g         2985 t
ORIGIN      
        1 tcataatcgg gactgatttt aagcgtgggg tgataaaaat gccgtctgaa atatgttcag
       61 acggcattgt gtttggaaaa ggcaatcagt gttctgccaa tttcaggtaa acgccggaaa
      121 cgtcctgttc gccgtagccg gcttcgactg ctttgcggta gctggcagca acggtttcga
      181 cggcgggcag ggtgttgcct acctgttcaa gctctttgac ggcgaggttg aggtctttgg
      241 aggcgtgttt gagggcgaag gcgggtggga attcgcggtt tgcccacagg gattttttgg
      301 tttggaacat gggcgagtcc attgccgagc cgccgatggc ttcgacgatg gtgtcggtat
      361 cgatgccgaa ctgccgcgcc atcagcatcg cttcgctgta cgcttcgccg aaaatgccca
      421 agagcgagtt caagacgagt ttcgcgcccg aacctttgcc gacatcgccg aaatggaagg
      481 tttttttgcc gacgagggaa aatatttttt gcagcgggtt taaaacggct tcgctgccgc
      541 cgaacagaat cagcagcgtg ccgttggtgg cgggcccgac cgatccggaa acgggtgctt
      601 cggcaaactg tccgcctgcg gcttcgacaa gtgctttgac ggcgaggttt tcggtcgggg
      661 agatggtgct catgttgacg atgattttgc cggccaatcc gtcgcggact ccgttcagga
      721 tgtcgcacac ggcggcatag tcggaaacca tcaggaaaat gacgggatag tcgcggacga
      781 gttcggcggt gttgccgtaa acttttgcgc ctttggcgga gatgggggca gttttgtcgg
      841 gcgagcggtt gtatacgccg acttcgatgc cgccgtccaa gagccgcgtt accataggca
      901 gacccatttg ccctaagcct atccagccga tttgtgtgta ttcgtttgcg gacatgatgt
      961 ttactccttt tctgtttgta gtgtagtgta atcttatctg ttccgatacc gtctgaaaag
     1021 cctgcgggtg tttcagacgg tatggttttt tatgcggtca gcgtgccttt ggtcgagggg
     1081 gtctgtcctg ccatgcgcgg gtcgtgttcg actgccatac gcagggcgcg cccgaaggct
     1141 ttgaatacgg tttccgcctg atggtgggcg tttttgccgc tgaggttgtc gatgtgcagg
     1201 gtcatcatac tgtggttgac gatgccgtgg aaaaattctt caaacaaatc gacatcgaaa
     1261 cgtccgatta gtgcgcgggt aaattcgatg ttgtacacga gtccggggcg gccggaaagg
     1321 tcgatgacga cgcggctgag ggcttcgtcg agcgggacgt aggaatgtcc gtaacggcgg
     1381 atgccttttt tgtcgccgag tgcctgccgg attgcttgtc cgagtgtgat gccgatgtct
     1441 tcggcggtgt ggtggtcgtc gatgtgcagg tcgcctttgc agctgatgtc gatgtcaatc
     1501 atgccgtggc gggcgatttg atcgatcatg tgttcgagga agggtacgcc ggtatccagc
     1561 ctgcttttgc cgctgccgtc gaggttgatg gagacggtga tttgggtttc gcaggtattg
     1621 cggttgacgg taacgctgcg gcagccggca gcagatgcgg tttcggcaat ttgggtttcg
     1681 gcagttccgg tgctttctgc ggcggtttcg gggacagtgc gttcgcggtg ttttctgtcg
     1741 agccagcctt tgggtttgcc ggtgtgtttt tcgagttttg ccatcaggct gggacggatg
     1801 ccgcgtgcat ttgggtcttc tgcctgcttt tcaaggcgtt gtttgagttt gtagagtgcg
     1861 acgggggtac ggtagccgca gagtttggcg agcttggaca gcgaacctgc ttcttgggcg
     1921 agggtcagaa agttgtgcag ttggcgttgt gttttagtca aattcatagg aaatccgttg
     1981 gttggcagta aagttggcga atgatgttga gaacggcatc gttttgtgcg gggctgccta
     2041 cggtaatgcg caggcagtgt tccaaaagcg ggtgcgcgcc atgcagtttt ttaaccaaga
     2101 tgcggttttg tttgagcgtg tcaaacaaca aatcggcatc gggtacgcgt atggtaatga
     2161 agtttgcctg acttggaaag gtgttcagac ggcatatttt gcccaattcg gcgaacatcc
     2221 gttcgcgttc gtttttcagg ctgtcgatgt tggcagagat gatgccgtag tgttgcaggg
     2281 cgagtttggc ggtggtcagg ctcagttggt tcatattgta gggcggcagg attttttgca
     2341 gttcgccgat gacttcggga cagcctgccg catagccgat acgcagtccg gcaaaaccga
     2401 ttttgctgac ggtacgcatg acgatgaggt tgggaatgct gcccgcctgc ggcaggaagc
     2461 tgtcgccgtt gaatgcgccg taggcttcgt cgacgacgac gatgccgtct gaagcttcga
     2521 tgacggcttc gatttcggca cgcgtgaaac atacgccggt ggggttgttg gggtaggcga
     2581 taaaggtcag ggcagggcgg tgcttcctga cggcttcgag gacggcgggc aggttgaggg
     2641 tgaaatctcc gttcagtgga acgccgacat aatccatgcc gtacagcgcg gcgttgtggc
     2701 ggtacatgac gaaactgggt tcggctgcca acattgccgc gcccggtttg gcggtcagca
     2761 tcgtgatgaa ctgtatcagc tcgtccgagc cgttgcccag cgcgatgtcg gcgcagtcgg
     2821 gaatgtcgaa cgccgaacgt aatgcttcct gtaaaccgct gccggaggga ttggggtaaa
     2881 gatggatggg cgcggcggca agccgtgcct gccattcctg caacagcgtt tcatgtccgg
     2941 caaaagggtg gacgggactt tccatcgaat cgagtttggc aaagccgggc ggaacgtcgg
     3001 caatctgata tgccgacata gcttgtatgt cgtcgcggat gaaggagcgg acggatttca
     3061 tcgtgtttcc ttaatggttg gaatatgcct gtacgccgtt tcggcattat ttcatacgga
     3121 actctgccgc gcgggcgtgg gcggtcaggc tttcgccgtg tgccagcacg ctggcggttt
     3181 cgcctaattt ttgcgcgccc tgttccgaaa cctgaatcag gctggagcgt ttttggaaat
     3241 catatgtccc caaaggcgag gaaaagcggg cggttcggct ggtgggcaat acatggtttg
     3301 gaccggcgca gtagtcgccg aggctttcgc cggtgtagcg tcccatgaaa atcgcaccgg
     3361 cgtggcggat ttttttcgcc cattcctgcg gattttcgac tgacagttcc aagtgttcgg
     3421 gggaaatgta gttggcgatt tcgcaggctt cgtccaagtc tttggcgagt atcatcgcgc
     3481 ccctgttgcc gagcgaggct tcgatgatgt cgcggcgcgg catagtttcg atcaggcggt
     3541 ccatagcggc ttctacttcg tcgagatacg cttgcgacgt gccgattaag atggcttggg
     3601 caatttcgtc gtgttcggcc tggctgaaca aatccatcgc cacccaatcg gcaggtgtcg
     3661 tgccgtcggc gatgaccagg atttcagacg gccccgccac catgtcgatg ccgaccacgc
     3721 cgaacacgcg gcgtttggcg gcggcgacga aggcgttgcc cggaccggtg attttatcga
     3781 cttgggggat ggtttccgtg ccgtaggcga gggcggcaac cgcctgcgcg ccgccgacgg
     3841 tgaagacttt ggttacgccg gcgacgtatg cggcggcaag cacgatgtcg ttgcgttcgc
     3901 ctttcggtgt cggcacgacc atgatgattt ctttcacgcc tgcgacgtgg gcgggcatgg
     3961 cgttcatgat gacggaactc ggatatgccg ccttgccgcc ggggacgtaa atgccgacgc
     4021 ggtcaagcgg ggtaatctgt tgtcccaaca gcgtgccgtc ttcatcggtg tagctccacg
     4081 attccatttt ttggcgttgg tggtagcttt cgacacggcg ggcggcggtc tgcaatgccg
     4141 tctgaacgtc gttcggaatg cgctcgaacg ccgcgttcaa atcggcttgc gtgagtatta
     4201 aatcatcgat gcttttagcg tttgtctgat cgaatttgtt ggtgtattca atcaaagccg
     4261 catcgccgcg cttttgcacg tcggcgcaaa tgtcggcgac gatgcgttcg gtttcggggt
     4321 tttgcgcggt ttcaaaagcc agcagggctt tgagtccggc ttggaaatcg ggcgattggg
     4381 tgttgagttt tttcatgatt tggttttttc cttttttatt tttggattgg gggtcgtctg
     4441 aatattctct tgttcagttt ctgtctctgt tttgggtctg atatacgctt tttctccccc
     4501 gctaccaaac ttcaattcgg gcaggcattt ttgttgcaga ccgagtttgg ctaatacctc
     4561 ttcgctacga gaggtagtgc ggaaacggta acgggattgt tttctaccgt ttttggtttc
     4621 ctcaaccatt gtttcaaaac cgtccacttc gtatgcactg acaacagcgt tttgcagacc
     4681 ggtgtgaacg ccgataacgt atttcacttt tgaagcaaca tctttaccga taacccagtt
     4741 gcccaacgta cgcgatttga ggttggcatc gtcttggttg tcgaaaaggt agtctaattc
     4801 ttcgtcagta tctaaatcga aagcattgtg gattttgatg gcgagaatca gcccgtcggg
     4861 gttaatctcg ttaagtggga gagaagagaa tccaaagcgg cgatctagtt cttctacgct
     4921 aataccaccc ggaccatgcc cggcaatttt atttttgagt tttttaccca agacagattt
     4981 aacaaaatga attaaggcag attcggcggc gagtgcttcg acttcagtca gatgatagct
     5041 gatgatatag cgaccgagtt tcttgcattt ggagatggct ttgagtttcc gatcgataat
     5101 ctcgccggag actgggtctt gtgaacgact agcaacccat tcatgctcga agatacgatt
     5161 accgcagcct ttgccgatgt agaggatttt gtcttttttc aggtcggtca gacaatagac
     5221 ataaaaccga cgctcgccgt tattcaaaac ggaaagggtt gaatctgaga atttttttat
     5281 ttttgcaacc attttaactt ctcctataca gtttactgcc ggtgatattt tcagacgacc
     5341 tgtcggcggg aacggatagg gtcgtctgaa aacgcatctt tattcaaatg gatgcttact
     5401 tcgccttcac tgcgccgccg aacgcctgaa taatcggctc cagcagcgcg tatttcgttt
     5461 tcaaagcagc cttgttgacc accaggcggc tggaaatgtc gacgatgtgt tcgactgctt
     5521 ccaagccgtt tgccttcaag gtgttgcccg tcgaaaccaa gtccacaatc gcatcgctca
     5581 agccgaccag cggcgcaagt tccatcgagc cgtacagttt gataatgtcc acatggacac
     5641 ccttgccggc aaaatgagat gccgcgattt caggatactt cgtggcaatc ttcagacggc
     5701 atccgggttg cgaagctgct tcgtaatcaa accctttacg cacagcaacc atcatgcggc
     5761 acttggcaat ctccaaatcc aaaggccggt aaagccccgt gccgccgtgt tcgatcagca
     5821 cgtctttgcc cgcaatgccg aagtccgccg cgccgtagcg gacataagtc ggcacatcgg
     5881 ttgcgcggac aatgacaagg cggatgtttt catggttcgt cccgataatc agcttgcgcg
     5941 atttttcagg ctcttcagtc ggaacaatgc cggcagcggc aagcagcggc agcgtctcct
     6001 caaaaatgcg ccccttggat aaggcgatgg tcaaagcatt atcctgcatg gtgtggatgt
     6061 cctttgtcgg ttgaaacaat aatgccgtct gaataggcgc cgacggtgca gacggcatac
     6121 ggttttatca gagcagagtc cttacatcgg cagcaatcgt ttccggctcg cttccgtaag
     6181 gcgagaaaat ggcaacctca ccgtttttgt cgatgagata cgcaccggaa gagtggtcga
     6241 ccaaatagtt ttcgctgtcg tctttttgat tgactttggc agaaaccacg cggtattgct
     6301 gcttgatgac cggcaggttt tggtcgcccg ttgccgtcag accgataaag tccggattga
     6361 actgtttggc atacttgccg atgatttcag gcgtgtcgcg ttccggatcg atgctgacga
     6421 acaccacttt cacgtcctta gcctgcccgc ccaactgctt caacgtgtcg ctgtacgtca
     6481 aaagctctgt cgggcagaca tcgggacagt gcgtaaagcc gaaagacaga atcacgacct
     6541 tgcctttcaa atcgctcagg ctgaaaggct tgccttcgcc gtcggtcagc gtgaaatcgc
     6601 cgccgatgtc ttccttacgc atatccgtac cgcgcgtttg cggctttgcc gcattttccg
     6661 cagctgacgc ggatgcactt gaagaagcgg cttgcgccgc actgttgtct tgaggtttgc
     6721 aggcggcaag cgcggcaagt acgaaaacgc ccggcaaaaa ggaacgcggt acggaaaaca
     6781 tgacaatctc ccaagaataa atagcaaaac ctgattcgta cggaatttga atatttccat
     6841 cttaacgcgt ttggcagatt taatgtagta tttttttacg ttgtctgcac ggcaggaatt
     6901 gccgaatcat acagaatctt tggagcggaa agaacagtaa gattaaaata ataaaaattc
     6961 tatttaaaat caaaaataaa ataaaaacag ataaaataat ttcaaaaaaa aggtttacag
     7021 aatttcaaaa gccattataa tgacgacttc ttcaccagcc caggtggcga aattggtaga
     7081 cgcaggggac tcaaaatccc ccgccgcaag gtgtgtcggt tcgagtccga ccctgggcac
     7141 cacaaccgct tttagagcgg ttattttttt gtctattgct gtttaatgaa atagataaga
     7201 ctaaatatag tggattaaat ttaaaccagt acggcgttgc ctctccttgc cgtactattt
     7261 gtactgtctg cagcttcgtc gccttgtcct gatttttgtt aatccactat acaatcaata
     7321 tattaagtcg ttgttagccc tcttggttct gtcaatgccg tccaatacag tccggtgcaa
     7381 tgagccattt tcaggaagta tggttgggaa tatttttgat atatcaaaaa tgaaatcaag
     7441 ttcaatcaat atcccgagtc tttattggga tgaaaccctg taaattttac aattcttgat
     7501 atcgaagaag ggtttttcac atctgcccct cctacacaaa ctgtcaacaa tttccatctt
     7561 tcaaaaaagg tactcctgat tttattcttt taaaatcaat caataatttc tctgctttca
     7621 aaaaatatta taaagatgaa agatttttct tgattgaact gtcggtttgc gttatcgttt
     7681 ccactctttt tcacaaactc tgtgttcctt tccaattgat tggataatcc gtctgttgcc
     7741 gtgttccccc aatgcgcgta ccctaaatcg ctgcttggtg gaattgcatt acaggtgctg
     7801 tggcaaagcg gtttgtccct attggtttga aaccgtataa aagaggtcgt tatgcagcta
     7861 tcaggcgcgc aaatcatagt gcagagtctc aaagccgaag gtgtcgagta cgttttcggt
     7921 tatcccggcg gtgcggttat cgaaatctac gatgcccttt tccaactcaa taaattcaag
     7981 cacattctga cccgtcacga gcaggcggca gtacacgcgg cagatgcgta tgcgcgcgtc
     8041 agcggtaagg tgggcgtggc attggttaca tccggcccgg gcgttaccaa tgcactgacc
     8101 ggtattgcta ctgcctatac ggattcgatt ccgatggtgg tcatcagcgg gcaggtaggc
     8161 aattccctga ttggtacgga tgcgttccaa gaagttgata cggtgggtat tacccgtccg
     8221 tgcgtcaaac acaatttctt ggttacggat atcaatgagt tggcggaaac cattaaaaag
     8281 gcgttccaaa ttgccgcaag cggccgaccg gggcctgtgg tggttgatgt cccgaaagat
     8341 gttacgcagg cgatggcgaa attcagctat cctcaggaag acatttttat ccgttcgtat
     8401 caaccggttg ttcaagggca tatcggtcag attaaaaagg ccgtgcagat gttggcatct
     8461 gccaaacgtc cagtcgtcta ttttggcggc ggcgtggtgt tgggtaatgc ttctgaagag
     8521 ctgacccgat ttgtccgaat gacgggtgct ccgtgcacgg gtacgctgat gggcttgggc
     8581 gcttatcctt ccagcgaccg ccaattcctc ggtatgctcg gtatgcacgg tacttacgag
     8641 gcaaaccttg ccatgcagaa tgcggatgtc gttcttgccg taggtgcgcg ttttgacgac
     8701 cgtgtggttt ccgtaccgtc caaatttttc gagaaggcga agaaggttat ccatatcgat
     8761 gtcgatcctt ccagcatcgc caaacgcgtg aaggcggaca ttccgattgt cggcgacgtg
     8821 aaaaacgttt tgtccgagat ggttgcgctg tggcaaaaac aagagtccgt gccgtctgaa
     8881 gatactttgg gcaaatggtg gaaaaccata gaggaatggc gttcccgaga ttgcttgtgg
     8941 tttgacaacg gcagcgaaat tatcaagccc caatatgtga ttcagaagct tgccgagatt
     9001 accggcaatt cggcaatcat cacatcggat gtagggcagc atcaaatgtt tgcggctcaa
     9061 tattatccct tcgaacgtcc gcgccaatgg ctcaattccg gcggtttggg tacgatgggc
     9121 gtgggtctgc cttatgcgat tggtgcaaaa cttgccgccc cggatcaaga cgtattctgt
     9181 attaccggcg acggctcgat tcagatgaac atccaagagt tgtccacctg tttccaatat
     9241 cggattccgg ttaacgtcat tacgctgaac aacggttatc tcggtatggt acgccagtgg
     9301 caggaaatat attacggcgg ccgagagtcg gaaacttatt tcgattcttt gcccgatttc
     9361 gtcaaacttg ccgaggcata cggtcatatc ggcatccgcg tggacaagaa gtctgatgtg
     9421 gaaggtgcgt tgttggaagc attgaaccaa aaagacaggc tggtgtttat cgacttcctg
     9481 accgaccaga aacagaatgt gatgcccatg gtcggtaacg gcaaaggttt ggacgaaatg
     9541 gtacttccgc cgcatatgcg tgcggacgaa aaggcgtaag gagaggcaaa tgcgacatat
     9601 cttatctgtt ctgattgaaa acgaatcagg tgcgatgagc cgcgtggtcg gtttgttctc
     9661 tgcacgcgat tacaatatcg attctttggc ggttgcgccg accgaagaca aaaccctgtc
     9721 ccgtatgacc atcgttaccc acggcgacga gcaggtcatc gaacaaatca ccaagcaact
     9781 caataaattg attgaagtga ttaaagtggt cgatttgaac gaaagccgtt ttgtcgaacg
     9841 cgaactgatg ttggtaaaag tccgtgccgc cggcaaagac cgcgacgaat ttttacgctt
     9901 gaccgaaatc taccggggca gcatcatcga cgtaaccgac cgcagctata cgattgaaat
     9961 taccggctcg acagacaagc tggattcctt tttggaaacg gtcggacgcg cccaaatttt
    10021 ggaaaccgta cgcacaggcg cggccggcat cggtcgcggt gagcgtattt tgaaaattta
    10081 acgccgtaac ctttcagacg gcacggtatt tgaatgtcgt ctgaaaaacg aacggcagga
    10141 gagatttatg tcgaacatta aaattgtcgc actggttacc gtcaaaccgg aatacacaga
    10201 aacactggca gcacagttta aagaactggt caaagccagc cgtgcagaag agggcaacat
    10261 cagctacgat ctccatcagg aaatcggcaa accgaaccgt tttgttttcg tggaaaattg
    10321 gaaatcccaa gcagctattg acgaacataa cgccagcgcg catttccaag ccttcgtcca
    10381 gtccgtcgac ggcaaaaccg aagcgttgga aatcgtattg atgaatgaag ttgccgctta
    10441 agcggcacac tctgtttaac ccgtccgaag ccgctcaaca ttttaaggct tcgacaacca
    10501 tttaccttaa aggaaatcaa atgcaagtct attacgataa agatgccgat ctgtccctga
    10561 tcaaaggcaa aaccgttgcc atcatcggtt acggttcgca aggtcatgcc catgccgcca
    10621 acctgaaaga ttcgggtgta aacgtggtga ttggtctgcg ccaaggttct tcttggaaaa
    10681 aagccgaagc agccggtcat gtcgtcaaaa ccgttgctga agcgaccaaa gaagccgatg
    10741 tcgttatgct gctgctgcct gacgaaacca tgcctgccgt ctatcacgcc gaagttacag
    10801 ccaatttgaa agaaggcgca acgctggcat ttgcacacgg cttcaacgtg cactacaacc
    10861 aaattgttcc gcgtgccgac ttggacgtga ttatggttgc tcccaaaggt ccgggtcata
    10921 ccgtacgcag tgaatacaaa cgcggcggcg gcgtgccttc tctgattgcc gtttaccaag
    10981 acaattccgg caaagccaaa gacatcgccc tgtcttatgc ggctgccaac ggcggcacca
    11041 aaggcggtgt gattgaaacc actttccgcg aagaaaccga aaccgatctg ttcggcgaac
    11101 aagccgtatt gtgcggcggc gtggtcgagt tgattaaagc aggttttgaa accctgaccg
    11161 aagccggtta cgcgcctgaa atggcttact tcgaatgtct gcacgaaatg aaactgattg
    11221 ttgacctgat tttcgaaggc ggtattgcca atatgaacta ctccatttcc aacaatgcgg
    11281 agtacggcga atacgttacc ggccctgaag tggtcaatgc ttccagcaaa gaagccatgc
    11341 gcaatgccct gaaacgcatc caaaccggcg aatacgcaaa aatgtttatc caagagggta
    11401 atgtcaacta tgcgtctatg actgcccgcc gccgtctgaa tgccgaccac caagttgaaa
    11461 aagtcggcgc acaactgcgt gccatgatgc cttggattac tgccaacaaa ttggttgacc
    11521 aagacaaaaa ctgattgttt tcaaacggga ctgcctacac atcgtgtagg cagttt
//
LOCUS       DAWKOX010000053        11537 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.053, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000053 DAWKOX010000000
VERSION     DAWKOX010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11537
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.053"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            207..1640
                     /gene="lpdA"
                     /locus_tag="WJK78_001001"
     CDS             207..1640
                     /gene="lpdA"
                     /locus_tag="WJK78_001001"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ7597940.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDVKFDVAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELLTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            1735..2022
                     /locus_tag="WJK78_001002"
     CDS             1735..2022
                     /locus_tag="WJK78_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597941.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            2121..3287
                     /gene="sucC"
                     /locus_tag="WJK78_001003"
     CDS             2121..3287
                     /gene="sucC"
                     /locus_tag="WJK78_001003"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ7597942.1"
                     /translation="MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVQGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            3298..4188
                     /gene="sucD"
                     /locus_tag="WJK78_001004"
     CDS             3298..4188
                     /gene="sucD"
                     /locus_tag="WJK78_001004"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ7597943.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(4284..4751)
                     /locus_tag="WJK78_001005"
     CDS             complement(4284..4751)
                     /locus_tag="WJK78_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7597944.1"
                     /translation="MDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPYTKNLSAGKQRRNERGIWQRRFYEHTVRDETDLQCYADYIHSNPIKQRMSRA
                     KTESCKNNISLFKCDTYHSLTSKKYVQPDLRVCSCLTDKYSDCLKGQKIMWVC"
     gene            complement(4723..4866)
                     /locus_tag="WJK78_001006"
     CDS             complement(4723..4866)
                     /locus_tag="WJK78_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597945.1"
                     /translation="MARYRRNFIAGGTFFFTVKLADPKSRLLVEHIGFAYGLYGCAKT
                     ISL"
     gene            complement(5152..6354)
                     /gene="dcm"
                     /locus_tag="WJK78_001007"
     CDS             complement(5152..6354)
                     /gene="dcm"
                     /locus_tag="WJK78_001007"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ7597946.1"
                     /translation="MLIPQTSLFDQENNRIISQRKLLEQSLLQGIPLNELIRQNQMSY
                     DDLIYIHHDKKPFEKRKNLVLSDFQKKENHIPIISFFSGAGGLDLGFEAAGFQHSMLI
                     EKIPLFCDTLRLNRPNWSVFNADVSETEEMVELIRNNIGSLSFDGVFIGGPPCQPFSI
                     ASNQRFSKTDKNFKRVGFEHKQNGNLLFNYVELIKIFRPKVFLIENVSGLMDIDNGKQ
                     LASVYCDLQQQGYSLYKPQIINSEYFHVPQQRIRLFIIGYLGDKKFSPLQPTNTPLAC
                     GNTFEIPIINQHNHITREHSAESILRYMELAYGQRDKKGRVDRLDPSKPSKTIIAGGT
                     KGGGRSHLHPYIPRTLSVRESARLQTFPDDYIFTGAVARQFTQVGNAVPPILAAQLAT
                     AIKHSYFE"
     gene            complement(6367..7551)
                     /locus_tag="WJK78_001008"
     CDS             complement(6367..7551)
                     /locus_tag="WJK78_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ7597947.1"
                     /translation="MIEWRFDQGRLDYFRFDEIKKIAKGLYGINQCPKPRAKDIDIVR
                     LSLTQETNLPFAPNSSQYPVWRNYGRVFKCLLLATEHNGLICTTDLCADLVQNDEISC
                     DDYLLHFATHFSYPSPAFSGYQPSENRVFPVLAIIRALISKYKETGVNFLDMDEIIYK
                     IASNNSITGIASFSFSQLIMNKEAIKYDPRQIRELVKFISQFSFLSWYENKLFLDITD
                     FSELHLLENQFIADTQPQERLDSLEIMRLGKTNNNFLLMNEIVSLSIDDQAFSEGGKI
                     KVTHLITERNSILRKIYFSKTQNAQICRMCGLDTQRSYEWSEHIIEVHHLLPLSSPVR
                     VEDKTTSLKDLVGICPTCHRATHKYYTFWLNLHKKKDFVSYEEAYHVYEEAKSKVKRI
                     YK"
     gene            complement(7593..10442)
                     /gene="uvrA"
                     /locus_tag="WJK78_001009"
     CDS             complement(7593..10442)
                     /gene="uvrA"
                     /locus_tag="WJK78_001009"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ7597948.1"
                     /translation="MCNHHPQHSHDNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKANIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDSEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHQ
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSITGQYLSGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDSGGRIIAQGSPEEVAKVKGSYTGKYLKVVLG"
     gene            10597..11394
                     /locus_tag="WJK78_001010"
     CDS             10597..11394
                     /locus_tag="WJK78_001010"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ7597949.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLTAP
                     QIESEPESEPALQTAPVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
BASE COUNT         2979 a         2621 c         2908 g         3029 t
ORIGIN      
        1 tagatgtagc gtaatgtagt atcgtgctac aataggctca acaaacgatt gagaccgtct
       61 gaaacatttg attcgaatga atcggcagat atggactttc agacggcttt ttcttaaaac
      121 catcaaaacg cagtcattca aaataaaaaa gaaacgaaaa gtatcgtttt tattttgaga
      181 tactgctaaa agcaaaggat gacacgatgt ctcaatatga tgtagtagtg attggtgcag
      241 gcccgggcgg atacgttgcc gccatccgtg ccgcacaact gggtttcaaa actgcctgtg
      301 tcgatgcagg cgttaacaaa gcaggcaatg cccctgcatt gggcggtact tgcttgaacg
      361 taggttgtat cccttctaaa gccctgttgc aatccagcga acatttccac gcagcgcaac
      421 acgagtttgc cgaacacggt atcactgtcg gcgacgtaaa attcgacgtg gccaaaatga
      481 ttgagcgcaa agatgccatc gtaaccaaac tgaccggcgg cgtgaaattc ctgttccaga
      541 aaaacaaagt aaccagcctg ttcggtacgg cttcctttgc cggcaaaaat ggcgatgctt
      601 accaaatcga agtcgataac aaaggtgaga aaaccgttat cgaagccaaa cacgtcatcg
      661 tagcgaccgg ttccgtaccg cgtccgctgc cacaagtcgc tatcgacaat gtgaacgtat
      721 tggacaacga aggcgcattg aacctgaccg aagtacctgc caaactcggc gtgatcggtt
      781 ccggtgtgat tggtttggaa atgggttccg tatggaaccg cgtgggtgcg gaagttacca
      841 ttcttgaagc cgcgccgacc ttcctggctg ccgccgacca acaaatcgcc aaagaagcct
      901 tcaaatactt caccaaagag caaggtctga gcatcgaatt gggcgtgaaa atcggcgaca
      961 tcaagtctga aggcaaaggt gtttccgttg cttacgaaac tgctgccggc gaagccaaaa
     1021 ccgaagtatt cgacaaactg atcgttgcca tcggccgtat tccaaacacc aaaggcctga
     1081 acgccgaagc cgtaggcttg gaaaaagacg agcgcggctt tatcaaagta gatggcgaat
     1141 gccgtaccaa cctgcctaac gtatgggcaa tcggcgacgt ggttcgcggc ccgatgttgg
     1201 cacacaaagc cagcgacgaa ggcgttgccg ttgccgaacg cattgccggt caaaaaccgc
     1261 atatcgactt caacaacgta ccgttcgtga tttacaccga tcctgaaatc gcttgggtgg
     1321 gtaaaaccga agagcagctc aaagccgaag gcgtggagta caaaaaaggt acttcaggtt
     1381 ttggtgcgaa tggtcgcgca ttggcaatgg gcaaagccaa aggtacggtt aaagtgttgg
     1441 cagacgccaa aaccgaccgc atcttgggcg tacacatgat tggtccggtt gtcagcgaat
     1501 tgcttaccga aggcgtgact gcgctcgaat tcttcgccag cagcgaagac atcgcccgca
     1561 ttatccatgc ccacccaacc ttgtccgaag tggttcacga agctgcattg gcggccgaca
     1621 aacgcgcttt gcacggttga tagacattaa ggcctccgac aaattgaatg ttccgagagc
     1681 ttcgttttct gatttataat tccgtcagac aaacaaacag catttacatt cgttatgaac
     1741 aaagaaatag tcggtatttt ctttataccg atgggcatca tcagcatgtg tatggccgca
     1801 ttgtggcaga tgtatgtgat gatgaccgaa acttatacgc tcaaccgttt caaagataaa
     1861 gaattggttt ggcgcgtggc attgttgttt atcagtttca gccttgccgt ttatctgctc
     1921 tgtccgaatt cgcgtaaaaa aggcattgtc ttttttattc tcgggggagg cggtgcagcc
     1981 atgtatctgc tggcgcggat gtggttgcct ttcagcaagt gaaacgacga ttttccgacc
     2041 gccgaaaggt agtctgaaac gcacgggctt gccatttgga ggcaaactcg gggcattaca
     2101 ctaatctaaa ggagaaatcc atgaatttac acgagtatca ggctaaagaa ctgctggctg
     2161 gctacggttt gcccgtacaa ggcggtattt tggcacacaa cggcgaagaa gccgctgcag
     2221 cttacgacaa attgggcggc aaattcgctg ttgtcaaagc acaagtacac gccggcggcc
     2281 gcggtaaagc gggcggcgta aaagtcgtta aaagccgcga agaagctaaa gaagtggctg
     2341 aaagcctgat tggcaccaac ttggtaactt accaaaccga tgccaacggt caacctgtca
     2401 acagcgtttt ggtttgcgaa gatatgtatc cggttcaaac cgagctgtac ttgggcgcag
     2461 tggttgaccg ttctacccgc cgcgttacat tcatggcttc taccgaaggc ggtgtggaaa
     2521 tcgaaaaagt tgctgccgaa actccagaaa aaatcttcaa agtaaccgtt gatccgctgg
     2581 tcggcctgca accttgccaa gctcgcgaag ttgccttcca actgggcttg aaagacaaac
     2641 aaatcaacga gttcgtcaaa ctgatgaccg gcgcgtacaa agcgtttgtc gaaaacgact
     2701 tcgccctgtt tgaagtcaac ccgctggcag ttcgcgaaaa cggcgcactg gcttgcgtgg
     2761 acggcaaaat cggcatcgac agcaacgcgc tctaccgcct gccgaaaatc gccgaattgc
     2821 gcgacaaatc tcaagaaaac gaacgcgagc tgaaagcttc cgaattcgac ctgaactatg
     2881 ttgccctgga aggtaatatc ggctgtatgg ttaacggtgc cggtttggcg atggccacca
     2941 tggacatcat caaactgaaa ggcggccaac ctgccaactt cttggacgtt ggcggcggcg
     3001 caaccaaaga ccgcgtggtt gaagcgttca aactgattct ggaagacaaa tccgttcaag
     3061 gcgtattgat caacatcttc ggcggtatcg tacgttgcga catgattgcg gaagctatcg
     3121 tggcagccgt taaagaaatc aacgtcgacg ttcctgtcgt tgttcgtttg gaaggcaaca
     3181 acgccgaact cggcgcgaaa atcctgaacg aatcaggcct gaaactgact tctgcagacg
     3241 gcctgaatga cgcagccgaa aaaattgttg cagccgtaaa cgcctaagga gaaaagaatg
     3301 agcgtattga ttaataaaga caccaaagta ttggttcaag gtttcaccgg taaaaacggt
     3361 actttccact ccgaacaagc tctggcttac ggcactaaag ttgtcggcgg cgttaccccg
     3421 ggcaaaggcg gtcaaaccca cctgaacctg cctgtattca acaccatgaa agaagctgtt
     3481 aaagaaaccg gcgcggatgc atccgtaatt tacgttcccg ctccgtttgt gttggattct
     3541 atcgttgaag ccgttgattc aggcgtaggc ttggtcgttg tgattaccga aggcgtacct
     3601 actttggaca tgctcaaagc caaacgttat ttggaaacca acggcaacgg tacccgtttg
     3661 gtcggcccta actgcccggg cgtgattact ccgggcgagt gcaaaatcgg tattatgccg
     3721 ggccacatcc acactccggg ccgcatcggt attatttccc gttccggtac attgacttac
     3781 gaagccgtgg cacaaaccac caaactgggc ttgggtcaat caacctgtat tggtatcggc
     3841 ggtgacccga ttcctggtat gaaccaaatc gacgcactga aacttttcca agaagaccca
     3901 gataccgacg ccatcatcat gatcggtgaa atcggcggta ctgcggaaga agaagcagcc
     3961 gaatacatcc aatccaacgt aaccaaacct gttgtaggtt acattgctgg tgttaccgct
     4021 cctaaaggca aacgtatggg ccacgccggt gcgattattt ccggcggcaa aggtactgcc
     4081 gaggaaaaat tcgccgcttt cgaaaaagcc ggtatcgctt acacccgcag ccctgccgag
     4141 ttgggcacga cgatgctgga agtgttgaag gcaaaaggtt tggcataatc aggtttgaca
     4201 actgattaaa catcaaatgc cgtctgaaac cggaaatcgg gtttcagacg gcattttgtt
     4261 tgtcatttca aaaagaggca gcctcaacat acccacatta ttttttgccc tttgaggcag
     4321 tcagaatatt tatcggtcaa acaggagcaa acccgtaagt caggttgcac atattttttt
     4381 gaagtcaggg aatgataagt atcgcatttg aaaagactga tattattttt gcaggattct
     4441 gttttagcac gcgacattct ttgtttgata ggattagaat ggatatagtc cgcgtaacac
     4501 tgcaaatccg tttcatcgcg cacggtgtgt tcgtaaaaac gccgttgcca aataccgcgt
     4561 tcgttccgcc gctgtttgcc ggcggataag tttttagtat aaggggaata tgcggagaat
     4621 ttggttttaa tcagccgccg gagtagggaa taatccgcat cgtcgggcgg cagcgtccaa
     4681 atggcgtgga tatggttcgg cagcacgcat acggcgacgg tttcaaaggg atattgtttt
     4741 tgcacatcca tataagccgt acgcgaagcc gatatgttcg acaagcaggc gcgatttcgg
     4801 gtcggcgagt ttgacggtga aaaagaatgt gccgccggca atgaagtttc tgcgataacg
     4861 cgccatagga tttttgtttg tggtttgggt gttggagaag gaatggtttg ttgtttaagg
     4921 ttttaacttt gttggagctg atgttttcag acgacattgg aggccgtctg aaagcgctgg
     4981 cttcaacgaa gttaaaagtt ggaacggcaa accgttaatc aaccaaccgc gtacgtaccg
     5041 cacacacact gcacgttggc tttgaagttt cgtagactca caggtaggtg tggcgcaacc
     5101 acgcatacgg tgggttgggt ataaaggcta caacttgcta tagcttgctt gctattcaaa
     5161 ataagaatgc ttaattgctg ttgctaattg agcagcaagg atgggaggaa cggcattacc
     5221 aacctgcgtg aattgccgcg caaccgctcc tgtaaaaata taatcatcag gaaacgtttg
     5281 taatcgtgca ctttcacgaa cagataacgt tcttgggata tatggatgta agtgagacct
     5341 tcctccacct ttagtgccac cagcaataat agttttagat ggtttgcttg gatctaacct
     5401 atctacacgt ccctttttat cacgttgccc ataagctaat tccatatagc gtaaaatcga
     5461 ttcagccgaa tgttctcttg taatatggtt atgttggtta ataattggaa tttcaaatgt
     5521 attaccacat gccaatgggg tattggttgg ttgtagcgga ctaaattttt tatctcctaa
     5581 ataaccaatt ataaatagcc taattctctg ttgaggtaca tgaaaatatt cagaattaat
     5641 tatttgaggt ttatagagtg agtagccttg ctgctgtaaa tcacaatata cactagctaa
     5701 ctgtttacca ttatctatat ccatcaatcc agagacattt tcaataagaa atactttagg
     5761 acgaaaaatc ttaatcaatt caacgtaatt aaataataga ttaccatttt gcttatgctc
     5821 aaagccgaca cgtttaaaat ttttatcagt ttttgagaat ctctggtttg aggctatgga
     5881 gaaaggctga cagggaggac ctccaataaa tacaccatca aaacttaaag acccaatatt
     5941 atttctgatt agttcaacca tttcttctgt ttcagaaaca tcagcattaa acacagacca
     6001 attagggcga ttaagacgca atgtatcaca aaataaaggt attttttcaa tcagcataga
     6061 atgttgaaag cctgctgctt caaaccctaa gtctaatcca ccggctcctg aaaaaaaact
     6121 aattatcgga atgtgatttt cctttttttg aaaatcactt agaaccaaat tctttctctt
     6181 ttcaaaaggc tttttatcat gatgaatata aattaaatca tcatagctca tttgattctg
     6241 gcgtattagt tcattcaatg gaataccttg taataaactt tgttctaata attttctttg
     6301 tgaaataatt ctattatttt cttggtcaaa taaagaggtt tgcggtatta acatagatac
     6361 tcctatctat ttataaattc ttttaacttt acttttagct tcttcatata catgatatgc
     6421 ttcttcataa ctaacaaaat cttttttctt gtgcaaatta agccaaaaag tatagtactt
     6481 gtgtgtggca cgatgacagg ttggacagat accaaccaaa tcttttaatg aagtagtttt
     6541 atcttctacc cttacaggag aagatagtgg taatagatgg tgtacttcaa tgatatgttc
     6601 gctccattca tagctccttt gcgtatctaa tccacacatg cgacatattt gtgcattttg
     6661 ggtcttgcta aaatagattt ttcttaaaat actattacgt tctgtaatta aatgggtgac
     6721 tttaatttta ccaccctcac taaacgcctg atcatcaata gataatgaaa cgatttcatt
     6781 catcaataag aaattattat ttgtcttacc caatctcatt atctctaaac tatctaatct
     6841 ttcttgtggt tgtgtatctg caataaattg gttttctaat aaatgtagtt cactaaaatc
     6901 tgtaatatct aaaaacaact tattttcata ccaagacaaa aaagagaatt gactaataaa
     6961 ctttaccaac tctctaattt gacgaggatc atatttaatt gcttctttat tcataattaa
     7021 ctgtgagaat gaaaaagaag caatacctgt aatactatta ttactagcga ttttgtaaat
     7081 aatttcatcc atgtccaaaa aattaactcc tgtttcctta tattttgaaa ttaaagctct
     7141 aataattgcc aaaacaggga aaacccgatt ttcagatggt tgatatcctg aaaaagctgg
     7201 tgatgggtag gaaaaatgtg ttgcaaaatg tagtaaataa tcatcgcaac taatttcatc
     7261 attctgaact aaatcggcac ataaatctgt agtacagatt aacccattat gctccgttgc
     7321 gagtaacaaa catttaaaaa cacgaccata attacgccaa actggatatt gtgaactgtt
     7381 aggggcaaaa ggtaagtttg tctcttgagt caggcttaat cttacaatat caatatcttt
     7441 tgcacgtggc tttggacatt gattaattcc atataatcct tttgcaattt ttttaatttc
     7501 atcaaatcta aaataatcta atctaccttg atcaaaacgc cattcaatca tttttaacct
     7561 ctatgaaata tcatttttca gtaatctgaa aattatccta aaaccacctt caaatacttc
     7621 ccagtataac tccccttaac cttcgccact tcctcagggc taccttgggc aataatcctc
     7681 cccccgctat cgccaccttc cggtcctaaa tctacaatcc aatccgcagt tttaatcaca
     7741 tccagattat gctcaataat cacaatcgag ttgcctttgc ctttcagacg gcctatgact
     7801 tccagcagca gggcgatgtc ggcgaagtgc aggccggtgg tgggttcgtc gaggatgtag
     7861 agcgttctgc cggtgtcgcg tttggagagt tccaaggcga gtttgacgcg ctgggcttcg
     7921 ccgccggaga gggtggtggc ggactggccg aggcggatgt agccgagacc tacgtccatc
     7981 agggtttgca gtttgcgcga tacggtgggg acggcgtcga aaaattcgcg ggcttcttcg
     8041 acggtcatgt cgaggacttg gctgatgttt ttgcctttgt attggatttc gagggtttcg
     8101 cggttgtagc gtttgccgtg gcagacttcg caggggacgt acacgtcggg caggaagtgc
     8161 atttcgactt taatcacgcc gtcgccttgg caggcttcgc agcggccgcc tttgacattg
     8221 aaggagaatc tgccgacgtt gtagccgcgt tcgcgcgaga gggggacgcc ggcgaagagt
     8281 tcgcggatgg gggtgaacag gccggtgtag gtggcggggt tggagcgcgg ggtgcggccg
     8341 atgggggatt ggtcgacgtt gatgactttg tcgaggtgtt cgaggccgcg gatgtcgtcg
     8401 tatggggcgg gttcttcttg ggcgcggttg agttcgcggg cggtgatttt ggcgagggtg
     8461 tcgttaatca gggtggattt gccgctgccg gatacgccgg tgatgcaggt aatcaaaccg
     8521 agcggcagtt cgagggtaac gtttttgagg ttgttgccgc gcgcgccttt gaggacgagc
     8581 atccggtcgg gattgacggg tgtgcgttca gacggcacgg caatggattt tttgccgctg
     8641 aggtattgtc cggtaatgga gttttcgcat ttggcgacgt tttcgggtgt gtcggcaatc
     8701 agtacgttgc cgccgtgttc gccggcgccc gggcccatat cgacgacgaa atcggcttcg
     8761 cggatggcat cttcgtcgtg ttcgaccaca atcacgctgt tgcctaaatc gcgcaggcgt
     8821 ttgagggtgg cgagcaggcg gtcgttgtcg cgctggtgca ggccgatgga gggttcgtcc
     8881 aaaacgtaca ttacgccggt caggccgctg ccgatttggc tggcgaggcg gatgcgctgg
     8941 gcttcgccgc cggaaagggt ttcggcggaa cgggagagat tcaggtaatc cagcccgaca
     9001 ttaatcaaaa agccgagacg ttcggtgatt tctttgagga ttttttcggc gatttgtttt
     9061 ttgttgccgt ctaaatccag tgtttcaaag aattggtggg ttttggtgag cggccaggcg
     9121 gaaacttcgt gcaacggctc accgctgacg taaacgtagc gggcttcttt gcgcaaacgt
     9181 gcgccgccgc agctcgggca ggcgcggtgg ttttggtatt cgcgcagttt ttcgcgcacg
     9241 gtttcgctgt cggtttcgcg gtagcggcgt tcgagattgg ggatgatgcc ttcgaaggcg
     9301 tggctgcggt tgaaggtggt gccgcgttcg gacaggtaag tgaaatcaat gacttccttg
     9361 cccgagccgt gcaacacgac ttttttgatt tttgcaggta gggtttccca agcagcctgc
     9421 acgtcgaaac cgtaatgccg cgccagcgac tgaatcattt ggaaatagaa ctggttgcgc
     9481 ttgtcccagc cgtcaatcgc gcccgaagcc agcgacaatt cgggatgcgc gaccactttt
     9541 tcggagtcga agaaattggt gttgcccaag ccgtcgcaag tcgggcagga gcccatcggg
     9601 ttgttgaacg aaaagaggcg cggctccaat tcgggcaggc tgtacgaaca tacggggcag
     9661 gcgaaacgcg cggaaaacca atgctcttcg ccgctgtcca tttccatcgc cagcgcgcgc
     9721 tcgttgccgt ggcgcagcgc ggtttcaaaa ctttccgcca gccgctgctt gatgttcgcc
     9781 ttcactttca cgcggtcgat gaccacgtcg atattgtgtt tgatgttttt ttccagcttc
     9841 ggcacttcgt caagctgata gacctcgccg tccacgcgca cacgggcaaa gccttgcgcc
     9901 tgcaagtcag caaagaagtc gacaaactcg cccttacgct cacgaactgc cggcgcaaga
     9961 atcatcacgc gcgtgtcttc cggcagtttt aatacggcat cgaccatctg agatacggtt
    10021 tggctggata gcggcagatt gtgttcgggg caatacggcg tgccgacgcg tgcgtacaaa
    10081 aggcgcaggt aatcgtggat ttccgtaacc gtgccgacgg tggaacgcgg attgtggctg
    10141 gtggatttct gctcgatgga aatcgcgggc gacagaccct cgatcaaatc gacatcgggt
    10201 ttgtccatca tctgcaaaaa ctgccgcgca taggcggaca ggctctcgac ataacgccgc
    10261 tgtccttcgg catacagcgt gtcgaacgcc agcgatgatt tgccgctgcc tgacaatcct
    10321 gttaccacca ccagcttgtg gcgcggaatg tctaaatcga cgtttttcaa attatgcgtg
    10381 cgcgcgccgc gtatgcggat ggtgtcgttg tcgtgcgaat gttggggatg atggttgcac
    10441 ataatggatg ccgcctgaaa aataaaggaa aactggtatt atagcacttt ctcggatgcc
    10501 gtctgaagcc gcgttcagac ggcatttgtc ggcggagtac ggcagattcc gctataatgt
    10561 cggcaatttt aacccgcttg aacaaaagga tgacaaatga accgtcttta cccccacccg
    10621 attatcgccc gtgagggctg gccgattatt ggcggcggtt tggctttgag cctgctggtg
    10681 tcgatgtgtt gcggctggtg gtctttgccg ttttgggtgt ttaccgtatt tgccctgcag
    10741 tttttccgcg accctgcgcg tgagattccg caaaatcctg aagcagtgtt gagtccggtt
    10801 gacggccgta tcgtggtggt cgagcgcgca cgcgatccgt atcgtgatgt cgatgctttg
    10861 aaaatcagta tttttatgaa cgtgttcaac gtgcattcgc aaaaatcgcc tgccgattgt
    10921 acggtaacga aagtggtcta taacaaaggc aaattcgtga atgcggattt ggacaaagcc
    10981 agcacggaaa acgaacgtaa tgcggtgttg gcgactacgg cttccggtcg tgaaattact
    11041 tttgttcaag tggccggttt ggtggcgcgc cgtattttgt gctacaccca agcaggtgcg
    11101 aaactgtccc gcggcgaacg ttatggcttt atccgcttcg gttcgcgcgt ggatatgtat
    11161 ctgcctgtcg atgcgcaggc gcaagtggcg attggcgata aagtaactgg cgttagcact
    11221 gtattggcgc gtttgccgct gactgcgccg caaatcgaat ccgagcctga gtctgagcct
    11281 gctttacaaa ctgctccggt tgaaacagcg gcaaacccat ctgccgaaca acggcaaatc
    11341 gaggcagcgg cggctaagat tcaggcggct gtgcaagatg tgttgaaaga ttaattttgc
    11401 gaactgaaat agaaaatatc agtaccatca ttcacacgaa tgaggaagtt tggttttttg
    11461 aatttttgct aatgttcaca ccgttatgtt cacgaaaatg ggaatctgga aatttaacgt
    11521 tacggtgatt tatcaga
//
LOCUS       DAWKOX010000054        11465 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.054, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000054 DAWKOX010000000
VERSION     DAWKOX010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11465
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.054"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            500..1801
                     /gene="bioA"
                     /locus_tag="WJK78_001011"
     CDS             500..1801
                     /gene="bioA"
                     /locus_tag="WJK78_001011"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ7597950.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQMKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLRAKQNMATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNLTSRFDDEWDEADLQPVRALFEAHHTDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKCRLKTAWDIRGVKDVRVLGAIGVIELEKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1798..2445
                     /gene="bioD"
                     /locus_tag="WJK78_001012"
     CDS             1798..2445
                     /gene="bioD"
                     /locus_tag="WJK78_001012"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ7597951.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGVLAKQLLQQGKSVITQKPVQTGC
                     QNIADDIAVHRKIMGKPMQEADKQGLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLYSLVFNHIHDSRDAHIAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2412..2642
                     /locus_tag="WJK78_001013"
     CDS             2412..2642
                     /locus_tag="WJK78_001013"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597952.1"
                     /translation="MDGVGKNRRGIKIGKNMEHLYDEYGNTTPNRRTTNKKDETISSK
                     VTVAAIPVAAPFAIADIVDQDFIQAIMKITGH"
     gene            2666..3052
                     /locus_tag="WJK78_001014"
     CDS             2666..3052
                     /locus_tag="WJK78_001014"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597953.1"
                     /translation="MKCYIKVVIIVFIMVMTTSCNPCFFATSSCDYSFRKNYPINSDD
                     EYYVKNNTSKETRIADLRYCISYACPEVYQKYQLPDENGDYREIIRRKYKDDYKKGYK
                     NADDVMTCYGKIGECMKNNKGYSTKW"
     gene            3046..3489
                     /locus_tag="WJK78_001015"
     CDS             3046..3489
                     /locus_tag="WJK78_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597954.1"
                     /translation="MVMFRLLSTALVLLIMQGCYYTTIDNEKCFVAPQSVHCPVSSDI
                     ENVIRKNPNKSINQVRSDIKYCANMYFSNIRELNIPQDFDNYIFMLKEKGIPRNDKEL
                     AYNAVRNMHIICLSSLGGYDYYQKTAEFQKIDYKKEMEKLLNENH"
     gene            3671..3943
                     /locus_tag="WJK78_001016"
     CDS             3671..3943
                     /locus_tag="WJK78_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597955.1"
                     /translation="MTIRANNDIEYFVKNNTTNEQRIDDFRSCLSVACPEIYKLYQLP
                     DEKGNYQYIIKKYYDNKYNDNAVKSTNCIGDNARCMLNNKGYSTKW"
     gene            3946..4422
                     /locus_tag="WJK78_001017"
     CDS             3946..4422
                     /locus_tag="WJK78_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ7597956.1"
                     /translation="MGYGFEEWLPDLPAPVSDGIGLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            4452..5342
                     /gene="ubiA"
                     /locus_tag="WJK78_001018"
     CDS             4452..5342
                     /gene="ubiA"
                     /locus_tag="WJK78_001018"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ7597957.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVGKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            5527..5976
                     /gene="ptsN"
                     /locus_tag="WJK78_001019"
     CDS             5527..5976
                     /gene="ptsN"
                     /locus_tag="WJK78_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ7597958.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            5978..6940
                     /locus_tag="WJK78_001020"
     CDS             5978..6940
                     /locus_tag="WJK78_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ7597959.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            6921..7775
                     /gene="rapZ"
                     /locus_tag="WJK78_001021"
     CDS             6921..7775
                     /gene="rapZ"
                     /locus_tag="WJK78_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ7597960.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLPSR"
     gene            7856..8797
                     /gene="ylqF"
                     /locus_tag="WJK78_001022"
     CDS             7856..8797
                     /gene="ylqF"
                     /locus_tag="WJK78_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ7597961.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTCAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGKKPSEA"
     gene            8898..9500
                     /locus_tag="WJK78_001023"
     CDS             8898..9500
                     /locus_tag="WJK78_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ7597962.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            9684..11357
                     /gene="recN"
                     /locus_tag="WJK78_001024"
     CDS             9684..11357
                     /gene="recN"
                     /locus_tag="WJK78_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ7597963.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQEQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         2972 a         2692 c         2989 g         2812 t
ORIGIN      
        1 gggctgtaac cttcaatcgg aatttgttgc ctgcgggata tgcggtatga atgtttggga
       61 tatatggggc aggatggtgg aaatctatca taagtataag aagccgtgcc tggttttggc
      121 ggtggatttt gtgatgggta tggtattcat agagccgaat gaggagctgt gcatcggtag
      181 atgctatgcg cctatgtcgg agtcccctga ttttgctaac gctgttgcga tggctgttgc
      241 tatgatctgt atcgtatgga ttgccgtttt gtctatgact gattgaagcg ttgggcggag
      301 gctgtgtgaa acaatattgg gcgttgggtc gtctgattcc aatcgggctt ggggaatgcg
      361 aaacggtgtg cgcttatact gcggacgatt tgttgcgtgg ttttacgccc gaaacggatg
      421 gaaaggtgtg ggaagcggtc tgtcggagta gaatacgcgt tttgcgtttg aatgcagcaa
      481 taagaaaaga gagaaactta tgccgtctga acatcaacac acatcatcat tgcttgattt
      541 cgaccgtacc catctgctcc atccctatac ttccatgacc gatccgcttc ccgtttatcc
      601 tgtcaaacgt gcagaagggg tgtttatcga attggcggac ggcacgcggc tgattgacgg
      661 gatgtcgtct tggtggtgtg cgatacacgg ttacaatcat cccgttttga atcaggcggt
      721 tgagacgcag atgaaacaga tgtcgcatgt gatgttcggc ggtttgacgc atgagccggc
      781 ggtggagctg ggcaaattgt tggtcgggat tttgccgcag gggctggatc gtatttttta
      841 tgcggattcg ggttcggttt cggtggaagt cgcgttgaag atggcggtgc aataccagca
      901 ggcgcggggt ttgcgtgcaa aacaaaatat ggcgacggtg cggcgcgggt atcacggcga
      961 tacttggaac gcgatgtccg tctgcgatcc ggaaacgggg atgcaccata ttttcggcag
     1021 cgcgttgccg cagcgttatt ttgtcgataa cctgacaagc cgtttcgacg atgaatggga
     1081 cgaggcggat ttgcagcctg tccgcgcctt gtttgaagcg catcatacgg acattgccgc
     1141 ctttattttg gaaccggtcg tgcagggcgc gggcggtatg tatttttatc atccgcagta
     1201 tcttcgcgga ttgcgcgatt tgtgcgacga gtttgatatc gttttgattt ttgatgaaat
     1261 cgccaccgga ttcgggcgca cgggcaagat gtttgcctgc gaacacgcgg aggtcgtgcc
     1321 ggatattatg tgcatcggca agggtttgag cggcggctat atgacgctgg cggcagcaat
     1381 cacttcgcaa aaagttaccg aaacgatttc gcgcggagaa gcgggcgtgt tcatgcacgg
     1441 cccgacattt atggcgaacc cgctggcgtg tgccgttgcc tgcgcttcgg tcaaactgct
     1501 tttgtcccaa gattggcagg caaatatccg ccgcatcgaa agcatcttaa aatgccgtct
     1561 gaaaaccgcg tgggacattc gtggtgtgaa agacgtgcgc gttttgggcg ccatcggcgt
     1621 gatcgagttg gaaaaaggcg tggatatggc gcgttttcaa gcggattgcg tggcgcaggg
     1681 catttgggtg cgcccgttcg gcaggttggt gtatctgatg ccgccttaca tcatttcaga
     1741 cggcgttttg accaaacttg ccgacaaaac cgtgcaaatc ttgaaggaac acagcaaatg
     1801 aaaggcgttt acttcgtcag cggcatagac acggacatcg gcaaaaccgt cgccaccggc
     1861 gtgttggcaa aacaattgtt gcagcagggc aaaagcgtga ttacgcaaaa gcccgtgcaa
     1921 accggttgcc aaaacattgc cgacgacatc gccgtccatc gtaaaatcat gggtaaaccc
     1981 atgcaggaag ccgacaaaca agggctgacc atgcctgaaa tcttcagtta tccagcttcg
     2041 cctcatctcg ctgcccgtct tgacggcagg gctttggact tggacaaaat ccgcaccgcc
     2101 acacaagaat tggcggcgca gtacgaagtc gttttggtcg aaggcgcggg cggattgatg
     2161 gttccgctga cggaaaacct gttaaccatt gattatatcc gtcagcaagg ctatcccgtc
     2221 atcctcgtta ccagcggacg gcttggcagt atcaaccaca ctttactcag tttcgcagcg
     2281 ctcaaacaat acggcattcg cttgtacagc ctcgtgttca accacatcca cgacagccgc
     2341 gacgcacaca tcgcccaaga cagcctgagc tacttgaaat gccgtctgaa agccgatttt
     2401 tccgaagcgg aatggatgga gttggcaaaa acagacgcgg tataaagatt gggaaaaata
     2461 tggaacacct atatgatgaa tatggaaata caacgccaaa tagaagaaca acaaataaaa
     2521 aagatgaaac tatttcaagt aaagtaactg ttgcagcgat accagtagcc gctccatttg
     2581 ctattgctga tatagtcgat caggatttta tccaagcgat tatgaaaatt actggtcatt
     2641 gattatctat atattggtgg ttgttatgaa atgctatatt aaagttgtca ttattgtttt
     2701 tataatggta atgacaactt cttgtaatcc ttgctttttt gcaacttctt cttgtgatta
     2761 ttcttttaga aaaaactatc ctataaatag cgacgatgaa tattatgtta agaataatac
     2821 gagcaaagaa acaagaattg cggatttacg ctattgtatt tcttatgcat gtccagaagt
     2881 ttatcaaaaa tatcaactac cagatgaaaa tggagattat agggagatta ttcgtagaaa
     2941 atataaagat gattataaaa agggctataa gaatgcagat gatgtcatga catgctacgg
     3001 aaagattgga gaatgcatga aaaataataa aggatattca acaaaatggt aatgttccgc
     3061 ttattatcaa cagcccttgt attgttgata atgcagggct gttattacac aactattgat
     3121 aatgaaaaat gctttgttgc cccacaaagc gttcattgtc ctgtaagttc tgatattgaa
     3181 aatgttatta gaaaaaatcc taataaaagc ataaatcaag ttaggagtga tattaaatat
     3241 tgtgctaata tgtatttttc caatatacgg gaattaaata ttccgcaaga ttttgataat
     3301 tacattttca tgcttaaaga aaaaggtatt ccaagaaatg ataaggaatt ggcttataat
     3361 gcagttagaa atatgcacat tatttgtttg agttctttgg gtggttatga ttattatcaa
     3421 aaaaccgcag aatttcagaa aatagattat aaaaaagaaa tggagaaatt gttaaatgaa
     3481 aaccattaaa tttgctattg ccgatatagt tgatagcgac tttatccaag tgattatgaa
     3541 attaagcggg cattgattta tgattacgcg ttgttttaaa gttgtcatta ttgtttttat
     3601 aatggtaatg acaacttctt gtaatccttg cttttttgca acttcgtctt gtaattatcc
     3661 ttttgatgat atgacgataa gagcaaacaa cgatattgaa tattttgtta aaaataatac
     3721 gactaacgaa caacgaattg atgatttcag aagttgcctt tccgttgctt gtcctgaaat
     3781 atataaatta tatcaattac ctgatgaaaa gggtaattat caatatatta taaaaaaata
     3841 ttatgataat aaatacaatg ataatgcagt caaatcgaca aattgtattg gggataatgc
     3901 aagatgtatg cttaataata aaggatattc aacaaaatgg taataatggg ttacggcttt
     3961 gaggaatggc tgcccgacct gcccgcccct gtttcagacg gcatcggcct gccgatgagc
     4021 cggttattga aagcccggtc gctgaccgcc gcattgcgcg ccttgccgca tacattttcg
     4081 gtggaactgc tgaaactggg cgaattggag acggaatgcg gagggaggct ggtgcgcgaa
     4141 gttttgttga agctggacgg tatccctgtt gtcgcggcaa ggagcgagtg ccgtatcggt
     4201 tcggcgtttt ggcaaaacat tttggactgc ggcacgcgtc ctttgggcga gcgtctgttt
     4261 caagccgatt tggaaggggc gcgttcggcg tttgagtttg ccgtttccgg cgaaggatgc
     4321 ggacggtact ttgccgcgcg gcgttctcgg ttttcccgtc acggcgagga aatgctgctg
     4381 accgagtatt ttctgcccga actgaaacgc tttatcggat aaaataccgt tttttcaagc
     4441 tgtgcggcaa tatgaatcct aaatcccctt tatttttacg actgtccgat cgtttggatg
     4501 tgtacctgcg cctgatgcgg gcggacaagc ccattgggac gctgcttttg ctgtggccga
     4561 cctactgggc attgtggctg gcttcagacg gcattcccga tttggcggta ttggcggcgt
     4621 ttacaatcgg cacgttttta atgcggagtg ccggttgcgt catcaacgat tttgccgacc
     4681 gcgattttga cggtgctgtc gagcgcacca aaaaccgtcc gttcgcacag ggtcgggtcg
     4741 gaaaaaaaga agcgctgctg ctgacggcat ttttgtgcct gcttgccgca ttgtgcctga
     4801 ttccgctgaa tcatctgaca tggctgatga gcctgcccgc gctgtttctt gcgctgactt
     4861 acccgtttac caaacgcttt tttccgattc cccaactcta tctcgggctt gccttttcct
     4921 tcggtatccc gatggcgttt gccgccgttg ccggaaacgt gccgcctcaa gcgtggatac
     4981 tctttgccgc caatgtgtta tggactctgg cgtatgacac ggtttatgca atggcggaca
     5041 aagaagacga tttgaaaatc ggcatcaaaa cctccgccgt cacgttcggg cgttacgaca
     5101 tcgccgccgt tatgctgtgt catggcggct ttaccctgct gatggcagta ttgggtgcgg
     5161 ttatcggtgc ggcatgggca tattggacgg caatccccat cgtcctgctg ctgcaatacc
     5221 gccaatatgc cgccatcaaa agccgcgtcc ggcaaatctg ttttgaaacg tttttggcaa
     5281 acaacagaat tggttgggtg tggtttaccg ccatttttgc ccatacgttt ttcgcgaaat
     5341 aaggcagggc aatgccgtct gaagagccgt aaactgcttt ggacggcatt tctatctgtg
     5401 ccgaaaagcg ttaaaatatg tttttaaaac gctgtgttat gtcagcccgt accgtatgcg
     5461 ggattgagat ttgccctagc agtcggtaca atctttctgt tttgcgatgt ctgaaaagag
     5521 aagcttatga gccttatcgg cgaaattttg cctttgtccc atattgtttt ggatatggag
     5581 gtgggcagta aaaaaaggct gtttgaggaa gcgggcctgc ttttggaacg cgaatcctca
     5641 ttgtcccatg ctgatgtttt cgaatgtctt tttgcccgtg aaaaactcgg ttcgaccggt
     5701 ttggggcagg gcgttgccat cccgcacggc cgtcatgccg gcgtgaagca ggcgacgggc
     5761 gcgttcatcc gcacgcgcga acccgtcgga tttgacgcac cggacggcaa gccggtttcc
     5821 ctgattttta tcttgctggt gccggaaaac gcaactggcg aacatttgga agtcttatcc
     5881 aaactggccg gcaagttttc ccaaaaaagc atccgcgaat cgctgatgac ggtttcttct
     5941 gcggaagaag cccgcgccat tttgactgaa gaataatatg cccagtattt ccgtccgccg
     6001 actgtttgac gacaaccaat acaagttaca acttgcctgg gccgccggca attcgggtgc
     6061 ggacaaccgt atcggcgtag aggcggacaa gcccgtcctc gctttggtcg gacacctgaa
     6121 tttcatccac cccaaccaaa tccaagtggt cggtttggcg gaatcggaat atctgaaccg
     6181 tctcgaatcg ggggaaacgg gttatcagtt cggcgacctg ttcgacattt ctatgtcttt
     6241 ggttattgtg gcaaacggct tgccggtttc cccggggctg cgcgactatt gccataaaaa
     6301 cgatattcca ctgctgactt ccaaactcga aagcccctat ctgatggacg tgttgcggat
     6361 ttacctgcaa cgcaccctgg cggcatcgtc cgtcaaacac ggcgtatttc tcgatgtgtt
     6421 tgaaatcggc gtgctgatta ccggacattc cggcttgggc aagagcgaat tggcgttgga
     6481 actgatttcg cgcggccaca gcctgattgc cgacgatgcg gtcgagctgt tccgcatcgg
     6541 tccggaaaca ttggaagggc gttgttcgcc tatgctgcgt gattttttgg aagtgcgcgg
     6601 cttggggata ctcaatatcc gccatatttt cggcgaaact tccatccgcc ccaaaaaaat
     6661 cctgcaactc attatcaatt tggtcgaggc agacgacgag tatatgaagc agctcgaccg
     6721 gttgagtatc cgcaccgaaa ccgaatccat cctcaacgtc aacgtccgtt cggttacgct
     6781 gcccgtcgcc gtcggacgca acctcgccgt tttggttgag gcggcggtac gcaattacat
     6841 tttgcagttg cgcggtaagg acagtacgcg cgaatttttg gaacgccatc agacgcaact
     6901 taaagaaaac gaacagaatc atgaaaatcg tcctgattag cgggttgtcc ggttcgggca
     6961 aatccgtcgc actgcgccaa atggaagatt cgggttattt ctgcgtggac aacctgccct
     7021 tggaaatgtt gcccgcgctg gtgtcgtatc atatcgagcg tgcggacgaa accgaattgg
     7081 cggtcagcgt cgatgtacgt tccggcattg acatcggaca ggcgcgggaa cagattgcct
     7141 ctctgcgcgg actggggcac agggttgaag ttttgtttgt cgaggcggaa gaaagcgtgt
     7201 tggtccgccg gttttccgaa accaggcgag gacatcctct gagcaatcag gatatgaccc
     7261 tgttggaaag cttaaagaaa gaacgggaat ggctgttccc gcttaaagaa atcgcctatt
     7321 gtatcgacac ttccaagatg aatgcccaac agctccgcca tgcagtccgg cagtggctga
     7381 aggtcgaacg taccgggctg ctggtgattt tggagtcctt cgggttcaaa tacggtgtgc
     7441 cgaacaacgc ggattttatg ttcgatatgc gcagtctgcc caacccgtat tacgatcccg
     7501 agttgaggcc ttacaccggt atggacaagc ccgtttggga ttatttggac ggacagccgc
     7561 ttgtgcagga aatggttgac gacatcgaaa ggtttgttac gcattggtta ccgcgtttgg
     7621 aggatgaaag caggagctac gttaccgtcg ccatcggttg cacgggagga cagcaccgtt
     7681 cggtctatat tgtcgaaaaa ctcgcccgaa ggttgaaagg gcgttatgaa ttgctgatac
     7741 ggcacagaca ggcgcaaaac ctgccgagcc gctaatcccg ttgaacgatg atgccgtctg
     7801 aaacccgatt ttctgtttca gacggcattt caaatattga gaagaaagga aagacatggc
     7861 aatccaatgg tttcccggcc atatgaacaa agcgaaaaaa gccatcgccg agcgcgccaa
     7921 aagcgtagac atggtgattg aaatgctgga tgcgcgaatg cccgcctcca gcgaaaaccc
     7981 cctgcttgcc cagctttcca aaggcaaacc caaacttaaa atcctaaaca aacaagatct
     8041 tgccgacccc gaacgcacaa aggtctggct tgaccactac aacagccgcc ccgacacgtg
     8101 cgccattgcc ctcgattcct ccgaaaccgg cgcacacggc aaaatcaccc aagcctgccg
     8161 cgcgatgatt ccccatcggc aaggcataga caaacccttg cgcgtcttga tttgcggcat
     8221 tcccaacgtc ggcaaatcca ccctcatcaa cggcatgata ggcaaaaaat ccgccaaaac
     8281 cggcaacgaa cccggcatca ccaaagccga acaacgcctt ttccttgccg acgacttctg
     8341 gctgtacgac acccccggaa tgctgtggcc gaaaatcatt gtcgaagaaa gcggctacaa
     8401 cctcgccgcc ggcggcgcag tcggacgcaa cgcattggac gaagaagaag tcgccctcga
     8461 acttttagac tacctccgcc gccactacct ccctatgttg caagaacgct accaagccga
     8521 caaagacccc agcagccact gggacgaaaa cgtttggctc gaatggatag ccaaaaaacg
     8581 cggcgcagtc ctcagcggcg gacggatcaa ctaccaaaaa gccgccgaaa acatcctcac
     8641 cgacttccgt gaaggcaaaa tcggcagaat caccctcgaa acgccgaacc aatgggaaac
     8701 ttggctcaaa aaagcccgtc agaaagaagc cgaactcaaa gccatacgcg aagccagaaa
     8761 agcagagcgt aaagggaaga agccttcgga agcataaaga atgccgtctg aaaaatattt
     8821 ttcaggcagc ttctctctac tccaaccgat ttcagacggc atatccaaac ccatgccgtt
     8881 tcagcacgga tacccgtatg accgacaaaa tttctcccga cgcgctgatt gaagccgcac
     8941 tgctgaccca aaccgaaccg ctgaccgaaa aatctatgcg cgaattgtgt gtgccgccac
     9001 tgtcgcagga caaactgatt gatgtgttgg cgcagttgaa aacgcgttgg caggataggg
     9061 cgttgcaact ggtgcatacg caagagggct ggcgttttca gattgttcag acggcattcg
     9121 agcggctggg cagcctgcaa gaacagcgtg cgccgcgcta ctcccgcgcc gtgatggaaa
     9181 cactggcgat tatcgcctac cagcagcccg taacgcgcgg cgacatcgaa ggcatacgcg
     9241 gtgtggcggt gtcgcagaac gtgatgcaga ccttgcagga tcgggggtgg attgaagtca
     9301 tcggacatcg ggacacattg ggaaaacccg cattgtgggc gacaacggca acttttctca
     9361 gcgatttgcg cttggacggt ctggaagaac ttccgccgct gaccgaactg ggcgaactgg
     9421 ttttacccga tttaatggaa atgccgccta cggatgaaga agagccggaa gccgtaccgt
     9481 ccgataccct gcccaactga aattccaaat gccgtctgaa acgcacattg cttcagacgg
     9541 catttcaaca aataagcaga taaaaacaag cactaagcaa aattaaggaa aaacttattt
     9601 ttaatttaaa aaatcttagt tataattcgt atatctaaag ttgatattgc ttttgtcggt
     9661 agaattgcta aggaatcctc acgatgcttc taacactttc tttgcgtgat tttgtcattg
     9721 tcgaaaatct gaatctggat tttcaaagcg gctttaccgt attgaccgga gaaactggcg
     9781 cgggcaagtc cattactttg gatgcgattg gtctgctgtt gggcgataaa gccgattaca
     9841 gccaagtccg cagcggcgca aaagaagcgc agttgtcggc gttgtttgat atttcccatt
     9901 tacctgtttt aaaagcagaa ttgtatgaac aggggctttt aaacgacgga gaagaagaac
     9961 tcagtatccg ccgcattatc gatgccaaag gcaaaagccg cagctttatc aacaatcagg
    10021 ccgctacctt ggcgcaactc aaagccgtcg gcagccagct tatcgacatc catgggcaaa
    10081 acgcccatca ttcgcttaat caggaagccg cccagcgcga attgttggac gcatttgcgg
    10141 gcagcagggc gcaggcggaa accgtcaggc agctttatca aaactgggca aactcaaaaa
    10201 aagcattgca ggaagcgcag gaacaggcag aaaacattgc actcgaacaa gagcgtctgg
    10261 aatggcagtt taacgaattg aatcagttgg acattaaaca aggcgaatgg gaagccctca
    10321 gccaaagcca cgacagcctt gcccattctg ccgagctgtt gcaggctgcc gaagaagtcg
    10381 gaagcaagat tgacggcgac aacggcatcc aacgccatat ctatcaatgt caaaaactat
    10441 tggccaatct gcaaaacatc gagccgcgct ttgccgagag cctgaatatg ttggcaagca
    10501 tcgaagccga attgggcgaa atcagtgcca atatgcgcga tgtggcaggt cgcagcgaca
    10561 tcaatcccaa cgaacttgcc gcacaagagc agcgtatggg cgagctgatg gggatggcgc
    10621 ggaaataccg gatcgagcct gaagagttgc ctgccaagtt ggcagaaatc gaagaacgcc
    10681 tgcaaagcct gcaagctgcc gccgatttgg acgcgctcga gcataatgtt gcccacaatt
    10741 ttgccgaata tcaggaagct gcccacatcc tttctgccat gcgccatcag gcggcagagc
    10801 gtttgagcgg cgaaacgacc gagcatatgc aacaccttgc catgaaaggt gcacgtttcg
    10861 acatcgtcct gttgccctcg tcgccgacgg cacacggttt ggagcaggtt caatttcaag
    10921 ttgccgccaa caaaggcaat ccgccccgtc cgctgaataa agttgcctcc ggcggcgaat
    10981 tggcgcgtat cagccttgcc ttacaggttg ttgccagcca atatacccaa gttcccaccc
    11041 tgatttttga tgaggtcgat accggtattg gagggggagt ggctgaaatg gtcggcaagg
    11101 cattacgtgc gttgggcaga aaacatcagg tgcttgccgt tacccatctt ccgcaagtcg
    11161 catcctgcgg cgaaaaccac tggcgagtgc gcaagcacag cgagggagag caaaccgtca
    11221 gcgaaatcag tatattggat gaaatccaac gggtcgaaga ggttgcccgt atgttgggcg
    11281 gagaagtcat taccgatacg acgcggcaac atgcggcaga attgctgcaa cttgcgtcga
    11341 aaaatagttt attttaaaat caatcagtta aaaaataact aaaaataaaa gtctaaaaca
    11401 atagacagaa ctcagataaa tccgtattat tacgctttct taatcacttg aacaagtgat
    11461 tgtgc
//
LOCUS       DAWKOX010000055        11405 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.055, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000055 DAWKOX010000000
VERSION     DAWKOX010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11405
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.055"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..79)
                     /locus_tag="WJK78_001025"
     CDS             complement(<1..79)
                     /locus_tag="WJK78_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ7597964.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="WJK78_001026"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="WJK78_001026"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ7597965.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(1695..3602)
                     /gene="dxs"
                     /locus_tag="WJK78_001027"
     CDS             complement(1695..3602)
                     /gene="dxs"
                     /locus_tag="WJK78_001027"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ7597966.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRTFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSENKPAAKPTYTQVF
                     GKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACE
                     GMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLR
                     CVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKGII
                     RREGGKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVTLE
                     ENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVERRV
                     RAWLSDRDAAN"
     gene            complement(3687..4604)
                     /gene="xerC"
                     /locus_tag="WJK78_001028"
     CDS             complement(3687..4604)
                     /gene="xerC"
                     /locus_tag="WJK78_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ7597967.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDEGGVPQDLSRRDFTAALRRLSQRGLNARTLARKLSSWRQYCVWLVERGLLHTDP
                     TADIKPPKQPERVPKALSQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLVGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4798..5862
                     /locus_tag="WJK78_001029"
     CDS             4798..5862
                     /locus_tag="WJK78_001029"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ7597968.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMASRYAKGELNQIVK"
     gene            5882..6841
                     /locus_tag="WJK78_001030"
     CDS             5882..6841
                     /locus_tag="WJK78_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding family protein"
                     /protein_id="HEZ7597969.1"
                     /translation="MPSEPLFGRHLIFASLTCLIDAVCKKRYHNQNVYILSILRMTRS
                     KPVNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTTPLDHKDKSLQSLTLD
                     QSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGQTITLASGE
                     FQIYKQNHSAVVALQIEKINNPDKIDSLINQRSFLVSGLGGEHTAFNQLPDGKAEYHG
                     KAFSSDDPNGRLHYSIDFTKKQGYGRIEHLKTPEQNVELASAELKADEKSHAVILGDT
                     RYGGEEKGTYHLALFGDRAQEIAGSATVKIREKVHEIGIAGKQ"
     gene            6980..7657
                     /gene="tsaB"
                     /locus_tag="WJK78_001031"
     CDS             6980..7657
                     /gene="tsaB"
                     /locus_tag="WJK78_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ7597970.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETLLFHQEAGSRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFNTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHSELLYVRNKIALTAKEQ
                     AERKART"
     gene            7654..8094
                     /gene="rimI"
                     /locus_tag="WJK78_001032"
     CDS             7654..8094
                     /gene="rimI"
                     /locus_tag="WJK78_001032"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ7597971.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGGIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWFAHLPEDTQRLLLE
                     VRAGNTAAQALYAAHGFTDAGRRKNYYRTADGKTEDAVLMEKIC"
     gene            8088..8825
                     /locus_tag="WJK78_001033"
     CDS             8088..8825
                     /locus_tag="WJK78_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ7597972.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFYGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8887..9528
                     /gene="pyrE"
                     /locus_tag="WJK78_001034"
     CDS             8887..9528
                     /gene="pyrE"
                     /locus_tag="WJK78_001034"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ7597973.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9602..10036
                     /locus_tag="WJK78_001035"
     CDS             9602..10036
                     /locus_tag="WJK78_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597974.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10033..11343
                     /gene="argA"
                     /locus_tag="WJK78_001036"
     CDS             10033..11343
                     /gene="argA"
                     /locus_tag="WJK78_001036"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ7597975.1"
                     /translation="MIVPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCATLKTFTEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
BASE COUNT         2576 a         3637 c         2960 g         2232 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccgaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatat agccgtcccg
      121 accgattaaa ttcatatttt aaaacaatat tctgtttaca aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgtgga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgccaaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctccttc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtg aaagaaatca acctcttggg acaaaacgtc aacgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgc atcgtccacg
      961 aaatccccgg cattgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt gtgcctgagc agcgatttca
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acatcgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgcc ggacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaacgat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccagct ccaagcccgc accgccaaca
     1501 accgcgtcgt caactttacc ggcacgcccg acatgattaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaagttgt cgaagcctaa acccttacgc
     1621 cgaaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgatgg
     1681 cgcggccagg cggcttaatt tgccgcatcc cgatccgaca accacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa gcccaaatcg tctaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacgaagcgc
     1981 atatcggcga cggtggcgtt cagtttttcg gcaaccgcca atgcgggggc gaccatactg
     2041 ccgaaggcaa tgaaggcggt tttcccacct tcgcggcgga taatgccctt gccgatttcc
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg catccgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat gttcggcacg cagcgcaaaa agctcaaatc gtacagaccg
     2281 gcgtgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggt
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catcccttcg caagccaaac cgccggcaaa ggttacggcg
     2461 tgctgctcgg caatgccgac gtcgaaatag cggtcgggga atcgttgttc aaactcaacc
     2521 aagccgctgc cctcgcgcat ggcgggggta atcgcaacca gtcgggaatc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcggc aggtttgttt
     2641 tcagacggca tttgcgccgc gctttctttg ggcaggttgg cgacggcgtg gtatttgacg
     2701 gggtcgtttt cggcgagttt gtagccgttg ccctttttgg tgatgacgtg cagcagttga
     2761 gggcctttgc ggctgcgcaa gtctttcaat acatcgacca gattttcgac gttgtgtccg
     2821 tccacggggc cggtatagcg gaagccgaag ttttcaaaca aagacagtga ctgtttggcg
     2881 tgttcggctt cttcggcaag ggttttgatt ttgtgttcga ctttttgggc aaactccatc
     2941 gcgccgggta ttttgtctaa taccttgccc gtttgcgctt tgacggtact caacaggccg
     3001 tgcatatcgc gcacgacgtt gctggcaagg tatttcggca gcgcgccgac gttgggggaa
     3061 atcgacattt cgttgtcgtt gaggacgacc agcaaatcca catccatatc gcctgcgcaa
     3121 ttcaaggctt caaacgcctg ccccgccgtc atcgcgccgt cgccgatgat ggcgacgctg
     3181 cggcggtcgc tgcccaagag tttgtctgcc gccgccatgc ccaacgccgc gccgatggag
     3241 gtggaggaat gccccacgcc gaacgcgtcg tactcggact cgcaacgttt cggaaaaccc
     3301 gccaaaccgc catattggcg catggtgtgc atctggtttt tcctgcctgt caggattttg
     3361 tgcggatagc tttggtgtcc gacatcccac accagcttgt cttcgggcgt gtcgtacaca
     3421 tagtgcaggg cgatggtcag ttcgaccgcg cccaaattgc tggcgaaatg cccgccggtc
     3481 tgcccgacag attccagcag aaaggtgcgc aactcgccgg caaggcgcgg cagctgtttt
     3541 ttgtccagac ggcgcaaatc ttgcgggctg tcaatcaggt cgagtagggg gcttgggttc
     3601 atggtgtgtc ttttttatgt gtcgtccagg tgcaacgacc aattatatat caagagcgtg
     3661 cggctgacgg ctgattttgc cgtatgtcat tcgtcctgcc gcttggcgcg cgggtgggct
     3721 tcgtcataca ggcgggcgat gtggtcgaaa tcgagtttgg tgtaaatctg cgtggtcgaa
     3781 aggctgctgt gcccgagcag ctcctgcacc gcccggatgt cgcgcgaagc ctgcaacagg
     3841 tgtccggcgt agctgtggcg catcatatgc ggcgaaacgt gcctgccgtc gccgttttgc
     3901 gccgcccatt gcgccaaacg tttttggatt tggcgttggc tcaggcgcgt gccgttcctg
     3961 ccggtaaaca gggctttgcc gtccgatgcc gtctgacgca gcggcagata gtttttcagg
     4021 gcttccacgc ttttgccgac cagcggcacc tgccgctgct tgcgcccttt gccggtaacg
     4081 tgtacccacg cctcgtccaa atagacatca tctgcattca agccgtgtat ctcgctcacg
     4141 cgcaaaccgc tgccgtacat cagctcgaac agggcgtgat cgcgcaccgc cagcgggtcg
     4201 ccgccgtcca cgggcaaatc cagcatccgg ttcagccatt cctgcgacag ggctttgggt
     4261 acgcgctcgg gctgcttcgg cggtttgatg tcggcggtcg ggtcggtatg cagcagaccg
     4321 cgttccacca gccaaacaca atactgccgc caagacgaca gcttgcgcgc cagcgtccgc
     4381 gcattcaaac cgcgctgcga cagccgccgc aacgccgccg taaaatcgcg ccgcgacaag
     4441 tcctgcggca cgccgccttc atcttcagac ggcatttgtg ccaacagcgc aaacagttct
     4501 tccaaatcgc gccggtatgc cgccaccgtg tgctccgact tgccctcgcg cacgatgttt
     4561 tccaaataag cgtcaaaatg cgccgcaaac ccgtccaaaa ccataaccgc cccacacaaa
     4621 tatcaaaaaa acagtgaaaa cattatcata aacgacacac caaaaccccg aaccgcccaa
     4681 aatccgaccc gtccgcccgc cgttatcgtt aacataaaat caatgagccg tttatggttt
     4741 tttgccgcaa aaaacattat aatccgcctt atttacctat tgcccaagga gacacaaatg
     4801 gcactcgtat ccatgcgcca actgcttgat catgctgccg aaaacagcta cggcctgccc
     4861 gcgttcaacg tcaacaacct cgaacaaatg cgcgccatta tggaagccgc cgaccaagtc
     4921 aacgcgcccg tcatcgtaca ggcgagtgca ggtgcgcgca aatatgcggg cgcgccgttt
     4981 ttgcgccacc tgattctggc ggctgtcgaa gaatttccgc acatccccgt cgtgatgcac
     5041 caagaccacg gcgcatcgcc cgacgtgtgc caacgctcca tccaactggg cttttcctcc
     5101 gtgatgatgg acggctcgct gatggaagac ggcaaaaccc cttcttctta tgaatacaac
     5161 gtcaacgcca cccgtaccgt ggttaatttc tcccacgctt gcggcgtatc cgtcgaaggc
     5221 gaaatcggcg tgttgggcaa cctcgaaacc ggcgaagccg gcgaagaaga cggtgtaggc
     5281 gcagtgggca aactttccca cgaccaaatg ctcaccagcg tcgaagatgc cgtgcgtttc
     5341 gttaaagata ccggcgttga cgcattggcg attgccgtcg gcaccagcca cggcgcgtac
     5401 aaattcaccc gtccgcccac aggcgacgtg ttgcgtatcg accgcatcaa agaaatccac
     5461 caagccctgc ccaatacaca catcgtgatg cacggctcca gctccgttcc gcaagaatgg
     5521 ctgaaagtca tcaacgaata cggcggcaat atcggcgaaa cctacggcgt gccggttgaa
     5581 gaaatcgtcg aaggcatcaa acacggcgtg cgcaaagtca acatcgacac cgacttgcgc
     5641 cttgcttcca ccggcgcggt acgccgctac cttgccgaaa acccgtccga cttcgatccg
     5701 cgcaaatacc tgagcaaaac cattgaagcg atgaagcaaa tctgcctcga ccgctatctt
     5761 gcgttcggtt gcgaaggtca ggcaggcaaa atcaaaccgg tttccttgga aaaaatggca
     5821 agccgttatg ccaagggcga attgaaccaa atcgtcaaat aacaggttgc ttgtaaacaa
     5881 aatgccgtct gaaccgttgt tcggacggca tttgattttt gcttctttga cctgcctcat
     5941 tgatgcagta tgcaaaaaaa gataccataa ccaaaatgtt tatatattat ctattctgcg
     6001 tatgactagg agcaaacctg tgaaccgaac tgccttctgc tgcctttctt tgaccgccgc
     6061 cctgattctg accgcctgca gcagcggagg cggcggtgtc gccgccgaca tcggcgcggg
     6121 gcttgccgat gcactaacca caccgctcga ccataaagac aaaagtttgc agtctttgac
     6181 gctggatcag tccgtcagga aaaacgagaa actgaagctg gcggcacaag gtgcggaaaa
     6241 aacttatgga aacggcgaca gcctcaatac gggcaaattg aagaacgaca aggtcagccg
     6301 cttcgacttt atccgtcaaa tcgaagtgga cggacaaacc atcacgctgg caagcggcga
     6361 atttcaaata tacaaacaga accactccgc cgtcgttgcc ctacagattg aaaaaatcaa
     6421 caaccccgac aaaatcgaca gcctgataaa ccaacgctcc ttccttgtca gcggtttggg
     6481 cggagaacat accgccttca accaactgcc tgacggcaaa gccgagtatc acggcaaagc
     6541 attcagctcc gacgacccga acggcaggct gcactactcc attgatttta ccaaaaaaca
     6601 gggttacggc agaatcgaac acctgaaaac gcccgagcag aatgtcgagc ttgcctccgc
     6661 cgaactcaaa gcagatgaaa aatcacacgc cgtcattttg ggcgacacgc gctacggcgg
     6721 cgaagaaaaa ggcacttacc acctcgccct tttcggcgac cgcgcccaag aaatcgccgg
     6781 ctcggcaacc gtgaagataa gggaaaaggt tcacgaaatc ggcatcgccg gcaaacagta
     6841 gcatttgaaa aatgccgtcc gaacacgata gtttaccgtt cggacggcat ttttgcgcca
     6901 tactgcccta ggacacgacg gcacggcagg caagccggtt tcactatata atgccgtctg
     6961 aaccaacgag aaccacacca tgcaagccga tttcaaccgc cccgtcctcg ccgtcgatac
     7021 cggaacttcc tatttgtcgc tcgcgctgcg cgccgacggc gaaaccctcc tgttccatca
     7081 ggaggccggc agccgccagt ccgaactgat cctgccggaa atccgcaccc tattccgaaa
     7141 tgcgggcatt accgccgccg atttgggggc gattgtttat gcgaaaggtc ccggcgcgtt
     7201 taccggactg cgtatcggca tcggcgtggc gcaaggtttg gcaacgccat tcaatacgcc
     7261 tttaatcggc atccccacgc tcgatgccgc cgcctcgctg ccgccgccgc aaagctgcat
     7321 actcgccgct gcggacgcgc gtatgggcga agtgttttat gcgtggttcg acacgctgaa
     7381 ccgccgccgt ttgagcgatt atcaggtcgg gcgggcggca gacatccggc tgccggaggg
     7441 atgtgccttt tcagacggca taggcagcgc gttcgcgttg gaagaaacgc cgccgttttc
     7501 aggcaaaccc gatatgccga ccgccgccga cttcctcaat ctggcggcgg aaggcggttt
     7561 tcccgccgtc gctgctgcac actccgaact gctctacgtc cgcaacaaaa tcgccctaac
     7621 cgccaaagaa caggcggaac ggaaagcccg aacatgaaca tccgccgcgc ctcaccgtcc
     7681 gactgcgccg cactcgccgc gctcgatgcc gtctgcaacc cgtccgcgtg gacgcaacgc
     7741 caatttgagt ccgcattggt ttcgccgtcc gaacaggttt tcctcgcgga aaaagacggc
     7801 gggattgccg cctttatcgt ttggcagaac ctgcccgacg aatccgaact gcacctgatt
     7861 gccaccgcgc ccgaatgccg ccgccgtggc gttgcgtccg ccctgctcga atattggttc
     7921 gcacatctgc ccgaagacac gcaacgcctg ctgctcgaag tccgtgcagg caacaccgcc
     7981 gcacaggcac tgtacgcggc gcacggcttt accgatgcgg gcaggcggaa aaactattac
     8041 cgtacagccg acggtaaaac cgaagatgct gtcttaatgg agaaaatatg ttaagcgcgc
     8101 gctacctcca cctgcacgaa gctttgggtt taggcccgat gtggctgaaa caggccgccg
     8161 ccgtcctgcc gcccaaaaac acacccgcaa ccccggcaca ggcacgtcct caaaccgtcc
     8221 gcgccgcccc gatccgccct tcccaacccc ataacggtca ggcgcggctc gaaacgatga
     8281 aagcgttgga aaccgccgcc gtacatacgc gcaaacccgc gcctgaaacc gaaacgcccc
     8341 cgcccggcct ttcagacggc atcgcccccg ttcccgccgc ttcgggcata accaaacttg
     8401 ccgtcgtcag cctttgccca ccgattgagg atgcggttta cgggcaactg ttctacggca
     8461 aagcgggtgt tctgcttgac aacatactca aagccgtagg actggatgcc gcctatgtcc
     8521 acaaaacctg ttgggtgaaa accgccgccg tcggcaaccc gatgccgtct gaagcggcaa
     8581 tcgaaaccgc gacggtttcc gtcatgcagg aactcgacgg ctgccgcgcc cccgccgtcc
     8641 tattcctcgg acaggctttt gtccagcctg aacggcaaac gatgattgaa actttgtgcg
     8701 gcagccgtcc cttcttcatc atcgaccatc ccgcccggct gttgcgccaa cccgaactta
     8761 aagcccgcgc ctggcaggtg ttgaaacagt tgaaacgcgc cttgcggcaa ggcggcggca
     8821 gttgaagcgc accgcacggg gcggtagaat cgcaactgcg tcccaatatc tgacagaaag
     8881 cacaaaatga ccgatttccg ccaagatttc ctcaaattct ccctcgccca aaatgttttg
     8941 aaattcggcg aatttaccac caaagccgga cggcggtcgc cctatttctt caatgccggc
     9001 ctctttaacg acggcttgtc cacgctgcaa ctggcaaaat tttacgcaca atccatcatt
     9061 gaaagcggca tccgattcga tatgctgttc ggccccgcct acaaaggcat tattttggcg
     9121 gcggcaaccg cgatgatgct ggcggaaaaa ggcgtgaacg tcccgtttgc ctacaaccgc
     9181 aaagaagcca aagaccacgg cgaaggcggc gtgttggtcg gtgcgccgct taaaggccgc
     9241 gtgctgatta tcgacgacgt gatttccgcc ggcacatccg tacgcgaatc gatcaagctg
     9301 attgaagcgg agggcgcaac ccccgccggt gtcgccatcg cgctcgatcg catggaaaaa
     9361 ggcacgggtg agttgagcgc ggttcaggaa gtggaaaaac aatacggtct gcccgtcgcc
     9421 cccatcgcca gcctgaacga tttgtttatt ctgttgcaaa acaaccccga attcggacag
     9481 ttcctcgaac ccgtccgagc ctaccgtcgg cagtacggcg tagaataaaa acaaagcata
     9541 tgccgtccga accgccttac gcctcagacg gcatcaaacc tgacacacac gaggaaatac
     9601 catgcccgcc tgtttctgcc cccactgcaa aacccgtctc tgggtcaaag aaacccaact
     9661 caatgtcgcc caaggcttcg tcgtctgcca aaaatgcgaa ggactgttta aagccaaaga
     9721 ccatctggca agcacgaaag aacccatatt caacgatttg cccgaggctg tttcggatgt
     9781 caaactcgtt caccgtatcg gcacgcgcgc catcggcaag aaacagattt cccgtgacga
     9841 aatcgccggc atcctcaacg gcggcacaac ccagcccgat attccgcccg caaccgccgc
     9901 cacccctgct gccgcaccgc aggttaccgt accgcccgcc gcgcccgccc gtcaggatgg
     9961 gttcaactgg acgattgcaa ccctgtttgc ccttatcgtc ctcattatgc agctttccta
    10021 cctcgtcatc ctatgatcgt gcccgacctc tttgtcgccc acttccgcga agccgccccc
    10081 tacatccgcc aaatgcgcgg caaaacgctg gtcgccggca tagacgaccg cctgctcgaa
    10141 ggtgatacct taaacaagct cgccgccgac atcgggcttt tgtcgcaact gggcatcagg
    10201 ctcgtcctca tccacggcgc gcgccacttc ctcgaccgcc acgccgccgc gcaaggccgc
    10261 acgccgcatt attgccgggg cttgcgcgtt accgacgaaa cctcgctcga acaggcgcag
    10321 cagtttgccg gcaccgtccg cagccgtttt gaagccgcat tgtgcggcag cgtttccggg
    10381 ttcgcgcgcg cgccttccgt cccgctcgta tcgggcaact tcctgaccgc ccgtccgata
    10441 ggtgtgattg acggaaccga tatggaatac gcgggcgtta tccgcaaaac cgacaccgcc
    10501 gccctccgtt tccaactcga cgcgggcaat atcgtctggc tgccgccgct cggacattcc
    10561 tacagcggca agaccttcca tctcgatatg cttcaaaccg ccgcctccgt cgccgtctcg
    10621 cttcaggccg aaaaactcgt ttacctgacc ctttcagacg gcatttcccg ccccgacggc
    10681 acgctcgccg taaccctctc ggcacaggaa gcgcaatcgc tggcggaaca cgccggcggc
    10741 gaaacgcgac ggctgatttc gtccgccgtt gccgcgctcg aaggcggcgt gcatcgcgtc
    10801 caaatcctca acggtgccgc cgacggcagc ctgctgcaag aactcttcac tcgcaacggc
    10861 atcggcacgt ccattgccaa agaagccttc gtctccatcc ggcaggcgca cagcggcgac
    10921 atcccgcaca ttgccgccct catccgcccg ctggaagaac aaggcatcct gctgcaccgc
    10981 agccgcgaat acctcgaaaa ccacatttcc gaattttcca tcctcgaaca cgacggcaac
    11041 ctgtacggtt gcgccaccct aaaaaccttt accgaagccg attgcggcga aatcgcctgc
    11101 cttgccgtct cgccgcaggc acaggacggc ggctacggcg aacgcctgct tgcccacatt
    11161 atcgataagg cgcgcggcat aggcataagc aggctgttcg cactgtccac aaataccggc
    11221 gaatggtttg ccgaacgcgg ctttcagacg gcatcggaag acgagttgcc cgaaacgcgg
    11281 cgcaaagact accgcagcaa cggacggaac tcgcatattc tggtgcgtcg cctgcaccgc
    11341 tgaccgcaac ggaaagccgc cgcagaaatg ccgtctgaac cccgtttcag acggcatttc
    11401 cccga
//
LOCUS       DAWKOX010000056        11297 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.056, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000056 DAWKOX010000000
VERSION     DAWKOX010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11297
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.056"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(81..1127)
                     /gene="recA"
                     /locus_tag="WJK78_001037"
     CDS             complement(81..1127)
                     /gene="recA"
                     /locus_tag="WJK78_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ7597976.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            1381..2145
                     /locus_tag="WJK78_001038"
     CDS             1381..2145
                     /locus_tag="WJK78_001038"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ7597977.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAVLSAVLDQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRCAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            2165..4180
                     /gene="rep"
                     /locus_tag="WJK78_001039"
     CDS             2165..4180
                     /gene="rep"
                     /locus_tag="WJK78_001039"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ7597978.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQ
                     QTARLYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQFGEGDPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINNLLKEIDYENHLLASEESKAGEIKWRNVGDL
                     VSWFARKGGEDGKNVIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDNLKKSGAAD"
     gene            complement(4248..5306)
                     /gene="dinB"
                     /locus_tag="WJK78_001040"
     CDS             complement(4248..5306)
                     /gene="dinB"
                     /locus_tag="WJK78_001040"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ7597979.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYDSEVAKEIRAAIFAETGLTASAGIASNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMQTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCASLLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
     gene            complement(5450..6643)
                     /locus_tag="WJK78_001041"
     CDS             complement(5450..6643)
                     /locus_tag="WJK78_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7597980.1"
                     /translation="MYYYDEYSGSRTPVYVDVYELDEKGNKIQETNPDGSPVFTGFSG
                     TVPVWKTVKVADDHVPALYNYAKYLNTNKTHSLTASTRFNVTGRLHLLGGLHYTRYET
                     SQTKDMPVRYGQPASDFQTASSIKADQDHYTAKMQGHKLTPYAGITYDLTPQQSIYGS
                     YTKIFKQQDNVDVSAKTVLPPLVGTNYEVGWKGAFLQGRLNASFALFYLEQKNRTVVD
                     FGYVPGAGGKQGSFQTVAKPIGKVVSRGAEAELSGELNEDWKVFAGYTYNKSRYKNAA
                     EVNAERLAKNTGADPYNFSNFTPVHIFRFGTSFHIPNTGLTVGGGVSAQSGTSSLYNI
                     RQGGYGLIDGFVRYELGKHAKLSLIGTNLNGRTYFENNYNRTRGANNFYGEPRTVSMK
                     LDWQF"
     gene            complement(6679..8538)
                     /locus_tag="WJK78_001042"
     CDS             complement(6679..8538)
                     /locus_tag="WJK78_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ7597981.1"
                     /translation="MNQNHFSLKILTVMLLSAYGGSFADGVVPVSDGNTVSLDTVNVR
                     GSHALSGKTEKTRSYTIDRMSTATGMRIAGKDTPQSVSVITRSRLDDKAVHTLEEAMK
                     NTTGVNVVRDSGLQTRFLSRGFYIDQIGEDGITVNVAGRSGYTAKIDVSPSTDLAVYD
                     HIEVVRGATGLTQSNSEPGGTVNLIRKRPTASFKHTGELTADHRGSRRAVLDVSGSLN
                     KANTLRGRLVGAEEYKKSFKDRVWGRKHMVYGIAEADAGDSSVLTLGGMYQKSREVPD
                     FSGIILSCENQKTAPFSSTPACNRPLQLPRNTYLGEDWSRLSADKYNLFSGFKHVFDN
                     GWQLNAEVSYTKNESDAKVGQFFLKNEHAAGLSDEDAVGFLTEKNEVIPFEPKDKALE
                     KLKAYRDETAKEYRERKDDFVKNRFDNTAFEQYRSRRAAERKAGFDECMSAPFALDFI
                     CQGSWGDPGVDADKSEFVDKALAKEGIFNNAAQRFPNSLYDSSFNRKATANRRYSYMP
                     LRHTKDDRQWGIKLDLTGTYGLFGREHDFFVGYAYGDEKIRSEYLEIYERRHRVRPNT
                     GATHGVYAGSCQGSRTVICLLLWSGGIKNPIGRRTMKKATVPFMPKNAGMPRK"
     gene            8812..9591
                     /locus_tag="WJK78_001043"
     CDS             8812..9591
                     /locus_tag="WJK78_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ7597982.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYRHSFHFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(9796..11208)
                     /locus_tag="WJK78_001044"
     CDS             complement(9796..11208)
                     /locus_tag="WJK78_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ7597983.1"
                     /translation="MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLVAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEEWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDGMGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKAPFDWCNTEEVRFFP
                     ALGRLHAHKVKAELVRHYGVDCYVSAKNLLKTFTTVRFEKGSDGILNAKTADLKNGVT
                     DNPPTGLFANKKAARRALSSWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACG
                     RSDEQVLAFAHKLPVLDWGKMHEVEITETDPLTGEKVVLHGMGGALEMDDGLWYFDKD
                     LPDAFKAKFKTDRKNIKEIG"
BASE COUNT         2743 a         3167 c         2739 g         2648 t
ORIGIN      
        1 aaactcaaat caagccgttc ggaggcagct caaaaaacgg tacttcgcag caggagtacc
       61 gtttatcggg atttcaagtt ttactcttcg ggacgctcgc cgtcggtttc gtcctgcgtc
      121 ccttcggtga tgtgcatttc tacgccgttg agggcgcgga tttttgcgtc gatttcgtcg
      181 gcaatttcgg ggttttcttt cagccagacg cggacgttgt ctttgccctg accgattttc
      241 gcgccgttgt agctgtacca cgcgccggat ttgttgataa tgtcgttttt cacgccgatg
      301 tcgatcaatt cgccttccca actgatgcct tctccgtaga ggatgtcaaa ctctgcctga
      361 cggaacgggg gggcgacttt gtttttgatg actttgacgc gggtttcgtt gcccaatacc
      421 tcttcgcctt ttttgatgga tccggtgcgg cggatgtcga ggcggacgga agaatagaat
      481 ttcagcgcgt tgccgccggt ggtggtttcg gggctgccga acattacgcc gatcttcatc
      541 cggatttggt tgatgaacac aaccagcgtg ttggtttttt tgatgtgtcc ggtcagttta
      601 cgcaaagcct gactcatcag gcgcgcctgc agtccgacat ggctgtcccc catatcgcct
      661 tcgatttcgg ctttggggac gagtgcggct acggaatcga cgactaccat atctatgccg
      721 cctgaacgga cgagtgtgtc gcagatttcc aaagcctgtt cgccggtatc gggctgggag
      781 aggtaaagct cttcgacttt tacgccgagt ttgcgggcgt aaacgggatc gaaggcgtgt
      841 tcggcatcga caaaggcgca cacgccgccg tttttctggc attgggcgac ggcttcgagg
      901 cagagggtgg ttttgccgga ggattcgggg ccgaagattt cgacgatgcg cccgcgcggc
      961 agaccgccga ctccgagggc gaggtctaat ccgagcgatc cggtggaaat gacttcgagg
     1021 ttttcttcct gctggctgcc gtccattttc atgatggcac ctttgccgaa acttttttcg
     1081 atttgcgcca gtgcggcggc aagggctttg cttttgtcgt ctgacattgg ggttactccg
     1141 gaacaaatgc ggtatgtggg atgcggcgca acacgggctg cggcgcggga tgtgtatcgt
     1201 tttcccgatg tgcgggctat cggtaatgct gcttcacggg gttgccatta tcgcatattt
     1261 ccttgcttgc cgatatgcgg caggacgcgg cggcttgtgc cggaatggaa tctggatgcc
     1321 gtctaaaagg cggccggctt tgttataatg gcggctgttt tttctgtgtg tgcctgtttt
     1381 atgtgttcct gccttgttgt caaaaatacc gttatcggaa gcggacgcac caaaatcgcc
     1441 gtgccgcttg tcgcccgcga tgccgccgta ctttccgccg tacttgacca aatcaaaaac
     1501 ctgcccttcg atatcgtcga gttccgcgcc gattttttgg aatgcgcggg cagcatcggc
     1561 gaagtattgc gccacacgca gaccgtccgc gacgcgctgc ccgacaaacc gctgctgttt
     1621 acgttcagac ggcatggcga aggcggctca ttcccgtgtt cggacgatta ttattttgaa
     1681 ctgctcgacg cgctgatcga aagccgcctg cccgacatta tcgatattga gctgttttcc
     1741 ggcgaaaccg ccgtccggtg cgccgtggca aatgctcaaa aaaacggcat cgccgccctg
     1801 ctctgcaatc atgagtttca ccgcacgccg ccgcaagaag aaatcgtatg ccgtctgaaa
     1861 cagatggagg actgcggcgc ggacatctgc aaaattgcgg tgatgccgca aagcgcggaa
     1921 gatgtgctga ctttgctttc cgccacgctc aaagcgaaag agcttgccgc caaaccgatt
     1981 gttacgatgt cgatggggca gacgggggcg gtcagccggc ttgccggaca ggtgttcggc
     2041 tcaagcatca cgttcggttc gggaacgcaa aactccgcgc cggggcaaat cggcgtatcc
     2101 gccctccgtg cgacactcga ctgcctcgaa aacggcgcag actgatttca gacagcatca
     2161 aaacatgatg aaactcaatc cccaacagct cgaagccgtc cgctacctcg gcggcccact
     2221 gctcgtcctt gccggtgcag gcagcggcaa aaccggcgtg attactcaaa aaattaagca
     2281 tttgattgtc aatgtcggct acctgccgca taccgttgcc gcaattacct ttaccaacaa
     2341 agccgccgcg gaaatgcagg agcgcgtcgc caaaatgctg cccaaaccgc aaacgcgcgg
     2401 gctgacgatt tgcacgttcc actctttggg catgaagatt ctgcgcgaag aggcgaacca
     2461 tatcggttac aaaaaaaact tctccattct cgattctacc gacagcgcga aaatcatcgg
     2521 cgaactctta ggcggtacgg gcaaagaagc cgtattcaag gcgcaacatc aaatttccct
     2581 ttggaaaaac gatttaaaaa cgcctgaaga tgtcgttcag acggcctcta atgcgtggga
     2641 acaacaaacc gcacgcctgt atgcgagcta tcaggaaacc ttacaaagct atcaggcagt
     2701 ggacttcgac gacttaatcc gcctgcctgc cgtgctgttg cagcaaaaca gcgaagtgcg
     2761 caacaaatgg cagcggcggc tgcgttatct gctggttgac gaatgccaag atacgaatac
     2821 ctgccaattt acgttgatga aacttctgac cggcgcggaa ggtatgttta ccgccgtcgg
     2881 cgacgacgac cagtccatct acgcatggcg cggcgcaaac atggaaaacc tgcgcaaaat
     2941 gcaggaaaac tatccgcaga tgaaggtcat taaactggag caaaactacc gctccactgc
     3001 gcggattctc aaaatcgcca acaaagtcat tgaaaacaat ccaaaattgt tcaccaaaaa
     3061 actttggtcg cagttcggcg aaggcgatcc cgtcaaagtc gttgcctgcc aaaacgagca
     3121 gcacgaagcc gactgggtcg tcagccaaat cgtcaaacaa aaactcatcg gcggcgacaa
     3181 aacccaatac gccgatttcg ccgtgttata ccgcggaaag catcaggcga ggattttcga
     3241 ggaagcattg cgcggcgcgc gcatccccta ccgtctctcc ggcggacaaa gctttttcga
     3301 taaagccgaa atcaaagacg tgttgtctta tgtgcggctg cttgccaacc ccaacgacga
     3361 tcccgccttt ctgcgtgccg ttaccacgcc caaacgcggc atcggcgatg tcacgctggg
     3421 caagctcaac acttacgcgc acgaacacga atgcagcctg tatgaagccg cacaaaacga
     3481 agaagccctt gccacgctga acaataccaa ccgccaacac ctgcaagcct ttatggatat
     3541 gttcggcagc taccgcgcca aagcggaaac cggcgaagca ggcgagttca tcaacaacct
     3601 gcttaaagaa atcgactacg aaaaccatct gcttgccagt gaagaaagca aagcaggcga
     3661 aatcaaatgg cgcaacgtcg gcgatttggt atcatggttt gcgcgaaaag gcggggaaga
     3721 cggcaaaaac gtcatcgaac tcgcccaaac cgtcgccttg atgacgcttt tggaaggaaa
     3781 agacgaagaa gaaaccgatg ctgtctcgct atccacgcta cacgccgcca aaggtttgga
     3841 gtatccgtat gttttccttg tcggttgcga agaaggtgtt ttgccgcaca acgacagcat
     3901 cgaagagggc aacgtcgaag aagaacgccg cctgatgtac gtcggcatca cccgcgccaa
     3961 acgccagctt acgctgaccc actgcgtcaa acgcaaaaaa caaggcatat ggcagttccc
     4021 cgaacccagc cgattcatag acgaaatgcc gcaggaagat ttgaaaatcc tggggcgcaa
     4081 aggcggcgaa ccgattgtca gcaaggaaga aggcaggcgc aaccttgccg atataatcgg
     4141 aaggctcgac aacctaaaaa aaagcggcgc ggcggattaa accggagccg caatgccgtc
     4201 tgaaggcttc agacggcata ttttttggac ggcgcgcgta aagcggttta cgcccacaaa
     4261 tcctgctgct ggtttttcgg cacaagatgc cccacgccga taccgataag gcggaacgcg
     4321 tcttccgtct gcggcgggac gcgcgccatc aacatttgcg ccgcctgaag cagggaggcg
     4381 cagtcgggca atacggagga ataagtcagc gtgcgcgtga tgatgcggaa atcgtaggtc
     4441 ttcagcttga gcgttacact ttgggcttcg acgtttttgc gcgtgatttg ccgccacaag
     4501 tcttcggcaa gatggggcaa gtgtccggca gcctgctcga gcggcaggtc ttcgggcagg
     4561 gtgatttctg tggagatttg gaggcgttcg cgttcggctt tgacggggcg ttcgtccgta
     4621 ccgcgcgcca aatcatagag gcggtagccg tagcgtccga aatggtttaa gagctcgccg
     4681 cgctcgaaac ggcgcaaatc acccgccgtc tgcataccca gcgactgcat ttttttcagc
     4741 gttaccttgc ccacgccggg gattttgccc aaaggcaggg tttccaaaaa tgccatgact
     4801 ttgtgcggcg gcaacacaaa ctgcccgttc ggcttgcgcc agtccgacgc gattttcgcc
     4861 agaaatttgt tcgacgcgat gcccgcggat gcggtcaaac ccgtttccgc aaaaatggcg
     4921 gcacggattt ctttggcaac ttcactgtcg taagggatgt ttttgaaatt acgggtaacg
     4981 tcaagatagg cttcgtccag cgacaagggt tcgattaaat cggtataacg cctgaatacg
     5041 gcgtgaatct gcgcggaaac ctgacggtac aaatcgaaat gcggcggcac atacaccgct
     5101 tgcggacaca gccttttcgc cgttgccacc gacatcgcgg aatgcagccc gaactgccgt
     5161 gcctcatacg atgcggcgca aatcaccgaa cgcgcgccct cccacgcgac gaccaccggc
     5221 cgccctttca aatgcggctg ttcgcgcagc tctaccgatg cgtagaatgc gtccatgtcg
     5281 atgtggataa ttttgcgtga agacatcggc tcttctgagg ataaaaggga tattctactg
     5341 ccggcatcgg gcaaattcca aatatacgcc ccgataggcc tgcctccata aaaatgccgt
     5401 ctgaaacata ccctgtttca gacggcatcc gcaaaactac ggttttcaat taaaactgcc
     5461 aatccagttt catgctgaca gtgcgcggtt ctccatagaa gttgtttgcg ccgcgcgtac
     5521 ggttgtagtt gttctcaaaa taagtgcgtc cgtttaagtt cgtaccgatg aggctcaatt
     5581 tagcgtgttt gcccaattcg taacggacga aaccgtctat cagcccgtag ccgccctgcc
     5641 tgatgttgta caggctgctt gtgccgcttt gtgcggacac gccgccgccg acggtcagcc
     5701 ccgtattcgg tatatggaag ctcgttccga aacggaatat gtgcacgggt gtgaaattgc
     5761 tgaagttgta cgggtctgcg cctgtgtttt tggcgaggcg ttcggcgttg acttcggcgg
     5821 cgtttttgta gcggctcttg ttgtaggtgt aacccgcaaa gactttccaa tcttcgttca
     5881 actcacccga caactcggcc tccgccccac ggctgaccac tttgcctatc ggtttggcaa
     5941 cggtttggaa cgacccctgc ttgccgcctg ctccgggaac atagccaaaa tcgacgaccg
     6001 tgcggttttt ctgttcgagg taaaacaatg cgaacgaagc attcagccgt ccttgcaaga
     6061 atgcgccttt ccagcctacc tcatagtttg tgccgaccaa aggcggcaaa acggttttgg
     6121 cactgacatc gacattatcc tgctgtttga agattttggt ataacttccg taaatactct
     6181 gttgcggtgt caagtcatag gtgatgcctg catagggcgt caatttatga ccttgcatct
     6241 tggccgtgta atggtcctga tccgccttaa tactcgatgc tgtctgaaaa tcgcttgccg
     6301 gctgcccata gcggacaggc atatctttgg tttgcgaggt ttcatagcgc gtgtagtgca
     6361 gcccgcccaa aaggtgcagt cggccggtta cgttgaaacg cgtgctggca gtcagcgaat
     6421 gggttttgtt ggtgttgagg tatttggcgt agttatacag cgcaggaaca tggtcatcgg
     6481 ccactttaac agttttccaa accggcaccg taccggaaaa accggtaaag acaggcgagc
     6541 cgtcgggatt ggtctcctga atcttgttgc ctttttcgtc cagctcatat acatcgacat
     6601 ataccggtgt ccggctgccg ctgtattcgt catagtaata cacctgcttg ccttcggcat
     6661 cgagcttggg ctcggttttt attttcttgg cattcctgca ttcttcggca taaacggtac
     6721 ggttgccttt ttcatcgtac gcctgccaat cgggttcttt atgccccctg accaaaggag
     6781 aagacaaatc accgtccggc tcccctgaca acttcccgca tacacgccgt gcgttgcccc
     6841 tgtattcgga cgtactctgt ggcggcgttc gtagatttcc agatattcgg aacgtatctt
     6901 ttcatcgccg taggcatagc cgacaaagaa atcatgctcc cgcccgaaca gcccatatgt
     6961 gccggtcagg tcaagtttaa ttccccattg gcggtcgtct ttggtatgcc gcaacggcat
     7021 ataactgtat cgtcggttgg cggtagcctt ccgattaaag gaagagtcat acaggctgtt
     7081 tggaaaacgt tgtgccgcat tattaaagat gccttccttc gcaagggctt tatcgacaaa
     7141 ttccgacttg tcggcatcaa cacccggatc cccccaagaa ccttgacaga taaagtccag
     7201 cgcaaaaggg gcactcatac actcgtcaaa accggctttg cgttctgcgg cacggcggct
     7261 gcggtactgc tcgaaagcag tattatcgaa acggttttta acaaaatcgt ctttgcgctc
     7321 acggtattcc ttggcggttt cgtcacgata tgctttcagt ttctccaatg ccttatcttt
     7381 cggctcgaac gggatgactt cgtttttttc ggtcaaaaag cctaccgcat cctcatctga
     7441 caaacccgcc gcatgttcgt ttttcagaaa aaactgcccc accttcgcat cggattcatt
     7501 cttggtataa gacacttcgg cattgagctg ccaaccgttg tcaaacacat gtttgaaacc
     7561 tgagaaaagg ttgtatttgt cagcactcaa ccgcgaccaa tcctccccca aataagtgtt
     7621 gcgcggcagt tgcaaaggcc ggttgcaggc aggcgttgaa ctgaacgggg cagttttctg
     7681 attttcacag gacaaaataa tgcccgaaaa atcaggaacc tccctactct tctgatacat
     7741 gccgcccaaa gtaagcacac tgctgtcgcc cgcatcggct tcggcaatgc cgtaaaccat
     7801 atgtttcctg ccccaaacgc ggtctttaaa cgatttttta tactcttccg cacccaccaa
     7861 ccttccgcgt aaggtattcg ccttattcag gctgcctgaa acatccaaca ctgcacgccg
     7921 gctgccgcga tggtcggcgg tcagctctcc ggtatgtttg aaagaagcgg taggtcgctt
     7981 acggatcaaa ttgacggttc cacccggctc tgaattggat tgggtcaacc ccgttgcacc
     8041 ccgtacaact tcaatatggt cataaaccgc caaatcggta ctcggagaca cgtcgatttt
     8101 cgccgtatat cccgaacggc ctgcaacatt gacggtaata ccgtcttcac caatctgatc
     8161 aatatagaaa ccgcgtgaca aaaaccgcgt ctgcaagcct gaatcgcgca caacgttgac
     8221 acccgtcgtg tttttcattg cctcttcaag cgtatgcacc gccttatcgt caaggcggct
     8281 gcgcgtgatg acgctgaccg actgcggcgt atccttgccc gcaatcctca tacctgtggc
     8341 ggtggacatc cgatctatcg tataagaacg ggtcttctcg gtcttgcccg acagagcatg
     8401 agagccgcgt acattgaccg tatccagact gacggtattg ccgtctgaaa caggcacaac
     8461 accgtctgca aaagaaccac cgtaagccga taacagcata acggtcagaa ttttaagtga
     8521 aaaatgattt tgattcatag agacctctgt aatatgcaag tgtgcaaatc gtccaaaggc
     8581 cctcacaact gttttgattt tttatattaa ttgaaaaaaa gtaattctca attaaattta
     8641 tagatgggat tgtattccca ttttgacaaa aaacaaactg ctccttaccg tttatttcaa
     8701 aaaacgataa tattgtattg aaaaatatcc gaatttaaat acagatcgtc aatgcggaaa
     8761 aaaacaccca aattggctat aatcccgaca aacacactca aggacaacaa catggcagcc
     8821 tcgcccgaag caaaattcac tgaagaaaag attttgtggg tcaaacacca cacgccgaaa
     8881 ctcatcactt tcgccatcag ccgtcccgaa tcctaccgtt ttaaagccgg acagttctcc
     8941 cgactcggtt tctacgaagg ggaaggcttt atttggcgtg cctactccat cgtttccgca
     9001 gaatatgcag acacgctcga atattttgcc gtactcatcc aagacggccc catgtcggcc
     9061 cgtttcgcca aaatgcaaca gggcgacacc atcctgctcg ataaaaatgc caccggcttc
     9121 ctcctgcccg aacgcttccc cgacggcaag gatttggtga tgctctgcac cggctccggc
     9181 atcgccccct tcctttccat tctcgaacaa cctgaaatcc gacagcgttt cgataccgtc
     9241 aacctgatac attccgtatc ttttcccgaa gaattgattt tcaacgaccg gctcgccgca
     9301 ttgtccgaac atcccctggt aggcgaatac agacactcgt tccatttcgt ccctgttacc
     9361 acccgtgccg ccaacccctc gggcttaagc ggaaaacgca ttccggaact cttaaaaaac
     9421 agcagcatcg aacaggcgct gcataccaag ttcaccccgg aatccacacg gtttatgatt
     9481 tgcggcaacc cggaaatggt caaagatact ttccaaacgc tgcttgacat gggttacgcc
     9541 atgcaccgca accgcattcc cggtcaaatc atgatggaaa acggcttcta aaaaccaccc
     9601 tgcttgtccg atgccttcgg atggacggtc aaaccgacac ggcacgaaaa ccgcgtcggc
     9661 aaaaatgccg tctgaagcct tcagacggca ttttcggata catacaaacg gcaacatatt
     9721 ccaacccaaa ccgattaggc aatcaatacg aacggctgtt tacatactta ccggctttca
     9781 ccaaccgata tcgatttaac cgatttcctt aatatttttc ctgtccgttt taaacttcgc
     9841 cttaaacgca tccggtaaat ctttatcgaa ataccaaagc ccgtcatcca tttccaatgc
     9901 gccgcccatt ccatgcagaa caactttttc ccccgttaaa ggatcggttt cggtaatttc
     9961 cacctcatgc atttttcccc aatccaaaac aggcaacttg tgtgcaaacg ccaaaacctg
    10021 ttcgtcagaa cggccgcacg ccttatcgca tcggcctgaa acatatacgg gacaaggctc
    10081 atcctctgca taaccgtccg gcaggatacc ggctgcggca ggacacaatc cgtatgtttc
    10141 cgcccacgac gacaaagccc gtctcgccgc ctttttattg gcaaataatc cggtaggcgg
    10201 attatccgtc acaccgtttt ttaaatctgc tgttttcgca ttcaatatgc cgtctgaacc
    10261 tttttcaaac ctgacggtcg taaatgtttt aagcagattt ttggcagata cgtaacaatc
    10321 caccccataa tgcctgacca attccgcttt aaccttatgg gcatgcagcc tgcccaatgc
    10381 gggaaaaaaa cggacttcct ccgtattgca ccaatcaaac ggggcttttc cggagtccaa
    10441 taaagccgaa acctcgctat atacccgttc aaacgtaccg atgtaattta ctttccctcc
    10501 gccgtcgaaa caggccagca cccccatacc gtcaggcaaa ccgtacaact gttccctcaa
    10561 ccgttcgggc agcgcggcag gcaacggttt cggattcatc aaacggaaac actgcctgat
    10621 ccactcctcg accccgtgtt ccgacaggct gtattccaaa taatcacaca acgccgacac
    10681 atccgccatc gcacgatgcc tgtcttccac aacaatcccc aacctttcga tgatactgtc
    10741 caggctgtgc ttgtaaaatt gcggatacag acaccgggac agctgcacac tgcacaaagc
    10801 aggcgatgaa aatccgatac ccgcacgatg aaactcatgc tttaaaaacg tatagtcgaa
    10861 acggctgtta tgtgcaacca gcacacaacc cttcaatacc gaaaacaact cgccggcaat
    10921 ctctgcaaaa acaggcgcat cggcaaccat gccgtctgaa atccccgtca gccccgccac
    10981 aaactgcgga atcggttttt gaggattaac caaccactca tgcctcacca cccttccctg
    11041 ctcaaacttg accaaagcca cttcggttac cctgtcttca tacagattgc cgcccgtcga
    11101 ttccaaatcg accacggcaa ccggcattcc aaaccgtaaa aatacctttt ccagcaaggg
    11161 ccagcgggaa gcaacaatca ttttattctc tttaaattca aacaacaaac cgatatttta
    11221 cacttttaag gcatttcatc caacaaaaca attgacagaa tccgatgatt accctaaaat
    11281 tcaaatcttt cttgcag
//
LOCUS       DAWKOX010000057        11114 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.057, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000057 DAWKOX010000000
VERSION     DAWKOX010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11114
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.057"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(32..235)
                     /locus_tag="WJK78_001045"
     CDS             complement(32..235)
                     /locus_tag="WJK78_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7597984.1"
                     /translation="MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(213..446)
                     /locus_tag="WJK78_001046"
     CDS             complement(213..446)
                     /locus_tag="WJK78_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ7597985.1"
                     /translation="MEAIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            984..4418
                     /gene="dnaE"
                     /locus_tag="WJK78_001047"
     CDS             984..4418
                     /gene="dnaE"
                     /locus_tag="WJK78_001047"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ7597986.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPVGAADVWIGNPNAPDKPFRAMLIIRNDAGYQRLSELLT
                     EAYVGKDRNVHHAELNPEWLENGDNSGLICLSGAHYGEVGMNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPDQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAEAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQVAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDLPRWSESEKLAEEKTVIGFYLSGHPFGPYAQEVCQIAPTKLDR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGSQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLS
                     SHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            4696..7944
                     /gene="cas9"
                     /locus_tag="WJK78_001048"
     CDS             4696..7944
                     /gene="cas9"
                     /locus_tag="WJK78_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEZ7597987.1"
                     /translation="MAAFKPNPINYILGLDIGIASVGWAMVEIDEEENPIRLIDLGVR
                     VFERAEVPKTGDSLAMARRLARSVRRLTRRRAHRLLRARRLLKREGVLQAADFDENGL
                     IKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLK
                     GVANNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELILLFEK
                     QKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPAEPKAAKNTYTAER
                     FIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYAQARKLLGLEDTAFFKG
                     LRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSSELQDEIGTAFSLFKTD
                     EDITGRLKDRVQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYG
                     DHYGKKNTEEKIYLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETARE
                     VGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKC
                     LYSGKEINLVRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFN
                     GKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEDGFKECNLNDTRYVNRFLCQFVA
                     DHILLTGKGKRRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQK
                     ITRFVRYKEMNAFDGKTIDKETGKVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFE
                     EADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGAHKDTLRSAKRFVKHN
                     EKISVKRVWLTEIKLADLENMVNYKNGREIELYEALKARLEAYGGNAKQAFDPKDNPF
                     YKKGGQLVKAVRVEKTQESGVLLNKKNAYTIADNGDMVRVDVFCKVDKKGKNQYFIVP
                     IYAWQVAENILPDIDCKGYRIDDSYTFCFSLHKYDLIAFQKDEKSKVEFAYYINCDSS
                     NGRFYLAWHDKGSKEQQFRISTQNLVLIQKYQVNELGKEIRPCRLKKRPPVR"
     gene            8010..8924
                     /gene="cas1"
                     /locus_tag="WJK78_001049"
     CDS             8010..8924
                     /gene="cas1"
                     /locus_tag="WJK78_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEZ7597988.1"
                     /translation="MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIEN
                     RETLITAPLLSALAEHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKK
                     QFWQHIVRQKILNQAFIADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALF
                     GEKFTRNDNNAVNAALNYTYAVLRAAVARTLTLYGWLPALGLFHRSELNPFNLADDFI
                     EPLRPLADLTVIHLYEQGRLKAELTPGIKQHLIKTLHYQISIERQHFSTLAAIDKMVS
                     SFQAGVTDKNAKQLKLPEILPLKEYRYE"
     gene            8917..9243
                     /gene="cas2"
                     /locus_tag="WJK78_001050"
     CDS             8917..9243
                     /gene="cas2"
                     /locus_tag="WJK78_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEZ7597989.1"
                     /translation="MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLS
                     VYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNS
                     DQLLLF"
     repeat_region   9307..10661
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=9307..9342
                     /rpt_unit_seq="attgtagcactgcgaaatgagaatgggagctacaac"
BASE COUNT         3137 a         2856 c         2682 g         2439 t
ORIGIN      
        1 tgttaattca ctatatcaag ccgaaccgtt ttcagacggc atcgtccgac caacccgctt
       61 ctttcaattt ccgccgttgc gcgtcgtagc gggccttatc cgcccaataa atcgtctgaa
      121 tacacgcctc gccgcagtcg ctgccgcagc attcccacga ctcgggtcgg acgggttcgt
      181 ctaaaagcgg ctcgcccaaa agggcttcgg ctttatgctt cagggtcata tccatcggcg
      241 atttccaagc gcgcaccgtc aaactcgatg acttcgccgc cgcgtatttt ggcggtttta
      301 cgggtttcgg tttcgccgtt gcgcgacacc aacccttcgg caatcaacgc cttcgcctgt
      361 ccgccgcttt cggcaagtcc ggccaatttc aagaggtcgc acaaggcgat gtattcgttg
      421 tcttcgagat agacgatggc ttccatgatg tccccttgca gaaagagacc gttattgtag
      481 cacctgccgc cgccgtaccc aaaattaccg caaaaccagc gatgtatccg caccgcctgt
      541 tccgtaaaag taaaaatgcc gtctgaaacc ccgtatgccg caatccgttc aaagaaatcc
      601 tgcccaacgg cagactgcaa atcctgttcc ccgacgaatc cgcattgacg ctgatgcaca
      661 tcctcaaaca cgaactgccc gatacaccgg caatcggcat caaaacgaaa tcaaaaacct
      721 gtttgaacgt aaaattaatt taactgcttg ccatccgtcc gaataaggta tatagttcct
      781 tataactagt ttgatagtcc tttatatcta tcaatactcc ttgggaagcc tccaccacac
      841 ggtaggaggc atttttttgc cgtcgtaaaa gctcaaaaac atttgcaggt catgccgtct
      901 gaatctgaaa cggcatgacc tacaccgcca tctaaagaca accctgctac aatacgcctt
      961 ttattgttca cgccgatttt gccatgaccg agccgaccta catccccctg cgcctgcata
     1021 ccgagttctc aattaccgac ggtatggtgc ggattaaaaa actgattgcc aaagcgcagg
     1081 aatacggttt gcctgctttg ggcatcagcg atttgatgaa cgaattcggt ttggtgaaat
     1141 tctataaagc ctgccgcagt gcggggatta agcctgtcgg ggcggcggac gtgtggatag
     1201 gcaatccgaa tgcgcccgac aagccgttcc gcgccatgtt gattatccgc aacgatgcgg
     1261 gctatcagcg tttgagtgag cttttgacag aggcctatgt cggtaaagac cgcaatgtcc
     1321 atcatgcgga actcaacccc gaatggctgg aaaacggcga caacagcggc ttgatttgtt
     1381 tgagcggcgc gcattacggc gaagtgggca tgaatctgtt gaacggcaat gaagacgcgg
     1441 cgcgcgcggc ggcgttgaaa tatgcggcat ggtttcccga tgcgttttat ttagagctgc
     1501 aacgcctgcc cgaacgcccc gaatgggagg cttgcgtttc cggcagcgtg aagctggcgg
     1561 aggaactggg tttgccggtg gtggcgacgc atccgacgca gtttatgaac cgcgacgatt
     1621 tcaacgcgca cgaggcgcgg gtgtgtatcg cgggcggctg ggtattgacg gacaaaaaac
     1681 gtccgcgcga tttcacgccg gaccagtttt tcattccgcc ggaaacgatg ctggagcgtt
     1741 tcgccgactt gcccgaagcc ttggaaaaca cggtggaaat cgccaaacgc tgcaacctgc
     1801 acatcacatt gggcaaaaac ttcctgcccc ttttccccac gcccgacggt ttatcgcgcg
     1861 atgactatct catcaaactc tcaaacaagg gcttgcagga acgcatggtt cagctttatc
     1921 ccgacgaggc ggagcgtgcg gcaaaaatgc cggaatatca ggaacgtttg gattttgagc
     1981 tgaacatcat catccagatg aaattccccg gctatttcct tatcgtacaa gactttatca
     2041 actgggcgaa aacgcacggc tgtccggtcg ggccgggacg cggttcgggc gcgggttcgc
     2101 tggtggcgta ttcgctgaaa attaccgacc tcgacccgct caaatacgcg ctgctgttcg
     2161 aacgtttctt gaaccctgaa cgcgtttcca tgcccgactt cgacgtggac ttctgtcagg
     2221 caaaccgcgg ccgcgtgatt gaatatgtac gcgaaaaata cggtgcggaa gcagtcagcc
     2281 agattgttac cttcggcacg atgtcgtcca aagcagtgat tcgcgacgtg gggcgcgtac
     2341 tggaactgcc gtttatgctg tgcgacaaac tgtccaagct gattccgttg gaagccaaca
     2401 aacctttggg tttggacgac gcgatgaagg cggagccgca gattcaggaa ttaatcgaag
     2461 cggaagaagc ggacgaactg attacgctgg cgaaaaagct ggaagatttg acgcgcggtt
     2521 tgggtatgca cgcgggcggc gtgttgattg cgccgggcaa gatttccgat tacagccccg
     2581 tgtatcaggc ggacgaatcc gcctcgcccg tatccatgta cgacaagggc gacgtggaag
     2641 acgtgggttt ggtgaaattc gactttttag gtctgcgcaa cctgaccatc atcgaaatgg
     2701 cgcagaacaa catcaaaaac accaccggcg acatcatcga tgtcggcaaa attccgcttg
     2761 acgaccaggt tgcctaccaa atcttccgcg atgcgaacac caccgccgtg ttccagttcg
     2821 agtcgacagg catgaagaaa atgctgaaaa cagcgcatac gaccaagttt gaagaactta
     2881 tcgccttcgt atcgctctac cgacccggcc cgatggacaa tattcccgac ttcgtcgcgc
     2941 gtatgaaagg tcaggaattc caatacatcc acccgctact cgaaggcatc ctcgcaccaa
     3001 cctacgggat tatggtgtat caggaacaag tgatgcaggc ggcgcagatt atcggcggct
     3061 actcgctcgg cggcgcggac ctgctgcgcc gcgcgatggg taagaaaaag cccgaagaaa
     3121 tggtgaaaca ccgcgaaatc ttcgccgaag gcgcggcaaa acaaggcatt tcgcgcgaaa
     3181 aatccgacga aatcttcaac tatatggaaa aattcgccgg ctacggtttc aacaaatccc
     3241 acgccgccgc ctacgccctg atttcctacc agaccgcatg gctcaaggcg cactaccccg
     3301 ccgaatttat ggcggcgacc atgtcgtccg aattggacaa caccgaccag ctcaagcatt
     3361 tctacgacga ctgccgcgcc aacggcatcg agttcctgcc gcccgacatc aacgaatccg
     3421 actaccgctt tacgccgtat ccggacatga aaatccgcta cgcgctcggc gcgattaaag
     3481 gcacgggcga agccgccgtc gaatccatca ccgccgcgcg gcaaagcggc ggcaagttta
     3541 ccggcctgtt ggacttctgc gagcgcgtcg gcaaagaaca catgaaccgc cgcaccctcg
     3601 aagccctgat acgcggcggc gcgttcgaca gtatcgaacc caaccgcgcc atgctcttgg
     3661 cgaacatcga cctcgctatg gacaacgccg accaaaaagc cgccaacgcc aatcagggcg
     3721 ggctgttcga catgatggaa gacgccatcg aaccggtgcg gctcatcgac ctgccgaggt
     3781 ggagcgaatc ggaaaaactc gccgaagaaa aaaccgtcat cggcttttac ctgtccggcc
     3841 acccgttcgg cccgtatgcc caagaagtct gccaaatcgc accgaccaaa ttagaccgtc
     3901 tgaagccgca agacagcgtg cgcctcgccg gattcgttac cgccgtgcgt acgatgatgg
     3961 gcaagcgcgg caaaatcgcc ttcgtcagcc ttgaagattt gagcgggcag gttgaaatca
     4021 tggtcggcag tcagacgctg gaaaactgcg ccgactgcct caaagccgac caagtgctga
     4081 ttatcgaatc caaagtcagc cgcgacgact acggcggcgg cgacggactg cgcatcatgg
     4141 caaaccaagt catgaccctg caaacggcac gcgaacgcta cgcccgcagc ctcagcctcg
     4201 ccctcgcccc gcatcacgac atcggcggac tggtacggct gctctcctcc caccaactgc
     4261 ccgacacgcc gcgcatcccg ctgcaactgt cgtatgccaa cgaaaaagcg tcgggcaggc
     4321 ttcaagtgcc gccgaaatgg acggttacac cgagctccgc attgttcggc gaactggaaa
     4381 cattgctcgg cagccggtcg gtgcgcgtca actggtaacc caaaatataa atgccgtctg
     4441 aagcccaaaa tcggtttcag acggcatttt ttaaccgaaa taaacgatgc cccttaaagc
     4501 agaagcttta aggggcagag cgttgcggca catcttttca gacggcctta ttgtagcaac
     4561 ggttctcatt tcgcagtgcg acaatatgtt tgggattcta gccgttgtga gatgataagt
     4621 caataatcta tttgtatata aataagacaa taagatatat tatcattatt tgcaacgttg
     4681 tttacggagt aataaatggc tgccttcaaa cctaatccaa tcaactacat cctcggcctc
     4741 gatatcggca tcgcatccgt cggctgggcg atggtagaaa ttgacgaaga agaaaacccc
     4801 atccgcctga ttgatttggg cgtgcgcgta tttgagcgtg ccgaagtacc gaaaacaggc
     4861 gactcccttg ccatggcaag gcgtttggcg cgcagtgtcc gccgcctgac ccgccgtcgc
     4921 gcccatcgcc tgcttcgggc ccgccgccta ttgaaacgcg aaggcgtatt acaagccgct
     4981 gattttgacg aaaacggctt gatcaaatcc ttaccgaata caccatggca acttcgcgca
     5041 gccgcattag accgcaaact gacgccttta gagtggtcgg cagtcttgtt gcatttaatc
     5101 aaacaccgcg gttatttgtc gcaaagaaaa aacgagggcg aaactgccga taaagagctt
     5161 ggcgctttgc ttaaaggcgt ggccaacaat gcccatgcct tacagacagg cgatttccgc
     5221 acaccggccg aattggcttt aaataaattt gagaaagaaa gcggccatat ccgcaatcag
     5281 cgcggcgatt attcgcatac gttcagccgc aaagatttac aggcggagct gattttgctg
     5341 tttgaaaaac aaaaagaatt tggcaatccg catgtttcag gcggccttaa agaaggtatt
     5401 gaaaccctac tgatgacgca acgccctgcc ctgtccggcg atgccgttca aaaaatgttg
     5461 gggcattgca ccttcgaacc ggcagagccg aaagccgcta aaaacaccta cacagccgaa
     5521 cgtttcatct ggctgaccaa gctgaacaac ctgcgtattt tagagcaagg cagcgagcgg
     5581 ccattgaccg ataccgaacg cgccacgctt atggacgagc catacagaaa atccaaactg
     5641 acttacgcac aagcccgtaa gctgctgggt ttagaagata ccgccttttt caaaggcttg
     5701 cgctatggta aagacaatgc cgaagcctca acattgatgg aaatgaaggc ctaccatgcc
     5761 atcagccgtg cactggaaaa agaaggattg aaagataaaa aatccccatt aaacctttct
     5821 tccgaattac aagatgaaat cggcacggca ttctccctgt tcaaaaccga tgaagacatt
     5881 acaggccgtc tgaaagaccg tgttcagccc gaaatcttag aagcgctgtt gaaacacatc
     5941 agcttcgata agttcgtcca aatttccttg aaagcattgc gccgaattgt gcctctaatg
     6001 gagcaaggca aacgttacga tgaagcctgc gccgaaatct acggagacca ttacggcaag
     6061 aaaaatacgg aagaaaaaat ttatctgccg cccatccctg ccgacgagat ccgcaacccc
     6121 gtcgtcttgc gcgccttatc tcaagcacgt aaggtcatta acggcgtggt acgccgttac
     6181 ggctccccag ctcgtatcca tattgaaacg gcaagggaag taggtaaatc gtttaaagac
     6241 cgcaaagaaa tcgaaaaacg ccaagaagaa aaccgcaaag accgggaaaa agccgccgcc
     6301 aaattccgag agtatttccc caattttgtc ggcgaaccca aatcaaaaga tattctgaaa
     6361 ctgcgcctgt acgagcaaca acacggcaaa tgcctgtatt cgggcaaaga aatcaactta
     6421 gtccgtctga acgaaaaagg ctatgtcgaa atcgaccatg ccctgccgtt ttcgcgcaca
     6481 tgggacgaca gtttcaacaa taaagtgctg gtattgggca gcgaaaacca aaacaaaggc
     6541 aatcaaaccc cttacgaata cttcaacggc aaagacaaca gccgcgaatg gcaggaattt
     6601 aaagcgcgtg tcgaaaccag ccgtttcccg cgcagtaaaa aacaacggat tctgctgcaa
     6661 aaattcgatg aagacggctt taaagaatgc aatctgaacg acacgcgcta cgtcaaccgt
     6721 ttcctgtgcc aatttgttgc cgaccatata ttgctgacag gtaaagggaa aagacgtgtc
     6781 tttgcctcaa acggacaaat taccaatctg ttgcgcggct tttggggatt gcgcaaagtg
     6841 cgtgcggaaa acgaccgcca tcacgccttg gacgctgtag tcgttgcctg ctcgaccgtt
     6901 gccatgcagc agaaaattac ccgttttgta cgctataaag agatgaacgc gtttgacggt
     6961 aaaaccatag acaaagaaac aggaaaagtg ctgcatcaaa aaacacactt cccacaacct
     7021 tgggaatttt tcgcacaaga agtcatgatt cgcgtcttcg gcaaaccgga cggcaaaccc
     7081 gaattcgaag aagccgatac cccagaaaaa ctgcgcacgt tgcttgccga aaaattatca
     7141 tctcgccccg aagccgtaca cgaatacgtt acgccactgt ttgtttcacg cgcgcccaat
     7201 cggaagatga gcggtgcaca taaagatact ttgagatctg ctaaacgatt tgttaaacat
     7261 aatgaaaaaa ttagtgttaa acgagtatgg ttaaccgaaa tcaagttggc cgaccttgaa
     7321 aatatggtta attataaaaa tggtagagag attgaattat atgaggctct taaggcgcgt
     7381 ttagaggcat atggaggtaa tgctaaacaa gcatttgacc ctaaggacaa tccgttttat
     7441 aaaaagggag gacaactggt taaagctgtg agggtcgaaa aaacccaaga gagcggagtc
     7501 ttattaaata aaaaaaatgc ttataccatt gcagataatg gagacatggt acgtgttgat
     7561 gtgttctgta aagtagataa gaaaggaaaa aatcagtatt ttattgttcc catctatgct
     7621 tggcaggttg ctgaaaacat tcttcccgat attgattgta agggataccg gattgatgat
     7681 agctatacat tctgttttag cttgcataag tatgatctga ttgcttttca aaaagatgaa
     7741 aaatctaaag tagaattcgc ctactatatc aactgtgata gctctaatgg acgattctat
     7801 ttagcttggc atgataaagg ctctaaagaa cagcaattcc gtattagcac ccaaaatctt
     7861 gtattgatac aaaaatacca agttaacgaa ctgggcaaag aaatcagacc atgccgtctg
     7921 aaaaaacgcc cacctgtccg ttaaattaat ctgtccctgc ttcagacggc ctgaagcagg
     7981 gattttttat atcaaaataa ggggaaaaca tgacttggcg cagcctactt attcaaaacg
     8041 gcggcaaact atccttgcaa cgccggcaac tgctgattca acaaaacggc gagtcccata
     8101 ccgtaccatt agaagacatc gccgttatca tcatcgaaaa tcgcgaaacc ctgattaccg
     8161 ccccgctcct atcagcctta gctgaacatg gcgcaaccct gctgacctgc gacgagcagt
     8221 tcctgccctg cggacaatgg ctgccttatg cccaatatca ccgccagctt aaaatcctca
     8281 agctgcaact gaacataagc gaacccttaa aaaagcaatt ctggcaacat atcgtccgcc
     8341 aaaaaatcct gaaccaagca tttatcgcag acgaaacagg caatgatctt gcagccaaac
     8401 ggctgcgcac tttggcatct gaagtccgtt cgggcgatac aggaaaccgt gaagcccaag
     8461 ctgccgccct ctacttccaa gccctctttg gcgaaaaatt tacccgtaat gacaacaatg
     8521 ccgtcaatgc cgcattgaac tacacctacg ccgtgctacg ggccgcagtt gcacgcaccc
     8581 tgaccttata cggctggctg cctgcattag gcttgtttca tagaagcgaa ctcaatccat
     8641 tcaatctcgc cgatgacttt atcgaaccct tacgcccatt agccgacctg accgtgatac
     8701 atttgtacga acaaggccgt ctgaaagccg aactgacccc cggcatcaaa caacacctta
     8761 tcaaaaccct tcactatcaa atcagcatcg aacggcaaca tttcagcacc ttggctgcca
     8821 tcgacaaaat ggtttcgtca tttcaagccg gtgtaaccga taaaaacgcc aaacaactga
     8881 aactgcctga aatcctacca ttgaaagaat accgatatga gtgaggccaa atttatgagg
     8941 attatcgtct tcttcgacct accggttatc acggcggcaa agcgcaaagc cgccaatcaa
     9001 ttccgccagt ttttattaaa agacggatac caaatgctcc agctttccgt atacagccgt
     9061 atcgtcaaag gccgcgattc gttgcaaaaa caccacaata gactatgtgc aaaccttccg
     9121 caagaaggct caatccgctg tttggagata acagaaaagc aatatgccgc catgaaactg
     9181 ctgttgggcg agctgaaaac ccaagaaaaa aaggtcaatt cagaccaatt attgttattt
     9241 taagcccatt ttttcagact aaataaaacg ggaaatcctt atagaataag gatttcccgt
     9301 tggggtattg tagcactgcg aaatgagaat gggagctaca acccctgatt gcaggtgaag
     9361 atgaactgta tgattgtagc actgcgaaat gagaatggga gctacaacaa aatcgtcggc
     9421 ctgctccagc acgacctgat tgtagcactg cgaaatgaga atgggagcta caacctaccc
     9481 gctcggcgta tatgaggcaa tctaattgta gcactgcgaa atgagaatgg gagctacaac
     9541 gcgcacgatt gacggcagca gacgagccaa attgtagcac tgcgaaatga gaatgggagc
     9601 tacaacagcg gtggtagaat cggattttta gagtgaattg tagcactgcg aaatgagaat
     9661 gggagctaca accgtttttc aggtcgaatt atcgaacctt caattgtagc actgcgaaat
     9721 gagaatggga gctacaacct cgaatggcga gtacttgacg ctcaatacat tgtagcactg
     9781 cgaaatgaga atgggagcta caaccaggtg cttgggcgta attttatccg ttggattgta
     9841 gcactgcgaa atgagaatgg gagctacaac ccttttgcaa caatcgtgct ttatttgtca
     9901 attgtagcac tgcgaaatga gaatgggagc tacaacttaa aatttacaac accgcccgac
     9961 ggcatgattg tagcactgcg aaatgagaat gggagctaca acttcctgtc ggctttttcg
    10021 gctgctttgc ggattgtagc actgcgaaat gagaatggga gctacaacgt cggcattgtt
    10081 cagggtgttc gcttcgcaat tgtagcactg cgaaatgaga atgggagcta caacagaaca
    10141 ctatggctaa aacatcaagt ggcaattgta gcactgcgaa atgagaatgg gagctacaac
    10201 tcgcgcaagc attgacgata tttgtgaggc attgtagcac tgcgaaatga gaatgggagc
    10261 tacaacaaat tttatgaaaa ccgtttccac cgccgtattg tagcactgcg aaatgagaat
    10321 gggagctaca actatgcttg ggtttgagtg ggcgattgat gaattgtagc actgcgaaat
    10381 gagaatggga gctacaacct tggcacgaga tggtcgccgt attaaattat gtagcactgc
    10441 gaaatgagaa tgggagctac aactttatgg ctattcacct gtcgagcaaa tcaattgtag
    10501 cactgcgaaa tgagaatggg agctacaaca agaagattgg gaaatgtatc tcacggaaga
    10561 ttgtagcact gcgaaatgag aatgggagct acaaccggtt tgaacagcag tatatgggaa
    10621 gaaacattgt agcactgcga aatgagaatg ggcgctacaa ccagccgttg cgataagcga
    10681 acgtgcgtta aagtcattga gacacagtgc aattatggca agaaaggcga cagatattgt
    10741 gtcacagatt tgaaataaga aaaaaccgcc cactcacaga gtaggcggaa aacttgcgtt
    10801 tttttgattg tggtcgggtt agctactgca ttgacttaac agcaaagcaa ccgctaaaat
    10861 gaacttgtgg ttcacttcaa cggacagcag caactttttc ccacgcataa ggaatttaag
    10921 cattttagct tctcctagtg aagttaatca cacaggcgag agccgaacaa aaatccccgt
    10981 tgcagcgggg atttttgctg ttccctgttt gatgattaaa ctaaaatctt gcaaaatgag
    11041 acctttgcaa aattccccaa aatcccctaa attcccacca agacatttag gggatttctc
    11101 atgagcacct tctt
//
LOCUS       DAWKOX010000058        10964 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.058, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000058 DAWKOX010000000
VERSION     DAWKOX010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10964
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.058"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            93..842
                     /locus_tag="WJK78_001051"
     CDS             93..842
                     /locus_tag="WJK78_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ7597990.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            965..1546
                     /gene="petA"
                     /locus_tag="WJK78_001052"
     CDS             965..1546
                     /gene="petA"
                     /locus_tag="WJK78_001052"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ7597991.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            1565..2914
                     /locus_tag="WJK78_001053"
     CDS             1565..2914
                     /locus_tag="WJK78_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ7597992.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            2929..3717
                     /locus_tag="WJK78_001054"
     CDS             2929..3717
                     /locus_tag="WJK78_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ7597993.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            4056..5846
                     /gene="rmuC"
                     /locus_tag="WJK78_001055"
     CDS             4056..5846
                     /gene="rmuC"
                     /locus_tag="WJK78_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ7597994.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKSRFQGVLAVLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYEHLQDENYALGNRFSAAEKQIAYLQEKEAESARLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRVETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERANEQTAFALGKPSEQEAADEAE"
     gene            complement(5914..6546)
                     /locus_tag="WJK78_001056"
     CDS             complement(5914..6546)
                     /locus_tag="WJK78_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ7597995.1"
                     /translation="MTLRYEIFPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGSHREDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLKVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            6638..7462
                     /locus_tag="WJK78_001057"
     CDS             6638..7462
                     /locus_tag="WJK78_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ7597996.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQTKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     IGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            7531..8094
                     /locus_tag="WJK78_001058"
     CDS             7531..8094
                     /locus_tag="WJK78_001058"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ7597997.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            8175..8612
                     /locus_tag="WJK78_001059"
     CDS             8175..8612
                     /locus_tag="WJK78_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ7597998.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            8681..8950
                     /locus_tag="WJK78_001060"
     CDS             8681..8950
                     /locus_tag="WJK78_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ7597999.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            8950..10725
                     /gene="ptsP"
                     /locus_tag="WJK78_001061"
     CDS             8950..10725
                     /gene="ptsP"
                     /locus_tag="WJK78_001061"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ7598000.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLENEIAKIVRCEDE
                     EKAEKLIKQINSVSVEEEADFKGRK"
BASE COUNT         2688 a         2787 c         3055 g         2434 t
ORIGIN      
        1 ataattcata tgcgggtgca aatcggaaaa atgtgaattc cggacatttt gcgattagaa
       61 tgcccgcttg tttaaagcga ttaggaaaaa agatggtatt gcgcagggat tttctgactt
      121 ggtgtaatga aacattgcag acagcgttgt ttaaagatta cgcccctaac ggtttgcagg
      181 ttgaagggag ggaatatata gggaaaatcg ttacgtcggt aacggcaagc agggcagcga
      241 ttgattttgc tgtggagcag aaggcagatt tgcttttggt acatcacggt atgttctgga
      301 aaaacgagtt gccgaccgtt actggttgga aaaaagaacg gattgccgca ctgttacggc
      361 acgacatcaa tatggcaggc taccatctgc ccctggatgc acatcccaca ctgggcaaca
      421 atgcccaact cgccgacaga ttgggttttg cgacagaaaa acggttcggc gaacaaaacc
      481 tgctcaactc gggcagcctg aaacaagcca agacactcgg cgcattggcg gcgcatattg
      541 aaacagtttt gcaacgtaag cctgtcgtca tcggcaaacc cgaacgcgaa atccgacggg
      601 ttgcatggtg cagcggcggg gcgcaggggt tttttcagac ggcaatagac gaaggtgtcg
      661 atctgtattt gacgggggaa atctctgaag ctcaatacca ccttgccaat gaaacgggta
      721 cggctttcat ttcggcaggg catcacgcga cggaacgtta cggcgtacgc gcgctggcag
      781 aatcggcggc agaggttttc gggttggaag tgtgccattt tgacgaaaac aatccggctt
      841 gagtcttgag aaatatcata aaactttacc ttattttaaa taatgctttg agtatcactg
      901 caaactgggt aaaattgcaa cgtttaatgg ctcggtattc ccaaaatatt aggacgactg
      961 aataatggat aatcaagaaa tcaacaacgg ccgccgccgt ttcctgacac tcgcgacctg
     1021 cggcgcgggc ggagtggcag cattgggtgt ggcaacgccg tttgtggcca gttttttccc
     1081 ttcggaaaaa gccaaggccg ccggtgctgc cgtcgaggtg gatgtcagta aaatcgaagc
     1141 gggtcagctg ctgaccgccg agtggcaagg caaaccgatt tgggtgctca accgtacaga
     1201 tcagcagctt aaagacctga aaggcctgaa cggcgaactt accgatccca attccgatgc
     1261 ggaacagcag ccggagtatg ctaaaaacga gacccgttcg attaagccga acatccttgt
     1321 cgccatcggt atctgcaccc atttgggctg ctcgcccacc ttccgtcccg acattgcccc
     1381 cgccgatttg ggtgcagact ggaaaggcgg cttcttctgc ccctgccacg gttcgaaatt
     1441 cgacttggcc ggccgcgtat ataaaggtgt tcctgccccg accaacctgg ttgtcccgcc
     1501 atataaatac ttgagcgaca caactatctt ggtgggcgaa gactaagaat aaggaacgat
     1561 aattatggca aaccaaacca atagcaaagc aaaagcattg ttaggctgga tggacgctcg
     1621 tttccccctg tctaaaatgt ggaatgagca tttggctcaa tactacgcac cgaaaaactt
     1681 taatttttgg tactacttcg gctctttagc cttgcttgtc ctcgtgattc aaatcgtcag
     1741 cggtattttc ctgacgatga actacaaacc ggacggtaac ctgaatgcct accatctgcc
     1801 tgctgccttt actgcagtcg agtacatcat gcgcgacgtg tccggcggtt ggattatccg
     1861 ctacatgcat tccaccggcg catctttctt cttcattgtt gtttatctgc acatgttccg
     1921 tggtttgatt tacggttcgt acaaaaaacc ccgtgagttg gtgtggattt tcggttctct
     1981 gattttcttg gcattgatgg cggaagcctt tatgggctac ctgctgcctt ggggtcagat
     2041 gtccttttgg ggtgcgcagg taattattaa cctgttctcc gccatccctg ttatcggtcc
     2101 ggatttgtcc acttggattc gcggcgactt caacgtttcc gacgttaccc tgaatcgctt
     2161 ctttgccctg cacgttatcg cggtacctct ggtattgctc ggcttggttg tggcgcacat
     2221 catcgccctg cacgaagtgg gttctaacaa ccctgacggc gttgaaatca agaaaaacaa
     2281 agacgaaaac ggtatcccgc gcgacggtat cccgttccat ccttactata ccgttaaaga
     2341 catcttgggt gtggttgtat tcctgattgt cttctgtgcc gtattgttct tcgcaccgga
     2401 aggcggcggc tacttcctcg aagcgccgaa cttcgatgcg gcaaatgcgc tgaaaacacc
     2461 tccgcacatt gcgccggtat ggtatttcac accgttctac gccattttgc gtgcgattcc
     2521 ctcgttcttg ggaacgcagg tttggggtgt aatcggtatg ggcgcggcgg tcgtgttgat
     2581 tgccctgctg ccttggctgg atagaggcga ggtgaaatcc gtccgttacc gcggcccgat
     2641 tttcaaaacc gcattggtct tgttcatcat ttcctttatc ggtttgggta ttttgggcgc
     2701 gatggtggca accgatacgc gtactttggt cgcgcgcatc ctgtccttcg tctatttcgc
     2761 attcttcctg ggtatgccgt tctataccaa gctggataaa aacaaaccgg ttcccgaacg
     2821 cgtaaccatg agcaccgcca aacaaaaaat catgttcttt gtttacgtcg gcattaccgc
     2881 cgtgggtgct tacctgtttg caaccaacat ctgatgaggg cagtcaaaat gaaacaagct
     2941 atgaaaaatt ggtttgctgc cttgctgttg gcagtaccca tgggtgcggc atttgcttcg
     3001 ggcggtcatg cacactatga gaaagtcgat atcgatttgc gcgaccaagt cagcctgcag
     3061 cgcggcgcac aaatctttac caactattgc ctgtcctgcc actcggcaag cggtatgcgt
     3121 ttcaaccgtt tgaaagacat cggtttgact gacgaagaaa tcaagaaaaa cctgatgttt
     3181 accaccgata atgtcggcga tgtcatgcat tcggcgatga acccgaaaga tgcggcaaaa
     3241 tggtttggtg ctgctccgcc cgatttgaca ttgattgcgc gttccaaagg tgcagactac
     3301 ctttacgctt atatgcgcgg cttctataaa gatccgaccc gtccgagcgg ctggaacaat
     3361 actgtattcg ataaagtcgg tatgccccac ccgttgtggg aacagcaagg cgttcaagcc
     3421 gttgagttgg atgccaaagg tcagccggtt atggtaaaag acgaacacgg cgagatgaag
     3481 cctaagctgt attgggaatc taccggtttg cacagccgcc gtctgcctaa cggcaaagtg
     3541 atccaaaaag agtacgacgc atatgtacgc gatttggtca attaccttgt gtacatgggc
     3601 gaacctgcac aactgcaacg caaacgtata ggctatgtcg tgatgatttt cctatttgcg
     3661 gttatgctgc ctttggcgta tttcctgaaa aaagaatatt ggaaagacgt acactaagcg
     3721 tttggaacaa aagggaaaat cctttagggt ttgccctttt ttcattttgc ctgccgtttg
     3781 aaaagcctga atccgtatgc cgtctgaaca tagctgcaac atttcagacg gcatcattct
     3841 aaaaatgtca gacatcggga acttaatcag ggtttgtggc agattgatat tgaattagga
     3901 aaaggtctga aaccgcaagc agcatggtaa ggcgatgtcg aacaggttta aagccaatcc
     3961 gctatatttt ttggagctat gtcgaacaaa caggtagaat cggaataagc ggcggttttg
     4021 tccggtgtga aaatgtttga atattaggat gattgatgga actgatgact gttttgctgc
     4081 ctttggcggc gttggtgtcg ggcgtgttgt ttacatggtt actgatgaag agccggtttc
     4141 aaggtgtatt agccgtattg aacgcgcaat tggcggaaaa ggcggcaaga tgtgattttg
     4201 ttgaacaggc acacgcagaa attgcatcgg aattggccgt tttggatggg aaatacgagc
     4261 atttgcagga cgaaaattat gctttgggca accgtttttc cgcagccgaa aagcagattg
     4321 cttatttgca ggaaaaagag gcggagtcgg cgcgtctgaa gcagtcgtat atcgagttgc
     4381 aggaaaaggc acagggtttg gcggttgaaa acgaacgttt ggcaacgcag ctcggacagg
     4441 agcggaaggc atttgccgac caatatgccc tggaacgcca aatccgccaa agagtcgaaa
     4501 ccgatttgga agaaagccgc caaactgtcc gcgacgtgca aaacgacctt tccgatgtgg
     4561 gcaaccgttt tgccgcagcc gaaaaacaga ttgcccattt gcaggaaaaa gaggcggaag
     4621 cggagcggtt gaggcagtcg cataccgagt tgcaggaaaa ggcacagggt ttggcggttg
     4681 aaaacgaacg tttggcaacg caaatcgaac aggaacgcct tgcttctgaa gagaagctgt
     4741 ccttgctggg cgaggcgcgc aagagtttga gcgatcagtt tcaaaatctt gctaacacga
     4801 ttttggaaga aaaaagccgc cgttttaccg agcagaaccg ggagcagctc catcaggttt
     4861 tgaacccgct gaacgaacgc atccacggtt tcggcgagtt ggtcaagcaa acctatgata
     4921 aagaatcgcg cgagcggctg acgttggaaa acgaattgaa acggcttcaa ggattgaatg
     4981 cgcagctgca cagcgaggca aaggcactga ccaacgcgct gaccggtacg cagaacaagg
     5041 ttcagggcaa ttggggcgaa atgattctgg aaacggtttt ggaaaattcc ggcctccaga
     5101 aagggcgcga atatgtggtt caggcggcat ccgtccgaaa agaggaagac ggcggcacgc
     5161 gccgcctcca gcccgacgtt ttggtcaacc tgcccgacaa caagcagatt gtgattgatt
     5221 ccaaggtctc gctgacagct tatgtgcgct acacgcaggc ggcggatgcg gatacggcgg
     5281 cacgcgaact ggcggcacac gttgccagca tccgtgcaca catgaaaggc ttgtcgctga
     5341 aggattacac cgatttggaa ggtgtgaaca cattggattt cgtctttatg tttatccctg
     5401 tcgaaccggc ctacctgttg gcgttgcaga atgacgctgg cttgttccaa gagtgtttcg
     5461 acaaacggat tatgctggtc ggccccagta cgctgctggc gactttgcgg acggtggcga
     5521 atatttggcg caacgagcag caaaaccaaa acgcgctggc gattgcggac gaaggcggca
     5581 agctgtacga caaatttgtc ggctttgtac agacgctcga aagcgtcggc aaaggcatcg
     5641 atcaggcgca aaacagcttt cagacggcat tcaagcaact tgccgagggg cgcgggaatc
     5701 tggtcggccg cgccgagaaa ctgcgtctgt tgggcgtgaa ggcaggcaaa cagcttcaac
     5761 gggatttggt cgagcgtgcc aacgaacaga cggcatttgc tttgggcaaa ccttcggaac
     5821 aggaagcggc tgacgaagcc gaataggaaa ggcggatgcg tttcagacgg catcagtgca
     5881 gatgacgccg tctgaagacc gtagtgaagt cggttagaaa aacggattgt gccgtttttc
     5941 gtgtccgatg gaagtcatac gcccgtgtcc ggcgacaact tgcacggttt cggggagggc
     6001 gaataatttg ttgcggatat tattgattaa gtcggcgtgg ttgccgcgcg gaaaatcggt
     6061 tctgcctatg gtttcgtaaa acagcacgtc gcccgcaatc agcagctccg cttcggcaca
     6121 atagaaaacc acgtgtcccg gcgtgtgccc cggaatatgc agcacttgaa aggcatagcg
     6181 tccgactttg agcgtttcgc cttcttcgag ccaacggttc ggcgcaaagg cgggcgagac
     6241 gggaaatccg tattgcgcgg tggtttgcgg cagcgattgg agcaggaatt catcttcgcg
     6301 gtgcgaaccg aggacaggga ctttatgcgt tttcaacatt tcgaccacgc cgcccgcgtg
     6361 atcgagatgg ccgtgcgtca gccagattgc cgtgagcgta agtttgcggt ttgccaacgc
     6421 ttgcagcagg aacggcacgt cgccgccgac atcggtcagg acggcttcgc cgctttcgtc
     6481 gtcccaaatc agggtgcagt tttggcggaa gggggtaacg gggaagattt cgtaacgtag
     6541 ggtcatcggc gtgttcctaa acggtttttc agacggcatc gggtttgccg tttgttttat
     6601 ggcggtttgc cgcctgtttt gatatttggg gaatcagatg attaagaaga caatcggcgg
     6661 catcataccg atttttacgg cggttttcat ccctgcatcg gcaggcgcgg cggatttgat
     6721 gctggcgcag gaatacaaag ggcaggatat tgccggctgg gcaatgagcg agaaactcga
     6781 cggcgtgcgc gcctattggg acggaaagca cctgataagc cgtcagggct acgcgtttac
     6841 gccccccaaa ggctttaccg cgcagtttcc gccttatcct ttggacggcg aattgtatag
     6901 cggacgtggt cagttcgagc agatttccgc taccgtgcgt tctgtttctt cagactggcg
     6961 cggcatccgc ctgcacgttt tcgatgtacc caaggcgcag ggcaatctct accaacgttt
     7021 ggcagtcgca acgcagtggc tgaaaacgca tccgaacgcg ccgattacca tcatcccgca
     7081 aaccaaagtg cgcgaccggc agcacgcgat ggacttttta aaacaaatcg aagcgcaggg
     7141 cggcgaaggc gtgatgctgc gtcagcccga atcccgttac agcggcggca ggagcagcca
     7201 attattgaag ctgaaaagcc aatacgacga cgaatgcacg gtaacgcggc actatgaggg
     7261 caaagggcga aacgccggac ggttgggcgc gatcggctgc aaaaaccggc acggcgaatt
     7321 ccgcatcggc agcggtttca aagacaaaga ccgcgacaac ccgcccaaaa tcggcacact
     7381 gattacctac cgctaccgtg gttttacgcg gaaaggcacg ccgaaatttg ccacatttgt
     7441 gcgcgtgcgt accgaccgct gagcaggacg gttcagacgg catccgatac tttggtttat
     7501 aattttcctt ttaccgaccg attccgacat atgaccgatt tagaaaccaa acgccttgaa
     7561 acacaggcga tgcttgaaaa cgccgatctt ttgttcgacc aaggccaatg ccgtgccgca
     7621 ctgcaaaaag tggcggacga gattacgcgc gatttgggcg gcaaatatcc gctgctgctg
     7681 cccgtgatgg gcggcgcggt ggtgtttacg gggcagttgc tgccgctgtt gcgttttccc
     7741 ttagattttg attatgttca cgtttcccgt tacggcgaca agctggaggg cggcgcgttc
     7801 aactggaagc gtatgcccga tgcggaacaa atccggggca ggcacgtcgt cgtgctggac
     7861 gatattttgg acgaagggca tacgatgtcc gccattcaag ccaaactttt ggaaatgggt
     7921 gcggcaagct gccgtgcggc ggtgttcgcc aacaagctga ttgacaaacc caagcctatc
     7981 cgagccgatt atgtcggact ggatgtgccg aaccgttatg ttttcggtta cggcatggat
     8041 gcggcgggct gctggcgcaa tttgggcgag atttacgcat tggacggaaa ataaggacgc
     8101 gatgccgtct gaaggctgtt cagacggcat tgcgcccata cgccggcagg acaacgagga
     8161 acaggacgca taatatgata gggcttttaa tcatcacaca cgaaaccata ggcgaagcct
     8221 accgcaagct ggcacatcat ttttttccgg gcggactgcc tgaaaacgtc cgcatactcg
     8281 gcgtgcagcc gacggaagac caagacgaca tcatcaacaa cgccattgcc gcgcttcagg
     8341 agtttcccga caacgacggc gtgctaatta tgaccgatat tttcggcgcg accccctgca
     8401 atgccgcccg ccgcctcgtg cgcgaaaaca aatcggcgat tttgaccggg ctgaacgcgc
     8461 cgatgatggt taaggccgtc caatattcgc cggcggcgga agaccttgcc gcctttaccg
     8521 aatgcgtcag ggaggcggct gtaaaaggca ttttcgccat cacgtccgcg cccgaagatt
     8581 tggtgtgccg gcgcagcggc gatgccgtct gaagaagcgg cagggcagga aaacatttta
     8641 aacggcgtct gctgccgata tacataacac gggaaccgaa atgctcaaac aatccatcga
     8701 aatcatcaac aaactcggac tccacgcccg cgcgtccaac aagttcaccc aaaccgcgtc
     8761 ccaattcaaa agcgaagtct gggttacgaa aaacgacagc cgcgtcaacg gcaaaagcat
     8821 tatggggctg atgatgctcg ccgccgccaa gggtacggtc atcgaactgg agacggacgg
     8881 cgcggacgag gcggaagcga tgcgcgccct gaccgactta atcaacggct acttcggcga
     8941 gggcgaataa tgagtatcgt gctgcacggc gtggcggcgg gcaaaggcat tgccgtcggt
     9001 tgcgcccacc tgattgcgcg cggtacggag gaagtgccgc agtatgatgt tgcggaggcg
     9061 gacaccgatg ccgaagccga acgtttcgat gccgccgtca aagccacgcg caaagagttg
     9121 gaacagctcc gcagcgcgat tcccgaaaac gccccgaccg agttgggcgc gttcatctcg
     9181 ctgcacctga tgctcttgac cgatgttacc ttgtcgcgcg aacccgtcga tattttaagg
     9241 gaacaaaaaa tcaacgccga gtgggcattg aagcagcaga gcgacaaact cgccgcccaa
     9301 ttcgacaata tggacgatgc ctatttgcgc gaacgcaagc aggatatgct gcaagtcgtc
     9361 cgccgcatcc acaacaacct gatcgggcag ggcaacgagt tggaagttgc cgacaacctg
     9421 tttgacgaaa ccgttctgat tgcaaacgac ctttcgcccg ccgacacggt tttgtttaaa
     9481 gagcagcgca ttgccgcctt cgttaccgat gccggcggcc ccaccgggca tacggcgatt
     9541 ttgggcagga gcttggacat cccgtccgtc gtcgggctgc acaacgcgcg caaactgatt
     9601 accgaaggcg aaacggtcat tgtggacggt atcaacggcg tgttgattat cgcgccggat
     9661 gagtcggtgt tgaacgaata ccgccgccgt gcccgcgaat accgcagcca caaacgcgat
     9721 ttgaacaagc tcaaaaaaac cgccgccgcc accgccgacg gggtctgcat cgagcttgtg
     9781 ggcaatatag aatccgccga agacgtgaaa ccgctgcaca acctcggcgc agacggcatc
     9841 gggctgttcc gcagcgagtt tctttacctg aaccgcgata cgatgccgtc tgaagacgag
     9901 cagtacgaag tgtacagcgc gattgtcaaa aaaatgaaag gcaaaagcgt aacgatacgg
     9961 acagtcgatt tgggtgtgga caaaaacccg cgctggttcg ggaaaaacag cacgcccaac
    10021 ggcagcctca accccgcgct gggcatgacc ggcatccgcc tgtgccttgc cgaaccggtc
    10081 atgttccgca cccagatgcg cgccatcctc cgtgcggcgg tacacggccc cgtgcggatg
    10141 atgtggccga tgattacctc agtatccgaa gtgcgccagt gcctcatcca cctcgacacc
    10201 gcgcaacgcc agcttgccga acgcggcgat gccttcggta aagtcggcat cggctgtatg
    10261 attgaaattc cgtctgccgc gctgaccgtc ggcagtattt tgaaactggt cgatttcatc
    10321 tccgtcggta ccaacgacct gattcaatac atcttgtccg tcgatcgcgg cgacgacagc
    10381 gtcagccacc tctaccagcc cggccatccc gccgtgctga aaatgctgca acacgtcatc
    10441 cgtaccgcca accgcatgga caaagacgta tccgtatgcg gcgagatggc gggcgatacc
    10501 gcgtttaccc gcgttttatt gggtatgggg ctgcgccgtt tttccatgaa ccccaacaac
    10561 atcctgcccg tcaaaaacat cattctgcac agcaatgtcg gacagctcga aaacgagatt
    10621 gccaaaatcg tccgttgcga ggacgaggaa aaggcggaaa agctgatcaa acagatcaac
    10681 agcgtgtctg tcgaggaaga agccgacttc aaggggcgga aataaatacg gcaggtaaaa
    10741 aatagaaata cttaacaatg cccgcaatct gaaattttgc cattcttgca aaatagaaaa
    10801 ccgaaacaga aacccaaaat cggccattcc ctcaaaaaca gaaaaccaaa atcagaaacc
    10861 taaaatccgt cattcccgcg caggcgggaa tctaggtctg tcggcacgga aacttatcgg
    10921 gtaaaacggt ttctttagat tttacgttct ggattcccgc ctgc
//
LOCUS       DAWKOX010000059        10796 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.059, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000059 DAWKOX010000000
VERSION     DAWKOX010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10796
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.059"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            123..305
                     /locus_tag="WJK78_001062"
     CDS             123..305
                     /locus_tag="WJK78_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598001.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            complement(367..1368)
                     /locus_tag="WJK78_001063"
     CDS             complement(367..1368)
                     /locus_tag="WJK78_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ7598002.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(1445..5278)
                     /locus_tag="WJK78_001064"
     CDS             complement(1445..5278)
                     /locus_tag="WJK78_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ7598003.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALIREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEIAPLVRALIELDLVIIPRGGGTGYTGGAIPLDANSAVIN
                     TEKLDKHRGVEYVELAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWEWLLANLDAPLADYKVRYGSA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLSDEEMQPFWDYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSIKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYADDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5539..5635
                     /gene="ffs"
                     /locus_tag="WJK78_001065"
     ncRNA           5539..5635
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WJK78_001065"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5803..7494
                     /gene="dld"
                     /locus_tag="WJK78_001066"
     CDS             5803..7494
                     /gene="dld"
                     /locus_tag="WJK78_001066"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ7598004.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            7626..7733
                     /locus_tag="WJK78_001067"
                     /pseudo
     CDS             7626..7733
                     /locus_tag="WJK78_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7789..8160
                     /locus_tag="WJK78_001068"
     CDS             7789..8160
                     /locus_tag="WJK78_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ7598005.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            8315..8863
                     /locus_tag="WJK78_001069"
     CDS             8315..8863
                     /locus_tag="WJK78_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ7598006.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            8997..10088
                     /locus_tag="WJK78_001070"
     CDS             8997..10088
                     /locus_tag="WJK78_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ7598007.1"
                     /translation="MNAQTLIANVAEFVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNRAVKDK
                     YLADILQGKVLAGTGMSNTVKHLADIEKHNLQAERVEGGYTVNGALPWVSNIGEDHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANVVNAEVNRYLDDGYDSLKTRLD
                     GAWAETERLAGLAWSGTPDNLTTLKLREAAAVLTLAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
     gene            10562..10732
                     /locus_tag="WJK78_001071"
     CDS             10562..10732
                     /locus_tag="WJK78_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEZ7598008.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2518 a         2977 c         2914 g         2387 t
ORIGIN      
        1 atttgtactg tcttcggctc gccgccttgt ccttatttaa atttaattca ctatatttgc
       61 ccgtgcattt gtgataaatt cggcactgta tttgatatga ttttaacaaa tcgggagggg
      121 caatgttttg gtatgtaatc ggcttttgct cctttgtcgt cgcgctgctg tcgctgtggg
      181 tcaatgtcgg cgcattcggt atgcaggaag acgatacccc gcaatcggat tatgaaaaac
      241 gtttgggctt gggtgcgaag ctgaaaaaca aaaatacgcc ggatacggaa gaaaagcagc
      301 aataaagata tgaaatgccg tctgaaagat tttcagacgg catttgcttt gaagcatggg
      361 agacagtcaa acatttatct catgctcaaa tgcgttcagg attcggcgga cttcatccgc
      421 atccttaacc gttcggacgc ggtcaaacag cgtttgcgcc gggtcgaacg tttttttcat
      481 catgcccaac cattgcttaa gacgggcgat cgggtattta ttgtttgcct cttttgtcag
      541 gcacagctcg aaaaactgcc gtatccattt ggaaacttcg gcaaaatccg tgtctttgac
      601 cggcccgccg ttctcgtatt gcttgatttg ccgcgccaaa tcggggcgga tgaccgcgcc
      661 gcgaccgagc atcacgctgt tgcagccgct gattgttttg atgccgatat agtcttgcag
      721 gctgaaaacg tcgccgttgg cggtaacggg aatattgacg ctgtctcgga ttttccttat
      781 ccattcccaa tgcgccggcg gttcgtaacc ctcggctttg gtacgcgcgt gtacggtcag
      841 tccgcatgcg cccccttcgg caatcgcaca ggcgcattcc aaagcccggc ttttgtcttc
      901 gtaaccgagc cgcatttttg cggtgagcgg aatatgtgcg ggcaaacgtc cgcgcagcgt
      961 tttgacgatg tggaatatca gttccggctc ttttaaaagg attgcgccgc ctttgtgttt
     1021 gttgacggtg ggcgcggggc agccgaagtt caaatcgatt ttgttcgcac cgaagcggac
     1081 ggcttccagc gcattcgccg ccatattgtc cgcatcgctg cccaaaagtt ggacggtgca
     1141 gggcgtgccg gaaaacgttt tgtttccgtt ggcgatttcg gggacatatt ttaaccatat
     1201 ggatcgggaa tgcacggtat gggtaatgcg tacaaattcg ctgacgcatt cgtcgtagcc
     1261 gccaatacgc gtcagcaggt cgcgcatcac gtcatcgacc agaccctgca taggggcaag
     1321 gatgattcgg gttttttgtt tgggttcggt tgtttgtccg tcaatcatga tttgggtagg
     1381 tattgggttt aaacaatgcc gtctgaaggc tttcggcgtt cagacgacat ttccgtgtcc
     1441 gttgttacag caatactttt tccacgccgc cgttgttggc ttttttcaca aactcgtcta
     1501 gccagttttc gccgagaatg tgtttcgcca tttcgatgac gatgtagtcg gcaggcatat
     1561 tgttgtcgtc ggcgtagcgg ctcaaacctt gcaggcaggc ggggcaggaa gtcagcattt
     1621 tgacgggttc gccctgcggc agctctttga ggtttttctc gatttcctct tgtttgcgga
     1681 acttgacctg agtggcgatg tctggccgtt tgacggcaaa cataccggat tcgccgcagc
     1741 agcggtcgct taaaacgact ttctgtccca tcaggctgct ggccatttgg gtggcgttca
     1801 tggttttaat cggggtgtgg caggggtcgt ggtagaggta ttgctgacct ttcacgccgt
     1861 cgagtttcac gcctttttcg agcaggtatt cgtggatgtc gatgatgcgg cagccaggga
     1921 agatttcctc gaagcggtat ttttcgagct ggtcgtaaca agtgccgcaa ctgacaacga
     1981 cggttttgat gtcgaggtag ttgagggtgt tcgccatacg gtggaaagcc acgcggttgt
     2041 tggtgctcat ttcttcggct ttagccttgt tgccgcccgc gtcttgcgga tagccgcaac
     2101 acatatagcc gggcggcagg acggtttgta cgccgacgtg ccagagcatg gcttgaacgg
     2161 caagtccgat ttggctgaac aggcgttccg aaccgcaacc cgggaagtag aacacggctt
     2221 cggcatcttc gggcgcggcg gggttgcgga tgatggggat gcttttgccg tcttcgatgc
     2281 ccaataagga gcgcggtgtt ttagcgggta cgcttttggg cagtgggcgg ttgatgaaat
     2341 ggataacctg ttctttaatc ggggctttgc cgacggttgc cttgggttcg gctttttgct
     2401 ttttcgtgcc gatcggaaga agcttgccga ttttgtaggc aaagttttgc gcggggaagc
     2461 cggtttgtat catggcggcg cgaagggctt tgatggtttt cgggccggtg gcgttcaaaa
     2521 acgccatacc catagctgcg gcaggcgcaa atcgtttgtg gccggaatcg gcaaggtagt
     2581 tgcggacggc tacggttacg tcgccgaagt cgatgttgac ggggcagggt ttgacgcagc
     2641 ggtggcacac ggtgcagtgg tcgccgatgt ccatgagttc ttcaaagtgt ttgatggaaa
     2701 cgccgcgacg ggtttgttct tcgtataaga aggcctcggt cagcaaaccc acgccgagga
     2761 ttttgttgcg ggggctgtac agcaggttgg cacgcggaac gtgggtggag cagacgggtt
     2821 tgcatttgcc gcagcgcagg cagtctttga cggaatcggc aatcgtgccg aggtctgatt
     2881 tttccataat cagcgattcc gcgcccaaaa gctcgaaaga cggcgtgtag gcgttgcgta
     2941 agtccgagcc tttcatcagt ttgtgacggt tgaaggtgtg tttgggatcg acttggtttt
     3001 tgtagtccca aaacggctgc atttcttcgt cgcttaaaaa ttcgagcttg gtgatgccga
     3061 tgccgtgttc gcccgaaatc acgcctccga gcgaacgggc gattttcata atgcgttcga
     3121 ctgagcggta tgccgtctga agcatttcgg catcgtctga gttaaccgga atattggtgt
     3181 gaacgttacc gtcgccggcg tgcatatgca gggcgacaaa gacgcggctg cgtacggttt
     3241 ttgcgtggat ttttcccaag ccttggataa ttttggtgtc ggttttgccg ctgaagattt
     3301 cagaaagcgg cttcattacg tccgctttga cagacacgcg caggcggaaa tcgcggaatg
     3361 cggtaaagca gctttcattg tctttggctt cgggcgcggc gtggacggct gagccatagc
     3421 gtactttata gtcggcaagc ggcgcgtcta agttagcaag cagccattcc caacgcgctt
     3481 tgacggcgga aacgtgggca agggcgtgtt tgccgcgttc gcccaaaagt tcggcggtcg
     3541 gcaggtcggt tcccattttg tcgatgggga gtttgccgga cagatattgt tccaaggcgg
     3601 cacagagttt gagtttgttt tggatggaaa gctcaatgtt aatgcgttcg atgccgtctg
     3661 aatactcacc gagcctttcg agtgggatga ccacgtcttc gttaatttta aaggcgttgg
     3721 tgtgtttggc gatggcggcg gtgcggctgc ggtcgagcca gaaggttttg cgcgcttcgg
     3781 gcgatacggc gataaagcct tcgccgtcgc gggcgcgggc aagttcacag atgtgctcgg
     3841 cggctgcctc tacggcggct tcgtcgtctg aaaccacgtc cgccagtaag accattttcg
     3901 gccggccttt gcctgccgct ttggtggcgt agccgacggc gcggacataa cgccagtcca
     3961 aatgttccaa acctgccagc cgaacgctgt cgtgggcgag caggaaatcg cggatttcga
     4021 cgatagaagg cgtagcggtg gcgaccgtgc cgaaaaactc catacacaca gtgcgcgtgt
     4081 atttcggcat tttgtgcaac acgaaagcaa cgccggtgat gatgccgtcc gtgccttctt
     4141 tctgtacgcc gggcaggccg ctcaagaatt tgtcggtaac gtctttgccc aaaccgactt
     4201 tgcgaaattt gtggccggga atttccaaac gttcggtttt aacgatattg aggccgtctg
     4261 aatccagcgt gtgaacgtcg aacacggcgg tttcttcgtc gtggattttg ccgaaattgt
     4321 ggcgcacacg ctcgatgcgc agccattcgc cctgcgggtt gaccatctgc cagtaggcga
     4381 ggttgtccaa cgccgtcccc cacagcacgg cttttttacc gcccgcgttc atcgccacat
     4441 taccgcccac acaggacgca tcggcggaag tcggatcgac ggcgaacacc aaacctgcct
     4501 gatgcgcggt ttcttccacc cgccgcgtaa ccacgcccgc gccgcaccgg ataatcggat
     4561 gcttgccgtc caagcctgcc agctcaacgt attcaacacc acgatgcttg tcgagttttt
     4621 cggtattgat gactgcgctg tttgcgtcca aaggaatcgc gccgccggta taacccgtgc
     4681 cgccgccgcg cggaataatg accaaatcca gctcgattaa ggcgcgcacc aaaggcgcga
     4741 tttccgcctc cgtgtcggga ttgacgacga caaacggata ctccacgcgc cagtcggttg
     4801 catcggtaac gtgcgttacc cgcgccaatc cgtcaaacat aatattgtgc ggcttggtga
     4861 ttttgctcaa acgctccaaa atctgccgcc gcttttggct ggtttcatca aaactgctat
     4921 caaaacgctc gactgctttt tctgctgcgg caaccaagac atccacttgc cgattatcgt
     4981 cgcggcgttt gcggatttcg ttcaggcggt ggcgcatttc gcgtatcaac gcggcgcggc
     5041 gtttcggatg ctccagcaaa tcatcgacca gatacggatt gcgcacgacc acccaaatat
     5101 cgcccaacac ttcaaacagc atccgcgccg aacgtccagt tttacgctgt ccgcgcaagt
     5161 cttgcagaat ctgccacgcc tcgtcgccca ataatcggat gacgatttcg cggtcggtgt
     5221 aggaagtata gttgtagggg atttcccgaa tacgctgagg ggcggtagtc gtggtcatgg
     5281 tgtgtccgtg tttggcagtt tttatttgaa tgccgtctga aaagtcggtt tcaggcgagt
     5341 ttgaaaaggc gataatgtag ttcaattttt gatacttttc aatgccgaaa caggaaatac
     5401 ccttatagaa acaaaataac gctttgagaa attgttgaca atattatcaa atataaattt
     5461 taggtggtgt ttccggcgta tgaccgtatc aaaacggttg agtttttcag aaaacccgtt
     5521 ataatgccgt ttctctgagg cgggtctccc cgcatggcaa atcggaacac cgggtcaggg
     5581 gcggaagcca gcagcccact ccgatgcgcc agtgccgggg gtttggcccg ccgccctatt
     5641 tgaaacgccg gagcttcgat gttccggcgt tcccgtatcg caccgatgcc gtctgaaagc
     5701 cgttcagacg gcatttcctt tactttgcca taacgcataa ctacaatggg aaaacaattt
     5761 caatgtgcat atgcacctgc cgacaatttt aaggaaactg ccatgagcgc atcacaatta
     5821 ctgtcaagac tgacccaaac cgtaggcgaa aaatacatca tcaccgaccc cgcgaaaacc
     5881 gaacaatacc gccaaggcta ccgcttcggc gagggtaagg cgttggcggt ggttcgcccc
     5941 ggaagcattc tggaaatgtg gaaaattctg caggcctgcg tcgaagcgga cgtgattgtg
     6001 attacgcagg cggcgaatac cggtttgacg ggcggctcga cccccgacgg caacgattac
     6061 gaccgcgaca tcgtgattgt gaacaccatg cggatgaaca tcatccaaac catcaacaac
     6121 aacgaacaag tcgtctgcct gcccggttcg accctgaacc agcttgaatt gctgctgaaa
     6181 cctttggggc gcgaaccgca ttcggtcatc ggctcatcct gtatcggtgc gtccgtcttg
     6241 ggcggcgtgt gcaacaactc cggcggcgcg ttggtacagc gcggcccggc ctacaccgaa
     6301 atggcgttgt tcgcccaaat caacgaagaa ggcaggttgg aactggtcaa ccacttgggc
     6361 atagacttgg gcgacacgcc cgaagaaatc ctgaccaacc tgcaaggtca tcattatcaa
     6421 aacaaagaca tcaaacaaga cgcgggcaaa gggcacgacc acgcctattg cgaacacgtc
     6481 cgccaagtgg acgaaccgac cgccgcgcgt ttcaatgccg accccgcccg ccattacgaa
     6541 gcctcgggct gcgcgggcaa actgatggtt tttgccgtcc gtttggacac cttcccgcaa
     6601 gaaaaacaaa ccgccgtgtt ctacatcggc acgaacgaca tcaacgagct gaccgacatc
     6661 cgccgcgccg ccttgggcga atttgaaagc ctgcctgttt ccggcgaata catccaccgc
     6721 cacgctttcg acattgccga cgtgtacggc aaagacacgt tttacgtcat caaaaaattc
     6781 ggtacgcacc aactgccgaa attatttgac ttgaaggcgc gcgtggacag gttcggcaaa
     6841 aaagccagct tcctgcccaa acatttttcc gacaaggcca tgcagttcgt cagcaaatac
     6901 ctgcccgacc acctgcccaa atccatgcgc gattaccgcg acaaatacga acaccacctg
     6961 attctgaaaa tgggcgggaa aggcgtggat gaggcgcgcg cgttcttaaa agaatatttt
     7021 gcacaccaca gcggcgcgtt tttcgagtgc aacgccgaag aaacccaagc cgcgatgctg
     7081 caccgtttcg ccgtcgcctc cgccgccatc cgctaccgcg ccgtgcatga tgacgaagtg
     7141 gaagacttgg tcgcgcttga catcgccctg cgccgcgacg accgcgactg gtttgaaaaa
     7201 ctgccgcccg aaatcgacaa taaaatcatc cacaaactct actacggaca tttcatgtgc
     7261 cacgttttcc atcaggatta catcatcaaa aaaggcaacg actgcatggc gttggaacac
     7321 gaaatgctgc atctcttaga ccaacgcggc gcgcaatatc ccgccgaaca caacgtcggt
     7381 catttgtatg aagccaagcc cgcgctcaaa cagttttacc gcaaactcga cccgaccaac
     7441 agcttcaacc cgggtatcgg caaaaccagc aaaaagaaaa actgggcgga ataagcgcgt
     7501 ccgctttgaa ggcaggcaat gccgtctgaa ggcaaaacgc cgttcagacg gcattgtcgg
     7561 gtttgaagtt ccccgtcggg taatcgcttt caaaccgtat gccgacacac gggcgcgccc
     7621 ctcccaaata tagtggatta aatttaaatc aggacaaggc aacgaagccg cagacagtac
     7681 agatagtacg gcaaggcgag gtaacgccgt actggtttaa atttaatcca ctataaagtc
     7741 tgatcctacc ttcccaaagg gcagggtttc aaccgaaaag gaaacacgat gaaaccatac
     7801 aaaatctaca cccatcccgc cctgccgccc caagccgtca aacaaggctg gtcatggccg
     7861 gggctcttgt tcggcacgct gtgggcgtgt ttcaaaagaa tgtggggttt ggggctgggg
     7921 ctgacgggcg cgatattcgt gctggctgtg tttgcccaac tggtttacgg cgacacgccc
     7981 gccacagact cggcgtttaa cgtattgggc ttggcggttt ccgtctggtt cggcgcaaag
     8041 ggcaacagcc tttatgcacg ccacctttta tcgcgcggct ataccgaatt gcccgaaacg
     8101 gttgaggcag ccaatcccca agccgcattg gcgcaatatt tcgggcgcgg gggccgataa
     8161 gcgcgttttc ttttccatca tgccgtctga aaaatgttca gacggcattt cttataacct
     8221 tttgtttgca gcacataacc aatcagtctt tcctattccg ttccgaaatg cataccatgc
     8281 gcccgtaccc aatatttgcg aacaaggaaa gaaaatggca cgtttaaccg tacacaccct
     8341 cgaaaccgcc cccgaagccg ccaaagcgcg cgtcgaggcg gtacttcaaa acaacggctt
     8401 tatccccaac cttatcggcg tattatcaaa cgcccccgaa gccttggcgt tttaccaaga
     8461 agtcggcaag ctcaacgccg ccaacagcct gaccgccggc gaagtcgaag tcatccagat
     8521 catcgccgcc cgtaccaacc aatgcggttt ttgcgtggca gggcacacca aactcgcaac
     8581 cctgaaaaaa ctcctgtccg aacaatccgt caaagccgcg cgcgctttgg cagcaggcga
     8641 atttgacgat gccaaactcg gcgcgctcgc cgcctttacc caagccgtaa tggcgaaaaa
     8701 aggcgcggta tccgacgagg aactcaaagc atttttcgat gcgggctaca accagcagca
     8761 ggcagtcgaa gtcgtgatgg gcgtagcctt ggcaaccctg tgcaactacg tcaacaacct
     8821 cggacaaacc gaaatcaacc ccgaattgca ggcttacgcc tgatacggca aaccgcccga
     8881 atatcgggcg gtttttcaaa aacaccccct caaacaaaaa caagccgcca agcggcaggg
     8941 aagcagccgc gcatcaggcg cgcccccgat tcccccgcaa accttaagga acaaagatga
     9001 acgcccaaac cctgattgcc aacgttgccg aattcgtcaa aaccaagctc aaacccatag
     9061 tggacgacat cgaccgcaaa ggatactacc ccgaagcatt tatgcgcgaa ctcggcgcaa
     9121 tcggtggatt cggcgcagtc ggtacagaag ccgaaggcgg caacggcttg ggtttggcaa
     9181 cgcaaatcgc cgtattgcgc gaaatcggca aagaatgcgg cgcaacctct ttcagtgcgt
     9241 ggtgtcaggc ggcttgcgcg tggtatctgc accaaacgcc caaccgggcc gtcaaagaca
     9301 aataccttgc cgacatcctg caaggcaaag tattggcggg tacgggcatg tccaataccg
     9361 tcaaacacct tgccgacatc gaaaaacaca acctccaagc cgagcgcgtg gagggcggct
     9421 acacagtcaa cggcgcgctg ccgtgggtgt ccaacatcgg cgaagaccac atttgggcga
     9481 ataccgccca aatcggcggc ggctacgtca tgttcatcac aggcggacaa tgggaaggcg
     9541 taagcctgca aaactgcccc gaattttgcg ccctcgaagg cacgcgcacc ttcagcctga
     9601 acttcaaaga cgtatttatc cccgacgaag acatcatcgc cgcgcccgaa cagtttgccg
     9661 actacatcca aagcatcaaa gcaggcttta tcctcctgca aatcggcatc ggcgcgggcg
     9721 tgatagacgg cagcctcggc atcatccgcc tcgccaacgt cgtcaacgcc gaagtcaacc
     9781 gctatctcga cgacggctac gacagcctca aaacaaggct ggacggcgcg tgggcagaaa
     9841 ccgaacggct cgccggattg gcttggagcg gcacgcccga caaccttacc accctcaagc
     9901 tgcgcgaagc cgccgccgta ctgacacttg ccgccgccca atccgccgcc ctgcattccg
     9961 gcgcaaaagg ctacctgatg cggagtcccg cccaaaggcg cgtccgcgaa gcaatgtttg
    10021 tcgccatcgt aactcccgcg atcaaacacc tccgcaaaga aatagcggca atcgaagccg
    10081 caaaataaac aggcggaaaa aaccgaaacc cccatcgcgt cattcccgcg aaagcgggaa
    10141 tccagccccc aacgtaacag gaatccatcg gaaaaaacag aaaccctcaa accgtcattc
    10201 ccgcaaaagc gggaatccag ccccccctaa cgcaacagga attcatcgaa aaaaccgaaa
    10261 cctccaaacc gtcattccca cggaagtggg aatccagtaa ccgaaaaacc acaggaatct
    10321 atcgaaaaaa aacccaaccc ccaaaaaaac cgggcggata cctcaccatc ctcccaaacc
    10381 ctgatttata gcggatgaac aaaaatcagg gcaagacggc gaaaccgcag acagtacaaa
    10441 tagtacgaaa ccgattcact tggtgcttga gcaccttaga gaatcgttct ctttgagcta
    10501 aggcgaggca acgccgtact ggtttttgtt catccgctat acaaaaaaca aggaaacaca
    10561 aatggcgcaa tatatgtgcg gcccctgcgg ctggatttac gatgaagaac acggcgaccc
    10621 agaacacggc atcccccccg ggacaaagtt tgaagacatt cccgacgact ggaaatgccc
    10681 cgaatgcggc gtgggcaaag aagatttcta cctgttggat ttcgtgatat agcggcagcc
    10741 gcacccttag ggaaaacccc gtcatccggc gttccgcctg cggcggcagg gaacgc
//
LOCUS       DAWKOX010000060        10607 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.060, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000060 DAWKOX010000000
VERSION     DAWKOX010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.060"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(13..1215)
                     /gene="trpB"
                     /locus_tag="WJK78_001072"
     CDS             complement(13..1215)
                     /gene="trpB"
                     /locus_tag="WJK78_001072"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ7598009.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGSPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(1298..1987)
                     /locus_tag="WJK78_001073"
     CDS             complement(1298..1987)
                     /locus_tag="WJK78_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ7598010.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLHERGIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAVYRAF
                     FEMAGLCEKQL"
     gene            2184..2963
                     /gene="rsmA"
                     /locus_tag="WJK78_001074"
     CDS             2184..2963
                     /gene="rsmA"
                     /locus_tag="WJK78_001074"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ7598011.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVGINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            3136..3864
                     /locus_tag="WJK78_001075"
     CDS             3136..3864
                     /locus_tag="WJK78_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ7598012.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            3937..4296
                     /locus_tag="WJK78_001076"
     CDS             3937..4296
                     /locus_tag="WJK78_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598013.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEADLNITPVFDNMM"
     gene            4301..4747
                     /locus_tag="WJK78_001077"
     CDS             4301..4747
                     /locus_tag="WJK78_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ7598014.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAATLAGSSMVTPYALF
                     LQWDTGGKTVRHCIMPDMTDKESYRKLKVWVLWRQPKKTAETDTSD"
     gene            4778..6052
                     /gene="folC"
                     /locus_tag="WJK78_001078"
     CDS             4778..6052
                     /gene="folC"
                     /locus_tag="WJK78_001078"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ7598015.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERTSEVKKRMKLEPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARSEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPESLLSHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDDPARNRNALPFPALRGTYQLSNAACTLTVLECLNAKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLETVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            6065..7063
                     /gene="ftsN"
                     /locus_tag="WJK78_001079"
     CDS             6065..7063
                     /gene="ftsN"
                     /locus_tag="WJK78_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ7598016.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESRKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAVGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            7056..7553
                     /locus_tag="WJK78_001080"
     CDS             7056..7553
                     /locus_tag="WJK78_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ7598017.1"
                     /translation="MNNLPVADLLVFAIIAACIVLSAMRGVIAEAGSMAAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGVLIVTLLVMLASKTDLPDTEEWQQSYTIPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            7761..9305
                     /gene="purF"
                     /locus_tag="WJK78_001081"
     CDS             7761..9305
                     /gene="purF"
                     /locus_tag="WJK78_001081"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ7598018.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLVGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMLAFRDPYGIRPLVLGSQTDNEGRKSYAVASESVA
                     FNALAYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDDIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            9405..9896
                     /gene="greB"
                     /locus_tag="WJK78_001082"
     CDS             9405..9896
                     /gene="greB"
                     /locus_tag="WJK78_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ7598019.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            9955..10581
                     /locus_tag="WJK78_001083"
     CDS             9955..10581
                     /locus_tag="WJK78_001083"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ7598020.1"
                     /translation="MRKIRTKICGITTLEDAAAAAAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTASDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT         2643 a         3076 c         2746 g         2142 t
ORIGIN      
        1 agacggacga ggttacagtt taatcccttt gagcttcgcg acggtattga tgtctttgtc
       61 gccacgaccg gataggttga ccagaatcac ttggtctttg cccattttcg gcgcgttttt
      121 caccgcccaa gcaacggcgt ggctggattc gagcgcgggg atgatgccct cgaagcggca
      181 gagcaaatca aaggcttcga gtgcttcgtc gtctttagcg acggtgtatt cgacgcgctt
      241 gatgtcgtgc agatggctgt gttccgggcc gatgccgggg taatccaagc ctgcggaaac
      301 agagtgtgta cccaagactt gaccgttttc gtcctgcatc agatagctgc ggaaaccgtg
      361 caatacgcca atcggtgagc ccgaagtaat cggcgcggcg tgatcggggg tgttcacgcc
      421 caaaccgcca gcctccacgc cgacgaggcg cacgttttct tcgccgatat acgggtggaa
      481 caaaccaatg gcgttcgatc cgccgcccac gcaggcaacg gcaacgtcgg gctgtctgcc
      541 gatggcttcc aacatttgtt ctttggcttc attgccgatc acgcattgaa agtcgcgcac
      601 catttcggga tacggcgcgg gaccggcggc ggtaccgatg atgtagaatg tgtcatccac
      661 gcgggcgacc cattcgcgca tggcttcgtt catcgcgtct ttcaaagtac ggctgccgct
      721 gtcaacgccg acgacattcg cgcccaataa tttcatacgg aacacgttgg gcatttggcg
      781 ttggatgtcg tccgcaccca tgtacacgtc gcaagtcatg ccgaagcggg cggcaacagt
      841 ggcactcgcc acgccgtgct gacccgcgcc ggtttcggcg atgacgcgtt ttttacccat
      901 acgttttgcc aacagtgcct gaccgatggt gttgttgact ttgtgcgcgc cggtgtggtt
      961 caagtcttcg cgcttcaacc agatttgcgc accgcccaaa tgctcggaca accgcgcggc
     1021 gtggtaaacg gggctgggcc tgccgacata atgtttcaaa tcgcggtgga attcttccca
     1081 aaacgacggg tcgtttttcg ctgccttata ggcatccgcc agctcttgca aagcgggaat
     1141 cagggtctcg gacacgaaca gcccgccgtg ttcgccgaaa aagcccttct cgtcgggcgc
     1201 gtggtagttc ttcatcggat tcttccttgt gcttcaggtt ttcaaacggc atttccgttt
     1261 tttcaaacat gccgtccgaa cgggaaattg tcggcaatta taactgcttt tcacacaagc
     1321 ccgccatttc gaaaaacgcc cgatacaccg ccgccttttt cgccaaactc aaaggatagg
     1381 cgcgcgaagt cgaaggcagg cgcgtcagcg tcaaatcccg tccggcaaac ggaaacggca
     1441 cggtttcgcc cgttttcggc attttgatgc cgccaccctg aatatcgagc aggatttccg
     1501 tcgccttgcc gcctgtcgta caaatatggc ggcactcggg tatttttgcc aacaccgccg
     1561 ccaaatcgac ggtttcaact acctttaaaa acttgtcgga cgcattgccg tgttcccttg
     1621 ccgccttcaa cacggtcgga caggacgcaa tcccccgttc gtgcaaaaac gccttgattt
     1681 tctcggcatc aaacgctttt tcagacaacc tttggaaatg cgccgcatca ttaaaaaaca
     1741 ccagcccgta aacgcgccac atatcgtttt ggaaattcgg ataatgaaac tgcatcgcgc
     1801 gtttgtcttc cttgggcgga aacgtcccca tcatcatgac cgcagccttc ggcggcaaca
     1861 cggaatcgaa gggatgggtt tcgatttcaa gcagattttc agacacgttc aatcctccaa
     1921 caggcaaaac ggcagacagc cggtttttgc accaaaccgc caaacacggc aagccttcaa
     1981 acagcattat cacgccctgc cgttttcggt tacaatgccg acatcaaacg gatactgtaa
     2041 acacatttat gttccaacac acaggacgac acttaaagca ccgccctatg tgccatcctg
     2101 atttggaagg agttacgccc ctcccaaata gagtctgatt ctaccgccct aaagggcggg
     2161 gtttcaaccg aaaaggaaac acgatgaaag aacacaaagc ccgcaagcgt ttcgggcaga
     2221 attttttgca ggacacgcgg atcatcagcg atattgtcaa cgccgtgcgc ccgcaggcgg
     2281 atgatgtcgt gattgaaatc ggcccgggtt tggcggcgat taccgaacct ttggcgaaaa
     2341 agctgaaccg cctgcacgtt gtcgaaatcg accgcgacat cgtatgccgt ctgaaaacgc
     2401 tgccgtttgc ggataaactg gtgattcacg aaggcgatgt attgcagttt gatttcaacg
     2461 gcatcgcagg caaaaagaaa atcgtcggca acctgcccta caacatttcc acgccgcttt
     2521 tgttcaagct ggcggaggtg gcggacgatg tcgtcgatat gcactttatg ctgcaaaaag
     2581 aagtggtcga tcgtatggtt gccgcgccga aaagcaacga ctacggccgc ttgggcgtga
     2641 tgctgcaata tttcttcgat atggaaatgc tgattgacgt gccgcccgaa tcgttcgacc
     2701 ccgcgccgaa agtggattcg gccgtcgtcc gcatgattcc ggtgaaacac cgtatcggca
     2761 aggcggacga tttcgagcat ttcgccaaac tcgtgaaact cgccttccac caacgccgca
     2821 aaaccatacg caacaatctg aaagagcttg caggcgacga tgatttgcag gcagtcggca
     2881 tcaatccgca agaccgcgcc gaacatatcg cgccggagaa atatgtggcg ttgagcaatt
     2941 atctggcggg caaggccgtc tgaaaaggga gtaagccgat gacgaaatac ctgcttttac
     3001 ccctgatact gccgcttgca gcctgcctga ccaatccgaa cgaccgtttt tttgacggca
     3061 gacgctacac gcttcatcat atggagctcc cgtaacgaca acctgcaacg gcaaatgccg
     3121 tctgaaagaa aagacatgat caaattcaaa aacgtacaca aacatttcaa agacctgcac
     3181 gtcatcaacg gcgtgaactt ggaaatcaaa aaaggcgaag tggtcgtcgt ctgcggacct
     3241 tcgggcagcg gcaaatccac actcatccgc accgtcaacc agcttgaaag catcgaaagc
     3301 ggcgagattt gggtggacgg tgtcaacgtt gccgacccaa aaaccgattt gaacaaaatc
     3361 cgcgaagaag tcggctttgt gtttcaaagt ttcaacctct acccccacct gaccgtattg
     3421 gaaaacatca ccctcgcacc gatgaaggtt aaaggtcaaa atgcggaaca ggcggagaaa
     3481 aaagcgatgg aacttttgga acgcgtcgga ctggcgcaca aaaaagacgc ttttccgtcc
     3541 caactttccg gcggccagca gcagcgcgtg gcgattgcac gcggtttggc gatggaaccg
     3601 cgcgtaatgt tgtttgacga accgacctcc gcactcgacc ccgaaatggt cggcgaagtg
     3661 ttgaaagtga tgaaagactt ggcagaaagc ggcatgacca tgatgtgcgt aacccacgaa
     3721 atggggtttg cccgcgaagt tgccgaccgc gtgattttcg tcgataaagg gcaaatcctc
     3781 gaagacgaaa cgcccgaagc gtttttcacc aacccgaaac acgaacgcgc caagcagttc
     3841 ctgcaacagg tcatgaccca ctgatgctat accgtctgaa aaccgaacgt tcagacggca
     3901 tagcccgaca ccgcaagatg attgagaaag aaaaccatgt attttgttga ccgcaccgcc
     3961 gtcgtcctca agccgaccgt ccgctttttg gaatggctca aaagcaccga cgaaaatatg
     4021 cccgacctga ccatagagca gcttcgtgcc aactgctccg tcttcctcgt tccgcagttc
     4081 gacgaaccgg aagccgtcgt ttcctatttc gacgaacgct accgccagat ttttgaagcc
     4141 gaactcgccg gctgggacat cgacaaggat aaatggccgc aagatatggg gctgaaggcg
     4201 ttttgggaat ttttcgacat cgaaatccac gatatggtgt tggatatgga agaagcggat
     4261 ttgaacatca cgcccgtgtt cgacaatatg atgtaacgcc gtgcgcgcct ttcagacagc
     4321 attgaggccg tcccgcatcc tgaacatcct gaccgtatcg ctccactcgg cttcccttgc
     4381 cgtctgcctg acctggtttt acggccggat gatgtggttc ggtttggcgg ctttggcggc
     4441 aagttacgca tactcgctca ggataacgaa tctgaaacac cgccatgcca taaccgccat
     4501 taccatagac cgcgacggac aggcggaaat cgtatccggc aaagaaaaaa cagcaaaggc
     4561 ggcaacactt gcgggcagca gtatggttac gccttatgcc ttattcttac aatgggacac
     4621 cggcggcaaa accgtccgcc actgcatcat gcccgacatg acggacaaag aatcctaccg
     4681 caagctgaaa gtctgggtac tttggcggca gccgaaaaaa accgccgaaa ccgatacatc
     4741 agactgattt cagacggcat ttgaaaacga aacactcatg aaaacactac aagactggct
     4801 ctcgcatttg gaaaccgccc acagcggcgg tttgatcgac atgggtttgg agcgcacgag
     4861 cgaagtgaaa aaacgcatga agctcgagcc gcaatgcccc gtcgtcgttg tcgcgggaac
     4921 caacggcaaa ggttcggtct gtgcctacct gacacagatt tacaaacagg cgggctacaa
     4981 aaccggtacg ctgaccagcc cgcatttatt gcgttacaac gaacgcatcg ccatcaacgc
     5041 cgaacccgtt tcggacgata cgattattgc ctctttcgag cgcatcgaag cggcgcgcag
     5101 cgaaatatcg ctgacttatt ttgaattcaa tacgttggcg gccgtcgaca tcttcatgcg
     5161 cgaacaggtt gacgtgatga tattggaagt cggcttgggc ggacgcttgg acgcggtcaa
     5221 cgcatttgac ggcgattgcg cggtggttac tagtgtagat ttggaccatc aggcgttttt
     5281 gggcgatacg gtcgagcagg tcggctttga aaaagcaggc gtgttccgca gcggcaaacc
     5341 cgcaatctgc ggtcaaaacc ccgcgcccga atcgttgctt tcacacgccg aagccatagg
     5401 cgcgaaactg ctgatggtgc agcgcgattt cgagtttcac gcgatggaaa acatccaatg
     5461 gaactaccgc ttccggccgc aacattcaga cgaccccgcg cgcaaccgca atgccctgcc
     5521 cttccccgca ttgcgcggca cataccaact ttccaacgcc gcctgcacgt tgaccgtatt
     5581 ggaatgcttg aacgccaaat tgccggtgga catcggcgcc atcaaacgcg gattgctgct
     5641 ggttgaaaat cccggacgct tccaagtcct gcccggccgt ccgctgaccg ttttggatgt
     5701 cggacacaat ccccacgctg cccgcgccct gcgccgcagc ctgattaatt tggcgtttgc
     5761 gcaaaaacgc accgccgtgt tcagcatgtt gtccgacaaa gacatagacg gcgtgttgga
     5821 aaccgttaaa gaccagtttg acgagtggta tatcgcaccg ttggatgtac cgcgcggcat
     5881 gacgctcgag agcctgcaaa acaaactgca cgaacacagc atcgaaaaca tacaaacatt
     5941 cgccgccgtc cgcgaagcat accgggcggc agcctcaaaa gcgggcgaga acgacagaat
     6001 cgtcgttttc ggctcatttc ataccgttgc cgatgtcatg tcggtacttt aaaaggaaac
     6061 ttctatgtcc gaaaacaaac aaaacgaagt cctgagcggt tacgaacaac tcaaacggcg
     6121 caaccgccgc cgcctcgtaa cggcaagttg cctggttgcc gcctcctgca tcctgctggc
     6181 agccgccctc agttccggcc ctgccgaaca gactgccggc gaaacaagcg gcgtagaaaa
     6241 caaagcggca ggtgcggcac aaacccctgc cttgaaatcc gccgccgaca aaccgcagga
     6301 cttggcaggc gaagacaagc cttctgccgc cgacagcgaa atcagcgagc ctgaaaacgt
     6361 aggcgcgccg ctggtgctga ttaacgaccg cctcgaagac agcaacatca aaggtttgga
     6421 agcatccgag aaactgcaac aggcagaaac cgccaaaacc gcaccgaagc aggcaaaaca
     6481 acgcgctgcc gaaaaagtgc cggcaactgc cgacagtacg gatacggtag cggttgaaaa
     6541 accgaaacgc actgccgaaa caaaaccgca aaaagcggaa cgcactgcca aagccaagcc
     6601 caaagccaaa gaaaccaaaa ccgccgaaaa agttgccgac aaaccgaaaa ctgccgccga
     6661 aaaaaccaaa ccggatacgg caaaatccga cagcgcggta aaagaagcga aaaaagccga
     6721 caaggctgaa agcagaaaaa cagccgaaaa agaccgttcg gacggcaaaa aacacgaaac
     6781 ggcacaaaaa accgacaaag cggacaagac caaaaccgcc gagaaggaaa aatccggtaa
     6841 aaaagccgcc attcaggcag gttatgccga aaaagaacgc gccttaagcc tccagcgcaa
     6901 aatgaaggcg gtgggtatcg attcgaccat caccgaaatt atgaccgaca acggcaaagt
     6961 ttaccgcgtc aaatcaagca actataaaaa cgcaagggat gccgaacgcg atttgaacaa
     7021 attgcgtgta cacggtatcg ccggtcaggt aacgaatgaa taacctcccc gttgccgacc
     7081 tcctcgtctt cgccatcatc gccgcctgca tcgtgctatc cgcgatgcgc ggcgtgattg
     7141 cggaggcagg ttcgatggcg gcatgggtgg tttccttctt ttttgccaaa ctctttgccg
     7201 cacccttcgc cgacctcgcc tttgcctcgt tccaaccccg cctgtttgca ttggctctgt
     7261 cgttcatttc cctgttcgtc attgcctgtc tgatccagaa aatgctccgt tcgctgctga
     7321 ccggcgcagt ttcggcggtc ggtttgggct ttgccaaccg cattttgggc ggcgtattcg
     7381 gtgcattgaa aggcgttttg attgttaccc tgctggtcat gcttgcttca aaaaccgacc
     7441 tgcccgatac cgaagagtgg cagcagtcct ataccatacc gtttttcgta tcgctttccg
     7501 aagccgtgtt gaaccatagc ggcggcacgg cggaaactcc ggaagacgat tgattgccat
     7561 acggatattt cagacggcat tctcttttat gccgtctgaa atgttttttc cttttctcag
     7621 ccatatcaca gattaaatct tatcctccat aaacccacct atctgtcctt cgctcaaata
     7681 ttgtcaacaa ttcaggcaaa aaaccaccgt ttgctttata attccgtttt acccttaaac
     7741 ctcgaatcgg agaagacgat atgtgcggcg tattaggttt ggtcagtcat gaacccgtga
     7801 accagcttct gtacgacggt ttgcagatgt tgcagcacag ggggcaggat gcggcgggca
     7861 ttgcaacggc ggaaggcggc accttccata tgcacaaagg caaagggatg gtgcgcgaag
     7921 tgttccgcac gcgcaatatg cgcgatttgg tcggcaacgc cggcatcgcc cacgtccgtt
     7981 atcctacggc gggcaacgcc ggcagcagcg cggaggcgca gcctttctac gtcagctcgc
     8041 ctttcggcat cgttttggcg cataacggca atctcaccaa cacggccgaa ctgtatgaaa
     8101 acgtgtgcaa caaacacctg cgccacgtca acaccagctc cgattccgaa gtcttgctca
     8161 acgtattcgc gcacgaatta cgccgcgaag tctccaaaaa cgccgatccg caccggctca
     8221 atgccgacaa tattttcaac gccgttgccg aagtccaccg cctagtgcgc ggcgcatacg
     8281 gcgtggttgc catgattgcg ggctacggta tgcttgcctt ccgcgaccct tacggcatcc
     8341 gcccgctggt attgggttcg caaaccgaca acgaaggcag gaaatcctat gccgtcgcct
     8401 ccgaatccgt cgccttcaac gcgcttgcct acgatttgga acgcgacatc cggccgggcg
     8461 aagcggtatt tgtcggcttt gacggcacaa tgattgcccg ccaatgcagc gaccgtgcca
     8521 aactcagccc ctgccttttt gaatatgttt attttgcccg ccccgactcc gtaatcgacg
     8581 gcgtatcggt ttaccaatcg cgcttggata tgggcgtgtc cttggcggaa aaaatcaaac
     8641 gcgagctgcc cgtggacgac atcgatgtcg tgatgcccat tcccgacacc agccgcccca
     8701 gcgcgatgga gcttgccgtc cacctcgaca aaccctaccg cgagggcttg attaaaaacc
     8761 gctatatcgg ccgcaccttt attatgcccg gccaggcgac gcgcaaaaaa tccgtgcgcc
     8821 aaaaactcag cccgatggaa accgagtttg caggcaaaag cgtgttgctg gtggacgact
     8881 ccatcgtgcg cgggacgacc agccgcgaaa tcgtcgaaat ggtacgcgcg gcgggcgcgc
     8941 gcaaagtcta tatcgcctcc gccgcccccg aagtgcgcta tcccaacgta tacggcatcg
     9001 atatgcccac gcgcgaagag ttgattgcca acgggcgcag cgcggcggaa atcgccgccg
     9061 aaatcggcgc ggacggcatc gtgttccaaa atttgagcga tttggaagcc gtcgtcaaag
     9121 cactcaatcc gaaaatcgaa tccttcgatt cgtcctgttt caacggcatt tatcagaccg
     9181 gcgacatcga tgatgcctac ctcgaccgcc tgtctgccga gaaatccggc tgcggcggcc
     9241 tgaaaatcca cccgagtagg atggaacaca gcatcagcat cagcgatgcg ggcgacgaag
     9301 aataaggctt cccaaaccgc gatgccgtct gaaatccgaa cgccgggttt tcagacggca
     9361 tttcccatat cggcatcaca tttcccattt catccgcacg caatatgagt accgaaacca
     9421 aaaactacat tacgcccgcc ggatggcagg cattgaaaga cgagctttat caactggtta
     9481 ataaagaacg ccccgaaatc gtccaaatcg tcaactgggc ggcaggcaac ggcgaccgca
     9541 gcgaaaacgg cgactatctt tacggcaaac gccgtatgcg cgaaatcgac cgccgcatcc
     9601 gtttcctgac caagcgtttg gagtccgccg tcgtcgtcga tcccgaattg cgcgaagcga
     9661 ccgaccaagt atttttcggc gcgacggtcg ggctgttgcg cggcgacggg cgcgagcaaa
     9721 ccgtcaaaat tgtcggcatc gatgaaatcg ataccgcgca aaacaaaatt tcttggattt
     9781 cgccgttggc gcgttgcctg attaaagcgc gcgaaggcga cgaagtggtt ttgaacacgc
     9841 cggaagggcg tgaggaaatt gaaatccttt ctgtcgaata catcaaaatc gactgatcgg
     9901 gaatgccgtc tgaaacggca caaacgcatc gtttcccaaa taaaggaata ccgaatgagg
     9961 aaaatccgca ccaaaatctg cggcatcacc acactggaag acgcagcggc cgccgcagcg
    10021 gcaggtgcgg atgccgtcgg gctggtcttt ttccaaggca gcagccgggc cgtcgatatt
    10081 gcccgcgcca aaaaaatcac cgccgcactg ccgccgtttg tcagcgttgt cgcccttttc
    10141 gtcaacgaaa gcgcgcaaaa catccgccgc atccttgccg aagtgccgat acacatcatc
    10201 caattccacg gcgacgaaga cgacgcattc tgccgccagt tcgaccgccc ctatatcaag
    10261 gccattcgtg ttcagacggc atcagacatc cgaaacgccg ccgaccgctt ccccgacgct
    10321 caggcactgc tgttcgatgc ctaccaccct tcggaatacg gcggcaccgg acaccgcttc
    10381 gactggacgc tgctggcgga atattcgggc aaaccgtggg tgcttgccgg cgggctgacc
    10441 cctgaaaacg tcggcgaagc cgtccgcatc accggagcgg aagcggtcga tgtatccggc
    10501 ggcgtggaag cgtctaaagg caaaaaagac ccagccaaag ttgccgcctt tatcgcaacc
    10561 gccaaccgcc tatcccgtta aagcaacaaa aattgccgcc ggaatga
//
LOCUS       DAWKOX010000061        10600 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.061, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000061 DAWKOX010000000
VERSION     DAWKOX010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10600
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.061"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(105..1322)
                     /locus_tag="WJK78_001084"
     CDS             complement(105..1322)
                     /locus_tag="WJK78_001084"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ7598021.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLDAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAVS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1524..2252)
                     /gene="rph"
                     /locus_tag="WJK78_001085"
     CDS             complement(1524..2252)
                     /gene="rph"
                     /locus_tag="WJK78_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ7598022.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2334..2798)
                     /locus_tag="WJK78_001086"
     CDS             complement(2334..2798)
                     /locus_tag="WJK78_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ7598023.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3015..3791
                     /locus_tag="WJK78_001087"
     CDS             3015..3791
                     /locus_tag="WJK78_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ7598024.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            3929..4456
                     /locus_tag="WJK78_001088"
     CDS             3929..4456
                     /locus_tag="WJK78_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598025.1"
                     /translation="MEFVNNLVIFSFLLLMLIPIFFVVYGIYHKIRYRKIYILRISFT
                     LLVVILCSMYYIYCRYLDQQKVAYYCIDEQCISIVHLYKDYGINSPTYARIYAGKILF
                     RFQVRAKNYAELLMEDDISISKKILGNKFIIYGSLPVIYGNVDNIEVKEATGYIDRAS
                     TDYIVSRNLKFRHLY"
     gene            4627..5481
                     /locus_tag="WJK78_001089"
     CDS             4627..5481
                     /locus_tag="WJK78_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ7598026.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIETYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5522..6730
                     /gene="pncB"
                     /locus_tag="WJK78_001090"
     CDS             5522..6730
                     /gene="pncB"
                     /locus_tag="WJK78_001090"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ7598027.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEVELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEVGTD
                     DKGRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6822..8540
                     /gene="argS"
                     /locus_tag="WJK78_001091"
     CDS             6822..8540
                     /gene="argS"
                     /locus_tag="WJK78_001091"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ7598028.1"
                     /translation="MNLHQTVEREAAAAFTAAGIADSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVSEFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKTGEWDADAPTVLTEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            9087..10505
                     /locus_tag="WJK78_001092"
     CDS             9087..10505
                     /locus_tag="WJK78_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ7598029.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIVGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVVAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGKM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHSKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2526 a         3014 c         2608 g         2452 t
ORIGIN      
        1 tttttgttcc aaagtcaaaa tatgccgtcc gaacattcgg gcggcagaca aaacggcact
       61 gcccgataaa ggcagtgccg ttgtccgttt caaaccgtga aacatcagcc caaattaaag
      121 gctttatgca ataccctggt tgccagttcc atgtattttt catcaatcaa tacggaaact
      181 ttgatttcgg aggtggaaat catttggatg ttgataccct cttcggcgag cgtgcggaag
      241 attttggcgg ctacaccgac gtgcgaacgc atacccaaac cgactgcaga gactttgcat
      301 acggtgtcgt cgccatcaat agaaaccgcg ccgatactgt cttggcgttc cgacaggatt
      361 tccaaagtct gcttgtaatc gccgcgcggt acggtaaagg aaaaatcggt tgtgccttcg
      421 ctgccgacat tttggataat catatcgact tcgatgttgg catcggcaac cgcgcctaaa
      481 atctgatagg cgacaccggg tttgtcgggt acgccgcgca cgttgatgcg ggcttggttt
      541 ttatcgaatg cgataccggt tacggcagct ctttccatgt tgtcgtcctc ttcaaaggta
      601 attaaggtgc cattgccgcc gtcttgcagg ctgctcagta cgcgcaggcg cactttgtat
      661 tttccggcga attctactga acggatttgc aaaactttcg aaccgaggct tgccagttcg
      721 atcatttctt caaatgtaac cgtatccatg cggcgcgctt cgggtacgac gcgggggtcg
      781 gttgtgtaaa cgccgtctac gtcggtatag atttggcact cgtcggcttt gagggctgcg
      841 gcaagcgcaa cggcggaagt gtcggaaccg ccgcgtccga gcgtggaaat atcgccttca
      901 ctgctgatgc cttggaagcc ggcaacgatg acgactttgc ctgcatcgag gtcggcacgc
      961 attttttcgt catcaatgct ttcgatgcgg gctttggtgt gggcggtatc ggttttgagg
     1021 gcgacctgcc agcctgtgta gcttttggca tccacgccga tgtctttcaa tgccatcgcc
     1081 aaaaggccga tggttacttg ttcgccggtg gacaaaacca cgtccaattc gcgcggatcg
     1141 ggatgctcct gcatttcgtg cgccaacgcg accaggcggt tggtttcacc gctcatggcg
     1201 gatacgacga cgacgatgtc gtgtccttcg gcgcgggctt tggcgacacg tttggccacg
     1261 tttttaatgc gttcgggcga gcctacggat gtgccgccgt atttgtgtac gattaacgcc
     1321 atgtttcgtg ctttcttgtg tgggattggt cgggcagcat ggtttgctgg aaaagcggct
     1381 attattacta ttttttacat gaagttcaag aacggactgc gctttcccac ctgccgtttg
     1441 acagcggtca gcaaaaaacc tgttctttca gattgttgac aaaatgccgt ctgaacggtt
     1501 ttcagacggc atccggacga caatcaggcg gcagacagcg cattttgctg gtgttgcagc
     1561 agttcgccta tgcctttttg cgccagtgca accagtttgc ccaattcgtc caaactgaac
     1621 ggcgcgtctt ccgccgtccc ctgtatttcg atgatttttc ccgatgcggt catcacgata
     1681 ttcacatcac tgtcgcaacc ggagtcttcg ggataatcca aatccaaaag cggcacgccg
     1741 ttcactacgc ctactgacac agcggcaacg gcttcgcgga tggggttttc actcaaaatg
     1801 ccgtctgaaa ccagtttgcc gacggcgatt tgcagcgcga caaacgcacc ggtaatcgaa
     1861 gccgtacgcg taccgccgtc tgcctgaatc acgtcgcagt caatcaagat ttgtcgttcg
     1921 ccgagttttt ccatatccac gaccgcgcgc agcgaacgcc cgataaggcg ttggatttct
     1981 tgtgtgcgcc cggactgttt gcccgccgaa gcttcgcggc gcatccggga agcagttgag
     2041 gcaggcagca tcccgtattc cgccgttacc cagccttggt ttttaccgcg cagaaacggc
     2101 gggacgtttt catctatgga agcggtacaa atcactttgg tattgccgca ttcaataagg
     2161 cacgaaccgt ccgtatgcgg caggaaatga ggggtgattt tgatatcgcg caggctgtcc
     2221 gcggcgcgcg agatgcggat gtaatcaggc atactgccct cccgttaaaa acagataaat
     2281 taaaaagcct taaatatgaa aaatcacatt taaggccttc aaactgaaaa tttctacgcc
     2341 tcttcggctt tgctgcggat aatcaaaagc ggcaggtggc tttggcgcat taccgtttcg
     2401 gcaaaactgc ccattaaaag gtgcatcagt ccggtacgtc cgtgcgtgcc caacaccagc
     2461 aggtcggcac cgttttcatc ggcataatca accaaatcct gcgccatttc acgcgcaccc
     2521 ttattggcaa ccagcaggtg tttgacggta ttttccacac ccagttcccg ggcggtgcgc
     2581 tcggcggcat ccaaaacttc gttgccttgc gcgacggcgg cggcttcgta gctttcgtgt
     2641 tgcaaaaatt cgggggcgag cgccatatat tcggcaggat tggcaacgtg taccaaagtc
     2701 agacgcgcac cgttgacccc ggcaagctcg gcggcatgtt tcagggcatt gatggacgtt
     2761 tcactgccgt caacggcaac aaccaaatgt ttgtacatat cgtattctcc ttttgcaccg
     2821 cctcgcggtg ccctcttgtc ggatgggcgc agggacagtt tgcgctgttt cattatagac
     2881 ccgccgtcgg gctttataca acagccgaac agcccgaccg ctttccagta taatatgccg
     2941 cttccgtgca gtcaggcatt ttttgccggc tttcgttcac tttttgattt gacgcaatct
     3001 tgcaggattc gaccatgtcc gacaacgctt tgacctcttc gcgacgcttc ggcggcatcg
     3061 ccagactcta cggagactct gccttggcgc acttttcaca ggcacacgtc tgcgtagtcg
     3121 gcgtgggcgg tgtcggctcg tgggcggtcg aggctttggc gcggacgggc atcggacgtt
     3181 tgactttgat tgatttggac aacgttgccg aatcgaatgt caaccgccag ctgcacgccc
     3241 tgaccggaga cttcggcaaa gcaaaagtta ccgccttgcg cgaacgcgtc gcccaaatca
     3301 acccagaatg ccaagtgttt gaaattgaag atttcgttac cgaagacaat ttgccggaat
     3361 acttcggaaa aggttttgat ttcgtcatcg acgcgatcga ccaagtgcgc gtcaaagcag
     3421 caatggcggc ttattttgtg gaacgcaaac aaccgtttgt cctcagcggc ggcgcgggcg
     3481 gacaaaaaaa tccggcgtta atccaaaccg ccgatttgag ccgcgtaacc cacgacccgc
     3541 tgcttgccaa cctgcgctac accttgcgga aacgctacgg attcagccgc gatacgaaag
     3601 caaatatgcg cgtgccttgc gtgtattcga ccgaaaatat cgtgccgccg cagtctaggg
     3661 aggcttgttc ggcagatgcc gctccgcaag gcttgtcgtg cgccggctac ggtgcaagca
     3721 tgctcgttac cgcttcgttc gggctatatt gcgcacaggc ggcggtggaa cacatcgcag
     3781 acaaaaaata agcaatgccg tctgaaacag gattcagacg gcatttgaac aaactatggt
     3841 tatgatttaa gacaacaaag gatacggata aaaaataaca taaaatatat gattcctaat
     3901 aatataccaa gtatcggaga gctatttaat ggaattcgtt aataatttag ttattttttc
     3961 atttttatta ctaatgctta ttccgatatt ttttgtagta tatggtatat accataagat
     4021 acgttatcgc aaaatatata tcctaagaat aagttttaca ttattagtgg taatactttg
     4081 cagtatgtat tacatatatt gccgttatct tgaccaacaa aaagtagctt attattgcat
     4141 agatgaacaa tgtatttcta ttgttcatct atacaaagat tatggtataa actctcccac
     4201 atatgcgaga atttacgcag gaaaaatatt gtttagattt caagtaagag ctaaaaatta
     4261 cgctgaatta cttatggaag atgatatatc aattagtaaa aaaattttgg ggaataaatt
     4321 tatcatttat gggtcgctac ctgtaatata cggtaatgta gataatattg aagtaaaaga
     4381 agctactggt tatatagata gagccagtac tgattatatt gtctcaagaa acttaaaatt
     4441 cagacattta tattaattaa gaggttttag caagaccgta ttcacaacct gctccttttc
     4501 aaaacatttg catttaaaag ccgttataat gccgtctgaa catctgcccg accacattat
     4561 gcgtgaatgc cggcagattg ttttcttttg taaacttata ttaaaatcca cttaccgatt
     4621 cacgccatgc cgcccatccc tgccccatcc gcaccatccg agcacactgt cgcatgggta
     4681 ttcggccaac ccgttaccga tttgccccag gatttgttta ttccgcccga tgcattgaaa
     4741 gtcgtattgg gcagttttca aggccctttg gatctactgc tgtatctgat ccgcaagcag
     4801 aacatcgatg ttctcgatat tccgatggtg aagattaccg agcagtatct gcactacatc
     4861 gcccaaatag aaacctatca gtttgatttg gcggcggaat atcttttgat ggcagcaatg
     4921 ctgattgaaa tcaaatcgcg cctgctgctg ccgcgtaccg aagccgtcga agacgaagaa
     4981 gccgacccgc gtgccgagtt ggtgcgccgc ctgttggctt atgaacagat gaagctggcg
     5041 gcacaagggt tggatgcgct tcctcgtgcg ggccgggatt tcgcgtgggc gtacctgcct
     5101 ctggaaattg ccgtcgaagc caagctgccc gaagtctata ttaccgactt gacgcaagcg
     5161 tggctgggta ttttgtctcg ggcaaaacac acgcgcagcc acgaagtaat caaagaaacc
     5221 atctccgtgc gcgcgcaaat gacggcaatc ctgcgccgtt tgaacggaca cgggatatgc
     5281 aggtttcacg acctgttcaa tcccgaacag ggcgcggctt acgtggtcgt caacttcatc
     5341 gcactgttgg agcttgccaa agaaggtttg gtcggaatcg tacaggaagt cggtttcgga
     5401 gaaatccgaa tcagcctcaa tcatgagggg gcacattcag acggcatttc cggcacacgg
     5461 ggcgggcgcg atgtgttcta atacgcccca agccgccacc aaaaatcggg agacacgcca
     5521 tatgaccggc atcatacatt cgctgcttga caccgacctc tacaaattca ctatgctgca
     5581 agtagtcctg caccagtttc cgcagacgca cagcctttac gaattccgct gccgcaacgc
     5641 ctcgaccgtc tatccgcttg ccgacatcaa agaagacttg gaagtcgaac tcgacgcgct
     5701 ctgccggctg cgcttcaccc acgacgaact cggctatctg cgctccctgc gtttcatcaa
     5761 aagcgacttt gtcgattatc tcgaactctt ccagctccaa cgccgctttg tcgaagtcgg
     5821 cacagacgat aaaggccgtc tgaacatccg catcgaaggt ccgatgatac aggcgatgtt
     5881 ctttgaaatc ttcatcctcg ccattgtcaa cgaactttac ttccgccgcc tggaaacccc
     5941 tgcagtcata gaagaaggcg aacgccgcct tcaagccaaa gccgcgcgcc tcaaagaaat
     6001 cgccgccgca caaaaccccg acgaaccgcc cttcctgatt tccgacttcg gcacgcgccg
     6061 ccgctacaag ctcgcgtggc aggaacacgt catccgcacc ctgctcgaag ccgccccaag
     6121 catcgtgcgc ggcaccagca atgtctttct cgccaaaaaa ctcggcatca cccccatcgg
     6181 caccatggcg cacgaattcc tccaagcctt ccaggccctc gacgtacgcc tgcggaattt
     6241 ccaaaaggcc gcgctcgaaa gctgggtgca cgaataccgg ggcgatttgg gcgttgccct
     6301 gaccgacgtg gtcggtatgg atgccttcct gcgcgatttc gacctctatt tcgccaaact
     6361 tttcgacggg ctgcgccacg acagcggcga cccttacgtt tggggcgaca aagcctacgc
     6421 ccactatcaa aagctcaaaa tcgacagccg caccaaaatg ctgaccttct ccgacgggct
     6481 ggacatcgaa cgctcttggg cattacacca atatttcaaa gaccgcttca aaaccggctt
     6541 cggcatcggc accaacctca ccaacgatat ggggcatacg cctttgaata tcgtgttgaa
     6601 actggtcgaa tgcaacgggc agtccgtcgc caagctgtcc gactctccgg gcaaaaccat
     6661 gaccaacaac agcaccttcc tcgcctacct gcgccaagtg ttcgacgtac ccgaacccga
     6721 aacgccgtaa accggcagaa aaagcgcaca attcctgttt ctgccgcata aaatctttta
     6781 aaataccgcc tgatttgaat ttaaccgaaa gaccgaactt catgaaccta catcaaaccg
     6841 tcgaacgcga agccgccgcc gcctttaccg ccgcaggcat cgccgacagt cccgttgttt
     6901 tgcagccgac caaaaatgcc gaacacggcg atttccaaat caacggcgtg atgggtgcgg
     6961 cgaaaaaagc caaacaaaac ccgcgcgaac tggcgcaaaa agtcgccgac gcattggcag
     7021 gcaacgccgt catcgaaagc gcggaagtcg ccggtccggg ctttatcaac ctgcgcctgc
     7081 gccccgaatt tctcgcgcaa aacattcaga cggccttgaa cgacgcgcgt ttcggcgtgg
     7141 caaaaaccga caaaccgcaa accgtcgtta tcgactattc ctcgcccaat ctggcaaaag
     7201 aaatgcacgt cggccatctg cgttccagca tcatcggcga cagcatttcg cgcgtgtcag
     7261 aatttatggg caataccgtt atccgtcaaa accacgtcgg cgactggggt acgcagtttg
     7321 gcatgttggt cgcttatttg gtcgagcagc aaaaagacaa tgccgcattc gagctggcgg
     7381 atttggagca gttttaccgc gccgccaaag tgcgctttga cgaagacccc gcctttgccg
     7441 acaccgcgcg cgaatacgtt gtgaagctgc aaggcggcga tgaaaccgtt ttggcattgt
     7501 ggaaacagtt tgtcgatatt tcgctctcgc acgcccaagc cgtttacgac acgctgggct
     7561 tgaagctgcg ccccgaagac gtggcgggcg aatcgaaata caacgacgat ttgcagcccg
     7621 tagtcgatga tttggttcaa aaaggtctgg cagtcgaaga cgacggcgca aaagtcgtgt
     7681 tcttggacga gtttaaaaac aaagagggcg aacctgccgc atttatcgtg caaaaacaag
     7741 gcggcggctt cctttatgct tccaccgact tggcgtgttt acgctaccgt gtcggcacgc
     7801 ttcatgccga ccgcctgctg tacgtcgtcg accaccgcca agccctgcac tttgagcaac
     7861 tctttaccac ttcacgcaaa gcaggctatc tgccggaaaa cgtcggcgcg gcatttgtcg
     7921 gcttcggcac gatgatgggc aaagacggca aaccgttcaa aacacgcagc ggcgacactg
     7981 taaaactggt cgatctgctg accgaagccg tcgaacgcgc caccgctttg gtgaaagaga
     8041 aaaatcccga attgggcgcg gacgaagccg ccaaaatcgg caaaaccgtc ggcatcggcg
     8101 cggtcaaata cgccgacttg agcaaaaacc gcaccagcga ttatgtgttc gactgggacg
     8161 ctatgctctc gtttgaaggc aacaccgccc cctatctgca atacgcctac acccgcgtgc
     8221 aaagcgtgtt ccgcaaaaca ggcgaatggg atgcggacgc gccaaccgtt ttgaccgaac
     8281 cgctggaaaa acagcttgcc gccgagctgc tgaaatttga agacgtactg caaagcgtgg
     8341 cggacacggc gtatccgcac tacctcgccg cctacctcta tcaaattgcg accctgttca
     8401 gccgcttcta cgaagcctgt ccgatactca aagccgaagg cgcaagccgc aacagccgcc
     8461 tgcaactggc aaaactcacc ggcgacacgc tgaaacaagg cttggatttg ctgggcatcg
     8521 atgtgttgga cgtaatgtaa aaccgcaccg cccgattgcg gacaacagcc tcgccatcct
     8581 tatccgaatc tgaaaaaagc ggcgcgatac accgtatccg ccgcccctcc caaaatgcga
     8641 aacaaacaaa cgccaagcaa gcaaccaagc aagcaagcaa gcaagcaagc aagcaaaaaa
     8701 ttataacccc cttcctgccg acgcacgcac tttccgcgcg gcgcattccc ctttttccgc
     8761 ccctcaaacc cgccttttct tcaggcaggg tttcagcccg ccccctttcc ctgttttcct
     8821 ttccccgaca cgcgcgcgcg acccctgccg catcgtgccg cactttcgcg cccggacggc
     8881 atcgttccgc catccggttc tctgtttcaa atacccctgt ttcagaaaga aattctagat
     8941 gcttcaacac acaggacgac atataaagcg tcgccctata tgttgccctg atttggaagg
     9001 ggttacgcct cccaaataaa gtctgatcct gccgccccga aggacagatg tccgagtggc
     9061 gaagtttcaa ccgaaaagga aatacgatga atattcacac cctgctctcc aaacaatgga
     9121 cgctgccgcc attcctgccg aaacggctgc tgctgtccct gctgatactg cttgccccca
     9181 atgcggtgtt ttgggttttg gcactgctga ccgccaccgc ccgcccgatt gtcaatttgg
     9241 actaccttcc cgccgcgctg ctgatcgccc tgccttggcg tttcgtcaaa attgtcggcg
     9301 tattggcgtt ttggctggcg gttttgtttg acgggctgat gatggtgatc cagcttttcc
     9361 cttttatgga cctcatcggc gccatcaacc tcgtcccctt catcctgacc gcccccgccc
     9421 cttatcagat aatgaccggg ctgttgctgc tgtatatgct ggcgatgccg tttgtgttgc
     9481 agaaagccgc cgccaaaacc gacttccggc acattgccgt ctgcgccgcc gtcgtggtgg
     9541 cagccggcta tttcaccggc catttgagtt actacgaccg ggggcggatg gccaatatct
     9601 tcggcgcaaa caacttctat tacgccaaaa gtcaggcgat gctctacacc gtcagccaga
     9661 atgccgactt tattaccgcc ggcctggtcg atcccgtctt cctccccttg ggcaatcagc
     9721 agcgtgccgc cacgcatctg aacgagccga aatctcaaaa aatcctcttt atcgtcgccg
     9781 aatcttgggg gctgccggcc aatcccgagc ttcaaaacgc cacttttgcc aaactgctgg
     9841 cgcaaaaaga ccgtttttcg gtttgggaaa gcggcagttt tccctttatc ggcgcgacgg
     9901 tcgaaggcaa aatgcgcgaa ctgtgcgcct acggcggttt gcgcgggttt gcactgcgcc
     9961 gcgcgcccga cgaaaaattt gcccgctgcc tccccaaccg tttgaaacaa gaaggttacg
    10021 ccacctttgc gatgcacggc gcgggcagtt cgctttacga ccgcttcagc tggtatccga
    10081 gggcgggctt tcaagaaatc aaaaccgccg aaaacctgat cggtaaaaaa acctgcgcca
    10141 ttttcggcgg cgtgtgcgac agcgagctgt tcggcgaagt gtcggcattt ttcaaaaaac
    10201 acagcaaagg attgttttac tggatgacgc tgaccagcca cgccgactat cccgaatccg
    10261 acattttcaa ccacaggctc aaatgcaccg aatacggcct gcccgccgaa accgacctct
    10321 gccgcaactt cagcctgcac acccaatttt tcgaccaact ggcggattta atccaacgcc
    10381 ccgaaatgaa aggcacggaa gtcatcatcg tcggcgacca tccgccgccc gtcggcaacc
    10441 tcaatgaaac cttccgctat ctcaaacagg ggcacgtcgc ctggctgcac ttcaaaatca
    10501 aataacaaca atgccgtctg aacgcaccaa cagccttcag acggcatttt gcagacagac
    10561 cgacccctca agcccacttt ttcatcattt ccgataaatt
//
LOCUS       DAWKOX010000062        10572 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.062, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000062 DAWKOX010000000
VERSION     DAWKOX010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10572
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.062"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..247)
                     /locus_tag="WJK78_001093"
     CDS             complement(<1..247)
                     /locus_tag="WJK78_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598030.1"
                     /translation="MTVGNPAGAPFPHKTAFHRQPQTRHQRQDSNDKERMMKIKALMI
                     AAALLAAADVHAAPQKAKTASAKAAKAAKAAKAAKAAK"
     gene            complement(244..2652)
                     /locus_tag="WJK78_001094"
     CDS             complement(244..2652)
                     /locus_tag="WJK78_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ7598031.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            2722..3726
                     /locus_tag="WJK78_001095"
     CDS             2722..3726
                     /locus_tag="WJK78_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ7598032.1"
                     /translation="MQRQIKLKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGGS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            complement(3783..4481)
                     /locus_tag="WJK78_001096"
     CDS             complement(3783..4481)
                     /locus_tag="WJK78_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ7598033.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMHTID
                     LLADKVREEQKAAQ"
     gene            4699..6237
                     /gene="murJ"
                     /locus_tag="WJK78_001097"
     CDS             4699..6237
                     /gene="murJ"
                     /locus_tag="WJK78_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ7598034.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFGIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LSFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLYAAQIWLPFDWAHAGGMQKAARLFILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            6370..7326
                     /locus_tag="WJK78_001098"
     CDS             6370..7326
                     /locus_tag="WJK78_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HEZ7598035.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRSRGWHGAVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGEQGENALPQAAA
                     VISAPVDAEAAGNRFDSGITRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHVGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            7377..8159
                     /gene="trpC"
                     /locus_tag="WJK78_001099"
     CDS             7377..8159
                     /gene="trpC"
                     /locus_tag="WJK78_001099"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ7598036.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVPLEHIRALAAEAAPVRSFIGS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEREQLERFEAVA
                     HELGMTVLLELHDESELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIEAEVGKLF"
     gene            8224..10524
                     /gene="recQ"
                     /locus_tag="WJK78_001100"
     CDS             8224..10524
                     /gene="recQ"
                     /locus_tag="WJK78_001100"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ7598037.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMCEGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSGTSADGAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGI
                     LAERYPNVPRIALTATADAATRADIKHYLHLDNAPEFVSSFDRPNIYYQVIEKNNGKK
                     QLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEESEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEVIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNTAGFSRDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKRKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPKGLAELA
                     AVYGVGEEKTARYGAAVLAVLGQNAV"
BASE COUNT         2141 a         2996 c         3052 g         2383 t
ORIGIN      
        1 ctttggcagc tttggcagct ttggcagctt tggcagcttt ggcagctttg gcggatgcgg
       61 tttttgcctt ttgcggtgcg gcgtggacat cggctgctgc cagcaatgcg gcggcaatca
      121 tcagggcttt gattttcatc attctttcct tatcgtttga atcctgcctt tgatggcggg
      181 tttggggttg tcggtggaat gccgtcttgt gcgggaacgg tgctcctgcc gggtttccga
      241 cggtcagggc cgtttgttgc gtccggcgga aagagagtgg gcggggatgt agccgggaac
      301 ggcgacatcc atcctgtctg cggggtttct gccgacactg ctgaggtctt tcaactgaag
      361 tgagaaaaag acagcgtttt tgtaggtgtt ttcgccggta acgtagcgtt gggcgtacac
      421 gcccgcgccc cagcagccgc aactgctttt gtattccgca cccgccagca cctctatcgg
      481 ttttttggct tcaaaaccgt agttgtaacg gacgacggcc gacaggttgc gcgtcagcgg
      541 ccattgtgcg gacaggtcga gctggctgag tttgtcgtaa aaataggaac cgtcggactt
      601 caggtagatt ttttcgttgc gcccgtattt gtagcgggcg ttcagcactt tgccctgtgc
      661 gggacggtag cttgcaccga cggcgtagtt ctcggcgcgt ttgtcgtttt ggttgtagtg
      721 gatgctgctg tcgaggatga agcggctgcc gatgctgccg gaggcaaatg ccacccagtc
      781 ggaacggttg cgcggttttt tgccgacgct gccgtcaagc atcaccgcat catccttgaa
      841 atagaatttc tgaccgatgc cggcgcggaa acgctcttcc cccgtcgcgc cgtccaaaat
      901 acggctttgc acggcggcgg aaaggctgtt tgcggtgtta atcctgtcgt tgccgtaata
      961 gaggttttcg cgaaagagct gcccgtagcc gaagctgctt tccgacgaat cgaaattggg
     1021 caggtcgttt tgggatttgg caggaatata gttgtagaac aggcgcggct cgagggtttg
     1081 caggactccg ccgccgaaca tccgcgtatt ccgctcaaaa gttgcgccgc tgtcgatgtt
     1141 gacaatgggc agagtgcggc tgacgcgtcg ggcttcttgg ctgccgaagc ggttgaggct
     1201 gtaataggtg gcgtgcagtc cgagtttggg acggacgtaa ccccagctgt tgctgaaatc
     1261 ccatttgatg tcgggataga cgacgaggcg gctgccgtct tggcggctgt cgtggctgaa
     1321 gcgggtaaat tgtgcggaca cgccgatttg cgccctgccg gtgtttttgc gccaatcggc
     1381 ggaaaggcgc ggcatcaggg catacggttt gtctttgtag ccgctttggt ttgccagcgt
     1441 ctggtatttc agaaccgaaa ggccggcatt caggctgccg cccgccgccc tgccgccata
     1501 atccagccat acacggcggt tgaggttgac gttgccggcg atttctttgt tgccgtaaaa
     1561 gtcgcggtag tagccgctgt cggagacttg gttgaaatcg acacccgcct gaagcgtgtc
     1621 ggaaatgtcg tgccggtgct gccatttcgc ctgatagcgg ttattcctgc cgcttttttt
     1681 gtcgtgcggc agccaggtca ggtcggactg gccggcataa tccggccgca ggtagcgtac
     1741 ctgcccgtca aagaccgcgc cgcgttcgcc gatcacgccg ggcgcgaacg tggcatcgag
     1801 attgggggca aggttgaaat aatagggaac ggaaagggaa acgccgtccg aaccggcgga
     1861 cagtgaggga acaagcaggc cgcttttgcg gttgccgtca agcgggaagt ccgcccaagg
     1921 cgtatagaaa aggggaacgc cgccgaacac gaaggcggcg tgtttggcaa cgcctatgcc
     1981 tttttcccga tcggcttcga cggaagcggc cttgacatac cagccggcat cgccggcgga
     2041 acaggtgttg aattgggttt ccgtcagttt gtaatgccct tcgcccaaca tttcggcggt
     2101 gcggctgacg ctttgcagcc gccgtccgcc ttgttcggtt tccatacgga cgttgtgcgc
     2161 ttccccggtc tgctgctcga gattgtaggt cagggtttcg ccccgaatca gcgtaccgtc
     2221 ctgttggagg gcgaaccggt cgcctgcggt aacggtgtcg cccgactggt cgtaatccgc
     2281 ccaatcggta ttgagggtcg tccggttgcg ttcgacgacg acgttgcctt cggcacgcac
     2341 ctgcacctgc gactgtcctt ccaccttgtc ggcaacaatg cgcgtatagt cttcggggat
     2401 ggatgcttcg ccgctgcctc ggacggcggc ttcggttctc tcggggctgc cgctttcgtt
     2461 actgcaaaac aggcaggtcg aaccgaggct caggctggta ggctgtatgg gttcggacac
     2521 gctccgaacg cttcctccgg cggtcggatt gtccgtttcc tccgccgcaa cggcatcggc
     2581 ggcggcgcaa tgcgtgccga agcagaggcc caatgccagc accagtggtt tgagtgaaaa
     2641 taaacgagcc aaaatcgccc ctcaagtcgg tttgccagtt agaatagcgt ttattgtaac
     2701 ctgaaatgct ttagtactgt tatgcaacga caaatcaaac tgaaaaattg gcttcagacc
     2761 gtttatcccg aacgggactt cgatctgact tttgcggcgg cggatgctga tttccgccgc
     2821 tatttccgtg caacgttttc agacggcggc agcgtcgtct gtatggatgc gccgcccgac
     2881 aagatgagtg tcgcgcctta tttgaaggtg cagaaactgt ttgatatggt caatgtgccg
     2941 caggtattgc acgcggacac ggatttgggg tttgtggtat tgaacgactt gggcaatacg
     3001 acgtttttga ccgcgatgct tcaggaacag ggcgaaacgg cgcacaaagc cctgcttttg
     3061 gaggccatcg gcgagttggt cgaattgcag aaggcaagcc gtgaaggggt tttgcccgaa
     3121 tatgaccgtg aaacgatgct gcgcgaaatc aacctgttcc cggaatggtt tgtcgcaaaa
     3181 gaattggggc gcgaattaac attcaaacaa cgccaacttt ggcagcaaac cgtcgatacg
     3241 ctgctgccgc ccctgttggc gcagcccaaa gtctatgtgc accgcgactt tatcgtccgc
     3301 aacctgatgc tgacgcgcgg caggccgggc gttttagact tccaagacgc gctttacggc
     3361 ccgatttcct acgatttggt gtcgctgttg cgcgatgcct ttatcgaatg ggaagaagaa
     3421 tttgtcttgg acttggttat ccgctactgg gaaaaggcgc gggctgccgg cttgcccgtc
     3481 cccgaagcgt ttgacgagtt ttaccgctgg ttcgaatgga tgggcgtgca gcggcacttg
     3541 aaggttgcag gcatcttcgc acgcctgtac taccgcgacg gcaaagacaa ataccgtccg
     3601 gaaatcccgc gtttcttaaa ctatctgcgc cgcgtatcgc gccgttatgc cgaactcgcc
     3661 ccgctctacg cgctcttggt cgaactggtc ggcgatgaag aactggaaac gggctttacg
     3721 ttttaaaccc aatcaaaatg ccgtctgaaa accaagtttc agacggcatt tttcaaacgg
     3781 gcttactgcg cggctttttg ttcttcgcgt actttgtccg ccaaaaggtc gatggtgtgc
     3841 ataccggact cccagtcggc aaattcgact ttatatttgc cgccgacgat aaccgtgggc
     3901 gtaccgtcga tttggaaggt ttcggtcagc tcctgcattt tgtcggcgcg cgcctggctt
     3961 tcgggggact cgtaggcggc aaggactttt ttgccgtcaa aggcggtttg ttcgcccagc
     4021 cattttttga ggacttccgg ctcttgcagc ttgatttttt ggttgaccat cgcatcgaaa
     4081 atatggctgt tcgccacatc tttgctgtcg gcggcagcca tatcgacggc ggcggcgagg
     4141 cgtgcgagcg tcagcatttc tttctgccag acgacgtgtt cggtacgcag gtacatatcg
     4201 tctttaaaag acttggcgtg tttgcttaaa acaggttcga ggtgggcgca gtgcggacag
     4261 aaatagccga aaaattcaag gacttcgact ttgcctgcct gctgttgggg aatcgggttg
     4321 gcaaggacgg tatagttttg cccttcgacc agccctgccg gggcggcggc tgccgaagcg
     4381 gcaggcgcgc tgtcggcggg gacgctggtt tggactttgc tgtcgcacgc ggcaagggcg
     4441 aacagggcgg caacgccgag ggcgaggtgt ctggatttca tacggctctc cgtgatgttg
     4501 gaaacagatg ttggaaatca atcggaatcc ggctatttta ttgcatttcc gcgtgttgat
     4561 acagtttgcc gccggaaaag gaagctttcg tttcgggaaa ccgcttcaga cggcatcaaa
     4621 cccgatgccg tctgaagcgg tttctgtcgt acaatacgcg ccgttgcccc aaacgggtac
     4681 gactgttgag gaacaatgat gaatatgctg ggagctttgg caaaagtcgg cagcctgacg
     4741 atggtgtcgc gcgttttggg atttgtgcgc gatacggtca ttgcgcgcgc attcggcgcg
     4801 ggcatggcga cggatgcgtt ttttgtcgcg ttcaaactgc ccaacctgct tcgccgcgtg
     4861 tttgcggagg gggcgtttgc ccaagcgttt gtgccgattt tggcggaata taaggaaacg
     4921 cgttctaaag aggcgacgga ggcttttatc cgccatgtgg cggggatgct gtcgtttgtg
     4981 ctggtcatcg ttaccgcgct gggcatactt gctgcgcctt gggtgattta tgtttccgca
     5041 cccggttttg ccaaagatgc cgacaaattt cagctctcca tcgatttgct gcggattacg
     5101 tttccttata tcttattgat ttcactttcc tcttttgtcg gctcggtact caattcttat
     5161 cataagttcg gcattccggc gtttacgccc acgttcctga acgtgtcgtt tatcgtattc
     5221 gcgctgtttt tcgtgccgta tttcgatcct cccgttaccg cgctggcttg ggcggtcttt
     5281 gtcggcggca ttttgcagct cggcttccaa ctgccctggc tggcgaaact gggttttttg
     5341 aaactgccca aactgagttt caaagatgcg gcggtcaacc gcgtgatgaa acagatggcg
     5401 cctgcgattt tgggcgtgag cgtggcgcag atttctttgg tgatcaacac gattttcgcg
     5461 tcttatctgc aatcgggcag cgtttcatgg atgtattacg ccgaccgcat gatggaactg
     5521 cccggcggcg tgctgggggc ggcactcggt acgattttgc tgccgacttt gtccaaacac
     5581 tcggcaaacc aagatacgga acagttttcc gccctgctcg actggggttt gcgcctgtgt
     5641 atgctgctga cgctgccggc ggcggtcgga ctggcggtgt tgtcgttccc gctggtggcg
     5701 acgctgttta tgtaccgcga attcacgctg tttgacgcgc agatgacgca acacgcgctg
     5761 attgcctatt ctttcggttt aatcggtttg atcatgatta aagtgttggc acccggcttc
     5821 tatgcgcggc aaaacatcaa aacgcccgtc aaaatcgcca tcttcacgct catctgcacg
     5881 cagttgatga accttgcctt tatcggccca ctgaaacacg tcggactttc gcttgccatc
     5941 ggtctgggcg cgtgtatcaa tgccggattg ttgttttacc tgttgcgcag acacggtatt
     6001 taccaacctg gcaagggttg ggcggcgttc ttagcaaaaa tgctgctctc gctcgccgtg
     6061 atgggaggcg gcctgtatgc cgcccaaatc tggctgccgt tcgactgggc acacgccggt
     6121 ggaatgcaaa aggccgcccg gctcttcatc ctgattgccg tcggcggcgg actgtatttc
     6181 gcatctctgg cggctttggg cttccgtccg cgccatttca aacgggtgga aagctgaccg
     6241 atgccgatat cctttttcgg aaaacgcttt ttccgcgcct atattcgggc gcgcatcccc
     6301 cgagtccgca ccagccggac gggctgccgc atcatcaatg ccgtctgaaa acagaaaaac
     6361 cgatacctta tgattttgac accgccggac acaccgtttt tcctccgcaa cggcaatgcc
     6421 gatacgattg ccgccaaatt cctgcaacgc cccgcacccg cataccgccg cgagctgctt
     6481 cccgacagca cgggtaaaac caaagtcgcc tacgactttt cagacggcat ttcgcccgat
     6541 gcgccgctgg tcgtgctgtt tcacggttta gaaggaagca gccgcagcca ttacgcggtc
     6601 gaactgatgc tcgcggtacg cagccgcggt tggcacggcg cagtcgtcca tttccgcagc
     6661 tgcggcggca ttgccaacac cgctccggtg ttctaccact tgggcgatac cgccgaaatc
     6721 gcctttactt tggacacgct tgccgcgcgt taccgtgaaa tatacgccgt cggcgtatcg
     6781 ctgggcggca acgcgctggc aaaatatttg ggcgaacagg gcgaaaacgc gctgccgcaa
     6841 gccgccgccg tcatctccgc acccgtcgat gcagaggcgg caggcaaccg cttcgacagc
     6901 ggcatcacac ggctgctcta cacgcgctac ttcctccgca cactgatacc caaagcacgg
     6961 tcgctccaag gttttcagac ggcatttgcc gcagggtgca aaacactggg cgagtttgac
     7021 gaccgcttca ccgcaccgct gcacggcttt gccgaccggc acgactacta ccgccaaact
     7081 tcctgcaaac cgctgctcaa acacgttgcc aaaccgctgc tcctgctcaa tgccgccaac
     7141 gaccccttcc tgccgcccga agcgctgccg acaccggacg aagtgtccga agccgttacc
     7201 ctgttccagc cggcacacgg tggtcatgtc ggctttgtca gcagtaccgg cggcaggctg
     7261 cacctgcaat ggctgccgca gaccgtcctg tcctatttcg acagcttccg cacaaacagg
     7321 cgttaacggt ttgatgctaa tattccccct ttccccggac gaatacggaa cacaatatga
     7381 ccgacatcct caataaaatc cttaccgcca aggcacagga agttgccgcc caaaaagccg
     7441 ccgttcccct cgaacacatc cgcgcacttg ccgcagaagc cgcgcccgtc cgaagcttca
     7501 tcggttcgat acgcggcaaa caccgcctaa acctgcccgc cgtcattgcc gaaatcaaaa
     7561 aggcaagccc gagcaaaggc ctgatccgtc cggacttccg accggccgag attgcacgcg
     7621 cctatgaaaa cgccggagcg gcgtgtttgt ccgtactgac cgacgaaccc tatttccaag
     7681 gttcgcccga atacctcaaa caggcgcgcg aagccgtatc gctgcccgtc ttgcgtaaag
     7741 acttcatcat cgacgaatat caggtttatc aggcgcgcgc ctggggggcg gatgccgtcc
     7801 tgctgattgc cgccgcactg gaacgggaac aattggaacg ctttgaagcg gtggcgcacg
     7861 aattgggtat gaccgtcctg ctcgagctgc acgatgaaag cgaattggaa aaatgccgta
     7921 acctgaccac gccgttgtgg ggcgtaaaca accgcaacct gaggactttt gaagtctccc
     7981 tcgaccaaac cctgtcgctg ctgcccgcac tggaaggcaa aaccgtcgtt accgaaagcg
     8041 gcattacggg taaggcggat gtggaattta tgcgggcgcg cggcgtgcac accttcctga
     8101 tcggcgaaac gttcatgcgt gccgacgata ttgaggcgga agtgggcaaa ctcttctaaa
     8161 tcccgatttc agacggcata ttgccgccaa ccgaccaaca cccttaccga gcacggaacc
     8221 atcatgcacc gaccgaccgc caaacagatt ctgcacgaag tatttggtta tcccgaattt
     8281 cgcggcaggc aggaggctgt catcaatact ttggcaggcg gcgggagttt gacggtgctg
     8341 atgccgacgg gcggcggcaa gtctttgtgt taccagattc ccgcgctgat gtgcgaaggc
     8401 gtggcggttg tcgtatcgcc gctgattgcg ttgatgaacg accaagtggc aaacctgcac
     8461 gccgccggca tcgaagcggc ggcagtcaac agcggcacat cggcagatgg ggcgcgcgag
     8521 attgccgaca agcttgccca aggccgtctg aaactgcttt atgtcgcacc ggaacgccta
     8581 gttaccgacc gctttttgcg ttttctcgac caacaaaccg tcagcctgtt cgccattgac
     8641 gaagcgcact gcgtcagcca gtggggacac gatttccgcc ccgaatacca acagctcggc
     8701 atccttgccg aacgctatcc gaacgtcccg cgcatcgccc tgaccgctac cgccgatgcc
     8761 gccacgcgcg ccgacatcaa gcattatctg cacttggaca atgcgcccga atttgtctcc
     8821 agcttcgacc gtccgaatat ttattatcag gttatcgaaa aaaacaacgg caaaaaacaa
     8881 ttgctggatt tcatccgcaa agaaatgacg gggcaaagcg gcattgtgta ttgcctaagc
     8941 cgcaaaaagg ttgaagatgt ggcgcagttt ttgcgtgaaa acggattaaa cgcgattccg
     9001 tatcatgctg gtttgagcat ggacgtgcgc gaggaaaacc aacgccgctt tacgcatgaa
     9061 gacaatatta tcgtggtggc gaccgtggcg ttcggcatgg gcatagacaa acccgacgtg
     9121 cgctttgtcg cccatctcga tatgccccag agtgtcgaac atttctatca ggaatcgggg
     9181 cgtgccggcc gggacgggct gcctgccgcg agctggctgt gttacggttt gaacgattgg
     9241 gtgttgctgc gcgaacggat tgccgaaggc aacagcgacg aggtgcaaaa gcaaatcgaa
     9301 atgcaaaaac tcgatgccat gctttccgtc tgcgaaaccg ccgcctgccg ccgcgtactg
     9361 ctgctcaaac atttcggcga agaatccgaa ccctgcggcc attgcgacaa ctgcctgcat
     9421 ccgcccgtac ggtttgacgg cacggtgttg gtgcaaaaat tactcagctg cgtgtaccgc
     9481 gccggacaac gttttgccgc cggttacatc accaaccttt tgcgcggcaa aagcgacgat
     9541 tggatacgcg gcaaccggca cgaacaactg tccaccttcg gcatcggtac ggagttgtcc
     9601 gacaaagaat ggcgcagcgt catccgccag tgtatcagcc tcggctacct caccgtcaac
     9661 attacccgat atcaggcatt gcaactgacc gaagccgcca aaaaagtcct caaaggcgaa
     9721 accgaagtga tgctgcgtcc gctcaagcgc gacaagcccg ccgcccgcac cctcaaagac
     9781 aactggctgc gtaccgaacg cgaagaacgc ctgtggcagg cattgcgcgt ttggcgtatg
     9841 aaacaggcag aagccgaagt catccccgcc tatatgattt tcggcgacaa aaccctgcgc
     9901 gaccttgtcg aaaaaatgcc gcaagacctc aacggactgc acgacatcta cggtttgggc
     9961 gaagccaaaa tcgaccgttt cggacacggc atcctcgaag tctgccgcaa caccgccggc
    10021 ttcagtcgcg acgcggtcat ccgtccgcaa accgaacgcg aacaacaact gcgtcaaaaa
    10081 ctcgaggcct ggcggtatga acaggcaagg gcggaaaact gcgccctgca tgccgtcctc
    10141 tccgacgaaa gccttgccga tatgcttgcc gccacgcccg aaaccgaaac cgacctcgaa
    10201 ggcgtacacg gcttgggcag cgtacgcgcc gccaaatacg gacgggacat cctcgccgtc
    10261 tgccgtccgt tttcagacgg catcgatgaa gccgccaaac gcaaacgccg cctgatgcgc
    10321 gccctgatcc aatggtgcgg cgaaacggca aaacacgaac agtccgaacc ctaccgcatt
    10381 ctcagcaaag ccgccctgcg cgccattgcc gccaaacagc cgaagggttt ggcggagctt
    10441 gccgccgtat acggcgtggg cgaagaaaaa accgcacgtt acggtgcggc ggtgttggcg
    10501 gtgttgggac aaaatgccgt ctgaaaaccg ttaccaagtt tcagacggca ttgcctctat
    10561 ttaaaaattc ct
//
LOCUS       DAWKOX010000063        10536 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.063, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000063 DAWKOX010000000
VERSION     DAWKOX010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10536
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.063"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..2314
                     /locus_tag="WJK78_001101"
     CDS             <1..2314
                     /locus_tag="WJK78_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ7598038.1"
                     /translation="EIKFTSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNA
                     QTKGKKQGELDLEVELKANAGDAEFERKGWEHMVLELLLNKNGNPGQNVLLEFTATPP
                     EKADVQQKYADKIITKFGLKEFLQKGYTKEINLVSSTLSKKERVLHALLFAWYRHQIA
                     LKYGIANFKPVMLFRSKTVDESKADYLAFLNWVENVQADDFSFLKTFSMSLNDSDNAN
                     EQGKTRTEQALKFMQENGFEFAHLANWIKQNYQKHNIIITNSETNKSKTEKTDSETEK
                     LLNNLEAVDNPIRAIFTVGRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSCKTANTTVS
                     EKQLIGRGVRYFPFSFEDKQPNKRKFDNDMQHELRILEELFYYTHDEQSRYITELKNE
                     LRKDGYLPEKDDDKVLATFKLKSEFADNENFKNLLIWANKKIPNPNAKSNNADSLKAN
                     PQTLSFQIHGNQLLQETQFTADKNDEKVKQLGIQNNFSQTIKMSEMERHIFNKALHIK
                     GKNSQSLFHFNRLQSKLNIQNRNELQNNLLKDWQIEFLGLEQDKQVRPDDKLAGCLKI
                     LEMVEKHLNESDKPFIGTKEFTPKTLWEIFGTPKQKWVKKDDIKTAIAMQNDWYVMDN
                     FAGTGLEEALIQFISARLGDLKSQYDIHLIRNEEVFKLNNFANGEGFMPDFILLLKDK
                     QKSSSNGVNDFLHYQIFIEPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRL
                     IGLPFFTDHQKNGQFTESFPLGAASLEKMK"
     gene            complement(2458..3630)
                     /locus_tag="WJK78_001102"
     CDS             complement(2458..3630)
                     /locus_tag="WJK78_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ7598039.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            3921..4367
                     /gene="iscR"
                     /locus_tag="WJK78_001103"
     CDS             3921..4367
                     /gene="iscR"
                     /locus_tag="WJK78_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ7598040.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            4396..5610
                     /locus_tag="WJK78_001104"
     CDS             4396..5610
                     /locus_tag="WJK78_001104"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ7598041.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKVDLLSMSGHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYVNGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            5871..6257
                     /gene="iscU"
                     /locus_tag="WJK78_001105"
     CDS             5871..6257
                     /gene="iscU"
                     /locus_tag="WJK78_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ7598042.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            6344..6664
                     /gene="iscA"
                     /locus_tag="WJK78_001106"
     CDS             6344..6664
                     /gene="iscA"
                     /locus_tag="WJK78_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ7598043.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(6624..6845)
                     /locus_tag="WJK78_001107"
     CDS             complement(6624..6845)
                     /locus_tag="WJK78_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ7598044.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKHGSFRRSRRSL"
     gene            6927..7427
                     /gene="hscB"
                     /locus_tag="WJK78_001108"
     CDS             6927..7427
                     /gene="hscB"
                     /locus_tag="WJK78_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ7598045.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            7525..10275
                     /gene="gyrA"
                     /locus_tag="WJK78_001109"
     CDS             7525..10275
                     /gene="gyrA"
                     /locus_tag="WJK78_001109"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ7598046.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            10432..10536
                     /locus_tag="WJK78_001110"
                     /pseudo
     CDS             10432..10536
                     /locus_tag="WJK78_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         3113 a         2759 c         2371 g         2293 t
ORIGIN      
        1 tgaaattaaa tttaccagta ttcaaaaact gtataacgat atccacaccg aacgggaaaa
       61 ccaaaccaca ttggcagatt tgcacgaatt gaaccttgtg atgctgggcg atgaagcgca
      121 ccatttaaac gcacaaacca aaggcaaaaa acaaggcgag ttggatttgg aagtggaatt
      181 aaaagccaat gcaggcgatg ccgaatttga acgcaaaggc tgggagcata tggttttgga
      241 attgttgctc aataaaaatg gcaatcccgg ccaaaatgtg ctgttggaat ttaccgccac
      301 gccacctgaa aaagctgacg tgcaacaaaa atacgctgat aaaatcatca caaaatttgg
      361 tttaaaagaa tttttgcaaa aaggttatac caaagaaatc aatttggtat ccagtacact
      421 gagcaagaaa gagcgggtgt tgcacgcttt attgtttgct tggtatcgcc atcaaatcgc
      481 tttgaaatat ggcattgcca atttcaagcc tgtgatgttg tttagaagta agacggttga
      541 tgaatcaaaa gcggattatt tggcattttt aaattgggta gaaaatgtgc aagcagatga
      601 tttttcgttt ttaaagacat tttcaatgag cttaaacgat agcgataacg ccaacgaaca
      661 aggcaaaacc cgcaccgaac aagccctaaa atttatgcag gaaaatggct ttgagtttgc
      721 acatttagca aattggataa aacaaaatta tcaaaaacac aatatcatta ttaccaactc
      781 cgaaaccaac aaaagcaaaa ccgaaaaaac cgacagcgaa acggaaaaat tgctaaacaa
      841 tctggaagcg gttgataatc cgattcgtgc tatttttacg gtgggtagat taaccgaagg
      901 ttgggacgtt ttaaatttgt ttgatattgt gcgtttgtat gaagggcaaa acggcggcgg
      961 ttcaaataaa aaatcatgca aaacggcaaa tacaacggta tcagaaaaac agttgattgg
     1021 tcgaggcgtg cgttattttc cattttcgtt tgaagataaa cagccgaata agcgtaaatt
     1081 tgacaacgac atgcaacacg aattgcgtat tttggaagaa ttgttttatt acacgcacga
     1141 tgagcaatcc cgctatatta cagaactgaa aaacgagtta cgaaaagacg gttatttgcc
     1201 tgaaaaagac gatgataagg tattggcaac atttaaactc aaatctgaat ttgcagataa
     1261 tgaaaatttt aaaaacttat tgatttgggc gaataaaaaa atccccaatc ccaatgctaa
     1321 aagtaataat gcagacagcc taaaagccaa tccgcaaaca ctttcattcc aaattcacgg
     1381 caatcaactg ttgcaggaaa cgcaatttac agccgataaa aatgatgaaa aggtcaagca
     1441 acttggcata caaaataatt tttctcaaac cataaaaatg agtgaaatgg aacggcacat
     1501 cttcaataaa gcattacata tcaaagggaa aaatagtcaa tctttattcc atttcaaccg
     1561 tttgcaaagc aaactcaaca ttcaaaatcg caatgaattg caaaataact tgttgaaaga
     1621 ctggcaaatt gaatttttag gattagagca agataaacag gttcgcccgg atgataaact
     1681 tgcaggctgc ctgaaaatct tggaaatggt tgaaaagcat ttgaatgaaa gtgataagcc
     1741 atttatcggt acaaaagaat ttacgcctaa aacattatgg gaaattttcg gcacgccaaa
     1801 acaaaaatgg gtcaaaaaag atgatataaa aactgctatt gccatgcaaa atgattggta
     1861 tgtgatggat aattttgccg gaacgggttt ggaagaagcg ttaattcaat ttatttcagc
     1921 gcgtttgggc gatttgaaat ctcaatatga cattcattta atccgtaacg aagaagtgtt
     1981 taaattgaat aactttgcca atggcgaagg atttatgccc gactttattt tattgctgaa
     2041 agataaacaa aaatcttctt ccaatggcgt gaatgacttt ttgcattacc aaattttcat
     2101 tgagcccaaa ggtgagcatt tagtggaaac tgatggatgg aaagaagaat ttttagaagc
     2161 catcacagtg gaatatggga tggataagat cctgcaaaaa gatacaccgc attatcgttt
     2221 gatcggttta ccgtttttta ctgatcatca gaaaaatgga caatttacgg agtcattccc
     2281 tttaggtgcg gcatcgcttg aaaaaatgaa gtagtgcatt gcaggcagcc ccgtttgaca
     2341 aaacttcctt tacaaaaggg cgttttgtca gatatttaat caacacatta ttaaaataca
     2401 gccaaatttt aatgccgtct gaaccctgtg ttcagacggc atcgtatttt tcagtatcta
     2461 aaccgtttcc ctaccccaat ccttacccct caaaatcgag gcatcgacat cttgaatatc
     2521 gcggtgtccc gtaaacgcca tagatatatc catttcttta tacaggattt ccagcgcacg
     2581 ggttacgcct tcttcgccat acgcacccaa gccatacaga aacgcccgac ctatcattgt
     2641 acctttcgca cccaaagccc acgccttcaa aatatcctga ccgctgcgga tgccgctgtc
     2701 catccaaact tcgatgtcgc tgccgactgc actaacgatg tcgggcaagg ctttgatggc
     2761 agacacggta tcgtcgagct gtcggccgcc gtggttggaa acaatcaatg cgtccgcgcc
     2821 gcttttcgct gctttttccg cgtcttcggg ttccataatg cctttgataa tcagcttgcc
     2881 gccccacaaa tctttaatgc gcgccacatc gtcccagctc aggcgcgggt cgaattgttc
     2941 ggaagtccat gaagacagcg aagacaaatc gccgacgttc ttcgcgtgtc cgacgatatt
     3001 gcggaacgtg cggcgttccg tgttcagcat tttcatgcac cattccggtt tggtcgccag
     3061 attgattaaa ttggcgatgg tcggtttcgg cggcgcggac aggccgtttt tgatgtcttt
     3121 gtggcgttga cccaaaacct gcaaatcggc ggtcaatacc aatgccgaac atttggcatc
     3181 cttcgcgcgc ttaatcaggt tttccataaa ctcgcggtcg cgcatcacat aaagctgaaa
     3241 ccaaaatggt gcggaagtgt tctcggcaac gtcttcaatc gagcagatag acatcgtgga
     3301 cagcgtaaac ggaatgccga acttctccgc cgcccgcgcc gccaaaattt caccgtcggc
     3361 gtgtgccata cccgtgaaac ccgtcggcgc aatcgccacc ggcattttca catcctgccc
     3421 gatcattttg gtttccaggc ttcggccttc catattgacc aatacctttt gtcggaagcg
     3481 gatgtctttg aaatccgaag tgttttcacg gtaggtagtt tctgtccacg aacccgaatc
     3541 gatgtaatcg taaaacatac gcggcatttt gcgcttggca acgcggcgca agtcttcgat
     3601 gcaggtcatt ttgctcaaat cacgtttcat ttgtcgcccc ctgaatacct gaataacttt
     3661 atatgaaatc gataatgtat atcaatattg attataaggc aaatcatttc aacatttgcc
     3721 gcatccgccg cagctcccta ctttaagcga cataaggttt aaaattcaaa aataacaaat
     3781 taaaatcaaa atattaaaaa tcaatcaatc tatcgattta aacagccaat cacacaatcc
     3841 gcccccatac ttgactgaaa cactcagata ttggacaatt ccacccacta ataaaaaaac
     3901 cgacatgggc aaccaccacc atgagactga ccaccaaagg gcgtttcgcc gttaccgcta
     3961 tgctggattt ggcgatgaac gcgcaaaccg gcgccgtcaa actcagtgcc atcagcgaac
     4021 gccaaaacat atccctctcc tatctcgagc aattgttcgg caaactccgc cgcgccggac
     4081 ttgttgaaag cctgcgcggg cccggcggcg gctacatcct cgccgcaccg gcggcacgca
     4141 tcaacatcgc ccaaatcatc gccgccgccg aagaccggct ggacgcaacc caatgcggca
     4201 gcaaagccaa ctgccaccac ggcgcgccct gcctgacgca cgatctttgg gagaatttaa
     4261 acaaaaccat caacgactac ctcggcagcg ttaccctgca aagcatcatc gaacagaaaa
     4321 acaacggcga cggcagccgc gtcgtccaat ttacacacat ccattaaata acacccgaaa
     4381 aagaaagagc aaaccatgac cgtcaaaacc cccgtttacc tcgactacgc cgccaccacc
     4441 cccgttgaca aacgcgttgc cgaaaaaatg attccctatc tgaccgaaac cttcggcaac
     4501 ccagcctcca acagccacag cttcggctgg gaagcagaag aagctgtaga aaaagcacgt
     4561 gcagacattg ccgccctgat taacgccgac tctaaagaaa tcgttttcac cagcggcgca
     4621 accgagtcca acaacctcgc tatcaaaggc gcggcgcact tctacaaatc taaaggtaat
     4681 cacctcatca ctgtaaaaac cgaacacaaa gccgtactcg acaccatgcg cgaactcgaa
     4741 cgccaaggtt acgaagtaac ttatctggac gtacaagaaa acggtttggt tgatttagac
     4801 gtactgaaag ccgccatccg cgaagacacc atcctcgttt ccgtaatgtg ggtaaacaac
     4861 gaaatcggcg tggttcaaga tattcctgcc atcggcgaaa tctgccgcga acgcaaaatc
     4921 attttccacg ttgacgcagc acaagcatgc ggcaaagtgc ctgttgatgt tgaagccgca
     4981 aaagttgatt tgctgtctat gtccggccac aaagtatacg gccctaaagg catcggcgcg
     5041 ctgtacgtcc gccgcaaacc ccgcgtccgc ctcgaagccc aaatgcacgg cggcggccac
     5101 gaacgcggct tccgcagcgg cacattgccg acccaccaaa tcgtcggtat gggcgaagcc
     5161 ttccgcatcg ccaaagaaga actcgaacaa gatatggcgc actaccgcaa actgcgcgac
     5221 atcttcctca aaggcatcga aggcatcgaa gaagtctatg tcaacggcga cctcgaacac
     5281 cgcgccccga acaacctgaa cgtcagcttc aacttcgtcg aaggcgaaag cctgattatg
     5341 gcggtgaaag aactcgccgt atccagcggc tccgcctgta cttctgccag tctcgaaccc
     5401 agctacgtcc tgcgcgcgct cggccgcaac gatgaactgg cgcactcatc cctgcgcatc
     5461 accttcggtc gcatgaccac tgaagaagaa gtgcaatttg ccgccgaact gattaaatcc
     5521 aaaatcggca aactgcgcga actgtcgccg ttgtgggaaa tgttcaaaga cgggattgat
     5581 ttgaactcga ttgaatgggc ggcgcattaa agcgtaccaa catgccatcc gaaccttcag
     5641 acggcattcc aaaaacaaag caatcaagag aaaaatatga acgaacaaga tttagatttg
     5701 gacaacctcg acaacctgct tgacgatttc gacggcgtta ccgtggaagg cggcgtcgat
     5761 tcggaaaacg acgacggctg tgaaggcgga gcgtgcaaaa tctaactcag gccgtctgaa
     5821 aaccggcaaa caaaccactt aaatcatcaa aacattaagg aaaccacatc atggcataca
     5881 gcgataaagt aatcgaccac tacgaaaatc cccgcaacgt cggtactttc gacaaaaacg
     5941 acgaatctgt cggcaccggc atggtcggcg caccggcctg cggcgacgtg atgcgcctgc
     6001 aaatcaaagt gaacgatgaa ggcatcatcg aagatgcgaa attcaaaact tacggctgcg
     6061 gttccgccat cgcttcgtcc agcctgatta ccgagtgggt taaaggcaaa agcctggatg
     6121 acgcgctggc aatcaaaaac agcgaaatcg ccgaagagtt ggaattgccg ccggtaaaaa
     6181 tccactgctc catcttggct gaagatgcgg taaaagcggc cgttgccgac taccgcaaac
     6241 gtcaggaaaa cagataaagc ccttcagacg gcatcgtccc gcaatgccgt ccgaaccgcc
     6301 cgccgcttcg ggttcgtccg aggcggtaca acaaggaaga aatatgatta cccttaccga
     6361 gaatgccgca aaacacatca atgactatct cgccaaacgc ggcaaaggct tgggcgtacg
     6421 cttgggtgtg aaaaccagcg gctgctcggg gatggcgtac aaccttgaat ttgtcgatga
     6481 agccgatggc gacgacctga ttttcgaagg acacggcgca cgcatttata tcgacccgaa
     6541 aagcctggtt tatctggacg gcacacaagt cgattacacc aaagaaggtt tgcaggaagg
     6601 tttcaaattt gaaaacccca atgtcaaaga ctcctgcggc tgcggcgaaa gcttccatgt
     6661 ttaagacata aaaatggcgg gaccgtatca aaaccgtccc gccatttttt cgcttcctgc
     6721 ctgttgtagc tgcctttgcc ttttcttttc cgttccacct tgtgtcggaa caaatcagat
     6781 ttcactaagg cttttaaagc attgtcgcgt attttgcctt tattgtgctg cactttgccg
     6841 cccatattca gtcctttcgt ttaagaagcg gcagattata aggcaaaaac agttttctgc
     6901 caaaatctta catttatcat cctactatgt cccaatattt caccctcttc cggattgaac
     6961 ccgctttcga tatcgacacc gaaaacttgg aacaaaccta ccgcgccttg gccgcccgtt
     7021 tccatcccga taaattcgct tcagcttccg cctttgagca aaagcaggca gtgatgatgt
     7081 cttccaccat caacgatgcc taccgcacct tgaaaaaccc catcgaccgc gccgcctacc
     7141 tgctgaaaac atcgggcatc gatgccgacg cgccggagca taccgctttc gcccccgaat
     7201 tccttatgca gcaaatggaa tggcgcgaaa cgctgatgga ggcacgggca ggcaacgacc
     7261 ttgaatcctt gaaaaatctc gacaacgaaa tccgcgacga acaagaaaaa ctgttctgcg
     7321 gtctgaaaca gtcgtttgcc cgacaagatt acgacacagc cgcacaacaa gtccgccaag
     7381 gcaggtttct cgacaaactc cgcaacgaaa tttcctcggc attataatcc gcaccgtgtt
     7441 tcagacggcg taaccgccgc accgttccgc gtcaaaatat gctaaaataa gcaacaattt
     7501 tttgccatac gaaacattga aaccatgacc gacgcaacca tccgccacga ccacaaattc
     7561 gccctcgaaa ccctgccggt aagccttgaa gacgaaatgc gcaaaagcta tctcgactac
     7621 gccatgagcg tcattgtcgg gcgcgcgctg ccggacgttc gcgacggtct caagccggta
     7681 caccgccgcg tactgtacgc gatgcacgag ctgaaaaaca actggaatgc cgcctacaaa
     7741 aaatcggcgc gcattgtcgg cgacgtcatc ggtaaatacc acccccacgg cgataccgcc
     7801 gtatacgaca ccatcgtccg tatggcgcaa aatttcgcta tgcgttatgt gctgatagac
     7861 ggacagggca acttcggatc ggtggacggg cttgccgccg cagccatgcg ctacaccgaa
     7921 atccgcatgg cgaaaatttc ccacgaaatg ctggcagaca ttgaggaaga aaccgtcaat
     7981 ttcggcccga actacgacgg tagcgaacac gagccgcttg tactgccgac ccgtttcccc
     8041 acactgctcg tcaacggctc gtccggcatc gccgtcggca tggcgaccaa tatcccgccg
     8101 cacaaccttt ctgataccgt caatgcctgc ctgcgcctgc tcgatgcacc cgacaccgaa
     8161 atcgacgaac tgatcgacat tatccaagcc cccgacttcc cgaccggggc aaccatctac
     8221 ggcttgagcg gcgtgcgcga aggctataaa acaggccgcg gccgcgtcgt tatgcgcggt
     8281 aagacccata tcgaacccat aggcagaaac ggcgaacgcg aagccatcgt tatcgacgaa
     8341 atcccctatc aggtcaacaa agccaagctg gtcgagaaaa tcggcgattt ggttcgggaa
     8401 aaaacactgg aaggcatttc cgagctccgc gacgaatccg acaaatccgg tatgcgcgtc
     8461 gttatcgagc tgaaacgcaa cgaaaatgcc gaagtcgtct taaaccaact ctacaaactg
     8521 actccgctgc aagacagttt cggcatcaat atggtggttt tggtcgacgg acaaccgcgc
     8581 ctgttgaacc tgaaacagat tctctccgaa ttcctgcgcc accgccgcga agtcgttacc
     8641 cgacgtacgc ttttccggct gaagaaggca cgccatgaag ggcatatcgc cgaaggcaaa
     8701 gcggtcgcac tgtccaatat cgatgaaatc atcaagctca tcaaagaatc gcccaacgca
     8761 gccgaggcca aagacaaact gcttgcacgt ccttggcgca gcagcctcgt tgaagaaatg
     8821 ctgacgcgtt ccggtctgga tttggaaatg atgcgtccgg aaggattggc tgcaaacatc
     8881 ggcttgaaag agcaaggtta ttacctgagc gagattcagg cagatgctat tttacgcatg
     8941 agcctgcgaa acctgaccgg cctcgatcaa gaagaaattg tcgaaagcta caaaaacctg
     9001 atgggtaaaa tcatcgactt tgtggatatc ctctccaaac ccgaacgcat tacccaaatc
     9061 atccgcgacg aactggaaga aatcaaaacc aactatggcg acgaacgccg cagcgaaatc
     9121 aacccgttcg gtggcgacat tgccgatgaa gacctgattc cgcaacgcga aatggtcgtt
     9181 accctgacac atggcggcta tatcaaaacc cagccgacca ccgactatca ggcgcagcgt
     9241 cgcggcgggc gcggcaaaca ggcggctgcc accaaagacg aagactttat cgaaaccctg
     9301 tttgttgcca acacgcatga ttatttgatg tgctttacca atttgggcaa gtgtcattgg
     9361 attaaggttt acaaactgcc cgaaggcgga cgcaacagcc gcggccgtcc gattaacaac
     9421 gtcatccagt tggaagaagg cgaaaaagtc agcgcgattc tggcagtacg cgagttcccc
     9481 gaagaccaat acgtcttctt cgccaccgcg cagggaatgg tgaaaaaagt ccaactttcc
     9541 gcctttaaaa acgtccgcgc ccaaggcatt aaagccatcg cgctcaaaga aggcgactac
     9601 ctcgtcggcg ctgcgcaaac aggcggtgcg gacgacatca tgctgttctc caacttaggt
     9661 aaagccatcc gcttcaacga atactgggaa aaatccggca acgacgaagc ggaagatgcc
     9721 gacatcgaaa ccgaaatttc agacggcatc gaagatgaaa ccgccgacag cgaaaacgca
     9781 ctgccgagcg gcaaacacgg tgttcgcccg tccggtcgcg gcagcggcgg tttgcgcggt
     9841 atgcgcctgc ctgccgacgg caaaatcgtc agcctgatta ccttcgcccc tgaaaccgaa
     9901 gaaagcggtt tgcaagtttt aaccgccacc gccaacggat acggaaaacg caccccgatt
     9961 gccgattaca gccgcaaaaa caaaggcggg caaggcaata ttgccattaa caccggcgag
    10021 cgaaacggcg atttggtcgc cgcaaccttg gtcggcgaaa ccgacgattt gatgctgatt
    10081 accagcggcg gcgtacttat ccgcaccaaa gtcgaacaaa tccgcgaaac cggccgcgcc
    10141 gcagcaggcg tgaaactgat taacttggac gaaggcgaaa ccttggtatc gctggaacgt
    10201 gttgccgaag acgaatccga actctccgac gcttctgtaa tttccaatgt aaccgaaccg
    10261 gaagtcgaga actgaaaatc atctcccgat gccgtctgaa gattcagacg gcatttattt
    10321 tatccctcat ccgtcatcca gcttctcaca atatagcgga ttatagtcaa ttaaaaacaa
    10381 ggggctgtcc tagataacta gggaaattca aattaagtta gagttgcccc tatgagaaaa
    10441 agtcgtctaa gccggtataa acaaataaac tcattgaact gtttgtcgca ggtgtaactg
    10501 caagaacgac agcagagtta gtaggcgtta ataaaa
//
LOCUS       DAWKOX010000064        10473 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.064, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000064 DAWKOX010000000
VERSION     DAWKOX010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.064"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(44..811)
                     /locus_tag="WJK78_001111"
     CDS             complement(44..811)
                     /locus_tag="WJK78_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ7598047.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(899..1726)
                     /gene="mutM"
                     /locus_tag="WJK78_001112"
     CDS             complement(899..1726)
                     /gene="mutM"
                     /locus_tag="WJK78_001112"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ7598048.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPYRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1778..2443)
                     /locus_tag="WJK78_001113"
     CDS             complement(1778..2443)
                     /locus_tag="WJK78_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ7598049.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGRWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRRLADAGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYALVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     VAD"
     gene            2622..4598
                     /locus_tag="WJK78_001114"
     CDS             2622..4598
                     /locus_tag="WJK78_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ7598050.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASRSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4666..5358
                     /locus_tag="WJK78_001115"
     CDS             4666..5358
                     /locus_tag="WJK78_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEZ7598051.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYILLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVLLHD
                     ENETVCAADAVLESPSALLLIITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKL"
     gene            complement(5559..5665)
                     /locus_tag="WJK78_001116"
                     /pseudo
     CDS             complement(5559..5665)
                     /locus_tag="WJK78_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            5991..6287
                     /locus_tag="WJK78_001117"
                     /pseudo
     CDS             5991..6287
                     /locus_tag="WJK78_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245619.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            6257..7303
                     /locus_tag="WJK78_001118"
     CDS             6257..7303
                     /locus_tag="WJK78_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ7598052.1"
                     /translation="MAYYMVLGGWVISYIVNIIGGNLDISSPVSSEVTKSFFTEHIEN
                     SPWEIAFYTFLFVVVNQWILVKGVIGGIEKAAKYLMPLLFLFLIAMVVRNVTLPGAME
                     GITFYLKPDFSKITAELFVFVLGQVFFTLSLGFGVMITLSSYLDKNENLVQTAVITAI
                     TNTIIAVLAGFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSHMWAGPVFAVIFFSLLLI
                     AALTTSLTIYEVLITTIQEKTKIRRTAAITIVLSAIFIFGNIPSILSYGPWKDVSIFG
                     KNIFDAFDYISGNILFMLTALGSALFVGFVMKDEAKDELLYKGNHITVNIWFAYVKYL
                     VPLVILLIFVSNLF"
     gene            7547..8203
                     /locus_tag="WJK78_001119"
     CDS             7547..8203
                     /locus_tag="WJK78_001119"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ7598053.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVEWHDEENVSKLAKKLPAVFSGSRILLDGEDVSDGIRTEAIGMGASAVAQLP
                     KVRASLLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            8358..10043
                     /gene="rpsA"
                     /locus_tag="WJK78_001120"
     CDS             8358..10043
                     /gene="rpsA"
                     /locus_tag="WJK78_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ7598054.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVVALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            10054..10368
                     /locus_tag="WJK78_001121"
     CDS             10054..10368
                     /locus_tag="WJK78_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ7598055.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
BASE COUNT         2736 a         3079 c         2359 g         2299 t
ORIGIN      
        1 atccacaaaa gcgaatcata ctgccacatt ccgacaaccg gtttcagaca gcgatatccg
       61 catcgtcggc gacaacggca cggatgcttt cttcgatttt atcttttaaa gcataacggt
      121 cttcgctttc cgccgcatcc gccacgcaaa cgaaatcgac ttttatcgtc aattttttca
      181 tagacacgat gcgccacagg caggtcggca aaccgacatc ggcatatgag ggacgagccg
      241 tcctttttcc cgtttcgtca taataacgca gcgcgaccgc caaaaccttt gcccccgcat
      301 cgatggcgga ttggaacagc gcggctttga acggcaaaag ccccaatccg gaggaagtcc
      361 gcgcttcggg gaaaaaactg acgttttgac cgcgttgcaa ggtttcgcag acggcgcggt
      421 taatcggttc gatgtcgcgc cgcgaattgc ggttgatgaa caccgttccc gcgttctgcc
      481 ccatcttgcc caataccggc cagcttttga tttcctgctt ggcgataaag ctgctcggat
      541 aaaccgcgct catcgcgaaa atatccagcc aggacacgtg gttggcggca accaagacac
      601 cgttcggatg ttcgggtgcg ggtctgccca cctccaatcc gatatccaaa gccgccaaaa
      661 cccccctgcc caactcgatt accgcccgat tgcgcgactc ggggcaaccg ccgtcaatac
      721 cgcgcaggtt tttcccggtt ttgaacagcc agaccgccaa acggcacaag cggcgcagac
      781 gtgtaaaaaa tgaagcttta tttgaagaca tgagcaattc tttcccgata atcggtgttt
      841 gttgttgaaa cgttcggacg gcataccgat aaaatgccgt ctgaaaccgt tttcagtcct
      901 atttctgaca gttcgggcaa taaaacgtgc cgcgctgccc caaagtttct ttcacaacca
      961 aaccgccgca ctgggggcac ggctgattgt gccgcccgta caccgtatat tcctgttgga
     1021 agtagccgct tttgccgtcg ctgtccacaa aatccctcaa ggtactgccg cccgtttcaa
     1081 tggcgcgccg caacaccgct ttgacggttt caaccaaaag cgcgcactct ttctttttca
     1141 ggcggttggc aggacggtag ggcgaaatgc ccgccctaaa caggctctcg ttggcataaa
     1201 tgttgcccac accgaccacg accgcattgt ccatcagggc aagtttgacc gcgcgcttct
     1261 gcgccttcag ccttgcatac agataatccg cacaaaatgc ctccgacaaa ggctccggcc
     1321 ccagtttttc caacagcgga tgatgttctt cgattccctc ataccaaagt atcgcgccga
     1381 actttctcgg atcgcggtaa cgcatgaccg tgccgtctga aaacacaata tcgacgtgat
     1441 cgtgtctgtc cggcctgccg atacgtccgt ccgacggcgt aaaaatccgc aagctgcccg
     1501 acatccccaa gtgaatcagc agcacgcccg tttgaaagcg gataagcagg tatttcgccc
     1561 tcctgccgca ggacaacacc tgccggccgg acaaaatctc ccccaaatcg ggattaatct
     1621 gccagcgcag cttcaattgg cgcaatacca cggcttccac cgttttccct tcaatatgcg
     1681 gcgcgatgcc gcgcaacgtc gtttccactt ccggcaattc aggcataacc cctcccgaca
     1741 ttttttctga cagatgccgt ctgaaagacg gccgtcccta atccgcaacc cttgccgcac
     1801 ccgccgcaag ggctttgccg cccaaatacc cgtcccacgc gggcaggggc gttacgcccg
     1861 ccgccctttt gaccaaaacc aaagcgtaca ctgcggcaca ttgcggccac caacggtcgc
     1921 ccgccttttc cataaaccgc caaaagcgta tttgcccgag cgacgaaacc ggcggcagat
     1981 acaccataaa tttcccaaat tcaatatcga aaccggcatc ggcaagccgc cttttcaact
     2041 cgggcagcgg cagacaaaac cgtttttccg gcaggcgttc gccgtcaaac caacggctga
     2101 atccccagag cgaatacgga ttgaaacccg tcagcatcaa gcgtccgcac ggtttcaata
     2161 tccggtgcgc ttccgacagg atttgcgaag gaacaccgcc ttcaagcgta tgcggaaaaa
     2221 gcagcatatc cgcagaaaca tccgccaaag ccatattctc cgccgacatc gacatatctc
     2281 gcggcacaca gacaacatct tcagacaggc tcagccacct gccgcccacc tgaaccgcac
     2341 acattcccga aaaacggtat gaatccagat accgcccgaa gaaatcctgt tccaattttg
     2401 caacataccg ccccatcgcc gtatcttcaa accatgcatc catattgcgt ccgtttcaaa
     2461 cagattgcct gccgatattc tattccaaac aggatttctg tcaaaaaaca catcggccgc
     2521 ccatttccga atccgcataa agttcctgta aaacttgacg ctttttcagt caaacagtac
     2581 catcggacga taaaatatgt ttattccgcc gaatataaat catgtccaaa ctcaaaacca
     2641 tcgctctgac cgcatcaggt ctgtccgttt gtccgggttt cctatacgcc caaaacacct
     2701 catcacacca aatcggtttg gcgattatgc gcttaaactc ttcaatactc gacctgcccc
     2761 cgacaaaaca atatttccaa tccggcagcc tgtggagcga gctgcgccaa ggcttccgga
     2821 tgggcgaagt caatcccgaa ctggtacgcc gccacgaaag caaattcatc gcaagccgca
     2881 gctatttcaa cagggtcatc aaccggagta gaccctatat gtaccatatc gccaacgaag
     2941 tcaaaaaacg caatatgccc gccgaagccg ccctgcttcc cttcatcgaa agcgcgttcg
     3001 tcaccaaagc caaatcacac gtcggcgcat caggattatg gcagtttatg cccgctaccg
     3061 gcaggcatta cggcctggaa aaaacaccgg tttacgacgg caggcacgac gtttacgccg
     3121 ccaccgatgc cgcactcaac tatctgcaat acctctatgg actgttcggc gactggccgc
     3181 ttgcctttgc cgcctacaac tggggtgaag gcaacgtcgg acgcgccatc aaccgcgccc
     3241 gcgcccaagg gctcgaaccg acctacgaaa acctgcgtat gcccaacgaa acgcgcaact
     3301 atgtccccaa gctgctcgcc gtgcgcaaca ttattgccac tccccaatct ttcggcatga
     3361 atatcagcga catagacaac aaaccctatt ttcaggcagt cgaaccggat cgtccgctcg
     3421 acaacgaagc catcgcccgg cttgccggca tcacgcaaag cgagctgctc gccctaaacc
     3481 ccgcattcaa cgtccccgcg tttatcccca aaagcaaacg caaactgctg cttcctgtcg
     3541 cgtccgtaca aaccttccaa agcaactacc tcaacgccgc acccgacagc ctgttttcat
     3601 gggaagtcta tacgcctgcc gccaaaacca gcctgtccga catctcgacg gcaaccggca
     3661 tgagcattgc cgacatcaaa cgcctcaaca acctgaacgg caaccttgtc aacgcaggac
     3721 gcagcatcct tgtcgccaag aacggcaaaa cccttcagac ggcatcggaa tccgtcgttt
     3781 ccatcgacat cgacaataca cccgacacct accgttccaa tatgccggca ggcacggtga
     3841 acgtcggcat tgcccgaatc cgacccgccg ccgcacagac agcggacatt accgtcgcac
     3901 ctttgccgca gaaaaccgtc cgtacggaac ccgatcccct tgtccgtatt gccgaacctg
     3961 cccttgcgac agccgcagcg caacctcaaa ccgaaaaaca gaccgccatg ccgtctgaaa
     4021 cccaaaccgc aacactcgcg cagatcatcc cccaaaacga catgcaggcg gcagacgaac
     4081 tcatgcagct tgttgcccga aacaacctgc gccgacaggc tgaagaaacc atctccgccg
     4141 tcatcggcac gcctgacaca gttgccgaac acaacatttc ctcatctccg caacataccg
     4201 ttgccgccga cggcaaacgc cgggcacgtt tggaaacgcg cgtagccaaa gctgccgacg
     4261 gcgaagccga aatctccccg ctccatgcca gcatccaccg cgttgtagaa ggcgacaccc
     4321 tgttcaacat tgccaaacgc tacaacgtca gcgtagccga cctgattgtc gccaacaaca
     4381 tcaaaggcaa caccatccaa aaaggacagg tactccgcct ggcgcaggca gcccctgccc
     4441 aaacccgtat tgaaaaagta tcctacaccg cgcgcaaagg cgacaccttc aaaagtatcg
     4501 ccgcgcgctt caatatccat atcgacgaca tccgccggct caatcccaac ctgaacacca
     4561 tcaatccggg acagagggtc aaactgattg gaagctgatt cggatacggc acatgacagg
     4621 actttctcag tcctgtcttt ttcatcccac atttcccata ccatcatgaa actcatcaaa
     4681 tacctgcaat atcaaggcat aggaagccgc aagcagtgcc aatggctgat tgccggcggt
     4741 tatgttttca tcaacggaac ctgtatggac gacaccgatg cagacatcga ttcctcatct
     4801 gtcgaaacgt tggatattga cggggaagca gtaaccgtcg ttcccgaacc ctatttctac
     4861 atcctgctca acaagcccga agattacgaa acttcgcaca aaccgaaaca ctaccgcagc
     4921 gtattcagcc tgttccccga caatatgcgg aacatcgata tgcaggcggt cggcaggctg
     4981 gatgcggata cgaccggcgt attgctgatt accaacgacg gcaaactgaa ccacaacctg
     5041 acttcgccga gcagaaaaat tcccaagcta tacgaagtaa cgctcaaaca ccccacagga
     5101 gaaacgctct gcgaaaccct gaaaaacggt gtcctgctcc acgacgaaaa cgaaacggtt
     5161 tgcgccgccg atgccgtgtt ggaaagcccg tccgcattgc tcctgatcat taccgaaggc
     5221 aaataccacc aagtcaaacg gatggtcgcc gccgcaggca accgcgtgca gcatcttcac
     5281 cgccggcgat tcgcacattt ggaaacagaa aacctgaaac ccggcgaatg gaaatttatc
     5341 gattgtccga aactctaaaa taacatccaa gaattccatt tatattcatc cacatactca
     5401 ttaaatatat ggtttaaccc aatttaacgc aaaaaatcaa tttacgatat aatccatttg
     5461 tctgagtaac gcctgttcaa gcaggcttat gagtaagacg ttttccccgt aatgtgtttt
     5521 gccatctata cttctcccct tgtatagatg gttttttata gtggattaaa tttaaaccag
     5581 tacagccttg cctcgccttg ccgtactatt tgtactgtct gcggcttcgt cgccttgtcc
     5641 tgatttttgt taatccacta tatttcaaat tccctctctt tcatcattat ttaaatgcta
     5701 tcattaatat aattaacaaa atttcatttc catacaccga tgtagaagaa taacaaatta
     5761 atctatttat aaactccgat tcttcctcat cgggttatac tcatcagaaa tactcactga
     5821 aatatatgcc ttttacatgg aaaatcacta gacagttgaa aaacaattag tcagttcctg
     5881 ttaaaaaacg cgtgtagaat ttccgcttta tctcaatcgg acacggtttc aatatgtctt
     5941 ccccttcaaa taccaatcgt caaacctgat ccagccgatt aacctatatc ctgaccgttg
     6001 ccggcgcgac tgtcggcttc ggcgcgacgt ggcgttttcc ctaccttgtc ggcgaaaacg
     6061 gcggcggcgc gtatgtgttt ttattctgta tcgcgatgct ggttatcggc atcccgatga
     6121 ttttggtgga aaatgtcatc ggacggcgca aaggcgtgaa cgcgctggat gcgttcggcg
     6181 gcccgatgaa cggcaaaccc attgccaaaa tttggaaact ggtcggctgg atgggctgct
     6241 cggcgcgttc ggcatcatgg cttattacat ggtgctcggc ggctgggtta tcagctacat
     6301 tgttaatatc atcggcggta atttggacat ttccagtcct gtttccagcg aagtcaccaa
     6361 aagtttcttt accgaacaca tcgaaaacag tccttgggaa attgctttct acaccttcct
     6421 atttgtggtt gtgaaccaat ggatcttggt aaaaggcgtg atcggcggta ttgaaaaagc
     6481 ggcaaaatac ctgatgcctt tgctgttttt attcctgatt gccatggttg tgcgcaacgt
     6541 taccctgccg ggcgcaatgg aaggcattac cttctatctg aaacctgact tcagcaaaat
     6601 tacagccgaa ctgttcgtct tcgttttagg acaagtgttc tttaccttga gcttgggttt
     6661 cggcgtgatg attaccttgt ccagctatct ggataagaac gaaaatctgg tgcaaaccgc
     6721 ggtcatcacg gccattacca ataccatcat cgccgtactg gccggcttta tgattttccc
     6781 gtcgctcttc agcttcggcg tcgcgcccaa ttctggcccg actttggtat tccaaagttt
     6841 gccgattgtg ttctcacata tgtgggcagg acctgtgttc gctgtcattt tcttctctct
     6901 gctcctgatt gccgcgctga caacttcgct gacgatttat gaagtgttga ttacgaccat
     6961 tcaggaaaaa accaaaatcc gccgtaccgc cgcaatcacg attgtattgt ccgccatctt
     7021 catcttcggc aatattccgt ccattctgag ctatggcccg tggaaagatg tttccatatt
     7081 tggcaaaaat atttttgacg cttttgacta catcagcggc aacatcttgt ttatgctgac
     7141 cgcgctcggc tccgcgctgt ttgtcggttt tgtgatgaag gatgaagcga aggacgaatt
     7201 gctttataaa ggcaaccata taacggtcaa tatttggttt gcctatgtga aataccttgt
     7261 gccgctggtg attttgctga ttttcgtcag caacctgttc taatccgcag caatcgatgc
     7321 cgtctgaaag tcatacctct ttcagacggc attgcgttga tgcccgccac aatacccgca
     7381 acgccagaat ccgaaccggc ttgccggctt ctgtcggata tttccgggca ggcggcgttc
     7441 cgtctgctta gacaatcgtc ctttaaaaca ggtagaatct gccccaacgg gaaacacatc
     7501 cttcagacgg caaaacccat accccaaacc atcaggaatc ccccttatga acagacaaaa
     7561 agtcatcgcc atcgacggcc cgggcgcatc gggcaaaggc acggttgccg cccgcgttgc
     7621 cgccgcattg ggatacgatt atctcgatac cggcgcactc taccgcctga ccgccctata
     7681 tgcacaaaaa caaggcgtgg aatggcacga tgaagaaaac gtttccaaac tggcaaaaaa
     7741 actgcccgcc gtattttcag gcagccgcat cctgctcgac ggcgaagacg tttcagacgg
     7801 catccggaca gaagccatcg gcatgggcgc atccgcagtc gcacagttgc ctaaagtccg
     7861 cgcctccctg ctgcaacgcc aacgcgattt tctgaccgaa aaaggactgg tcgccgacgg
     7921 acgggacacc ggatcggtcg tcttccccca ggccgaactc aaaatttttc tgacagccga
     7981 atccaaaatc agggccgaac gccgcgccaa acaaatcggc atcccctgcg aaggtttggc
     8041 attcgagcgc atcctgtccg acatcgaagc cagagacgag gcagaccgaa accgcaaggt
     8101 tgcccccctg aaacaacaac ccgatgccct gcttttggat acgagccgcc tgactataga
     8161 agaaactgta aaaaaagtgc ttgattggta tcgtaaagtt taaattttca ggtataatcg
     8221 cccgcattgc gtttcagaca gcatgaattt ccccatatgc cgtctgaaac cttatttacc
     8281 cgtctgccct gccaaggacg gcagacaccc accaacccac cccgcacccc ttggcggtgt
     8341 accgaaaaga gttatatatg tctatggaaa attttgctca gctgttggaa gaaagcttta
     8401 ccctgcaaga aatgaacccg ggtgaggtga ttaccgctga agtagtggca atcgaccaaa
     8461 acttcgttac cgtaaacgca ggtctgaaat cagaatccct gattgatgta gctgaattca
     8521 aaaacgctca aggcgaaatt gaagttaaag tcggcgactt cgttaccgtt accatcgaat
     8581 ccgtcgaaaa cggcttcggc gaaaccaaac tgtcccgcga aaaagccaaa cgcgctgccg
     8641 attggattgc cctggaagaa gccatggaaa acggcaacat cctgtccggc atcatcaacg
     8701 gcaaagtcaa aggcggcctg accgttatga ttagcagcat ccgcgcattc ctgccgggtt
     8761 ctttggtcga cgtacgtcct gtaaaagaca cttctcactt cgaaggcaaa gagatcgaat
     8821 tcaaagtgat caaactggac aaaaaacgca acaacgtcgt tgtttcccgc cgcgccgttc
     8881 tggaagccac tttgggtgaa gaacgcaaag ccctgctgga aaacctgcaa gaaggctccg
     8941 tcatcaaagg catcgttaaa aacattaccg attacggtgc attcgttgac ttgggcggca
     9001 tcgacggtct gttgcacatc accgatttgg catggcggcg cgtgaaacac ccgagtgaag
     9061 tcttggaagt cggtcaggaa gttgaagcca aagtattgaa attcgaccaa gaaaaacaac
     9121 gcgtttcctt gggtatgaaa caactgggcg aagatccttg gagcggtctg acccgccgtt
     9181 atcctcaagg cacccgcctg ttcggcaaag tatccaacct gaccgactac ggcgcattcg
     9241 tcgaaatcga acaaggcatc gaaggtttgg tacacgtctc cgaaatggac tggaccaaca
     9301 aaaacgtaca cccgagcaaa gtcgtacaac tgggcgacga agtcgaagtc atgattttgg
     9361 aaatcgacga aggccgccgc cgtatctctt tgggtatgaa acaatgccaa gccaatcctt
     9421 gggaagaatt tgccgccaac cacaacaaag gcgacaaaat ctccggcgcg gttaaatcca
     9481 ttaccgattt cggcgtattc gtcggcctgc ccggcggcat cgacggtttg gttcacctgt
     9541 ccgacctgtc ctggaccgaa tccggcgaag aagccgtacg caaatacaaa aaaggcgaag
     9601 aagtcgaagc cgtcgtattg gcaatcgacg tggaaaaaga acgcatctcc ttgggtatca
     9661 aacaactgga aggcgatccg ttcggcaact tcatcagcgt gaacgacaaa ggttctttgg
     9721 ttaaaggttc cgtgaaatct gtcgatgcga aaggcgccgt tgtcgccctg tctgacgaag
     9781 tagaaggcta cctgcctgct tccgaatttg cagccgaccg cgttgaagat ttgaccacca
     9841 aactgaaaga aggcgacgaa gttgaagccg tcatcgttac cgttgaccgc aaaaaccgca
     9901 gcatcaaact ttccgttaaa gccaaagatg ccaaagaaag ccgcgaagca ctgaactccg
     9961 tcaatgccgc cgccaatgcg aatgccggca ccaccagctt gggcgacctg ctgaaagcca
    10021 aactctccgg cgaacaagaa taaggttgca gacatgacaa agtctgagtt aatggttcgt
    10081 ttggcagaag tgtttgccgc caaaaacggc acgcatcttc tggcaaaaga cgtagagtac
    10141 agcgtaaaag tcttggttga caccatgact agatcgcttg cccgaggtca acgcatcgaa
    10201 atccgcggtt tcggcagctt cgatttgaac catcgtcctg cccgcatcgg tcgcaatccc
    10261 aaaaccggcg agcgtgtgga agtacctgaa aaacatgtac cccacttcaa gcccggtaaa
    10321 gaattgcgcg agcgggtcga cttggcttta aaagaaaatg ccaattaaac cttagcatca
    10381 aaacgccgct gttacgcggc gttttttctg tggtttaact tcatccgctg cttcaatacc
    10441 ttgagccaag caagcaacgg attagagcgt gga
//
LOCUS       DAWKOX010000065        10225 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.065, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000065 DAWKOX010000000
VERSION     DAWKOX010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10225
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.065"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..2034)
                     /locus_tag="WJK78_001122"
     CDS             complement(<1..2034)
                     /locus_tag="WJK78_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ7598056.1"
                     /translation="MPAGRLPRRCPMMTKFTDCTRSNRIQPPTHRGYILKNNRQIKLI
                     AASVAVAASFQAHAGLGGLNIQSNLDEPFSGSITVTGEEAKALLGGGSVTVSEKGLTA
                     KVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQVREYTAILDPVGYSPKTKSALSDGK
                     THRKTAPTAESQENQNAKALRKTDKKDSANAAVKPAYNGKTHTVRKGETVKQIAAAIR
                     PKHLTLEQVADALLKANPNVSAHGRLRAGSVLHIPNLNRIKAEQPKPQTAKPKAETAS
                     MPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAVRPEPVPAANTAASETAAESAPQEA
                     AASAIDTPTDETGNAVSEPVEQVSAEEETESGLFDGLFGGSYTLLLAGGGAALIALLL
                     LLRLAQSKRARRTEESVPEEEPDLDDAADDGIEITFAEVETPATPEPAPKNDVNDTLA
                     LDGESEEELSAKQTFDVETDTPSNRIDLDFDSLAAAQNGILSGALTQDEETQKRADAD
                     WNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTDFSDNLPSNNH
                     IGTEETASAKPASPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLKVYETDAVAET
                     APETPDFNAAADDLSALLQPAEAPSVEENITETVAETPDFNATADDLSALLQPS"
     gene            2240..2770
                     /locus_tag="WJK78_001123"
     CDS             2240..2770
                     /locus_tag="WJK78_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ7598057.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVIFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            2773..3063
                     /locus_tag="WJK78_001124"
     CDS             2773..3063
                     /locus_tag="WJK78_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ7598058.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            3063..3341
                     /locus_tag="WJK78_001125"
     CDS             3063..3341
                     /locus_tag="WJK78_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ7598059.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            3390..4256
                     /locus_tag="WJK78_001126"
     CDS             3390..4256
                     /locus_tag="WJK78_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7598060.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            4327..5085
                     /locus_tag="WJK78_001127"
     CDS             4327..5085
                     /locus_tag="WJK78_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7598061.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            5159..5650
                     /locus_tag="WJK78_001128"
     CDS             5159..5650
                     /locus_tag="WJK78_001128"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ7598062.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDTEK
                     DAHYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            5681..6691
                     /gene="dusA"
                     /locus_tag="WJK78_001129"
     CDS             5681..6691
                     /gene="dusA"
                     /locus_tag="WJK78_001129"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ7598063.1"
                     /translation="MNDNTHTLPPRRLSVAPMLDWTDRHYRYMARQITRNAWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTANPIGYADLVQRLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(6761..7648)
                     /gene="gluQRS"
                     /locus_tag="WJK78_001130"
     CDS             complement(6761..7648)
                     /gene="gluQRS"
                     /locus_tag="WJK78_001130"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ7598064.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAAASYADARSNGGKWLVRMEDLD
                     PPREMPGAANHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLQTAGLVYPCHCSRK
                     DWQTGARRGADGFVYNGRCRNPQQRPAPQGKQPAWRIRVPDRVIGFSDGIVGGYAQNL
                     AGDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLDVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLNLPEAPEADRPAELLD
                     WAVAHWDMDKVPKHAITTP"
     gene            complement(7665..7955)
                     /locus_tag="WJK78_001131"
     CDS             complement(7665..7955)
                     /locus_tag="WJK78_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598065.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYTELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            complement(8108..9163)
                     /gene="tal"
                     /locus_tag="WJK78_001132"
     CDS             complement(8108..9163)
                     /gene="tal"
                     /locus_tag="WJK78_001132"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ7598066.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKQQDLTPKQRYETMAVADVRAACGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDSALDTTLPDRLK
                     GKIAIALAKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGADEAQAQLAEIAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            9260..>10225
                     /locus_tag="WJK78_001133"
     CDS             9260..>10225
                     /locus_tag="WJK78_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ7598067.1"
                     /translation="MAGNEKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAAR"
BASE COUNT         2182 a         2574 c         3046 g         2423 t
ORIGIN      
        1 agaaggttga agtaatgcgg acaaatcgtc tgcggtggcg ttgaagtcgg gtgtttcggc
       61 aacggtttcc gttatatttt cctcaacgga cggtgcttcg gcaggttgaa gcaatgcgga
      121 caaatcgtct gcggcggcgt tgaaatcggg cgtttcaggc gcagtttccg cgacggcatc
      181 ggtttcgtac actttcagga aatcgtgcaa ctcttccggt gtttggactt cggcaactgt
      241 tttttccaag atggtttcgg gcgaggaagc cttcaggaag cctgccagtc cggagggtga
      301 ggcaggtttt gcggaagctg tttcttctgt gccgatatgg ttgtttgagg gcaggttgtc
      361 ggagaaatcg gtatcgacgg tttccggttt gttttcggca gtttgggcga cagattccgg
      421 ttcgggcgtg tcgatgacga tttcgacagg gttgtacggg ttgaaggtct cgggctcgta
      481 cacgctgtct gtggattcga tggcgttcca atcggcatcc gcgcgttttt gggtttcttc
      541 atcctgcgta agtgcgccgg ataaaatgcc gttttgcgcg gctgccaggc tgtcgaaatc
      601 caagtcgatg cggttggaag gcgtatcggt ttcgacatcg aacgtttgtt ttgccgataa
      661 ctcttcttca gattccccat ctaaggcaag tgtgtcgttt acatcgtttt tcggagcggg
      721 ttcgggcgtt gccggagttt cgacttcggc aaaggtgatt tctatgccgt cgtctgccgc
      781 gtcgtcaagg tcaggctctt cctcagggac ggattcttcg gtacggcgcg cgcgtttgga
      841 ttgggcaagg cgcaaaagca gcagcagggc gattaatgcc gcgcctccgc cggcaagcag
      901 caaggtgtac gaaccgccga acagaccgtc aaacagtccg ctttcggttt cttcttcggc
      961 agaaacctgt tcgacaggtt cggaaacggc gttaccggtt tcgtcggtcg gcgtgtcgat
     1021 ggcagaagcg gcggcttctt ggggggcgga ttcggcagcg gtttccgatg cggcagtatt
     1081 tgcagcgggt acaggttcgg gtcgaacggc cggtttttcc gcttttgctt cgggcgcggc
     1141 aacttttgct tcaggttttt caaccggttt ctctaccgtt gcctgtttgg acggttcgga
     1201 cggcatggat gcggtttcgg ctttgggttt cgccgtttgc ggtttgggtt gttccgcttt
     1261 gatcctgttc agattcggaa tgtgaagcac gctgcccgca cgcagtctgc cgtgtgcgga
     1321 aacatttggg tttgccttca gcagcgcatc ggcaacctgt tcgagcgtca ggtgtttcgg
     1381 gcggatggcg gcggcaatct gtttgaccgt ttcgcctttg cggacggtat gggttttgcc
     1441 gttgtacgcc ggtttgacgg ctgcgttcgc gctgtctttt ttatcggttt tgcggagggc
     1501 tttggcgttt tgattttctt gggactctgc tgtcggagcg gttttgcggt gtgtcttgcc
     1561 gtctgaaagt gcagatttgg ttttgggcga gtagccgaca ggatcgagga tggcggtgta
     1621 ttcgcgtacc tgtgcgcctg cgccgatgcg gaataccagg acgggatcgc ggactgcctg
     1681 ttcggaagaa acggcaatga cggctttgtc gcccaacttg tggactttgg cggtcagacc
     1741 tttttcggaa acggtaacgc tgccgccgcc tagcagggct ttggcttctt cgccggttac
     1801 ggtaatgctg ccggaaaagg gttcgtcaag gttggactgg atattcagtc cgcccagtcc
     1861 agcatgtgcc tgaaaggatg cggcaactgc gacggaggcg gcaatcagtt tgatttgtct
     1921 gttgtttttc aagatgtatc ccctgtgggt tggcggctga atacggtttg accgcgtaca
     1981 gtctgtaaat ttcgtcatca tcgggcatcg gcggggcagt cggccggcgg gcatttaata
     2041 tgtgaatgta ccgaccgccg ccacatttta aacggcaatc attcgccgtt tttacaaatt
     2101 atgacatatc tccatctttt ttcaaaaaca tctgtgcata tttgcatcaa tcaaaacaaa
     2161 atttgttggt tttgcaggtg caaaaacagg gttctgcctg tatgattagc gtttatttga
     2221 tttgctttct catttggata tgaaattcgt cagcgacctt ttgtccgtca tcctgttttt
     2281 cgccacctat accgttacca aaaatatgat tgccgctacg gcggtcgcct tggttgccgg
     2341 tgtggttcag gcggcttttc tgtattggaa atataaaaag ctggatacga tgcagtgggt
     2401 cggactggtg ctgattgtga tattcggtgg cgcaaccatt gttttgggcg acagccgctt
     2461 cattatgtgg aagccgagcg ttttgttttg gctgggcgcg ctgttcctgt ggggcagcca
     2521 cctcgccggt aaaaacggct tgaaggcgag tatcggcagg gagattcagc ttccggatgc
     2581 cgtatgggcg aaattgacgt atatgtgggt cggtttcctg atttttatgg gtatcgccaa
     2641 ctggtttgtg tttacccggt tcgagtcgca atgggtcaac tataaaatgt tcggctcgac
     2701 tgcactgatg cttgttttct ttattattca gggtatttat ctgagtacct gtctgaaaaa
     2761 ggaggattga ctgtggaata ttttatgttg ctggcaacag acggggagaa tgtgtatgaa
     2821 gcgcgtatgg cggcacgtcc cgaacacctc aaacggctgg agacgctgaa gtcggaaggc
     2881 cggctgttga cggcaggccc gaatcctttg ccggaggact ccaaccgcgt ttcgggcagt
     2941 ttgattgtgg cgcagttcga gtctttggat gcggcagagg cgtgggcgga agacgatccc
     3001 tatgttcatg caggcgtgta cagcgaagtg ctgatcaagc cgtttaaagc ggtgttcaaa
     3061 taatgccggc cgtcgatttg atccgcgaac gcctgcagac gctcgatccg ctggtgttgg
     3121 aaatcggcga tgagagccat ctgcacaaag gacacgcggg caataccggc ggcggacatt
     3181 atgccgtttt ggtcgttagc ggccgttttg aaggcgtaag ccgcctgaac cgccagaaaa
     3241 cggtcaaatc gctgctcaaa gatttgtttt caggcggcat gattcacgcg ctcggcatcc
     3301 gggcggctac ccctgacgag tatttccata cggcggactg aatgaagtct gcccgaacat
     3361 ttcaatttaa aatttaaaga gagaagatta tgaaagcaaa aatcctgact tccgttgcac
     3421 tgcttgcctg ttccggcagc ctgtttgccc aaacgctggc aaccgtcaac ggtcagaaaa
     3481 tcgacagttc cgtcatcgat gcgcaggttg ccgcattccg tgcggaaaac agccgtgccg
     3541 aagacacgcc gcaactgcgc caatccctgc tggaaaacga agtggtcaac accgtggtcg
     3601 cacaggaagt gaaacgcctg aaactcgacc ggtcggcaga gtttaaaaat gcgcttgcca
     3661 aattgcgtgc cgaagcgaaa aagtcgggcg acgacaagaa accgtccttc aaaaccgttt
     3721 ggcaggcggt aaaatatggc ttgaacggcg aggcatacgc gctgcatatc gccaaaaccc
     3781 aaccggtttc cgagcaggaa gtaaaagccg catatgacaa tatcagcggt ttttacaaag
     3841 gtacgcagga agtccagttg ggcgaaatcc tgaccgacaa ggaagaaaat gcaaaaaaag
     3901 cggttgccga cttgaaggcg aaaaaaggtt tcgatgccgt cttgaaacaa tattccctca
     3961 acgaccgtac caaacagacc ggcgcgccgg tcggatatgt gccgctgaaa gatttggaac
     4021 agggtgttcc gccgctttat caggcaatta aggacttgaa aaaaggcgaa tttacggcaa
     4081 cgccgctgaa aaacggcgat ttctacggcg tttattatgt caacgacagc cgcgaggtga
     4141 aagtgccttc ttttgatgaa atgaaaggac agattgccgg caaccttcag gcggaacgga
     4201 ttgaccgtgc cgtcggtgca ctgttgggca aggcaaacat caaacctgca aaataattct
     4261 gaaaacggga tacggcggca agacgttcag acaggcgttt tgccgccgcg caggacaggg
     4321 aataccatga aacagaaaaa aaccgctgcc gcagttattg ctgcaatgtt ggcaggtttt
     4381 gcggcagcca aagcacccga aatcgacccg gctttggtgg atacgctggt ggcgcagatc
     4441 atgcagcagg cagaccggca tgcggagcag tcccaaaaac cggacgggca ggcaatccga
     4501 aacgatgccg tccgtcggct gcaaactttg gaagttttga aaaacagggc attgaaggaa
     4561 ggtttggata aggataagga tgtccaaaac cgctttaaaa tcgccgaagc gtctttttat
     4621 gccgaggagt acgtccgttt tctggaacgt tcggaaacgg tttccgaaag cgcactgcgt
     4681 caattttatg agcggcaaat ccgcatgatc aaattgcagc aggtcagctt cgcaaccgaa
     4741 gaggaggcgc gtcaggcgca gcagctcctg ctcaaagggc tgtcttttga agggctgatg
     4801 aagcgttatc cgaacgacga gcaggctttt gacggtttca ttatggcgca gcagcttccc
     4861 gagccgctgg cttcgcagtt tgcagcgatg aatcggggcg acgttacccg cgatccggtc
     4921 aaattgggcg aacgctatta tctgttcaaa ctcagcgagg tcgggaaaaa ccccgacgcg
     4981 cagcctttcg agttggtcag aaaccagttg gaacaaggtt tgagacagga aaaagcccgc
     5041 ttgaaaatcg atgccatttt ggaagaaaac ggtgtcaaac cgtaatggca tttccaatac
     5101 cgatgccgtc tgaagccttt tcagacggca ttgcacgttc aggtaaggag gacggcttat
     5161 gcgtgcggtc atacagaaaa cggtaggtgc aaaggtggat gtcgtgtccg aaaacggcac
     5221 ggaaacctgt ggcaaaatcg acggcggatt cgtcgtgctg ctcggcgtaa cgcatagcga
     5281 cacagaaaaa gatgcgcact atatcgccga caaaatcgcc catttgcgcg tgtttgaaga
     5341 cgaagcgggc aagttgaacc tgtctttgaa agatgtcggc ggcgcggtgc tgctggtgtc
     5401 gcagtttaca ctttatgccg atgcggcaag cgggcggcgg ccttcgtttt cccaagccgc
     5461 acctgcagaa caggcgcagc agctttacct gcgaacggcg gaactgttgc gcggacacgg
     5521 gattcatgtc gaaacagggc gtttccgcac gcatatgcag gtgtcgctct gcaacgacgg
     5581 gccggtaacc atactgctgg actctttcat gacgcggatt tccccaaaaa tgaaggttgt
     5641 tccggattga aattgaatct gcaatgatga aatatcgaca atgaacgaca atacacacac
     5701 ccttcccccg cgccgccttt ccgtcgcccc gatgctcgac tggacggaca ggcactaccg
     5761 ttatatggcg cgccagatta cccgaaatgc ttggctttac agcgaaatgg tcaatgccgg
     5821 tgcgattgtt tacggcgaca aagaccgctt tttgatgttc aacgaaggcg agcagcccgt
     5881 cgccctgcaa ctgggcggca gcgatccgtc cgatttggcg aaagccgcca aagccgccga
     5941 agcatacggc tacaacgagg tcaacctcaa ctgcggctgc cccagtccgc gcgtgcagaa
     6001 aggttcgttc ggcgcgtgtc tgatgaacga agtcgggctg gttgccgact gcctcaacgc
     6061 catgcaggac gcggtcggta ttcccgttac cgtcaaacac cgcattggtg tggacaggca
     6121 gaccgaatac caaaccgttg ccgatttcgt cggcacgttg cgcgacaaaa ccgcctgcaa
     6181 aaccttcatc gtccacgccc gcaacgcttg gctggacggt ctttccccca aagaaaaccg
     6241 cgacgttccc ccgttgaaat acgattacgt ttaccgcctc aagcaggagt ttcccgggct
     6301 ggaaatcatc atcaacggcg gcatcaccac caacgaagca atcgccggac acctgcaaca
     6361 cgttgacggc gtgatggtcg ggcgcgaggc gtaccacaac ccgatggtga tgcgcgaatg
     6421 ggacagattg ttttacggcg acactgcgaa cccgatcgga tacgccgatt tggtgcaacg
     6481 cctctacaca tacagccaag cccaaatcca agccggacgc ggcacaatcc tgcgccatat
     6541 cgtccgccac agcctcgggc tgatgcacgg cttgaaaggc gcgcggactt ggcggcgtat
     6601 gctttccgac gcaacgctct tgaaagacaa cgacggcagc ctgattctcg aagcgtggaa
     6661 agaggtcgaa cgggcaaata cgcgcgaata gggcggggct gtatgtgtga aatgccgtct
     6721 gaaggcttca gacggcattt gtgcgtttgt cgggcggtgt ttagggggtg gtaatggcgt
     6781 gtttcggcac tttgtccata tcccagtgtg ccaccgccca gtcgagcagt tcggcagggc
     6841 ggtcggcttc cggtgcttcg ggcaggttga ggtaacggaa cacttggcgg aggagttgtt
     6901 cgcggcggtt taaatccaat gcgggtgcga gcgtctgttt cgaccatttc tgcccttgtg
     6961 cgttggtcag cagcggcagg tgggcatatt gcggtgtcgg aacgtccaaa cactgctgca
     7021 aatagatttg gcgcggcgta gaaacgagca ggtcttgtcc gcggacgatg tgggtaacgc
     7081 cctgttcggc atcgtcggca acgacggcga gttggtatgc ccagtaaccg tctgcacgaa
     7141 gcaggacgaa atcgccgatg tcgccggcga ggttttgggc gtaaccgccg acgatgccgt
     7201 ctgaaaaacc gataacgcgg tcggggacgc ggatgcgcca cgccggctgt ttgccttgcg
     7261 gtgcagggcg ttgctgcgga ttgcggcagc gtccgttata gacgaacccg tctgcgcccc
     7321 gccttgcccc ggtctgccag tctttgcggc tgcaatggca gggatagacc agtccggcgg
     7381 tttgcagacg gcatagtgtt tcttcataca gggcgtaacg gcggctctga taggcgactt
     7441 ctccgtccca ctcgaatccg aatgcctcaa gcgtgtgcag gatatggttt gccgcccccg
     7501 gcatttcgcg cggcggatcg aggtcttcca tgcggaccag ccatttgccg ccgtttgagc
     7561 gtgcatcggc ataggaagcg gcggcggtca gcagcgagcc gatgtggagc agcccggtcg
     7621 ggctgggggc gaaacgtcct gtgtacatat ccggtacggc ccctttattt aagactatta
     7681 atcaaagcca ttatctcatc tttattcagt tccatcccgg gttcttcaag taaggttaaa
     7741 tcatataggg cattatattg ctcttcggta gctgaaccat ccataaggcc ggacgagaaa
     7801 aaatcgaagg ctctatctgc gattctctca ttacttgcat ttctactaac cagtttcatc
     7861 aattctgtat atattgtatg gggaggtacc ggatccttaa aaatcagatc tgaataaatt
     7921 tcattgggtg aaatgatttc gagtgctttt gccatgattc tatttccttt tgtgttggtg
     7981 ggtaatgtcg tgcattaact tcttgcccat taatattttt agggtgaatc cttgatatgc
     8041 cgcactgtgt ccggtcaaac gggcgatgcc gtctgaaagc ctttcagacg gcatcgggat
     8101 gaaaagttta aaccaacggt gcgagcagtt tttcaaaggc ttcttcaaat tgtttcaaac
     8161 cgtcttcctg caaacgcgcc gccaaggttt cgacatcgat gccgagcgcg gcaatttcgg
     8221 caagctgcgc ttgcgcttcg tccgcgcctt cggtcagcgt ggctttggct gtgccgtggt
     8281 cgataaaggc tttgagcgtg gcatcgggaa cggtgttgac ggtgtgcgcg ccgatcaggc
     8341 tgtcaacgta gagcgtgtcg ggataggctg ggtttttcac gccggtagat gcccataaaa
     8401 gctgcacgcg gtttgcgcct tgggcttcca gtgcggcaaa ttcgggggcg gtgaaatatt
     8461 gttcccaatc ttgataggcg gctttggcaa gggcgatggc gattttgcct ttgagccggt
     8521 cgggcagtgt tgtgtccagc gcactgtcca cacgcgagat gaagaagctg gcgacgacgt
     8581 ggatatgggc aacgctttgt ccggctgcca agcgtttggc aatgccgcgc gcgtaggcgg
     8641 cgtaggcttt gagggtttgg gcgcgtgaga acagcagggt caggttcacg ctgatgccgt
     8701 ctgaaacgag ggtttcgagc gcatcgatgc ctgcgtcggt ggcaggcact ttaatcatcg
     8761 cgtttttgca cccgatggcg gcgtagaggc ggcgcgcttc ttcaaccgtg ccttgcgcgt
     8821 ctttggacaa ttcgggcgaa acttcgaggc tgacgaagcc ggttttgccg ccggtggatt
     8881 cgtgttcggc aagacagacg ccgcaggcgg cacgcacatc ggcaaccgcc atcgtttcgt
     8941 agcgttgttt gggggtcagg tcttgctgct tgagggcggc aacctcgtcg gcgtaaagcg
     9001 catcgccggc gaaggctttt tgaaagatgg cgggattgga agttacgccg cacacgcctt
     9061 gtttcagcat ttgcgccaat tcgccgcttt gcacgagcga gcgggaaagg ttgtccagcc
     9121 agatttgttg tcctaatgct ttaacgtccg ataaaatagt catttctgat tcctttggat
     9181 ggatgtgtat gtttcaaagg cttatgctac cccgattcgg aaattttggg tagttttatt
     9241 acagcaaagg cggatggcga tggcaggaaa cgaaaaatat cttgattggg cacgcgaagt
     9301 gttgcacacc gaagcggaag gcttgcgcga aattgcggcg gatttggacg aaaacttcgc
     9361 ccttgcggcg gacgcgttgt tgcactgcaa aggcagggtc gttatcacgg gcatgggcaa
     9421 gtcgggacat atcgggcgca aaatggcggc aaccatggcc tcgaccggca cgcccgcgtt
     9481 tttcgtccac cctgcggaag cggcacacgg cgatttgggc atgattgtgg acaacgacgt
     9541 ggtcgtcgcg atttccaatt ccggtgaaag cgacgaaatc gccgccatca tccccgcgct
     9601 caaacgcaaa gatatcacgc ttgtctgcat caccgcccgc cccgattcaa ccatggcgcg
     9661 ccatgccgac atccacatca cggcgtcggt ttccaaagaa gcctgcccgc tggggcttgc
     9721 cccgaccacc agcaccaccg ccgttatggc tttgggcgat gcgttggcgg ttgtcctgct
     9781 gcgcgcccgc gcgttcacgc ccgacgactt cgccttgagc caccctgccg gcagcctcgg
     9841 caaacgccta cttttgcgcg ttgccgacat tatgcacaaa ggcggcggcc tgcctgccgt
     9901 ccgactcggc acgcccttga aagaagccat cgtcagcatg agtgaaaaag ggctgggcat
     9961 gttggcggta acggacgggc aaggccgtct gaaaggcgta ttcaccgacg gcgatttgcg
    10021 ccgcctgttt caagaatgcg acaattttac cggtctttcg atagacgaag tcatgcatac
    10081 gcatcctaaa accatctccg ccgaacgtct cgccaccgaa gccctgaaag tcatgcaggc
    10141 aaaccatgtg aacgggcttc tggttaccga tgcagatggc gtgctgatcg gcgcgctgaa
    10201 tatgcacgac cttttggcgg cgcgg
//
LOCUS       DAWKOX010000066         9798 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.066, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000066 DAWKOX010000000
VERSION     DAWKOX010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.066"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(12..1307)
                     /locus_tag="WJK78_001134"
     CDS             complement(12..1307)
                     /locus_tag="WJK78_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ7598068.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGVAGVAAEAGAQIFEQSPMTRIEP
                     HQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFQPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     DDVKIEYSWGGECDITANLVPHFGRLAANVFYAQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1433..2320)
                     /locus_tag="WJK78_001135"
     CDS             complement(1433..2320)
                     /locus_tag="WJK78_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ7598069.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(2320..3285)
                     /locus_tag="WJK78_001136"
     CDS             complement(2320..3285)
                     /locus_tag="WJK78_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ7598070.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWSTLNPFGDGENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3301..4425)
                     /gene="potA"
                     /locus_tag="WJK78_001137"
     CDS             complement(3301..4425)
                     /gene="potA"
                     /locus_tag="WJK78_001137"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ7598071.1"
                     /translation="MTATTASSTKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLSNG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4621..4728)
                     /locus_tag="WJK78_001138"
                     /pseudo
     CDS             complement(4621..4728)
                     /locus_tag="WJK78_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4807..5076)
                     /gene="rpsO"
                     /locus_tag="WJK78_001139"
     CDS             complement(4807..5076)
                     /gene="rpsO"
                     /locus_tag="WJK78_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ7598072.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5299..6234)
                     /gene="secF"
                     /locus_tag="WJK78_001140"
     CDS             complement(5299..6234)
                     /gene="secF"
                     /locus_tag="WJK78_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ7598073.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWHF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGTALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6238..8091)
                     /gene="secD"
                     /locus_tag="WJK78_001141"
     CDS             complement(6238..8091)
                     /gene="secD"
                     /locus_tag="WJK78_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ7598074.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGSVWKPKAEMAGGKE"
     gene            complement(8303..8569)
                     /gene="yajC"
                     /locus_tag="WJK78_001142"
     CDS             complement(8303..8569)
                     /gene="yajC"
                     /locus_tag="WJK78_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ7598075.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            8697..>9798
                     /locus_tag="WJK78_001143"
     CDS             8697..>9798
                     /locus_tag="WJK78_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ7598076.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2499 a         2609 c         2434 g         2256 t
ORIGIN      
        1 gcctgcgacg cttaacggct gtctttccac tgataatatt tcgagccgag gaaagaaccg
       61 agtttgcgca aaaacggttg caggataata ttcggctggc gcaaccgctc aaacggcttc
      121 agacggcatt cgtcccctaa aattgcttcg gcaaccgcca gacctgcaat gcctgttatc
      181 gccatcccgt gtccggaata accttgtgca taaaaaacat ttgcggccaa acgtccgaaa
      241 tgcgggacaa ggttggcggt aatgtcgcac tccccgcccc acgaatattc gattttgaca
      301 tcgtcaagct gcggaaaaac tttaagcata tcttggcgga caagctcggt catacgcgca
      361 ggattgtcga taaactcgtt atccttaccg ccgaaaagca gtctgccgtc cgcgctgagg
      421 cggtaataat ccaaaatatg gcggttgtcg catactgcca tattgttacg gataagccct
      481 tttgcgcgcg cccccaaggg ttcggtcgca ataataaagg tgctaacggc aatcgccttg
      541 cgttccaaag gctggaatat cgggttcaaa cctgcatagg tattgacggc atacaccaga
      601 tttttgcatt cgacgctgcc ttcgggcgtg taaaccagcc aaccgttttg atgcggttcg
      661 atgcgcgtca tcggggactg ctcgaaaatc tgcgcgccgg cttcggcagc gacaccggca
      721 acacccaacg tgtaattgag cggatgcagg tgtccggata aggggtcgaa ttgtgcccct
      781 tggtacatat cgctgtcaag ctgctgtttc aactcggctt tatcccaaag ttgataatga
      841 ctcgcaccgt aatgccgttg ggcgtgttca tgccactgct gcaactcttc ccaatgctgc
      901 ggacggacgg caaccgtggc ataaccgcgc tgccaatcgc aatcaatggc atgtttgcgg
      961 acgcgttcgt ccaccagttc gaccgcctgc aaagactgtt gccaaaacca ttgcgcctgc
     1021 tccaagccga cctgtttttc aatttccccc ataccgcagg cgtaatcgct gataacctgc
     1081 ccgccactcc gtcccgacgc gccgaaaccg atacgcgcgg cttccaacac aaccgtttca
     1141 tgtccctgct ccgccaaggg caatgcagtg cacaaaccac tcaatccgcc gccgatgata
     1201 caggtatcgg ttttcagacg gcattgaagt ttcggataaa cagtatgagg attaaccgaa
     1261 ctgaaataat aagaaggcag atattcttga aaatcagggc gaatcattgt gtttgcttta
     1321 tcaggtgtat tttcggacgg aatgatacag gctgtcgggc catatcgtcc aaacagaaaa
     1381 tcggttgaag aaaacaggct gacccagtca tgcggtcagc ctgccttatt aattaatttg
     1441 ctttctcggc agccaatttt tcttggcggt aggcttctgc cgcttctcgg tcacgcttgg
     1501 ttgcctgcct catcatccaa taattgacga tgatgaccaa tgttccgatg atgccgatta
     1561 ggatggtcgc caagacattc atctgcggat cgagacccaa cttgattttg gagaaaatca
     1621 cctgcggcaa tgtggatgaa ccggggccgg agaggaatga ggtaatcacc aaatcatcca
     1681 aagacagggt aatgccgagc agaaagcctg aagcgatggc aggggcaatc aaaggcaaag
     1741 tgatgacaaa aaagattttc agcggacgcg cgcccaaatc cattgcggct tcttcgagcg
     1801 actggtcaag ctcaaccaga cgcgaacgga taacaacggt aatgtacgcc atacacagcg
     1861 tcgtatgtcc gaggaagatg gtgaaaaagc cacgatcgaa gtagagatgt tgtaaccatt
     1921 cgctgccctg caaaaatatc tgtacctgaa taatcagcag cagcatagac agaccggtaa
     1981 tcacgtcggg catcaccata ggtgcggaaa tcataccggc gaacaaggta ctgccgcgaa
     2041 aacgtttaat ccgcgccatc gcatagcctg ccagcgtgcc caaaacgacg gcagcaagcg
     2101 aagacacaac ggcaatccgc agcgacagcc aagcggcttc caagatggtg tcgttttcca
     2161 gcaatgcgcc gtaccacttg gtcgaaaagc cgccccaaac ggttaccagc ttggattcgt
     2221 taaacgaata gatgaccaaa acaaccagcg ggatatacag aaacgccagc gacagtgcca
     2281 acatcagttt caagaaccaa gataatttgg atttctgcat tatttggctc cttcttccaa
     2341 ttcgcggttt tcataatgct gaaacagggc aatcggcacg accagcagcg cgaccatcac
     2401 gacggcgacg gcggaagcca gcggccagtt gttttgatcg aagaacgcct gccacaagac
     2461 tttaccaatc atcaggtttt ccgaaccgcc gaccagctcg ggaatgacga actcgccgac
     2521 agcagggacg aaaaccagca tggagcctgc aataatgccg gttttcgaca aaggcagggt
     2581 aatcgtcaag aacgatttga ccggccccgc gcccaaatcg gaagccgctt caagcaggcg
     2641 gttgtcgagt ttcaccagtt gcgtgtatag cggcagaatc ataaacggca gataggcgta
     2701 aaccatcacc aaattgagcg aaaaggcatt gtagaacaaa tccaaaggct cgctgataat
     2761 acccatttta atcaacaggt tgtttacaat gccgttatgc ccgagcagac ccatccacgc
     2821 atagacgcgc aacaggaacg atgtccaaaa gggcagcata atggcaagca gcaaaccatt
     2881 gcggacagaa ggattggcac gagaaatcgc ataggcggtc ggataaccga ccaacagaca
     2941 aattaccgtc gtagtcagcg cagtcttaat tgaagaccaa taagtcatca gatagatatt
     3001 gctgttttca ccgtcgccga acggattgag cgtactccaa aaattttgga agatgtctgc
     3061 ataattttgg tagctgacag caatattcag acgacccaaa tcctcatcta tcgtcgttaa
     3121 aggagtaaac ggcgggatgg cgatttcttg ttcggcaaag ctgattttca gcacgatggc
     3181 gaacggaatc agaaacagca ccaaaagcca aatatacggt acggcaatca ccgcacgctg
     3241 ccccggacgg cggaacagtt tgtttttcag tttattaagg ttcattgcat tccccttaaa
     3301 tcaacggaac agtggcgtag gctggttttc cggccagctg atatagacgg tttcgtccca
     3361 agttggcggt gtaatgttgc gcacatacca gtaaggggcg gggacttggc tcttgacgac
     3421 gcgcccgttg gagagtttga tatggtatat ggcgaagctg cccaaatagg cgatttcttt
     3481 taccgtgcct ttcgcccagt tgtagtcgcc caaatattcg ggtttttctt tatataaatc
     3541 aatatcctct ggtcgaatac taacccaaag gtcctgctcg ctcggaccac ccaaaccgtg
     3601 gtcgatgcgg acgtggtttt ccaaaccttc gcattcgata acggcatagt cggcatgatc
     3661 ttcaatcacc acaccgtcaa agatgttggt ttcgccgata aactcggcag tgaagcggct
     3721 gttgggatag tcgtacacgt cgctgggtgt gccgacttgc tgcaactgac cgtcggacat
     3781 aatggcgatg cgggtcgcca tcgtcatcgc ctcttcttgg tcgtgtgtaa ccataataca
     3841 ggttacgccg acttgttcca gcgtattgac caactcaagc tgggtttgct ggcgcagttt
     3901 tttgtccaac gcgccgaggg gctcatccag cagtagaatt ttcggacgtt ttgccagact
     3961 gcgtgccaaa gcaatgcgct gctgctgacc gccggacaat tggtgcggtt tgcgtttagc
     4021 aaatttggtc atctgaacca ggcggagcat ttcttcgacg cgcgcggcga tttcgccttt
     4081 aggcattttg tcctgtttca gaccgaaggc aatgttttgt tctacggtca tatgcggaaa
     4141 aagcgcgtaa ctttggaaca tcatattgat ggggcgatca tagggtgcaa gtttggtaat
     4201 atcctgacca tcaaggataa tttttccctg attgggactt tccatacccg ccagcatacg
     4261 cagcagcgtg gattttccgc tgccggaact gcccaaaaga gcgaaaattt cgtgttgata
     4321 aatgtccaag tcgatgttat cgacagcgta attgtcacca aactttttca ccaaaccttg
     4381 gatttgcaga taaggcttgg ttgaagacgc agtggttgcg gtcataatgg caatactcca
     4441 ataaaaagac gagtaccggc aaaacggatt ttcgaatggg tgataaaaag ctgtttgatt
     4501 gctggcggga gtcgcaacgt ctgatgccgt ctgaaactct tgtgaagcgc acgggcagca
     4561 tgaaatggaa caagattcca aagaacttta tattatatta gtttatgcgg ttttcgggca
     4621 atatagtgga ttaaatttaa accagtacag cgttgccttg ccttgccgta ctatttgtac
     4681 tgtctgcggc ttcgtcgcct tgtcctgatt taaatttaat ccactataaa tatggatttg
     4741 agcttgtcgg aaagcaacag aaaagaaaac accgcccatt tttctgggcg gtgtcggaaa
     4801 gcgtaattat ttacgcagac ccaagcgggt aatcaacgcg cgatacgtat cgggctgggt
     4861 acggcgcaag taggccagca ggcggcggcg ttggctgacc attttcaaca ggccgcgacg
     4921 gctgtggtgg tcttttgggt tggctttgaa gtggggggtc aggtcgttga tgcggaaagt
     4981 caacagagcg acttgtactt cggaagagcc ggtgtcgcct tctttgcgtt ggaaatcttt
     5041 aacgatttgt gctttttgtt ctacggtcag tgccataatg aaaactccaa aaatataaga
     5101 atccccatag ggattcagac aagtttgcca agcctgaaga caacggcaaa ctccctatgc
     5161 ccaagatagg acaacgtggc attatgacac aattcccgca tttctgcaca atattttaag
     5221 accgtggaag taaccgttaa aaatgccgtc tgaagcattg tctgcttgag acggcaatgt
     5281 tcagacggca tatgcgcttc aaaccacgat ttcttctttc ttcttcggtt ctttaccgat
     5341 attgtcgcgg ctcaaaccga acattagcag aagcgggctg gcaaccaata cggaagaata
     5401 aatgccgaac acgatgccga tggtcaacgc catagaaaag ccgtgcaagg ccgtaccgcc
     5461 gaacaccagc atggatacga ccatcgcctc ggtcgaaccg tgggtaatga tggtgcggct
     5521 catcgttgcg gtaatcgcgt tgtcgatgac ttccggcacg gcatgtccgc gcatcgccgg
     5581 cttgcggaag ttttcacgga tacggtcgaa gacgacgacg gattcgttca cagaatagcc
     5641 caatacggca aggatacccg ccaagacggt cagcgaaaat tcccattgga agaaggcaaa
     5701 gcagccgaga ataatcacga tgtcgtgcat attggcgata atggcagata cggcaaaatg
     5761 ccattcgaaa cgcatcgaca ggtaaataat gatgccgata acgacaaaac ctaaagccat
     5821 caatccatta cttaccaatt cctcaccaac ttgcgggccg ataaattcga cttggcgcaa
     5881 agtaacgtcg ggactgtctt ttttcagcaa atccataacc tgattggaca actgtgcgga
     5941 agtaacacct tctttgttcg gcaggcggat catgatgtgt ttgttcgtac ccaatgcctg
     6001 aacctgtaca tcacctattt tcagcgtatc gaggcgttcg cgcatcttat tgacatccgc
     6061 accctgctga tattggactt ccattaccgt gccgccggta aattcgacag agaaattcag
     6121 acctctggta accaaaaaga atacggcggc aataaaggta accaacgaaa taaaggtcgt
     6181 cagtttgccg tagctcataa acggaatatc gcgtttgatt ttaaagagtt ccatagctta
     6241 ctccttgcct cctgccattt cggctttcgg cttccacacc gaaccgatgg aaatattctg
     6301 caatttgcgt ctgcgtccat accacagatt gaccaacgca cggaatacga cgacggacga
     6361 atacatcgaa gtcagaatac ccaaacagtg tacgaccgca aaaccgcgta ccgggccgga
     6421 accgaatacc aaaagcgcga taccggcaat cagcgaagtc aggttggaat cgacaatggt
     6481 cgcccatgcg tgttggaaac cgagattgat tgcctgctgc ggcggcacgc cggcacgcaa
     6541 ttcttcgcgg atacgttcgt taatcaagac gttggagtcg attgccatac ccaaagtcaa
     6601 cgccagcgcg gccatacccg gtaacgtcaa cgttgcctgc atggcagaca aaataccgat
     6661 taggaacagt atgttggcac tcaatgcaat ggtagaaaag aaacccatca gacgatagta
     6721 aaccaccatg aatgcagcaa cgatggcaaa accccataaa gtcgaatgga agcctttttc
     6781 gatgttctcc ttacccaaag acggaccgat ggtacgttct tcgacaatct gcatcggcgc
     6841 ggcaagagaa ccggcacgca acagcaaaga cgtatcattg gcttcggctg tcgtcatgct
     6901 tccggaaatt tccacgcgtc cgccggtaat ggcagtacgg ataaccggcg cggttacaac
     6961 ctcggatttt ccttggtcga tcaaaaccat cgccatgcgt ttgccgacat ttgcggcagt
     7021 cagttcgcca aaaatgctgc cacccgcgct gtccaagctc agactgacag caggtgcgcc
     7081 catttggtcg aaactcggtt gcgcatcgtt gatgttgtcg cccgtcagct cgacctgttt
     7141 gctgattagc agagtttcgg gacgatctcc gccgcttgaa agcagctcat aaccgctcgg
     7201 cacgttgcct tccaatgcct cgcgcaactt ggcaggatcg tcctccacca tacgcaattc
     7261 caaagtcgcg gtacggccga tgatgtcttt tgccttggca gtatcctgaa cgcccggaag
     7321 ctgcacgacg atacggtcgg caccggactg ctggatgacg ggttcggcca cgcccaactc
     7381 gttcacacgg ttgtgcaggg tagtgatgtt ctgtttgacc gcatcggaac gcactttatt
     7441 gaccgcctct tccgaaagcg tcaagacgat attgctgccg tctgaattca gcgttgcttc
     7501 aggaaacagc ttgcgcaact gcggcagtgc cttttgcaca tcacctgcat cctgcaaagg
     7561 gacggtcagg ctgtttccag cctgacgcac cgtgccgctg cggatttttt cgcggcgcag
     7621 ttcgcggcgg atgtcgcccg aataacgttc aaacgttttc tgcatcgccg ctttcatatc
     7681 gacctgcatg gtgaaatgca cgccgccgcg caggtccaaa cccaaaaaca tcggattggc
     7741 tttgattttc gccatccatt cggggctgtc cgccaacagg ttgagcgcgg taatataccc
     7801 ttcgcccaaa gtgttttcga tgacgtcgcg cgctttaagc tgcgtttctg tgtctttgaa
     7861 acgcactttc agtgaattgt ccacaacaaa catcccgtcg gtctgaatac ctgcgttttt
     7921 cagcgcggca tccactttgg attgagtctg ttcgttgatg atgatggctt gtcggttggt
     7981 cgatacctgc acggcgggtg tttcgccgaa taggttgggc agcgaataca ctgcggcaac
     8041 cgcaatcgtg aacacaatca gcagatattt ccataaagga taacggttca tcattgttcc
     8101 ttaatggttg gaaccccacc ctttcggtgg tgtcggaatc gggctatttc agaagaggca
     8161 aaaacccttc ccagccaggc aagaccggaa ggcggcatct tgaatatgcc gccctgcgtg
     8221 tcggaacatg gtcaagcctt cggttggaat tcaaaacaaa gtgccgcatt cgggctttcc
     8281 agatgcggct tgtcggcaca aatcaatcga cttttgcggc aatcgcattg cgttctactt
     8341 cgacctcgat ttttgtaccc tgtccgatat ccacggtaaa aaactgttcg ccgactctgg
     8401 ttaccttacc cttgaaacct gccgccaaga ccactttgtc gccgactttc aaggcggcaa
     8461 gcattgcctg atgcgctttg aatttctttt gctgcggacg catgatcagg aagtagaaca
     8521 ccaccataat caacactaaa ggagcaaatt gtgcaacagc ttgattcata atttatccgt
     8581 tctttctaat atggttgaaa atcgagaggg gtatataata acataagacc gtaaacaata
     8641 tatcgggttt gccgtccgta ccgaccgtat accgcagcct gcccgtccac aaacccatgt
     8701 ccttgacccg cctaatcttg aaattctatg cactgttgcg cctttttttg ggcaaaaacg
     8761 cccgcaccgc atggatttcg catcccgcct gtgccgggca cgaacccggc gcaaaccatc
     8821 ccgattcgcc cgaccgcatc ctctgcatcg agcaggcatt gcgccgcgcc ggtatttggc
     8881 agcacctcca aaccatagag gcggaagaaa tcagcgatac gcgcctcgca cttgtccact
     8941 cgagcaaata tctgaaccgt ttggaatctt gcctgcccca aaaaggcaag attttccgcc
     9001 tggataacga cactgcaatc agcacaggct cgctgtctgc cgcacacttt gccgccggtt
     9061 cggcagttca ggcagtcgac atggtcatga accgtaaagc atggcatgcc ttttgcgccg
     9121 cccgcccgcc cggacaccat gcgggcagcg gcaaagccgg cggattctgc ctgctgaaca
     9181 acgttgccgc cggcgtcatg catgccattg ccgaataccg cctgaaacgc attgccgtca
     9241 tcgatttcga tgtccactac ggcgacggta cggcagaaat attcaaagac gatccgcgca
     9301 tcctgttttt caacctgttt gaaaccgacc ttttcccctt ccccgaaaac aacgatatgc
     9361 ccgacggcgg caatatggtg cacctgccct tgccgccggg aacgggcagc cgcacattcc
     9421 gcgaagccgt ccgcagacag tggctgcccc ggcttgccgc attcaaaccc gaactggtgc
     9481 tgctgtcggc aggattcgac gcacaccgtc tagacgaatc gggcaggctc aacctgcacg
     9541 aggcggattt tgcctggctg acacacaaaa tcattcagac ggcatcgggc tgccccggca
     9601 aaatcgtatc cgtactcgaa ggcggctaca cccttgaacc tctggcacaa tctgctgccg
     9661 agcatatccg cgtgctggcg gggctgggca aatccgatgc cgcaaccgcc tatcagaaaa
     9721 cactggaccc aacaaaaaaa cggtttgcca aaccgaaaac cggacaggtg cgccaaccta
     9781 cccaatccga ccgttacg
//
LOCUS       DAWKOX010000067         9409 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.067, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000067 DAWKOX010000000
VERSION     DAWKOX010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9409
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.067"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(115..1557)
                     /gene="aldA"
                     /locus_tag="WJK78_001144"
     CDS             complement(115..1557)
                     /gene="aldA"
                     /locus_tag="WJK78_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ7598077.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRGRADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1592..1792)
                     /locus_tag="WJK78_001145"
     CDS             complement(1592..1792)
                     /locus_tag="WJK78_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598078.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTDANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTAIYLGIN"
     gene            complement(1801..2190)
                     /locus_tag="WJK78_001146"
     CDS             complement(1801..2190)
                     /locus_tag="WJK78_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598079.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLVN
                     YSYLDNCLVTLTADRISVSFIREIQAA"
     gene            complement(2191..2367)
                     /locus_tag="WJK78_001147"
     CDS             complement(2191..2367)
                     /locus_tag="WJK78_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598080.1"
                     /translation="MSGYVQFLGTDSKGQSKFIFVGTNENGSITTIHTKSGKDFWRTL
                     NNNPKNKTIYPKAR"
     gene            complement(2398..3315)
                     /locus_tag="WJK78_001148"
     CDS             complement(2398..3315)
                     /locus_tag="WJK78_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7598081.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYMEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLNFGINRSRFQIDADGGKVILISVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYACFTPILYREPVRIWNLSPNLRGLAASCLQAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFADGA
                     HQVNRLADALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3488..4288
                     /locus_tag="WJK78_001149"
     CDS             3488..4288
                     /locus_tag="WJK78_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7598082.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLSGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTQLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4336..5112
                     /gene="mlaE"
                     /locus_tag="WJK78_001150"
     CDS             4336..5112
                     /gene="mlaE"
                     /locus_tag="WJK78_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ7598083.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5163..5657
                     /gene="mlaD"
                     /locus_tag="WJK78_001151"
     CDS             5163..5657
                     /gene="mlaD"
                     /locus_tag="WJK78_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ7598084.1"
                     /translation="MKKNILEFWVGLFVLLGVAAVGFLAFRVAGGAAFGNSGKTYTVY
                     ADFSDIGGLKANAPIKSAGVLVGRVGSIELDPKSYQAKVRLDLDSKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5694..6284
                     /locus_tag="WJK78_001152"
     CDS             5694..6284
                     /locus_tag="WJK78_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ7598085.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVSQIRQNATQVLSILKN
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDTQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGGK"
     gene            6335..6613
                     /locus_tag="WJK78_001153"
     CDS             6335..6613
                     /locus_tag="WJK78_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ7598086.1"
                     /translation="MHTELKNGILHIGGDITVKTLTAAAFTRFRQQCRLKDTCAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6610..7437
                     /locus_tag="WJK78_001154"
     CDS             6610..7437
                     /locus_tag="WJK78_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ7598087.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7562..7924
                     /locus_tag="WJK78_001155"
     CDS             7562..7924
                     /locus_tag="WJK78_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ7598088.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7921..8307
                     /locus_tag="WJK78_001156"
     CDS             7921..8307
                     /locus_tag="WJK78_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ7598089.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            8304..8792
                     /locus_tag="WJK78_001157"
     CDS             8304..8792
                     /locus_tag="WJK78_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ7598090.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8875..9042)
                     /locus_tag="WJK78_001158"
     CDS             complement(8875..9042)
                     /locus_tag="WJK78_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ7598091.1"
                     /translation="MEDDVWPGHRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(9009..9389)
                     /locus_tag="WJK78_001159"
     CDS             complement(9009..9389)
                     /locus_tag="WJK78_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ7598092.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
BASE COUNT         2185 a         2619 c         2355 g         2250 t
ORIGIN      
        1 aaagacaaaa acatcgatgt cggtcatgac tgattgccgg tgaaactgta aaaatgccgt
       61 ctgaacctga aaacgggttc agacggcatt ttctatcggg gttttaaagc ggcattaaat
      121 gtcggtttcc agataaacga cttgggtttg cagatattct tccaaaccgt gtttgccgtc
      181 cgcgccgccg atgccggatt ttttccagcc cgcgtggaag ccttgcatgg cttcaaagtt
      241 ttcgcggttg atgtaggttt cgccgaattg caggcggcgg gtaacgtaga aggcttcgtt
      301 taaattagtc gtataaacag aactggtcag accaaactcg caatcgttag ccagtgcgat
      361 gacttggtca agcgtgtcga aagcggaaac gggcagaacg gggccgaagg tttcttcttt
      421 cataatgtcc atactgttgt cggtgtcggt cagcagggtc ggctcgaaga aataaccgcg
      481 tccttcggcg cgtttgccgc cgcagaccag tttcgcacct tgtttgactg cccgttccac
      541 tttttcggca acggctttga cggcgcgctc ttcaatcagc gggcccattt ccagcgcgcc
      601 tgcttcggct tcggcagggt tgccgtagcg cacgcctttc atggcggcag tcattttttc
      661 aatgaatgcg tctttcagac tgctgtggac ataaacgcgc tcggcgcagt tgcagatttg
      721 accggtgttg ccgacacgcg aagccaagat ggatttcacc gccaaatcca aatccgcgtc
      781 tttcaaaacg atggcggggg ctttgccgcc gagttccaac gaaactttgg tgatgttggc
      841 ggaagcggct tccatcactt ggcggcccgc ttcgacggag ccggtcaggc tgaccatatc
      901 gacttgcgga tgggcggaca aggcattgcc gatttccgca cccggaccgt tcacaacgtt
      961 gaacacgcct gctggcagtc cgaccgcatc gacgatttcg gcgaagatgt ggcagttgat
     1021 cggggttacg ctgctgggtt tgacgacgat ggtgttgccc gttaccaaag cggggcccat
     1081 tttgcgggca atcaggaaga aggggaagtt ccacggcaaa atgccggcga ttacgcccag
     1141 cggacgtttg aacaataaaa tattttcgcg cgggcggtcg ctttggatga tttcgccttc
     1201 gtaacgacgc gcccattcgg cttggtaatc gagatagtcg gcggtaaaca tgacttccac
     1261 gcgcgccaag tctttggttt tgccgccttc ggcaacgatg gtgtcggtca gctcgtcggc
     1321 gcgtccgcgt atgccttggg cgattttgcg caaatacgcg ccgcgttcga ccgcaggcag
     1381 gcgttcccaa gccggttgcg ccgcgcgtgc cgccgccaca gctcggtcaa cgtctgcttt
     1441 tccgcctttg ggttcgcggg cgatggtttc ttcggtggat gggttcaata cgtcgcgcca
     1501 ttcgccgttg aaatcgtttt caaagcgtcc gttgatgtac atggccaatt gtttcatttc
     1561 gggttctcca gttttgtagt cagatgtagt cttagtttat tcccaaataa attgccgtac
     1621 aagtttcttt tgaaatgttt agacgagaag ctactatgtc tgcatattgt tctgctaatt
     1681 tatattcact cgaatgcaac tgccgattat tccaatctgc attcgcatca gtaaaagccc
     1741 cagcattgcc gcctgtggca taaccaatcg ctaaactgcc aacggtatcc acaacaggtt
     1801 tcaggctgcc tgaatttctc taataaatga aacacttatt ctatcagccg ttaatgtaac
     1861 caaacaatta tcaagataag agtagtttac taaatactca tcttcttcaa attgtatatt
     1921 ttgtagggtt agatgattat tttttaattc tgccgttatt tcatacttga aactatcatc
     1981 tatttttcta aatccaatat ttgaagttga tttatccagt atgtaatcat taaagatttc
     2041 ataggataat tccacttcat aaaattgatt ttcaaatatt ttgaatgggc agtacgatat
     2101 aaaacaatgt agttcataac catttatttc aatcaatact gcctcttcaa tggtgttatc
     2161 taactttttg attttacatt tatataacat ttatcttgcc tttggataaa ttgttttgtt
     2221 ttttggattg ttattcaaag ttctccaaaa gtcttttcct gattttgtat gtatcgtggt
     2281 aatactacca ttttcattgg ttccaacaaa aataaattta gattgacctt tggaatcagt
     2341 acccaaaaac tgaacatatc cagacatgcg gatttcgggt tttaaatcaa atgcggctta
     2401 ccggttttct tttttggttt ccgcaggcgt gctgccgaaa tattgcctga atgcctgagt
     2461 aaagctggaa acgtggcggt agccgcacaa atacgcggtt tcgcctatgc ttttgccccc
     2521 gttttgcaac aggtagagcg cgtgctgcat ttgtttgtgg tgcagccact cgcttgcggt
     2581 aatgccgaaa tggtcgcgca tacggcgttg cagcgtcctt tcgctgatgt tcagcgcgtc
     2641 tgccagccgg ttgacttggt gtgcgccgtc ggcaaacgcg gcatttaggg tgcggctgaa
     2701 gtcttcagac ggcatagcgt ctgcttccgc cgtttgcccc gccgccggcc cgatgccgtc
     2761 tgaaaccgtg tcccacaaat ccgacagcag ccgcaaaacg tccgcctcgc ggcgcaatgt
     2821 ttcgcccaaa tgcccctttg ggacggcttg caggcaggat gccgccaaac cgcgcaggtt
     2881 tggggacaaa ttccatattc tgaccggttc gcggtaaagt atgggtgtaa aacacgcata
     2941 ctccggacgc agcagccatt gctccatacc tttaattgtc attttgaccg ttttgccgcc
     3001 tcgataaaga tagcggctaa acaggacttc ttccccgact gaaatcagga tgaccttgcc
     3061 gccgtccgca tcgatttgga atcggctccg gttgatgccg aagttcaaag agccttccag
     3121 caaaagcacg aacgacacat aaggttcggc gaggcggctg ctgcaaaaat cgcaccgtgc
     3181 cgttaccgtg ccgccgtgga tggaaatgcc gttggacaaa gtatcgaaac ggtagctgcc
     3241 ctccatatag ctgccgccgc cgcttttgac cagattgacg aaccggctgc tgttcaaatg
     3301 ttctgctttt tccatagttt tctgataaag gttatcattt gaaagataac atttttcgcc
     3361 acagcaaaca atccgccgcc gacaacggca ttttcacaac acttaccgtc cgtatgccgt
     3421 ctgaaaattg cccgtcttcc cgataagcct taaaatacac gccgtcaaac ctaccgtccg
     3481 tccgtacatg agcccatccc cctttatcga aatgaaagac gtcgccttcg cgtatggcga
     3541 ccgcccgatt ctgaacgaca tcaatttcag tattccgcaa ggtaattttg ccgccgtgat
     3601 gggcggttcg ggcagcggca aaaccacgct gatgcgactg attacaggac agattcgtcc
     3661 gcagtccggg caggttttga ttgaaggacg tgatttgtcg ggcttttcgg ctgacgagtt
     3721 gtatgaacac cgccgccgta tgggcgtatt gttccaacac ggcgcgctgt ttaccgattt
     3781 gtctgtattt gacaatattg cttttccgat gcgcgaactg acgcaactgc cggaagcggt
     3841 gattcgagat ttggttttgt tgaaactgaa cgcggtcggt ctgcgcggtg tagaaaacct
     3901 gatgccgtcc gagttgtccg gcgggatgtc gcgccgcgtc gcgcttgccc gcacgattgc
     3961 gctcgacccc gaaattatgt tgtacgacga accgtttacc ggtctcgatc cgatttcctt
     4021 gggcgtgatt gcccacttga tcagccgcgt caacaaggct ttgcgttcga ccagtattat
     4081 ggtcacgcac gacattgaaa aatctttgga aatcgtcgat caggtgattt tcttggcgca
     4141 cggcgaaatt atgttctccg gctcgccgca ggaaatgcgc gaactggatt cgccttgggt
     4201 gcgccagttt gtcggcggct tggcagacgg ccccgtggca taccgttatc cggcgcaaac
     4261 gtcgttgcag caggatttgc tcgggtaaat gagccggtgc cgtctgaaac cgttgaactt
     4321 tacatataga aatttatgaa ctttatccgt tccgtcgggg cgaaaaccct cggccttatt
     4381 caatccctcg gcagtattac gctgtttctg ctgaacatct tggcgaaatc cggtacggct
     4441 ttcgtccgtc cgcgcctgag cgtgcgccaa gtgtatttcg ccggcgtgct gtcggtgctg
     4501 attgttgccg tttcggggct gttcgtcggt atggttttgg gtttgcaggg ttatacgcag
     4561 ttgtcgaaat tcaaatccgc cgatattttg ggctatatgg tcgcggcttc gctattgcgc
     4621 gagctgggtc cggtattggc agcgattttg tttgccagca gcgcgggcgg tgcgatgacc
     4681 agcgaaatcg gtctgatgaa aacgaccgaa cagctcgaag cgatgaatgt gatggcggta
     4741 aaccctgtcg cccgcgtggt tgcgccgcgc ttttgggcgg gcgtgttttc catgccgctt
     4801 ttggcttcga ttttcaacgt ggcgggcatt ttcggtgcgt atttggtcgg tgtaagctgg
     4861 ctgggcttgg acagcggcat tttctggtcg caaatgcaga acaacatcac gatacattac
     4921 gatgtaatca acggtctgat taaatccgcc gcgttcggcg tggcggtaac gctgattgcc
     4981 gtgcatcagg gcttccattg cgtcccgact tcggaaggca ttttgcgcgc cagcacgcgc
     5041 acggtggttt cgtccgccct gacgattttg gcggtcgatt ttatattgac cgcgtggatg
     5101 tttacagatt gacaggccgt ctgaagacga aacgcggaac atcggatatt caaggaactt
     5161 taatgaaaaa gaacatattg gaattttggg tcggactgtt tgtcctgctc ggcgtggcag
     5221 cggtcggctt tctcgctttc cgcgtggcag gcggcgcggc cttcggcaat tccggcaaga
     5281 cttataccgt atatgccgat ttcagcgaca tcggcggact gaaggccaac gcgccgatca
     5341 aatccgcagg cgtattggtc ggacgcgttg gttccatcga gcttgacccg aaatcctatc
     5401 aggcgaaagt ccgtctcgat ttggacagca aatatcagtt cagtagcgac gtttccgcac
     5461 aaatcctgac ttcgggactt ttgggcgagc agtacatcgg gctgcagcag ggcggcgaca
     5521 cggaaaacct tgctgccggc gacaccatct ccgtaaccag ttctgcaatg gttctggaaa
     5581 accttatcgg caaattcatg acgagttttg ccgagaaaaa tgccgacggc ggcaatgcgg
     5641 aaaaagccgc cgaataaacg tatgccatca tattcaaact aggacactta atcatgaaaa
     5701 aatcctccct catcagcgca ttgggcatcg gtattttgag catcggcatg gcatttgccg
     5761 cccctgccga cgcggtaagc caaatccgtc aaaacgccac tcaagtattg agcatcttaa
     5821 aaaacggcga tgccaacacc gcccgccaaa aagccgaagc ctatgcgatt ccctatttcg
     5881 atttccaacg tatgaccgca ttggcggtcg gcaacccttg gcgcaccgcg tccgacacgc
     5941 aaaaacaagc gttggccaaa gaatttcaaa ccctgctgat ccgcacctat tccggcacga
     6001 tgctgaaatt aaaaaacgcc aacgtcaacg tcaaagacaa tcccatcgtc aataaaggcg
     6061 gcaaagaaat catcgtccgc gccgaagtcg gcgtacccgg gcaaaaaccc gtcaacatgg
     6121 acttcaccac ctaccaaagc ggcggtaaat accgtaccta caacgtcgcc atcgaaggcg
     6181 cgagcctggt taccgtgtac cgcaaccaat tcggcgaaat tatcaaagcg aaaggcgtgg
     6241 acggactgat tgccgagttg aaagccaaaa acggcggcaa ataaccgaca aaccataccg
     6301 tccgagggcg gtatgggttt tccgagcaaa cgctatgcat acagaactca aaaacggaat
     6361 attgcacatc ggcggcgaca tcaccgtcaa aaccctgacc gccgccgctt ttacccgctt
     6421 cagacagcaa tgtcgtctga aagacacctg cgcggttgat ttgagcggcg tcggacgcgc
     6481 cgattccgcc tgcgtgtcgc tgctgctcga agtgctgcgc ggttgcaaag gcagcgtcag
     6541 gctgaccggc attcccgaat ccgtgcgcgc gctgtccgaa ctgtacgaaa tcaaagactg
     6601 gctgaaatca tgaaaaaaac cgcctatgcc ttcctcctgc tgatcgggtt cgcttccgcc
     6661 cctgcatttg ccgaaacccg ccccgccgac ccttatgaag gctacaaccg cgccgttttc
     6721 aaattcaacg accaagccga ccgctacatt ttcgcccctg ccgcgcgcgg ctaccgcaaa
     6781 gttgcgccga aacccgtccg cgccggcgtg tccaattttt ttaacaacct gtgcgacgtg
     6841 gtcagcttcg gtagcaatat cttgcgcttg gacatcaaac gcgcaagcga agaccttgtc
     6901 cgcgtcggca tcaacaccac tttcggtttg ggcgggctta tcgacatcgc cggcgcgggc
     6961 ggcattcccg acaataaaaa caccttgggc gacacgtttg cttcgtgggg atggaaaaac
     7021 agcaattatt tcgtgttgcc cgtcttaggg ccgtccaccg tccgcgacgc gctcggcacg
     7081 ggtattacct ccgtttattc gcccaagaat atcgtcttcc gcacccctgt cggacgctgg
     7141 ggcacgactg ccgtatccgc cgtcagtacg cgcgaaggtc tgctcgattt gaccgacagt
     7201 ctggacgaag ccgccatcga caaatacagc tacacgcgcg acctctatat gaaagtccgt
     7261 gcgcggcaga ccggtgcaac acctgccgaa ggtacggaag ataacatcga catcgacgaa
     7321 ttggtcgaaa gtgccgaaac cggcgcggcg gaaactgccg ttcaagaaga ttccgtatcc
     7381 gaaacacagg cagaagcagc aggggaagcc gaaacgcaac ctggaacaca accttaaagc
     7441 catgccgtct gaaaatccgt gttcggacgg cattcccttc tgtcggaacg gacagtccga
     7501 aaccacagat tgggctataa tctctttttt gcgcataccg cgcgacagca aaggaaaaac
     7561 catgtacgaa gtcaaccgca gcgtattcgt cctcatccct ttagaacctt tttggaactg
     7621 gctgcaaacc ctgccgggca accacctcga cggactgact cttgaagaca tccaagccga
     7681 cgccaattcc taccttgtcc gcccgtgcga aaccgccgac gaagtatggg acgaaatcga
     7741 agcccgtttt gaagacattt tcgccgccga acttgccgac tggtgcgaag acgaacgcga
     7801 gtggcctgcg ctcgatgccg acattttcaa cgaatggttc gacatccagc tttctaccgt
     7861 catcaccgac ctcgaacacg aaccgcttgc ccgcgaagcc ttccaaccca tcaacctgaa
     7921 ctgatgaagc tgaccgtccg caactaccat ctcgacggct acggccatgt caacaatgcg
     7981 cgctacctcg aatttttcga agaagcgcgc tgggcgtttt ttgaagaacg cggactgctg
     8041 cacgagttgg caggcctcat actgattgtc gcccgcatcg acatccgata cagccgcccc
     8101 gccgtcgaag gcgacgtatt gcagttttca tgccgcctga aaacccccgg cacgcgccgt
     8161 attgtgctga cccagacgat tacactgcca aacggcaaaa ccgccgcaga agccgacatc
     8221 accctgatgc ccgtccacgc cgccacacaa cgcaccgtca gcctgcccgc cacccttgcc
     8281 cgcgcattgg aagccttgtc cgaatgaaaa aaatactcac cgccgccgtc gtcgcactga
     8341 tcggcatcct ccttgccatc gtcctcatcc ccgacagcaa aaccgcgccc gccttctccc
     8401 tgcccgacct gcacggaaaa accgtttcca acgccgacct gcaaggcaaa gtaaccctga
     8461 ttaatttttg gtttccctcc tgtccgggtt gtgtgagcga aatgcccaaa atcattaaaa
     8521 cggcaaatga ctataaaaac aaaaacttcc aagtccttgc cgttgcacaa cctatcgatc
     8581 cgatagaaag cgtccgccaa tatgtcaaag actacggttt gccgtttacc gtcatgtatg
     8641 atgcggacaa agctgtcgga caggcgttcg gcacacaggt ttatccgact tctgtcctca
     8701 tcggcaaaaa aggcgaaatc ctcaaaactt atgtcggcga acccgatttc ggcaaactct
     8761 accaagaaat cgataccgcg ctggcacaat agcgatgccg tctgaagcgc aaaaaaaaca
     8821 gaaacgatgt tcctgttttt tcagatcatc cgccccgaca cgttcagacg gcattcaacc
     8881 ttccggcaga ttctttttca ccactgccgg attgcctgcc gccaaagagt agggcggaat
     8941 gtcttttgta accaccgcgc ctgcgcccac gaccgaaccg cgtccgacgg ttacgcccgc
     9001 cattacaatc accctgtgcc ccggccagac atcgtcctcc aacgtaatcg gacggatttc
     9061 cgtgtagccc tcaaagcgtt ttttgaacgg tcaaacttgt ggttatttga ataaaacaga
     9121 cattccggct ccatcatcac atttttgccg accaccagcc cacggcagat ttcacagttt
     9181 gccccgatgc ccgagccgtc gcccaaaacc gtatccggaa acacatacgc cccgcgttcg
     9241 atattgaccc cgcgtccgat atgcggagaa acccgccgcg ccaaaaaacc gcgcacccgt
     9301 ctgccgacga tgccgatgcc gcgcatatgt gacggcggca accccgaacc ggcaaaacgc
     9361 agcagcagga aaaagaattt tgatcccatc aaacctccct caaaagaac
//
LOCUS       DAWKOX010000068         9298 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.068, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000068 DAWKOX010000000
VERSION     DAWKOX010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9298
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.068"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(91..1371)
                     /locus_tag="WJK78_001160"
     CDS             complement(91..1371)
                     /locus_tag="WJK78_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ7598093.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            complement(1593..2213)
                     /locus_tag="WJK78_001161"
     CDS             complement(1593..2213)
                     /locus_tag="WJK78_001161"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ7598094.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="WJK78_001162"
     CDS             complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="WJK78_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ7598095.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALSGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            3352..3924
                     /gene="ampD"
                     /locus_tag="WJK78_001163"
     CDS             3352..3924
                     /gene="ampD"
                     /locus_tag="WJK78_001163"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ7598096.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            4118..5404
                     /locus_tag="WJK78_001164"
     CDS             4118..5404
                     /locus_tag="WJK78_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ7598097.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKLQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            5552..8077
                     /gene="ligA"
                     /locus_tag="WJK78_001165"
     CDS             5552..8077
                     /gene="ligA"
                     /locus_tag="WJK78_001165"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ7598098.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHICRLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVSNIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARRQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEHMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTVVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAEA
                     PAANQTQSVPLYKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETADKTVAESDQMPSEG
                     SSVGASGKHKKQPTKWAENILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPA
                     AQYAEPQRWIARLPGFKISENKAQALWELAGKSIEGLQTDKSLPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            8134..>9298
                     /locus_tag="WJK78_001166"
     CDS             8134..>9298
                     /locus_tag="WJK78_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ7598099.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALEGAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQ"
BASE COUNT         2180 a         2806 c         2347 g         1965 t
ORIGIN      
        1 ttgtcctgat ttttgttaat ccactatatc aatctgacag caaaatgccg cctgaaaaca
       61 gttcagacgg cattttaaac cgcaaacggc ttacagcttc cattcgctca gcttggcagc
      121 gtaagcttcc aaatctgcaa tcggacgggt tgccacgccg ctttccatcg ctgctttggc
      181 ggcagccgta gcaacgcgcg gcagcaggcg ggaatcgaac ggagtcggaa tcaggtattc
      241 cgcgccgaat tcaaatttct taccgtaagc ggcaaccact tcttcggtta cttcttccat
      301 cgccaaatcc gccaaagcat acacgcaggc gcgtttcatt tcttcgttga tggtcgtcgc
      361 gccgacatcc aacgcaccgc ggaagatgaa cgggaagcac aatacattgt tcacttggtt
      421 cgggaagtcg gagcggccgg taccgataac cacgtccgga cgggtttctt tcgccagcgg
      481 cggcaggatt tccggattcg ggttggccat ggcgaacacg atgggttttt cgttcatcgt
      541 gttcaacatt tcgggggtca gcaggttcgc gccggagagg cccaagaaga tgtctttacc
      601 tttgacggca tcggcaagta cgcgctggcc attgtcttca acggcgtaga attttttgga
      661 ttcgtccatg cggtctttgt cttcgcgggt ttggtaaatc acgcctttgg agtcgcaaac
      721 ggtcacgttt tcgcgtttca agcccaaatc cagcaattgg ttcaagcagg caatcgcggc
      781 cgcacctgcg ccggaacaca ccaaagtcgc ttcttcgatt ttacggccgg taaaacgcag
      841 ggcgttcaat acggcggcgg cggtaatgat ggccgtgccg tgctggtcgt cgtggaatac
      901 ggggattttg cagcgtttgc gtaattcgcg ttcgatgtag aaacactcgg gtgctttgat
      961 gtcttcgagg ttgatgccgc cgaaggtcgg ctctaaagcg gcgatgatgt ccacgagttt
     1021 ttgcgggtct ttttcatcga tttcgatgtc gaacacgtcc acaccggcga attttttgaa
     1081 caatacgcct ttaccttcca tcacgggttt gcccgccagc gcgccgatgt cgcccaagcc
     1141 caaaacggcc gtaccgttgg aaatgacggc gaccaagttg cctttggcgg tgtatttgta
     1201 ggcattttgc ggatcggcat ggatttccat acaaggagcg gctacgcccg gagagtacgc
     1261 caacgccaaa tctttgtcgg tcgccaaaga tttggtcggg gtaacggaaa ttttgcccgg
     1321 aacgggtaat tcgtggaact tgagggcggc ttctttcaat gagttttcca tgtgtcaatc
     1381 ctgttgcgag aaaaagattt gaatcggact gtccgaaacg ctttcgggtc atcatgttac
     1441 gggcggttcg ttaatattgc cgacgcatcc tgccttgtaa ccgagcgtaa ttctatcatg
     1501 ccgaaagttt ggcgcatacc gccattttca cctgcggcac tgccgtttga ttttcggcgc
     1561 gggtggatgc gcttgtttca atatttgccg cattaacagc cgaaatgtcc gtccaacact
     1621 ttttctatgt tgtttctgac ttcatccaag ctgcggttac tgtcgataat ggcgtaccgt
     1681 tcgggacagg cggcggcacg gttcagataa acgctgcgca cacgcatgaa gaaatctgcc
     1741 tgttcctgct cgaaccggtc tttctcgcgc gactgtccga tacgcgccat cgacacttcc
     1801 agcggcacat ccaacagcag ggtcaaatcg gggcgcaaac cgccctgcac ccaatgttcc
     1861 aaaatttcaa tgtcttcaga cggcatcccc cgcccgccgc cctgataggc gaaggttgcg
     1921 tcggtaaaac ggtcggacac gacatggatg ccgtctgaaa gtgcaggcaa tatcacgtct
     1981 tcaatatgct gcattctggc ggcgaacatc atcagtgttt ccgcacgcaa accggctttg
     2041 gtttcagggt tgagcaggat ttcgcgcaag gcctcaccga ccggcgttcc gcccggttcg
     2101 cgcgtgaaca gcacgggcag ccccctccgt tcaaaccatg ccttgatgac ggcaaggttg
     2161 gtggatttgc cggcaccgtc tatgccgtcc aaagtgatga attgcggttt catgcttgca
     2221 gttccggtaa gggtatgccg tccgaaaaca caaacttttc agacggcatg gtttattttt
     2281 tcaaaatata tttgcgaacg gcggcgttgt gttcggtcaa atcatggctg aactggctca
     2341 agcccgtacc gtccattttg gacacgaaat acaggtattt ttcaccggac ggatgggcgg
     2401 cggcatcgag tgccgccttg ccggacagcg cgatcggggt tggcggcaga ccgccgcgcg
     2461 tgtaggtgtt gtacggcgtg tcgcggcgca ggtcggcttt acggattttg cccttgtatg
     2521 ccgcacccat gccgtaaatc acggacgggt cggtttgcag gcgcataccg attttcaggc
     2581 ggttgacgaa gacggaagcg acatggtcgc ggtcggcttc atgccctgtt tccttttcga
     2641 tcaggctcgc cataatcagc atttcataag ggtttttata aggcagcccg tcctgcctgc
     2701 tttcccatgc ctcattcagt cggcgttgca tcgccttgta ggcgatttgg taaatccgta
     2761 aatcgctgcc gcccgcatcg atttcgtagc tgtcggggaa aaactgccct tcaggattgc
     2821 cgctgaaggc atcaggggca acttccgcca tcagtttttc attgctccag cctttggtgt
     2881 cgtgttcgat gtcgggcgtt gcgtcgatga ctttcctcat atgcgaaaaa cgcgaacctt
     2941 cgataatctg cacggtaacg gaatccggcc tgccgccgcg cattttctgc aagatatccc
     3001 aagcagacac ttccgaaggc agtctgtacg tccccgtatg cagcctgttg tgcacaccca
     3061 aaacgtaggc cgccgccgtc aaaacatgcc tgctgaacac gatgcggtct tcggcaagtt
     3121 tcctgccgac cgacgaaata ccctggtttt tggcaatttt aatcctgtat gccctgccgt
     3181 tgtctttagg gacgaaaagc agcgcggcga aaacggctgc cgatacggtc aaaaaaacgg
     3241 cagaccattt caacaatttt ctcaacatgg taggattccc agcattcgga atacgtctta
     3301 aaattcgggc gacagtataa cccaaattgc ccgccggaca ggaagaacat catggacaat
     3361 cacgccgaag cacactggca aaacggctgg cttcaaagca tacgccatac cccgtcgccc
     3421 aatttcagcc cgagggaaac gggggaaacg gtttccctga tcgtgttgca caacatttcg
     3481 ctgccgccgt tcgaatatgg tacggatgcg gtggaaaagc tgtttgccaa ccggctcgac
     3541 cccgacggac atccgttctt cagcctgata cacactttgc gcgtatccag ccatttttta
     3601 atcaaacgcg acggcgaaac ggtacagttc gtttcctgcg acaatatggc ataccatgcc
     3661 ggcgtatcct cgtttcgcgg acgggaaaaa tgcaacgcat tttccatcgg catcgaactg
     3721 gaaggctgcg atttcgaacc ctttaccgaa gcgcaatacc gttcgctcga agccttgttg
     3781 gacgcaatct gccgccgcta ccccatcacg gcggtaacgg ggcaccaaga catcgcgccc
     3841 ggccgcaaaa ccgaccccgg tcattttttc gactggcggc ggatacgggg gaaagggttt
     3901 cccgtggaca gaaatgccgt ctgaaaacca cagattttag acggcatttc ggaaaatttc
     3961 cgcttatttc gacacactgc tgtcagaccc tgcaattttc gttataattc aaacgttata
     4021 accggccgtt ccatcagact gccggaaacg caagcccgat ttaaccgcag tacccgcact
     4081 tcgcgcatcc tgcatcccga aatttaaagt gattgccatg atttacatcg tactgttcct
     4141 cgccgccgtc ctcgccgttg tcgcctacaa tatgtatcag gaaaaccaat accgcaaaaa
     4201 agtgcgcgac cagttcggac actccgacaa agatgccctg ctcaacagca aaaccagcca
     4261 tgtccgcgac ggcaaaccgt ccggcgggtc agtcatgatg ccgaaacccc aaccggcggt
     4321 caaaaaaacg gcaaaactcc aagaccctgc tatgcgcaac ctgcaagaac aggatgccgt
     4381 ctacatcgcc aagcagaaac aggcaaaagc ctccccgttc aaaaccgaaa tcgaaaccgc
     4441 cttggaagaa agcggcatta tcggcaactc cgcccacacc gtttccgaac cccaaaccgg
     4501 acattccgca ccgaaacctg ccgacgcgcc ggcaaaacct gcacccgttc cgcaaacacc
     4561 tgcaaaaccg ctgattacgc tcaaagaact gtcaaaagtc gaattaccct ggtttgacgt
     4621 gcgcttcgac ttcatctcct atatcgcgct gaccgaagcc aaagaactgc acgcactgcc
     4681 gcgcctttcc aaccgctgcc gctaccagat tgtcggctgc accatggacg accatttcca
     4741 gattgccgaa cccatcccgg gcatccgcta tcaggcattt atcgtgggta ttcaggcagt
     4801 cagccgcaac ggacttgcct cgcaggaaga actctccgca ttcaaccgcc aggtggacgc
     4861 attcgcacaa agcatgggcg gtcagacgct gcacaccgac cttgccgcct ttatcgaagt
     4921 ggcttccgca ctggacgcat tctgcgcgcg cgtcgaccag accatcgcca tccatttggt
     4981 ttccccgacc agcatcagcg gcgtagaact gcgttccgcc gtaacgggcg tgggtttcgt
     5041 tttggaagac gacggcgcgt tccactatac cgacacgtcg ggctcgacca tgttctccat
     5101 ctgctcgctc aacaacgagc cgtttaccaa cgcccttttg gacaaccagt cctacaaagg
     5161 cttcagtatg ctgctcgaca tcccgcactc tccggcaggc gaaaaaacct tcgacgattt
     5221 gtttatggat ttggcggtac gcctgtccgg ccagttgaac ctgaatctgg tcaacgacaa
     5281 aatggaagaa gtttcgaccc aatggctcaa agacgtgcgc acttatgtat tggcgcgtca
     5341 gtccgagatg ctcaaagtcg gtatcgaacc gggcggcaaa accgcattgc gcctgttctc
     5401 ctaaaatcga atgcaatcaa agcggatatg tcgttacggc atatccgctt tttttcgggt
     5461 aaaattcagc tgttttcaac ctatcatttt tcagacgacc tttgcccgtt tcatcccgta
     5521 tcagacaaag gtcgtctgaa aaccttctct catgaatcca aactcaaaac ataacactaa
     5581 ctttaccaat cttcttaaac cgtctgatag tgatataaaa caatttgccg cacaacacat
     5641 ctgccgcctc accgacctcc tcaaccgcta cgcctacgaa tactacaccc tcgacgcgcc
     5701 cagcgtaccc gatgccgaat acgacaaatt gttccgcgaa ctcgaagcgt tggagttaaa
     5761 ccatcccgag ctcaaactgc ccgacagccc gacccagcgc gtcggcggcg agcctttggc
     5821 gggatttgcc gaagtacgcc acgaagtgcc gatgctgtcg ctgaccaacg ctttttcccc
     5881 gcaagatgaa aacggcgtgt tcgaccatgc cgaaatgtac gccttcgacc aacgcgtgcg
     5941 cgacggcttg gacggcggca atcccgaata cgttatcgaa cccaaattcg acggcctcgc
     6001 catcagcctg ctctaccgcg acggcgtatt ggtgcaggcg gcaacgcgcg gcgacggcac
     6061 gacgggcgaa gacgttaccc aaaacatcaa aaccgtatcc aacatcccct tgcggctgca
     6121 cggcgaaaat acgcccgaac tcatcgaagt acgcggcgaa gtactgatgc aaaaagccga
     6181 ttttgccgcc ctcaataaaa gacaagccga aaacgggcaa aaaccctttg ccaatccgcg
     6241 caacgccgcc gccggcagcc tacgccaact cgattcgcgc atcactgcgc aacgcaaact
     6301 gcactttttc ccctactccg tcgcccgccg gcaaggcggt ttcgtcgcgg aagaacacat
     6361 ccaagaactc gcctatttcc aagcactcgg cttcagtctg cccaatggca atttcggctg
     6421 tttcaaaaat atcgacgaag tattggcgtt ttacgaacac atgcagcaaa aacgccccga
     6481 actgccctac gaaatcgacg gcatggtggt taaagtcaac agcctggcgc aacagcgcga
     6541 actcggcttc atctcccgcg cgccgcgctg ggcgattgcc cacaagttcc ctgccgaaga
     6601 agccctgacc gtcgtcgaag cgattgacgt gcaaatcggc aggacgggcg cggtaacgcc
     6661 ggttgcccga ttacaacccg tattcgtcgg cggcgtaacc gttaccaacg ccaccctgca
     6721 caatcaggac gaagtttccc gaaaagacgt gcgcgtcggc gataccgtcg tcgtgcgccg
     6781 cgccggagac gtgattcccg aagtcgtgcg tgtgattttt gaacgccgcc cgatgcagga
     6841 aaccgccgtt gctgtttcag acggcatcgg gcatcggcag gacgatttgt ttgccgaagc
     6901 accggctgca aaccaaaccc aatccgttcc gctctacaag ccctaccgcc tgccgaccca
     6961 ttgccccatc tgccgcagcg aaatcgaacg cgaagaaggc gaagccgtcg cccgatgcag
     7021 cggcggtatg ctttgtcagg cacaacgcgc gcaaggctta atccacttcg cctcgcgcaa
     7081 agccatggac atcgacggct tgggtgaaaa acaaatcgaa cagcttgtcg cccaagacct
     7141 cgtccgccac ttcgccgacc tctaccgcct cgatattccg accctgcaaa aaatgaagga
     7201 aacggcggac aaaaccgttg ccgaatcgga tcaaatgccg tctgaaggca gttcggtcgg
     7261 tgcgtcgggc aaacataaaa aacaaccgac caagtgggcg gaaaacatcc tcgcaggcat
     7321 agaatccggc aaaacgcccg aactcgcgcg cttcctgttc gcgctcggca tccgccacgt
     7381 cggcgaacgc accgccaaaa cgctggcaca ggcattcggc acattggaac gcgtccgccg
     7441 cgcccccgaa cccgtcctcg cctgcctgcc cgacatcggt acggtagtgg cgcgttccat
     7501 tgcccacttc ttcgcccaag ccgaacagca ggcgatgata gacgagctgc tcgccgcagg
     7561 cgttgccccg caagcccaag ccgtcagcct gcctgccgca caatatgccg aaccgcaacg
     7621 ctggattgcc cgcctgcccg gtttcaaaat tagcgaaaac aaagcccaag ccttatggga
     7681 actcgccggc aaaagtatag agggtctgca aaccgacaaa tccctccccg ccgactggca
     7741 agcatggcgc agcgaaccac aaaacgccgc cctactcgaa aacctgaaaa ccttcttcgc
     7801 gcaaatgccg tctgaagacg aggcggcgca aggttcagac ggcatcaata aagccgtagc
     7861 gggcaaaacc ttcgtgttaa ctggcacact gcccaccctc aaacgcgacc aagcccaatc
     7921 cctaatcgaa gccgcaggcg gcaaagtttc cggcagcgtg tccaaaaaaa ccgattacgt
     7981 cgtcgccgga gaagccgcgg gcagcaagct ggaaaaagcc aatgccttgg gcgtttccgt
     8041 cctcagcgaa gccgaactgc ttaccctgct cggctgaacc catgccgtct gaaccgcctt
     8101 cagacggcat tgcccacttt tccgaaccac accatgcaca ccatttcctt tccaaaccgc
     8161 acccgactca ccgccctgcc gcccctgtcg ctttacatcc acatcccgtg gtgcatcaaa
     8221 aaatgcccgt attgcgactt caattcccac agcctgaaaa acggattgcc cgaagccgcc
     8281 tatatcgacg cgctgctgac cgatttgcag cttgaattgc ccaatatttg gggcaggccg
     8341 gtggaaacga tctttttcgg cggcggtacg cccagcctgt ttcaggcgga atcgattgac
     8401 cgtttgttaa gcggcgtgcg ttcgctgttg cgcttgcagc cggaagcgga aattaccttg
     8461 gaagccaatc cggggacatt tgaaatcgag aagtttcaag gatttaaaga cgcgggtatt
     8521 acgcggcttt ctatcggcgt acagagtttc aacgacgata tgctctcaag gctggggcgc
     8581 gtccacaacg gtaaggaagc cttaaccgct atcgataccg ccttgaaatt atttgataaa
     8641 gtcaatatcg acttgatgta tgccctgccg aaccaaaccg ttcagacggc attggacgac
     8701 gtacaaaccg ctatcgctac gggcgcgacc cacatcagcg cgtatcatct gacgatggaa
     8761 ccgaacacgc cgttcggtca tacgccgccg aaaggtttgc cgcaagacga agccgccctc
     8821 gacatcgaag acgcggtaca cggcgcgctg gaaggcgcgg gttttgtcca ctacgaaaca
     8881 tcggcttttg cgaaaccagc catgcagtgc cgccacaatt tgaactactg gcagttcggc
     8941 gattatttag gcataggcgc gggcgcgcac ggcaaaattt cctatcccga ccgcatcgag
     9001 cgcaccgtcc gccgccgcca ccccaacgac tacctcgcct taatgcaaag ccaaccgagt
     9061 gaagccgtcg aacgcaaaac cgtcgctgcc gaagatttgc cgttcgaatt catgatgaac
     9121 gccctgcgcc tgaccgacgg cgtacccgcc gcgatgttgc aggagcgcac gggcgtaccg
     9181 agtgccaaaa tcatggcgca aatcgaaacg gcaaggcaaa aaggcctgct ggaaaccgac
     9241 cctgccgtat tccgcccgac cgaaaaagga cgcttgtttt taaacgattt gctgcagt
//
LOCUS       DAWKOX010000069         9291 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.069, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000069 DAWKOX010000000
VERSION     DAWKOX010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9291
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.069"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(77..178)
                     /locus_tag="WJK78_001167"
                     /pseudo
     CDS             complement(77..178)
                     /locus_tag="WJK78_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
     gene            complement(376..2487)
                     /locus_tag="WJK78_001168"
     CDS             complement(376..2487)
                     /locus_tag="WJK78_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7598100.1"
                     /translation="MKISFHLALLPTLIITSFPVAAADTQDNGEHYTATLPTVSVVGQ
                     SDTSVLKGYINYDEAAVTRNGQLIKETPQTIDTLNIQKNKNYGTNDLSSILEGNAGID
                     AAYDMRGESIFLRGFQADASDIYRDGVRESGQVRRSTANIERVEILKGPSSVLYGRTN
                     GGGVINMVSKYANFKQSRNIGAVYGSWANRSLNMDINEVLNKNVAIRLTGEVGRANSF
                     RSGIDSKNVMVSPSITVKLDNGLKWTGQYTYDNVERTPDRSPTKSVYDRFGLPYRMGF
                     AHRNDFVKDKLQVWRSDLEYAFNDKWRAQWQLAHRTAAQDFDHFYAGSENGGRIKRNY
                     AWQQTDNKTLSSNFTLNGDYTIGRFENHLTVGMDYSREHRNPTLGYRGSFTVPINPYD
                     RASWPASGRLQPILTQNRHKADSYGIFVQNIFSATPDLKFVLGGRYDKYTFNSENKLT
                     GNSRQYSGHSFSPNIGAVWNINPVHTLYASYNKGFAPYGGRGGYLSIDTLSSAVFNAD
                     PEYTRQYETGVKSSWLDDRLSTTLSAYQIERFNIRYRPDAQNNPYTWAVGGKHRSRGV
                     ELSAIGQIIPKKLYLRGSLGVIQAKVVEDKENPDRVGIHLNNTSNVTGNLFFRYTPTE
                     NLYGEIGVTGTGKRYGYNSRNKEVTTLPGFARVDAMLGWNHKNVNVTFAAANLFNQKY
                     WRSDSMPGNPRGYTARVNYRF"
     gene            complement(2673..3278)
                     /locus_tag="WJK78_001169"
     CDS             complement(2673..3278)
                     /locus_tag="WJK78_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ7598101.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEVVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLATVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(3327..3725)
                     /locus_tag="WJK78_001170"
     CDS             complement(3327..3725)
                     /locus_tag="WJK78_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ7598102.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            3833..4744
                     /locus_tag="WJK78_001171"
     CDS             3833..4744
                     /locus_tag="WJK78_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ7598103.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTGAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            4734..6035
                     /locus_tag="WJK78_001172"
     CDS             4734..6035
                     /locus_tag="WJK78_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ7598104.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCAAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAAAHKTDPDGT
                     FVRRHIPELAHLSADTVHTPWRFACSVDTHGYPAHPVAGIP"
     gene            complement(6103..6327)
                     /locus_tag="WJK78_001173"
     CDS             complement(6103..6327)
                     /locus_tag="WJK78_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598105.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVSAWVAVIWAYLMIESEKNGRY"
     gene            6430..8580
                     /gene="dinG"
                     /locus_tag="WJK78_001174"
     CDS             6430..8580
                     /gene="dinG"
                     /locus_tag="WJK78_001174"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ7598106.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELSFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNMAVWTLEKLPQLTGKIAALTDKAELANLADEAASSLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGDFGIFIARIEQISAVWDLLSTVPIEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            8616..9230
                     /locus_tag="WJK78_001175"
     CDS             8616..9230
                     /locus_tag="WJK78_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ7598107.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGQATVTQSDFQPAGETEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT         2153 a         2746 c         2430 g         1962 t
ORIGIN      
        1 gttttaggca attgaaaatt ttttggcgca tttttatgcg tcaaatttcg ttaacagact
       61 atttttgcaa aggtctcaaa tcagcaattc tttttgcatc gtgtggattt tgagacaggc
      121 ctaatgaccg tacccgctta ataaaaaatg caccgtcaag caaaatggcg gttttcatat
      181 tgcttcccct atatttgtca aagatataaa aaagcccttg ggatcggcat acccgctatg
      241 atttaatggg taatgcgtac tgccaagggc actatttctt tttggattat actgatgtag
      301 ataaagcctg tcaaaaagtt cgtatgctga atttacggat tatcaggatt ttcagacggc
      361 ctttgcctga tttcatcaga aacggtaatt tacccgggca gtatagccgc gcggattacc
      421 cggcatagag tccgaacgcc aatatttttg attgaacaga ttggctgcgg caaaggtaac
      481 gttaacattt ttatggttcc agccaagcat ggcatcaact cgggcaaagc ctggaagcgt
      541 agtcacttct ttatttcttg agttgtaacc gtagcgtttg cctgtaccgg ttacgccgat
      601 ttcgccgtag aggttttcgg tcggggtata acggaaaaac aggttgccgg taacgttgct
      661 ggtattattc aaatggatgc ccactcggtc gggattttct ttgtcttcaa cgactttcgc
      721 ctgaatcacg cccaacgaac cgcgcagata gagttttttg gggatgattt gcccgatggc
      781 ggacaattcc acgccacgcg aacggtgttt gccgccgact gcccaagtgt agggattatt
      841 ttgtgcgtcg gggcggtagc ggatattgaa gcgttcgatt tggtaggcgg acaatgtagt
      901 gctgaggcgg tcgtccagcc aactgctttt cacgccggtt tcgtattggc gggtgtactc
      961 ggggtcggcg ttgaacacgg cggaagacaa cgtatcgata ctcaaatagc cgccgcgtcc
     1021 gccataaggc gcgaagcctt tgttatacga ggcgtaaagt gtgtggactg ggttgatgtt
     1081 ccacactgcg ccgatgttgg ggctgaacga gtgtccgctg tattggcggc tgttgccggt
     1141 gagtttgttt tcggaattaa aggtgtattt gtcgtaacgg ccgccgagga cgaatttcaa
     1201 atcgggcgta gcggagaaga tgttttgcac aaagatgccg taggagtcgg ctttgtggcg
     1261 gttttgggtc agaataggct gcaatctgcc cgaagccggc cagcttgcgc ggtcgtaggg
     1321 gttgatgggc acggtgaaac tgccgcggta gcccaatgtc gggttgcggt gttcgcggct
     1381 gtaatccatg cctacggtca ggtggttttc aaaacggccg atggtgtagt cgccgttgag
     1441 cgtgaagttg gacgacaggg ttttgttgtc ggtctgctgc caggcgtagt tacgtttgat
     1501 tcggccgccg ttttcgctgc ctgcatagaa atggtcaaaa tcctgcgccg ccgtgcggtg
     1561 ggcgagctgc cattgggcac gccatttgtc gttgaaggcg tattcaaggt cggaacgcca
     1621 aacttgcagc ttgtctttga caaaatcgtt ccggtgggcg aaccccatgc ggtaaggcag
     1681 tccgaagcgg tcgtacacgg acttggtcgg gctgcggtcg ggcgtgcgct ccacattgtc
     1741 gtaggtgtat tgccccgtcc atttcaagcc gttgtcgagt ttgacggtaa tgctgggcga
     1801 aaccatgacg tttttgctgt ctatgccgct gcggaacgaa ttggcgcgcc cgacttcgcc
     1861 ggtgaggcgg atggcgacgt ttttgttcag cacttcgtta atgtccatat tcaggctgcg
     1921 gtttgcccac gaaccgtaaa ccgcaccgat gttgcggctt tgtttgaagt tggcgtattt
     1981 gctgaccatg ttgatgacgc cgccgccgtt ggtgcgtccg taaaggacgg aagacgggcc
     2041 tttcaggatt tccacgcgct cgatattggc agtactgcgg cgcacttgtc cgctttcgcg
     2101 cacgccgtcg cggtaaatat cggatgcgtc ggcttgaaaa ccgcgcagga aaatgctttc
     2161 gccgcgcata tcgtaggcag cgtcgatgcc ggcattgcct tcgaggatgg aactcaaatc
     2221 gttcgtgccg taatttttgt ttttctggat attgagcgta tcgatggttt gcggcgtttc
     2281 tttgatgagc tgtccgttgc gggtaacggc ggcttcgtcg tagttgatgt agcctttgag
     2341 tacgctggtg tcggactgtc cgaccacgga aacggtaggt agcgtggcgg tgtaatgttc
     2401 accattgtcc tgcgtatcgg cggcagcaac agggaaggaa gtaataatca gcgtgggtaa
     2461 taaagctaaa tgaaatgata ttttcatttt tatactcaat ttaacaaaac aaccgaatta
     2521 tattgcctca cggaggaaat gagaataatt tcttttaact atattgaaca tgatatttgt
     2581 aaacaaaggt ctcagaatgc ggaaaactcg ccgcctgata ctgaaaaatg ccgtctgaac
     2641 agggttcaga cggcattttt ttgaccgcga aattatgcgc cgaacacttt caaacgttct
     2701 gcaactggtt caaaggtctt ttcacctgcc gccccttcaa taccgccgat aaccatttgt
     2761 gcgcgcaaca gccagttttc gggaatattc cacgctttgg caatcgccgc atcgggcaag
     2821 gggttgtaat gttgcaggtt tgcacctacg ccgaccgtgg caagtgtcgt ccagacggca
     2881 tactgtacca tcgcgttcgc ctggtccgcc caaacgggaa agttggcggc ataagcaggg
     2941 aactgctcct gcaaaccttt gacgacattt tgatcttcat aaaacaaaat ggttgccgca
     3001 cccgccttaa acaggttcaa tttttgcgcg gtcggttcaa aactgtcggc aggcacgacg
     3061 gcacgcagcg cgtcttcgac aaattgccac accttatcat gctcttcgcc aaacagcacg
     3121 accacgcggg cagattggga attgaacgaa gaaggtgtgt gcaaaacggc gtgttcgacg
     3181 atttggacaa cttcatcttt gccgacgggc agatttttat ttaacgaata aatggaacgg
     3241 cggctttcgg cagcctgttg cagagattga cgggtcattt cttttcctca aaaacattca
     3301 acaaaataca ctttaggcag tccgattcag gctttacgct tgaaaaacag cctgtccagc
     3361 gaccatgctc cgccgcccgc cgccgcgata tagaggaata cgaagcagaa cagcactgcg
     3421 gactcgccgc cgttggcaat cgggaacaaa gcatttccgg aagcgtgcgc cataaaatag
     3481 gcaaccgcca tctggccgga caaaacaaac gcggcagggc gcgcaaacag gcccaacacc
     3541 agcaaaatgc cgccgacaat ttctaaaata ccggcaagca gcaacagccc gccgggcgaa
     3601 ccgctgccca tttcaatggg gaaggcgaag attttcgacg taccgtgcaa caaaaacagg
     3661 taggcggtta cgatacgcaa aacagaaagc aaaaccggtt ggatacggtt gcagcaatcg
     3721 gacataaaag ctcctttgat atttgtcttc atttcaggcg gtagagtata gatgtttccc
     3781 cttttcaaat atatactgct tttattgata caacttttcc acacaagaaa atatggacac
     3841 cctgttcagc ctcaaggttt tccgccaagt cgtccaaagc ggcggcttca cccgcgccgc
     3901 cgacgcgctc ggcatctcca ccgcaatggc aagcaaacac gtcagccact tggaaaacac
     3961 cgtccaagcc aaactcctgc accgcaacag ccgcaacctc agcctgaccg gagccgggga
     4021 agaatactac cggcaatgca gttacgcgct cgacacgctc gacgatgccg cgcaaaaagc
     4081 cgccggaggg acggaaaaac cgcaggggct gctgcgcgta acgatgccgc tgtggtttgc
     4141 cggcagccag atatgcaact ggctggcgga ataccgcgaa cgttatcccg aagtggcatt
     4201 agaactgatt ttggacaacc gccacgtcga tttgattgcc gaaggcgtgg atttggcgtt
     4261 gcgcgtttcc caaaccctgt ccccgtcgct gattgcgcgc ccactggcgg aaatcgaatt
     4321 tgccctgctc gcctcgcccg atttcctgag gcgcaacggc gtgccggaaa cgccggaaga
     4381 agtggcgggg ctgcccgccg tcctgccgac ctacaccaac cagcagaaac tcgacctcac
     4441 ccgcaaatcg gacggcaaaa aataccggct tgaactgacc cccgtcatcc gtaccgacaa
     4501 cacgctgatg atgcgcgaaa tgattaaggc gggcgcgtgc atcggttatc agccgctttg
     4561 ggcggcggaa cacgatttgc gctgcggcac gctggtgagg ctgctgcccg gatacgccgt
     4621 cccgaccgac cggctgaatg ccgtttatgc agacagggca ttcttaagcg cgaaagtccg
     4681 cagcttcatc gattttctga acgaaaaaat cgccagcagg aaaggctgcc gaaatgccgt
     4741 ctgaaaccgc ccgccccctt tatgcggaca cgtgcgccgc acacacgctc gtctggttcc
     4801 gccaaaacct ccgcatccgc gacaacgccg ccttatgcgc cgccgttgcc gaaggtttgc
     4861 ccgttatcgg tatttggatt gacgatgccg aaacagacaa ccctcgccgc gccgcgttct
     4921 accgccaatc cgccgccgaa ctcgcccaag ggcttgcagg gcgcggcatc ccgctctaca
     4981 cggcggcgtc gcctgccgag ctcgtccggc tcgccgtccg cctcaatatc cgcgccgtca
     5041 tcgccgacga atcccatact tttgccgaca aactcgccga caacgccctt tggcatgaat
     5101 tggacaaaca cggcatcgcg ttaaccttcg tcaatgaccg cgccgttttc ggcaaaaccg
     5161 acctgatacc cgacggcggc acggcacaca ccgatttcga ccgctaccgc gaagtatggc
     5221 tcgaccgctt ttccaagcag ccccccgccg gtccggacct attcgcggca taccgccaac
     5281 ccttccccga aaacctttcc gccccgccgc ctgccgccct ttcagacggc atcttcctgc
     5341 cgcaaaacag cggcgaaacg gcggcttggc ggcagtggcg gcggtttctc gaacaggcgg
     5401 attcctactc cgttttaaag gatttcccct cgcgcaaaca cacttcgctg atgggcgcgt
     5461 atttgagtgc cggctgcatc tcgccgcgcc tgctcgcgcg ggaaagcctc gaacgccgtc
     5521 tgaacgcgtg ggcggacaac atcatccgcc gcgatttttt ccttcaactt gccttgcagc
     5581 acacggatga cgacccttca gacggcaatc ctgaacacac cctgcgcctg acgctttggc
     5641 agcagggccg gaccggcatt ccgattatcg atgccgcgat gcgctgtttg cacaaaaccg
     5701 gcagcctcca ccccgccctg agacgcttga gcgcggattt tttctgccac gttttaaacc
     5761 tcccccgccg cgaaggcgag atatggtttg cccggcagct gaccgatttc gatgcggcaa
     5821 tcaaccaagg caactggtgg cttgccgcct cacggcacac ctgccccgac attgccgccg
     5881 ccgcacacaa gaccgacccc gacggcacct ttgtcagacg gcacattccc gagcttgccc
     5941 acctgtccgc cgacaccgtc cacacgcctt ggcggtttgc ctgttcggtc gatacccacg
     6001 gctatcccgc ccatcctgtc gccggtattc cctaagcggt acggcaacct aaaacaaatg
     6061 ccgtctgaac ttccgtttca gacggcattg cgtccgaatg actcaatatc ttccgttttt
     6121 ttcactttca atcatcaggt atgcccaaat caccgccacc caagccgaca ccgttcccat
     6181 cgccggcaaa aaatgctgcc aatccgtcat cggcggcaca gggcaacggc cgcattcgat
     6241 ttccgcgccg cccaacaacc ggtacagcaa catatccgca atccaaagca acaacgggta
     6301 tttcaaacgc tgcaaccaaa aaaccaacca cgtccgcacg attcacctca ccccccattc
     6361 cgacaacgat attgtaccgc ttccgtgcaa tgttaaaata agcccacttc taccgccgta
     6421 caaaacgcca tgctcaccga tttagaaaaa aacgccatcc gcgaccatta ccaaaacatc
     6481 ggcaaaaacc tgcccggttt ccgtccgcgt gcttcgcagc gggaaatgat tgcggcggtt
     6541 gccaacgctt tttcgcggac gttggcgcgc gaagaaggcg gcgagccgcc caagcgcgag
     6601 ggcgagagca tcgccgtaat cgaagggccg accggcgtgg gcaaatcgct tgcctacctg
     6661 ctggcgggcg gcatcatggc gcagacgcgc ggcaagcggc tgattgtgag cagcgcaacg
     6721 gttgccttgc aggagcagtt ggtagaccgc gacctgccgt ttttggtcga aaaaagcggt
     6781 ttggaactga gcttcgcgct tgccaaaggg cgcggccgct atctctgccc ctacaaactc
     6841 tatcaactga cgcaaagcaa tgcccagcaa aacctgctcg gctttgaagc ccccgccgtc
     6901 ttgtgggaca gcaaacccaa gcccgaagaa ttgaagctgc tgcgcgacat tgccgacgaa
     6961 ttttctgccc gacggttcaa tggcgaccgc gacgcctggc cggaaaaaat cgacgacgcg
     7021 atttggctca aagtgaccaa cgaccgccac ggctgcctga aaaccgcctg tcccaaccgt
     7081 ccggaatgtc cgttttacct ggcacgcgat gtcttggaaa ccgtcgatgt cgtcgttgcc
     7141 aaccacgatc ttctgcttgc cgacatcagt atgggcggcg gcgtgattct gcctgcgccc
     7201 gaaaacagtt tctattgcat agacgaagcg caccacctgc ccaaaaaagc cctcagccgt
     7261 tttgccgccg aacattcatg gaatatggcc gtttggacgc tggaaaaact gccgcagctg
     7321 accggcaaga ttgccgcgct gaccgataaa gccgaacttg ccaaccttgc cgacgaagcc
     7381 gcctcatcct tactcgacag cctgcacgaa tggcagttcc atttggcgga agagccgtct
     7441 ttgagcttgg ggccgtctga aaacgacagg cggaccaaca gcgaaccgac ttggctgtgg
     7501 gaagacggta aaatccccga aggcctcgaa accaccgttt ccaatacggc cattgctgcg
     7561 cgcagcctgc tcaaacacgt tgtcgggctg aacgatgcgc tttccgccgc gcgccgcgaa
     7621 aaagaacagg acggcgcgct cctcgaccgc ctgaccggcg atttcggcat cttcatcgcc
     7681 cgtatcgaac aaatcagcgc ggtttgggat ttgctctcta ccgttcccat tgagggcgaa
     7741 gagccgttgg cgaaatggat aacccgccgc gccgacgaca aaaacgacta cattttcaac
     7801 gccagcccca tcagcagcgc gtcccacctc gccaacagcc tgtggcggcg tgcggcaggc
     7861 gcggtgttga cctccgccac cctgcaatcc ttgggcaact ttaacctgat gctgcgccaa
     7921 accgggctgc aatggctgcc tgaaaccacc accctcgccc tcaaaagccc ctttgacttt
     7981 gaaaaacagg gcgaactcta catccccccc atatacgcca gccccaaaga ccccgaagca
     8041 cacaccgccg ccgtcatcga gtggctgccc aagcttattt cgcccaccga agccatcggc
     8101 acactcgtcc tgttttcctc gcgcaaacaa atgcaggatg tcgccctgcg cctgcccgga
     8161 gactacctgc cgctcctgct cgtacaaggc gaattgccca aagccgtcct cctgcaaaaa
     8221 caccaccggg ccatagaaga aggcaaagcc agcatcatct tcggactcga cagctttgcc
     8281 gaaggactcg acctgcccgg caccgcctgc gtgcaagtca tcatcgccaa actccccttc
     8341 gccatgcccg acaaccccat cgaaaaaacc caaaaccgct ggatagaaca gcgcggcggc
     8401 aaccccttca tcgaaatcac cgtccccgaa gccggcatca aactcatcca ggctgtcggc
     8461 cgcctcatcc gcaccgaaca agactacggc cgcgtaacca tcctcgacaa ccgcatcaaa
     8521 acacagcggt acggccaaca attattagcc ggcctgccac cgtttaaaag gatagggtaa
     8581 acctaccgcc cttcccgcaa cagaaaggaa aagtcatgaa cttcacccga ctgctcaacc
     8641 aagtcttaag cacggttcaa aaaaaaggca acacattctc cgacagcccg ctcaattcat
     8701 tcggcggagg cgcgctggtt gccggtgtcg cctccatgct actgaacggt aaaaaccgca
     8761 aaaccatcac caaaatcggt tcgaccgccg ctttgggcta cctcgcctac cggggctatc
     8821 agatgtggca gcaaaacaaa gggcaggcaa ccgtaacaca aagcgatttc caacctgccg
     8881 gagaaactga agaaacatac agccgcaccg tattgcgcac catgatagcc gccgccgctt
     8941 cagacggcat gatagacgaa gccgaacgcc ggactatcga acaggaaagc ggcacagacc
     9001 ccgaaactgc cgcatggctc gccgccgaat accgcctgcc cgcaagcatc ggggacatcg
     9061 ccaccgccgt cggcaacgat gaggcgttgg cggcggaggc ctatctggcg gcaaggttgg
     9121 tctgtgccga tttgtcgcgg aaagaaaccg tcttcctcgc ccgcctgtcg caggctttga
     9181 aactggatga caatctggtg gagagtttgg aaaggcaatt ggggttttga tgacacagct
     9241 ggggagggaa aatcatcaaa aaacggttat tccgaccccg gcctcaaaac g
//
LOCUS       DAWKOX010000070         9255 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.070, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000070 DAWKOX010000000
VERSION     DAWKOX010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9255)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9255)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9255
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.070"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1..678)
                     /locus_tag="WJK78_001176"
     CDS             complement(1..678)
                     /locus_tag="WJK78_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HEZ7598108.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
     gene            703..2718
                     /locus_tag="WJK78_001177"
     CDS             703..2718
                     /locus_tag="WJK78_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEZ7598109.1"
                     /translation="MILLPKPQSFIISLFFSILYTSPLLAVDYVYDNSKLTNEQIDRL
                     KKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALYSKTHQFKNINNSKKISFYDKEYT
                     EDYLVGFARGFGVEKRNGEEEKTLQQYFKDCVNTGNSNNDKCEQPSFENSGPRLIKSD
                     IFALAPQIKNSHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFHYIEVTDNSH
                     VIGQTISLDEFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKEDYAGGARFR
                     FAYDLKDKVSETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNGTADKHAFRL
                     SGKHQKGIYTLSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLNDKNSDIFDR
                     TLPRKGLWLRVIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQLSVGLMSGQ
                     AEQRSTFRNPDTDNLTTGNVKGFGAGIYATWHQLQDKQTGAYADSWVQYQRFRHRINT
                     EDATERFTSKGITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLGVNGKFSDSE
                     NAHVNLLGSRQLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGVEIDGERRVI
                     NNKTAIESQLGVAVKIKSHLTLQASFNRQTSKYHQAKQGALNLQWTF"
     gene            complement(2899..4266)
                     /locus_tag="WJK78_001178"
     CDS             complement(2899..4266)
                     /locus_tag="WJK78_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ7598110.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLIIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAVPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(4376..4642)
                     /locus_tag="WJK78_001179"
     CDS             complement(4376..4642)
                     /locus_tag="WJK78_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598111.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPAAEAAAT
                     EAPAAEAPTAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAAK"
     gene            5115..5597
                     /locus_tag="WJK78_001180"
     CDS             5115..5597
                     /locus_tag="WJK78_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ7598112.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDSELVRIEDVGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            5684..6496
                     /gene="hpnC"
                     /locus_tag="WJK78_001181"
     CDS             5684..6496
                     /gene="hpnC"
                     /locus_tag="WJK78_001181"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ7598113.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLDALRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(6567..7037)
                     /locus_tag="WJK78_001182"
     CDS             complement(6567..7037)
                     /locus_tag="WJK78_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ7598114.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSVLEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            7128..8969
                     /locus_tag="WJK78_001183"
     CDS             7128..8969
                     /locus_tag="WJK78_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ7598115.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPRAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT         2316 a         2025 c         2458 g         2456 t
ORIGIN      
        1 ttaaattggg ttatttcgaa gcatcttcat taatatttta cctaaatctt catgccggtg
       61 gttaaaccta aactccgttt ctttgagatg cagataaaac atctctttgg aaataccatg
      121 aaatttagcc aaacgcccct tagtataact ccaaaaagat tcaataccat tgatatgttg
      181 ctttcctcga gcaaactcat tggaaccatg atggacacgg taatgcttct catagcccat
      241 atcgacaaga ccgtcatatg ctttccagcc gtcagtattg atttcactgt cagcagatat
      301 gtgaccacgt atgaccttga ttagtgaggc tttcgaagcg tcgggaacga tttccgtata
      361 gaccacgcca ttgcgtttca gtatgccaaa tacgatggtt ttacctgacg ctccgcgacc
      421 gcgcttaccc ctgatacgtc gcgcaccaaa gtaagattca tctaattcga ccacaccgga
      481 cagtggtgag ctttgttcgc acagagcagc aatcctgtgt ctgattttca ggaaaatagg
      541 attgataccg cgtacactaa tgccggtcat tttagcagta tcggaagcgg tcaaatcaag
      601 agcgaaacag cggattattt ctctaaactt ttgctctgaa attttgctga acttttgata
      661 cttatttttt agtttcatat taggagctta tcaggttttt tgatgatttt gcttcctaag
      721 ccccaatcat ttattataag tctatttttt tctattcttt atacctctcc gcttttggct
      781 gttgattacg tttacgacaa ttctaaatta acaaatgagc aaattgatcg cttaaaaaaa
      841 cttagagata aaagcagcga atactggaaa caagaaactt atcttctaaa accgacgaat
      901 ggtagctctc agaactctct caaagttccc gcactatact ctaaaacaca ccaattcaaa
      961 aacatcaaca actcaaaaaa gatttctttt tatgacaagg aatacactga agattacctt
     1021 gttggcttcg cccgaggttt cggggttgaa aaaagaaatg gggaagaaga aaaaacactc
     1081 cagcaatatt ttaaggactg tgtaaatact gggaattcca ataatgataa gtgtgaacaa
     1141 ccatccttcg aaaactctgg cccaagatta ataaagagcg atattttcgc cttagctcca
     1201 caaataaaaa atagccatat caacagcgaa attttatctg taggtaatta tatcgaatgg
     1261 cttcgcccaa cacttaataa gcttcctagt tggcaagagc atctctattc tggtttagat
     1321 ccattccact atattgaggt tacagacaac tcacacgtta tcggacaaac aattagtttg
     1381 gatgaattcc gcttagaaaa ttctctctgg gaaccccgtt gggattctga tgttggggaa
     1441 ttaaaaacaa cgaatgcaga catccgtttt aatactaaaa gtgaaagttt actcgtaaaa
     1501 gaagattatg ctggcggagc tcgttttcgt tttgcttacg atctaaaaga taaagtctct
     1561 gaaacaccag ttttaacttt tgaaaaaaat ataactggca cttccgacat catcttcgaa
     1621 aatccaatag acgatttaaa aagtctcgac gggcatcaaa ttatcaaagt aaatggcaca
     1681 gcagataaac acgcattccg tctttctggc aaacaccaaa agggaattta tacgctttct
     1741 ttacaacaac gcccagaagg cttttttacc aaagtgcaag aacgcgatga tatttcgatt
     1801 tatgcacaac aggctcaagc cgccaatacc ttattcgcct tgcgtttgaa cgacaaaaac
     1861 agcgatattt ttgaccgcac tttaccacgc aaaggcttgt ggttgcgtgt gattgacgga
     1921 cattccaacc aatgggtgca aggcaaaaca gcacctgtag aaggctatcg taaaggtgtg
     1981 caactcggtg gcgaagtatt cacatggcaa aacgaaagta atcaactttc cgttggctta
     2041 atgagcggac aagcagaaca acgcagcact ttccgcaatc cagatacaga caatcttaca
     2101 acgggaaatg tgaaaggctt tggggcgggc atttatgcca cttggcatca gcttcaggac
     2161 aaacagacag gtgcgtatgc ggatagctgg gtacaatatc aacgcttccg ccaccgcatt
     2221 aacactgaag atgctacaga acgttttact tcaaaaggta ttaccgcctc aattgaagcg
     2281 ggttacaatg ctttattggc agaacacttc actaaaaagg gcaacagcct tcgtgtttac
     2341 ctacaaccac aggcacaatt gacttatttg ggggtaaacg gaaaattcag cgatagcgaa
     2401 aatgcccacg tgaatttact tggctcccgc caattacaaa ctcgggttgg cgttcaagct
     2461 aaagctcaat tttcactcta taaaaatatc gctattgaac ctttcgccgc tgtgaacgcg
     2521 ctttaccaca acaaaccttt cggtgtggaa atagacggag agcgtcgagt gataaacaat
     2581 aagacggcaa ttgagagcca attaggtgta gcagtgaaaa tcaaatctca cttaacttta
     2641 caagcctcat tcaaccgcca aacaagcaaa tatcatcagg ctaaacaagg tgcgttgaat
     2701 ttgcagtgga cgttttaagt taagttgtaa caaaataaaa tcggcaggga aattcactgc
     2761 cgattttttt attttaaaaa tgcggtcatt tttcgtgtca tttccaccaa ttttttaccg
     2821 cactcacgag ctcgcgctaa accgacaatc ggatctattg tccctttctt tgttgtgtat
     2881 gcaaatcaga aatgccggtt acggaagcag tttgcccgga ttcataatgt tatatggatc
     2941 aaggtgttgt ttgatgcttt tcatcagggc gatttcggca ggcgtgcgta ctttgtccag
     3001 ccactgtttt ttgatgatac ctatgccgtg ttcggcggca atcgtgccgt tgcaggcaag
     3061 aacgttgcga taaactgcgt cgttgatgtc gttttcgtaa cgatagactt cattgctgag
     3121 gatttcgggc aggaaagtat tgtagtgcag gctgccgtcg ccaagatgtc cgaagcagac
     3181 gatttgtatg cctttaaaat tctgttccaa atctttggcg caccggcgga caaagtcggc
     3241 aacgcgtccg ataggaacgg caatatcgtg tttgatgctg gtgcccagtt tgcgttggga
     3301 ggcggagatg ttttcgcgca atgcccacat atggatacgt tcttgttcgc tttgtgccaa
     3361 tacgctgtcg gtaaatcctt ttttataaag aaattcgacg agccgatcat caagattgct
     3421 gtcgggtaat gagtcggtca actcaagtaa aatatgccat tctgaatgtg tcggcagggg
     3481 gaatttgctg aattcggaag acaactcggc ggcaaaacgg ccgatcagct caaaactgca
     3541 taggcgttcg gcaaagtgag cttgggtttc ggtcagcagg cggacggcgg attcgatgtc
     3601 gggtatgccg acccatgccg ttgccttgtc cgagggacgg gcaaaaagct tgagtgtggc
     3661 ggcagtgatg atgcccagtg tgccttcgct gccgataaac agatggcgca ggtcgtagcc
     3721 ggtggtgttt ttatgcaggg gatggagatg ggaaaccagc tcgccgttgg ggaggacgac
     3781 ttccaaaccg ataatcaggt cgcgcatcgt gccgtaacgc aatacgttca aacctccggc
     3841 attgcaggcg atgttgccgc cgatttgaca ggagccttcg ctggcgagac tgagtgggaa
     3901 cagcctgttt gaggcttcgg ctgcctgttg gacggtttgg agtacggaac ctgcttcgac
     3961 ggttatgcag ttgtctgaca aattgatgct gcggatgcgg ttgagtttgg aaaggttcag
     4021 caatacgccg ttttccgata ctgccgcgcc gcacaaaccg gtattgccgc cttgcggcgt
     4081 aaccggaata cggtgttcgt aacaaaaacg cataatggtt tgcacgcttt caacgctgcg
     4141 cggctgcaaa atgatgtctg gtgcagacgt aaagcggttg cgctggtctt ttaaaagcgt
     4201 cggagaaagt tcggcaattt catctgccgg caggagtcgg gaaaattcgg tatgaaggtc
     4261 aggcatgttt gtcggaaggg tagggagaag attgaggaag ggaatctgat gccgtctgaa
     4321 aaatcaaaaa agcaggatac tgaacgtatc ctgctttttt gcaagcggaa aatgcttatt
     4381 ttgcagcttc ggcagcagga gcttcagcgg caggtgcttc ggtagcggca gcttcagcag
     4441 cgggagcttc ggcggcaggt gcttcagtag cggcagcttc agcagtggga gcttcggcgg
     4501 caggtgcttc agtagcggca gcttcagcag cgggagcttc ggcggcaggt gcttcggtag
     4561 cgggagcttc agcggctttt tcaccgccgc aggctgccag gaccaaagac aacaaagcag
     4621 cggcaaacag ggattttttc attttagtaa cctttagaac caatttaaat tattgaaaca
     4681 aataggtctt tatcgaccat actacaaacc gggttggaaa ttcatcgctg aatttgcgta
     4741 attatgcact atggaataag ggattgcaat gtcgtacaga tgggaaaaag gtttgaatga
     4801 aaagttttct ggcgggcgga ttgataaatc ctgtaaaacg gttttgctgt taaaaattcg
     4861 atagggataa atattataga gattaatata atttcagtat cttgtatgat ttattaaggc
     4921 ggattgggaa agtcggcaga caggtcggaa tggttttaat aatgttgtaa aaaagttaca
     4981 tcgcaataaa ataacaaaaa tttacattga aatatgtgct gtacagttta tgaacaggtt
     5041 aacggtaatc ggccggcgcg gcggttgtgt tagaatgcgc ctgtaatcaa tctgctgttc
     5101 ctgaaaggac aaatatggct atcgtgaaga attccgtggt ttcgctgcat tatgagatgt
     5161 atgatgccaa caatcagctt ttggacaaaa ccgaagaacc gattgcgtat ctgcacggcg
     5221 gttacgacgg cattttccct ttggtggaag aggcgttgca cggtaaggat gccggcgata
     5281 cggtcgatgt ggcgctttcg cccgacgatg cgttcggcga gcaggattcg gagttggttc
     5341 gtattgaaga tgtgggcgtg ttccctgttg aagtcgaagt cggcatgatg tttgaagccg
     5401 acgatcctga aaccggcgat gttgtcgtct atcgtgtaac cgatgttgcc gacggcaagg
     5461 cggtggtgga cggcaaccat cctttggcag gcatgaaaat ccgttttaag gctacggttg
     5521 aaagcgtgcg cgatgcatcc gatgaggaaa tcgcacacgg tcatgtccac ggcccgcacg
     5581 gtcatcacca ccactgattg ccggcagctt ggaggtatct gatgccgtct gaaaagggtt
     5641 tgttccgttt cagacggcat tttgtttgat ggatggagaa ggtatgtcgg ttgggcatta
     5701 tgaaaatttt cccgtcggtt cgctgatttt gccgcgcagg ttgaggaagc cggttcatgc
     5761 ggtgtatgcg tttgcacgga cggcggacga tatggcggac gagggcagta tgccgtctga
     5821 agccaggttg gcggggttgg atgctttgcg gcgcgagttg gacgtgttgg catcgggcgg
     5881 ccggtcggcg catcctttga ttgcacgatt ggatgccgag gcggttgtgc cgttcggttt
     5941 ggatttgcag ccgttttatg atttgctttc ggcgttttcg caggacgtgg ttaaaacgcg
     6001 gtacgcgcat ttcggcgaac tggccgatta ctgccggcgt tccgccaacc ctgtcggacg
     6061 cattatgctg gctttgtacg ggaaaacgga tgcggtgtgc gtggcgcaaa gcgacggcat
     6121 ctgtacggct ttgcaactgg tgaatttttg gcaggatgtg gctgtggatt ggcaaaaggg
     6181 cagggtttat attccgcagg acgatttgtt gaaattcggt gtttccgaag gacagattgc
     6241 ggagggtagg gcggatgcgg cgtttcagcg gctgatggcg tatgagtgcc ggcgcgcatt
     6301 tcgtatgctg aaggcgggtt cgcctttagc gcgcgaattg aaagggcgta tcggtttgga
     6361 actccgtatg attgtgttgg gggcgcagtt gattttgcag aaactggacg cgtgccgata
     6421 cgatgtgttt gcacaacgcc ccgttttgga taagaaggat tggttgatta tgctgaaacg
     6481 cgcgttgtgg aaatgatggg ggaaatgcat gccgtctgaa aggggttgtt ccgcttcaga
     6541 tggcattttg caggcggttg gtgtggtcag gcgatttcat gcgggttcaa cctggcttga
     6601 tcttctgcac ccaagccgat gagtttgcgc agtcgggtca tgtagaaatt gacatccaaa
     6661 ccggtgccgt agcgttgcgc cgtccacagt gtttccgcca gtgcctccat catttcgtgt
     6721 tcggcttcca gccagccgcg tttggcgcac agggtgtcgt ggattgcgcg tatgccgtgc
     6781 ggctggtcta tgcccgcctg ttcttggacg gacaaatgca gcgacatatg caggaagggg
     6841 ttgctttcgc cgttttcggg tagccagtcg gtgtccagat ggtcttcgat gcgttcgaga
     6901 taacggtggt attcgggatg ggcttcgata atgcggaggg ctttctgttc cagtacgctc
     6961 agttgcagcg gattgagccg ctgctgccac acgcgggcga aaaagcggcg gacatcgtgg
     7021 gtattgacat cgtacatggc gggttcggta agatgtttat ggaaataggt tcggataatg
     7081 gcgggtttta cataaattaa atcccaccgt caaccttacc atttataatg cagacaaatt
     7141 atttgtctga aacggattcg attatgaaaa aactgatttg cctgttcgcc gtatttttga
     7201 tgttgtgcgg acgagctttc gcgctggatg cgaacgatct gctgccgccg gaaaaggcat
     7261 tcgtgccgga gcttgccgtt gccgacgacg gtgtgaacgt ccgtttcagg attgccgacg
     7321 gatactatat gtatcaggcg aaaatcgtcg gcaagaccga tccggcggat ttgttgggac
     7381 agccttcttt cagcaagggc gaagagaagg aagacgagtt tttcggcagg cagacggttt
     7441 accatcacga agcgcaggtt gcctttcctt atgcaaaggc tgtcggcgaa ccgtataaat
     7501 tggttttgac ctatcagggc tgtgccgaag ccggcgtgtg ctatccgccc gtggataccg
     7561 agtttgatat ttccggcaac ggcacttacc atccgcaaac cgacgaaccg gcatccgcca
     7621 aagaccgctt tttgcagcct tcctctcaaa acggcagcgg ggcgttgccg cccccgaagg
     7681 gggatgaggg cggcgacagc cgtttcaagc tgtcttggga tacgctcaac gccaatcttt
     7741 tggcgttttt tctcgccggt ttgggtctga gttttaccgc ctgtatgtat cccctgttgc
     7801 cgattgtttc cagtattgtg gtcggcgaca aaaaggcggg caaggcgcgg gcgtttgtgc
     7861 tgtccgtcgt ttatgttcag ggtttggctc tgacttatac gctggtcggc attgttgccg
     7921 gactgacggg cgcgctgctg accgtatggt tgcagcaggc ttgggtggtg ttggcggcat
     7981 cggctttaat ggtcgtcttg gcactgtcta tgttcgggct gttcaacatc cagcttccca
     8041 acgccgtgca gtcgtatttc caaaaccaga gcagcaggct ttcaggcggt aaaatcgttt
     8101 ccgtctttat tatgggcata ttgtccgcgc tgattgtcgg gccgtgcgtc gccccgccgc
     8161 tggcatttgc tttgggctac atcggtcaga cgggcgatgc ggttttaggc ggtttggcac
     8221 tttacacttt ggcgttgggc accggcgttc cgctgattgc catcggcacg ttcggcgggc
     8281 atatcctgcc tagggcaggc gattggatga atgccgtcaa atacgctttc ggctttatcc
     8341 tgcttgccgt cgccgtttac ctcgccacgc cgcacttgcc ctattatctc gtcgtcgcgc
     8401 tgtacacgct gctgatgctg gttcctgcct gtatgctgct ggtcaacgga cgcaggcaga
     8461 aacgccgtcc gaaagctgtg gcattcgcat tgggcggcat attgctgata ggcggcgcgt
     8521 ggttcggctg gcagggcgca aacggcaaaa cgaccgcgct gcaccatttc ctgaccctca
     8581 atccaccagc cgaagcaggc aaatcttcgg aacacggcaa aatgtttgcc gatactgccg
     8641 cgctgaaggc agcgatggat acggcgttga aagaacatcc cgacaaaccc gtcgttttgg
     8701 atttttatgc cgactggtgt atttcctgca aagaaatggc ggcatacacg ctcaatcagc
     8761 cggaagtgca tcaggcggtt gatatggaac gctttttcca aatcgacgta accgccaaca
     8821 cgcctgaaca tcaggcgttg ttgaaagaat acggtctgtt cgggccgccg ggcgtgtttg
     8881 tcgtccgctc cgacggcagc cgcagcgagc cgctgctggg ttttgtcaaa gcagacaagt
     8941 ttatcgagtg gtatgaacaa aaccgctgat tccgatgttt caaatgccgt ctgaagttct
     9001 cagacggcat ttttgtcaga aaggaaaacg gcaatatcca ctatacacac ggaagcagtc
     9061 taaagatgtg aaaaccgtgt gtataagtta gtttgcgtat tgaaattaaa agataaaaat
     9121 acgatgatta aaaaataggc ataagaaaag ataaacacag ccggtgtttg ccggtgtgtg
     9181 tatcttttgt ggaaaaacat cttaatgtca tgtattttat ggaaaataat aacatgatta
     9241 aaaaatagtc aatca
//
LOCUS       DAWKOX010000071         9201 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.071, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000071 DAWKOX010000000
VERSION     DAWKOX010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9201)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9201)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9201
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.071"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..143)
                     /locus_tag="WJK78_001184"
     CDS             complement(<1..143)
                     /locus_tag="WJK78_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598116.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKYA
                     GKGL"
     gene            complement(161..718)
                     /locus_tag="WJK78_001185"
     CDS             complement(161..718)
                     /locus_tag="WJK78_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ7598117.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(794..2428)
                     /locus_tag="WJK78_001186"
     CDS             complement(794..2428)
                     /locus_tag="WJK78_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ7598118.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESAVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2709..3815)
                     /gene="serC"
                     /locus_tag="WJK78_001187"
     CDS             complement(2709..3815)
                     /gene="serC"
                     /locus_tag="WJK78_001187"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ7598119.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGATVVIIRED
                     LLERCPNDIPDVFNYRSHINRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTEDEELDRRFVLEAELQGLCLLKGY
                     KTVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4180..4611
                     /gene="rimP"
                     /locus_tag="WJK78_001188"
     CDS             4180..4611
                     /gene="rimP"
                     /locus_tag="WJK78_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ7598120.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4639..6141
                     /gene="nusA"
                     /locus_tag="WJK78_001189"
     CDS             4639..6141
                     /gene="nusA"
                     /locus_tag="WJK78_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ7598121.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGVDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6154..9042
                     /gene="infB"
                     /locus_tag="WJK78_001190"
     CDS             6154..9042
                     /gene="infB"
                     /locus_tag="WJK78_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ7598122.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDTAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQVTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHVRLIRNNVVIHTGE
                     LASLKRYKDDVKEVRMGFECGLMLKGYNEIMEGDQLECFDIVEVARTL"
BASE COUNT         2447 a         2635 c         2347 g         1772 t
ORIGIN      
        1 agacctttgc ctgcgtactt ggtacgctgg tcgcctccga acatggcgcg acacccgaca
       61 tttccgccga acgcatcggg cgtttcatga atccggttta aaacgcatgg aaaaatgccg
      121 tctgaaagcc tttcagacgg catttcgctt gagattccgt ttaccaatgg ctgacaaacg
      181 cttccaaatc ggtattcttg ggcttatgca cttcctctgt cggcgtgccg accatcatca
      241 gcccgatgat tttatcctta tccgcacatc cgaaagcctc acgcaacaga gggctgttga
      301 cccacatccc cgttatccag acattgtcga aaccttgcgc cgttgccgcc agttgcagcg
      361 catacgccgc acaacccgcc gtcagcatct gctcccattc cggtttcggc ttaggcacat
      421 cgcggttcgg cgcaaacgtt accccgataa ccatcggcgc catattgccc actttttccg
      481 cctttttcat cgcatcgtcg ccgaaattca attcggcaac cgtttgcttt aacacatcgc
      541 gaaaacgttg caatcctacc tcgccttgaa tcacggtaaa acggaagggg cgcatattgc
      601 cgtgatcggg aacttgggtt gccgcctgaa atatttgttc caactccgcc gcatcggggg
      661 cggggtgctt cagctttttg gaagatcggc ggttcgtcaa taattttaaa gcatccatat
      721 cgttatactc cggtcatcgg tcgggtgttc ggacacatat gccgtccgaa ggcttcagac
      781 ggcatatccg gcatcagcgc ggacggcggc aggctgccaa tatatccatt tccttccgat
      841 aggtttggct attggaaatg tccatcagcc ccaataccgt gctgaaatag tggtcgtgcg
      901 aatattcgtt ttccgccgct ttttgtttga ggcattggaa atctatgccc ccgtgttggc
      961 ggaaggcttt ggaaaaccac ataaccatcg ggatatgcgt ctgcccggaa ggcgcgatgg
     1021 cgtaaggcgc ggcgtgcagg tacatcccgt tttcgcccaa actttcgccg tggtcggaaa
     1081 cataatgcac cgcgctttcc aaatcgtcgc ggttttcaag tttgcggata accttgtcga
     1141 taaactggtc cacatacaaa accgtattgt cgtaagtgtt gaccagcgtg gcgcgggtgc
     1201 atttgttgat ttcgttggtg tcgcaggtcg gcgtgaattt gcgttcggct tcggtatagc
     1261 gttcgtaata cgtcggcccg tggctgccga tggtatgcag gattaaaacc gcgtctttat
     1321 cgtttttgtt gaggacttcg tcgaacttag tcagcaggat attgtcgaga cactcgccgt
     1381 tgcggcagta ttcgggcagg ttgagcgagg taacgtcggt attcggcact ttgccgcaca
     1441 cgcccttgca gccggaatcg ttttccaacc aggtaacttc cacgccggcg cgctgcacga
     1501 tgtccagcag gttgtcttgg tgttcggctt tgatttcgtc ataatccgtg cggtcgaagg
     1561 ttgagaacat acacggcagg gagtgcgcgg tcgatgtgcc gcagcttctg acctgcggga
     1621 aattgacaat ttcatcgccg cgcgcggcaa gcagcggcgt agtttggcgg ctgtaaccgt
     1681 tcaaacccca gttggcggca cgcgtggtct cgcccacgac cagcaccacg aaacggcgca
     1741 ggctgccggc cggccggttt tgcacgaccg ccatatccaa ttgcgtataa ggaatattgg
     1801 aacgcttcca atctttgtat ttcgacacgc ccgcgccgat gaaattagac ggcacaatca
     1861 gatgggttac tgatttattg ttgcggaaaa acgaggcgta atcctgatat tgcaacattg
     1921 cgatgcccaa cgcgcacaaa aaggaaacgg cggcaagcac aaggcgcgtc aaaagctcct
     1981 tataccaaac gcggtattta accttgacgg cgatatacgc cagcgcgggc aatacgccca
     2041 aacatacaat ccacagcaca tagcccggcg taatcaggcg cgcgctttcg gcagccgtag
     2101 tttgcaagac attattcaac atcgacttgt tgaaatagat attgaaaaat atttcttggt
     2161 aagacaccgc cgcactgata accaatatca acggaatcaa taccttatgc acgaaaggca
     2221 gggcaatgac gtgaaaaacg aaattactta aaaaaaacag caccaccggc atcgtataga
     2281 ggaagatatc cgccccggtg ccgttaaaag gatgaagctc gacaactttg gcaaaaaagg
     2341 cgtaattcaa taccagcgag gaatacaggg aaaggaaggc aatcagcgcg gaagagccga
     2401 gcttcggcct caggttcggt tttatcattt ggaatgtgtc ggataagggt tggaaaaggc
     2461 atccggcatt tggaatccgg attattgaaa aagattctta attataaggc aacggagcaa
     2521 agcagggcaa gaaaacggaa ggcgacgcag gctgtcggat acacatctcg gcacaaacag
     2581 catcacgccc ggattgaaaa ggacggatag ccgccggcag cacagtttta ccccgcatcc
     2641 caaaacgccg ccggagaacg ccgaaacagc cgatgccgtc tgaagccgct tcagacaaca
     2701 tcgggacatc aaccgtaacg ccgttggaaa tcgcgcataa aatctgccaa agcccgcacg
     2761 ccttcgagcg gcatcgcatt ataaatgctg gcacgcatac cgccgacggt tttatagccc
     2821 ttaagcaggc acaagccctg caattcggct tccagcacaa aacggcggtc aagctcctca
     2881 tcctccgttt ggaacacgac attcatttta gaacgcgcat tcggacggat acggttgata
     2941 tagaaaccgc cgctgccatc tatcgtctca tacaaggttt gcgccttcag ccgattgacc
     3001 gcttcaattt ttttcacacc gccctgcgcc tgcagccagc ggaacaccag ccccgacata
     3061 taaatcgcgt aagttgacgg cgtgttgtac ataccgtcgc ggttgatgtg cgaacggtag
     3121 ttgaacacat cgggaatatc gttcggacaa cgctcgagca aatcctcgcg gataatgacc
     3181 acggtcgcac cggccgggcc gatgtttttc tgtgcgcctg cgtaaatcag tccgtagtcg
     3241 gcaacatcaa actcgcgcga caaaatctcg ctggacatat cgcacaccag cggcggcatg
     3301 ccttctgaaa ggcgcggcac ttcacggtat tgcagcccgt tgaccgtttc attgacggca
     3361 aaatggacaa acgccgaatc gggtgcaaca tcccacgttt ccacaggcgg caggtcgaga
     3421 tagtcgaact gctcgccgcc atgcgccgcc aaacggattt ccgtatcggt caaacggctc
     3481 atctgttcat aagcgatacg gctccagttg cccgttacca ccgcgtcggc agtgcggaaa
     3541 ccgtgtgcca gattcatggc tgccatatta aattgggttg ttgctccgcc ctgcagaaac
     3601 aatatcttat agttgtcagg cactttcaaa agctgcctca aatcctgttc cgcatgatgc
     3661 aggatgctca aaaacatttc cgaacggtgg ctcatcgcca tcacgggaaa acccgtaccg
     3721 ttgtagtcca acatttcctg ccgcgccgtt tccaacacgg cttcgggcaa tacggcaggg
     3781 ccggcggaaa aattgtaaat cggataaaga gacatgatgc agccttgatt ctgaacaata
     3841 acccgcctga ttttaggctt gcagcaggct ttgtgcaagg atgggaaata cctgtcctcc
     3901 gccccgcttc atgccgcccg aacacggaaa acaacatcaa tatattgatt tacaaatata
     3961 aaaatcatgc tagcgacaaa tagatacatt tgttttgtca acaatattca cgatttccca
     4021 ttacaaacct cccttacacc cgcttttttc cgtcccaaaa acacaaaata aatcaacact
     4081 ttcatttctc cgcaaaagcg gttataatca cgccgatttt tcaactttga cgaaaaatgg
     4141 ccacggggcc atttttttat tatgtacata gggagcagca tggatatcca aaccatcctc
     4201 gaaaaaaccc tgcccggcct gggctacgaa ctggtcgatt tcgaactgac cgcgcaagga
     4261 acattgcgcg tgttcatcga caaagaaggc ggcattaccg tcgaagactg cgcaaccgtc
     4321 agcaaccact tgagccgcgt atttatggtt gaagacatcg actacaaaaa cctggaaatt
     4381 tccagccccg gactcgaccg ccccttgaaa aaagccgccg acttcgtgcg ctttgccggt
     4441 cagaatgcca aaatcaaaac ccgcctgccg atagacggtc aaaaaaactt tatcggtaaa
     4501 atcgaaggct gcgaaaacga cactgttacc gtttccttcg acggcaaaac cgtacaaatc
     4561 gaattgggca acatcgacaa agcccgcctg cgccccgaat tcaaattcta aaacacaaca
     4621 atattggaga tgttcaaaat gagtcgtgaa atgttacagc tggcagaagc actggcaagc
     4681 gaaaaaaacg ttgatgccga agtcgtcttc caagcactgg aattcgccct gtctaccgcc
     4741 gccaagaaaa aggcagaccg cgaacacatg gatgtccgcg tacaaatcaa ccgcgacacc
     4801 ggcgaatacc aaaccttccg ccgctggctg attgtcgccg atgaagacta tacctatccc
     4861 gatgtcgaaa aaaccatcga ggaaatccaa gaggaaattc ccggcactac catccaaatc
     4921 ggcgaatact acgaagagca gctgcccaac gaaggcttcg gccgccaagc cgcgcaaacc
     4981 gccaaacaaa tcatcctgca acgcatccgc gatgccgagc gcgagcagaa tctgaacgag
     5041 tttctcgccg tcaaagaaga catcgtgtcc ggcacggtca aacgcgtcga acgccacggc
     5101 atcatcgtcg aagtcgttgc cggcaaactg gacgcgctga ttccgcgcga ccaaatgatt
     5161 ccgcgcgaaa acttccgcag cggcgaccgc atccgcgccc tcttcctgcg cgtcgaagaa
     5221 atcggcaaca ccggccgcaa acaagtcatc ctgagccgta cttccggcga tttcctcgtc
     5281 aaactgtacg ccaatgaagt acctgaaatt gcagacggca tgcttgaaat ccgcgctgtc
     5341 gcccgcgacc cgggccagcg tgccaaagtc gccgtcaaag ccaacgacca gcgcatcgat
     5401 ccgcaaggca cctgtatcgg cgttcgcggt tcgcgtgtca atgccgtcag caacgaattg
     5461 tccggcgagc gcatcgacgt tgtcctttgg tcgcccgagc ctgcccaatt cgtcatgagc
     5521 gcgctctcac ccgccgaagt cagccgcatc gtcatcgacg aagacaaaca cgccgtcgat
     5581 gtcatcgttg ccgaagacca gctcgcgctc gccatcggac gcggcggtca aaacgtgcgc
     5641 cttgcttccg acctgaccgg ctggcagctc aacatcatga cttccgccga ggcagacgaa
     5701 cgcaatgcgg cagaagatgc cgccatccgc cgcctgttta tggatcactt gaacgtggac
     5761 gaagaaaccg ccgacgtact ggttcaggaa ggttttgcaa ccttggaaga agtcgcctat
     5821 gttcctgccg ccgaactgct tgccattgaa ggatttgacg aagaaatcgt cgatatgctc
     5881 cgcaaccgcg cccgcgatgc catcctgacc atggcgattg ccgccgaaga aaaactgggc
     5941 gaagtatccg acgatatgcg caacctcgaa ggcgtagatg ccgatatgct ccgcagcctt
     6001 gccgaagcag gcattaccac ccgcgacgac ttggcagagc ttgccgtgga cgaactgatt
     6061 gaaattaccg gtgtaaacga agaaaccgca aaagccgtca tcctgaccgc tcgcgaacac
     6121 tggtttaccg aagacaaata aaagggggta cagatgagta acacaaccgt agaacaattt
     6181 gccgccgagc tgaaacgccc cgtcgaagac ctgttgaaac agttgaaaga agccggcgtc
     6241 agcaaaaaca gcggcagcga ttccctgacg ctggacgaca aacagcttct gaacgcctac
     6301 ctgaccaaga aaaacggcag caacggcggc accatcagca tccgccgcac caaaaccgaa
     6361 gtcagcaccg ttgacggcgt aaaagtcgaa acacgcaaac gcggacgcac tgtcaacatt
     6421 ccttctgccg aagaattggc agcacaggta aaagccgccc aaacccaagc cgcacctgtc
     6481 cggccggagc agacggcaga agacacggca aaagcccgag ccgaagctgc cgcacgtgca
     6541 gaagcccgtg ccaaggcaga agcggaagcg gcaaaactga aagcggcaaa agcaggcaac
     6601 aaagccaaac ctgccgcgca gaaacccacc gaagcaaaag ccgaaaccgc acctgttgcg
     6661 gcggaaacca aacccgccga agaaagcaaa gcggaaaaag cccaagccga caaaatgccg
     6721 tctaaaaaac ccgccgagcc caaagaaaaa gccgccaagc cgaaacacga gcgaaacggc
     6781 aaaggcaaag atgccaaaaa accagcgaaa cctgccgcac ctgccgtgcc gcaacccgtg
     6841 gtcagcgcag aagaacaggc gcaacgcgat gaagaagcac gccgtgccgc cgcacttcgc
     6901 gcccaccagg aagccctgtt gaaagagaaa caggaacgcc aggcacgccg cgaagccatg
     6961 aaacaacagg cagaacaaca ggcaaaaacc gcacaggaag ccaaaaccgg cagacagcgt
     7021 cccgccaaac ctgccgagaa accgcaggca gccgcgccgg ccgtcgaaaa caagcctgtc
     7081 aatccggcaa aagcgaaaaa agaagaccgc cgcaaccgcg atgacgaagg tcaaggccgc
     7141 aacgccaaag gcaaaggcgg aaaaggcggg cgcgaccgca acaatgcacg caacggcgac
     7201 gacgagcgcg tacgcggcag caaaaaaggc aaaaaactca aactcgagcc gaatcaacac
     7261 gccttccaag caccgaccga acccgtcgtt catgaagttt tggttcccga aaccattacc
     7321 gttgccgatt tggcgcacaa aatggcggtc aaaggcgtgg aagtggtcaa agccctgatg
     7381 aagatgggca tgatggttac catcaaccaa tccatcgacc aagacaccgc cctgattgtg
     7441 gtggaagaac tcggccacat cggcaaacct gccgcagccg acgaccctga agcattcttg
     7501 gacgagggcg cggaagcggt ggaagccgaa gcattgccgc gtccgcccgt cgttaccgtc
     7561 atgggccacg tcgaccacgg caaaacctcg ctgctggact acatccgccg taccaaagtg
     7621 gtacagggcg aagcaggcgg cattacccaa cacatcggtg cataccacgt tgaaacccca
     7681 cgcggcgtga ttaccttctt ggatactccg ggtcacgaag cgtttactgc catgcgtgcg
     7741 cgcggtgcga aagcaaccga tatcgtgatt cttgtggtcg ccgccgacga cggtgtgatg
     7801 ccgcaaacca tcgaagcgat tgcccacgcc aaagcggcag gcgtaccgat ggtggttgcc
     7861 gtcaacaaaa tcgataaaga agccgccaac ccagagcgta tccgccaaga gctgaccgca
     7921 cacgaagtcg tgcctgacga atggggcggc gatgtacagt ttatcgacgt ttccgctaaa
     7981 aaaggcctga acatcgatgc attgctcgaa gcagtcttgc tcgaagccga agttttggaa
     8041 ctgactgccc ctgtcgatgc acctgccaaa ggtatcatcg ttgaggcacg tttggacaaa
     8101 ggccgcggcg cggttgccac attgctggtt caaagcggta cgctgaaaaa aggcgatatg
     8161 ctgctggccg gtacggcatt cggcaaaatc cgcgcgatgg tcgatgaaaa cggcaaatcc
     8221 attaccgaag ccggcccgtc catccccgtc gaaatcctcg gcttgtccga cgtaccgaat
     8281 gcgggtgaag acgcgatggt attggcggac gagaaaaaag cgcgcgaaat cgccctcttc
     8341 cgccaaggca aataccgcga cgtgcgcctt gccaaacagc aggcggcgaa gctggaaaat
     8401 atgttcaaca atatgggcga aacccaggcc caatctttgt cggtcatcat caaggcagac
     8461 gttcagggtt cttacgaggc tttggcgggc agcctgaaaa aactgtccac cgacgaggtg
     8521 aaagtgaacg tattacacag cggcgtgggc ggcattaccg aatcagatgt caaccttgcc
     8581 atcgcttcgg gcgcgttcat tatcggcttt aacgtgcgtg cagatgcctc ttcgcgcaaa
     8641 cttgccgaaa atgaaaacgt ggaaatccgc tactacaaca tcatctacga tgccatcgac
     8701 gacgtgaagg cggcgatgag cggcatgctt tctccggaag agaaagagca agtaaccggt
     8761 acggtcgaaa tccgtcaggt catctccgtt tccaaggtcg gcaacattgc aggctgtatg
     8821 gttaccgacg gcgtggtcaa acgcgattcc catgtccgcc tcatccgcaa caacgtggtc
     8881 atccacacgg gcgaactggc ttcgttgaaa cgctataaag acgacgtcaa agaagtccgt
     8941 atgggctttg agtgcggcct gatgctcaaa ggctacaacg aaatcatgga aggcgaccaa
     9001 ctggaatgct tcgacatcgt cgaagtggca cgcaccctgt gattttgatg cggaaaaatg
     9061 ccgtctgaag cgttcagacg gcatacggaa cgggttctgt atcatacaga acccgttttt
     9121 tatcgcaaat cggcttcaga cagccctcct gccttatccc gatttgaatc tgacttgcca
     9181 tacaaacagg cttcagacgg c
//
LOCUS       DAWKOX010000072         9143 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.072, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000072 DAWKOX010000000
VERSION     DAWKOX010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9143)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9143)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9143
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.072"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..1938
                     /locus_tag="WJK78_001191"
     CDS             <1..1938
                     /locus_tag="WJK78_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7598123.1"
                     /translation="ISPEIFGTLFQSVMDAQERREAGAHYTETANIDKVINGLFLENL
                     RAEFEAVKALKRDKDKKLAAFYQKIQNLQFLDPACGCGNFLIVAYDRIRALEDDIIAE
                     ALKDKTGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDGEV
                     ACHTLPLEDAAEIIHANSLRTPWQAADYIFGNPPFIGSTYQTKEQKNDLESICGHIKG
                     YGLLDYVCNWYVKAAGIMAQHPQVQTAFVSTNSICQGQQVEILWGSLLKQDIEIHFAH
                     RTFQWTSQAAGKAAVHCIIVGFRQKPQMPSEKTLYDYPDIKGEPVKHAAANINPYLID
                     APDVIIAKRSRPVHCEPDMVNGSKPTEGGNLILSTDEKEALIAAEPLAEQYIRPFVGA
                     EEFINGKTRWCLWFHGVSDVKRNHDLKQMPQVQARIQAVKTMREASSDKQTQKDAATP
                     WLFQKIRQPSDGNFLIIPRVSSESRRFVPIGYLSYETVVSDLVFTLPNASLYHFGILS
                     STMHNAFMRTVAGRLESRYRYSNTVVYNNFPFPESCRMPSENDRQDPLRAAVETAAQA
                     VLDARGQYRREAREAGLPEPTLAELYAPDAGYTALDKAHAALDKAVDKAYGYKTGKNT
                     DDEAERTAFLFELYRKAAAIA"
     gene            complement(2773..3456)
                     /locus_tag="WJK78_001192"
     CDS             complement(2773..3456)
                     /locus_tag="WJK78_001192"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ7598124.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVIPDGENLQVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            3752..6055
                     /gene="parC"
                     /locus_tag="WJK78_001193"
     CDS             3752..6055
                     /gene="parC"
                     /locus_tag="WJK78_001193"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ7598125.1"
                     /translation="MNMQPHAPHTDSNTLMLGQYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPIVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            6076..7593
                     /locus_tag="WJK78_001194"
     CDS             6076..7593
                     /locus_tag="WJK78_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEZ7598126.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYVWLAIACWLIFFSIIHPHWQWQALRIPSFSAVADITMIGVLTYLF
                     GGIDSGFGILILPFVVCSCLLSYGRYPLLYSSYAAILLIFNAIADGDIGKYPLISDAR
                     TASATFILVAASYLSAIFTSLSVRYIDRAGKLARDNHLAYRRIKGLSQTVLERVQEAV
                     VVINTEGLAVLFNRKAKDLFPALEIGRRADLSDSAAELWDQASPHTFENVLGTLGLTA
                     RIRAVPVNKGPDKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHA
                     NDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTEREAIGLIPFW
                     EEFKQEFLLGHPDAAGCIRLDMQGNHLTAYFDPAHLRQIMWNLANNAWRHSRKQPGSI
                     SVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWRTPISAI"
     gene            7645..8112
                     /locus_tag="WJK78_001195"
     CDS             7645..8112
                     /locus_tag="WJK78_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ7598127.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            8216..8968
                     /locus_tag="WJK78_001196"
     CDS             8216..8968
                     /locus_tag="WJK78_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ7598128.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         2255 a         2857 c         2220 g         1811 t
ORIGIN      
        1 atcagtcccg aaatcttcgg cacgctcttc caatcagtca tggacgcaca agagcggcgc
       61 gaagcgggcg cacactacac cgaaaccgcc aacatcgaca aagtcatcaa cggccttttt
      121 ttagaaaacc tgcgcgccga atttgaagcc gtcaaagccc tcaaacgcga caaagacaaa
      181 aaactcgccg ccttctacca aaaaatccaa aacctgcaat tcctcgaccc ggcctgcggc
      241 tgcggcaact tccttatcgt cgcctacgac cgtatccgcg ccctcgaaga cgacatcatc
      301 gccgaagcgc tcaaagacaa aacaggcggc ttattcgaca gcccgtccgt ccaatgccgt
      361 ctgaaacagt ttcacggcat cgaaatagac gaatttgccg tcctcatcgc ccgcaccgcc
      421 atgtggctca aaaaccacca atgcaacatc cgcacgcaaa tccgcttcga cggcgaagtc
      481 gcctgccata cgctgccgct cgaagacgcc gccgaaatca tccacgccaa cagcctccgc
      541 acaccttggc aggcggcgga ctacatcttc ggcaatccgc cctttatcgg ctcgacctac
      601 caaaccaaag agcagaaaaa cgacctcgaa agcatctgcg gccatatcaa aggctacggc
      661 ctgttggatt acgtctgcaa ctggtatgtc aaagccgccg gtatcatggc gcagcatccc
      721 caagttcaga cggcatttgt ttccaccaat tccatctgcc aaggccagca ggtcgaaatc
      781 ctttggggca gccttttgaa gcaagacatc gaaatccact ttgcccaccg cacctttcaa
      841 tggacgagcc aagccgcagg caaagccgcc gtccactgca tcatcgtcgg cttccgccaa
      901 aagccgcaaa tgccgtctga aaaaaccctc tacgactatc ccgacatcaa aggcgaaccc
      961 gtaaaacacg ccgcggccaa catcaatccg tatctgattg acgcgcccga tgtgattatt
     1021 gccaagcgca gccgtcccgt acattgcgaa cctgacatgg tcaacggaag caaaccgacc
     1081 gaaggcggca accttatcct ttcaaccgat gaaaaagaag ccctgattgc cgccgaaccc
     1141 ttggcggaac aatacatccg tccctttgtc ggcgcagagg aatttatcaa cggcaaaacc
     1201 cgttggtgcc tgtggtttca cggcgtatcc gacgttaaac gcaaccacga cctgaaacag
     1261 atgccccaag ttcaagcccg tattcaggca gtcaaaacca tgcgcgaagc cagcagcgac
     1321 aaacaaactc aaaaagatgc agcaaccccg tggctttttc aaaaaatccg ccagccttca
     1381 gacggcaatt ttctgattat cccacgcgtc tcatccgaaa gccgccgttt cgtccccatc
     1441 ggttatctat catatgaaac agttgtcagc gatttggtat ttacccttcc aaacgccagc
     1501 ctctaccact tcggcatcct cagctccacc atgcacaacg cctttatgcg taccgttgcc
     1561 ggccgtctgg aaagtcgtta ccgctattcc aataccgttg tgtacaacaa cttccccttc
     1621 cccgaaagct gccggatgcc gtctgaaaac gaccgccaag acccgctccg cgccgccgtc
     1681 gaaaccgccg cccaagccgt cctcgacgcg cgcggacaat accgccgaga agcgcgggaa
     1741 gccggtttgc ccgagccgac cctcgccgaa ctctatgcgc ccgacgcagg ctataccgcc
     1801 ctagacaaag cccacgccgc cctcgacaag gcagtcgata aagcctacgg ctacaaaaca
     1861 ggcaaaaaca ccgacgacga agccgaacgc accgccttcc tgttcgagct gtaccgcaag
     1921 gcggcggcaa ttgcgtagta gttgcgtagt agttgcgtag tagttgcgta gtagttgcgt
     1981 agtagttgcg taggatagtt gcgtagggtg ggcttcagcc caccaactcc caccaactcc
     2041 caccatcttc accctaaaac cccgtcatct ccgcaaaagc aattgcgtag ggtgggcttc
     2101 agcccaccgt ttttcttcat tttcggttgt tgattggcag gctgaagccc accctgcggt
     2161 tacaaaaatc ccgtcattcc cgcgcaggcg ggaatccaga cctttcgggg cggaaactta
     2221 tcggataaaa cgatttcccc tgcatcctgg attcccactt tcatgggaat gacgggatat
     2281 aggtttccct acggacgtgt tcagattccc gccttcgcgg gaatgacggc ggagaagttt
     2341 ctgtctttcc gataacttac cgtaacttaa aatcccgtca ttaccgcaaa agcagttgct
     2401 acggttacaa aaatcccgtc atccccacga aagcgaaaat cctgcctgtc ggatttcggt
     2461 tttttcgggc gtttcgggaa cttataaatc gtcattcccg cgcaggcggg aatccagaac
     2521 gcgggacggc ggcaatattc aaaggttgtc tgaaaattca gaggttctag attcccgcct
     2581 gcgcgggaat gacggcggag cggtttctgc ttttccgata aatgaccgca acctaaaacc
     2641 catccttccc acgaaaacag aaaaacaaaa acctaaaatc ccgtcgttct cgcgaaagca
     2701 gttgctacgt ttaccgtcaa aaatgccgtc tgaacgctca agccttcaga cggcattttt
     2761 tatttcacac ccttacaggt agaatttttc gatgactttc aaattgtcgt ccaatttgta
     2821 caccaacggc tgaccggtcg ggatttccaa gcccatgatg tcttcgtcgg aaatgccctc
     2881 gatgtgtttt gccagcgcgc gcagggagtt gccgtgcgcc gccaccaaga cgcgtttgcc
     2941 gctcaaaatc gcgggggcga tttggtcttc ccaaaacggc aatacgcgct ccagcgttac
     3001 ttgcaggttt tcgccgtcgg ggataacatc ggcaggcaga tgggcatagc ggcggtcttt
     3061 gtgtgcggaa aactcatcgt ctttgtccaa aagcggcggc agggtgtcgt agctgcgccg
     3121 ccagatgcgg acttgctcgt cgccgtattg ttcggcggtt tgttttttgt ccaggccttg
     3181 cagtcggccg tagtggcgtt cgttcagccg ccatgttttg atttgcggta cgaacagttg
     3241 gtcggattct tccaaaacga tgttgcaggt cttaatcgcg cgggtcagga cggatgtgaa
     3301 ggcgatgtcg aactcatagc cgttttcttt cagtttttta ccggcggcag cagcctcggc
     3361 aagcccctgc tcgctcagct tcacgtcgcg ccagcctgta aacaggtttt tcgcgttcca
     3421 ttcgctttgt ccgtggcgga taaataccaa ttccatatcg tctccaatgt gtgaaagtgg
     3481 gaaagcctta tttataacat attttcacat tcccgtattt gattcagatt cagacacgcg
     3541 cccactatgg tttgccgttt tgatttacaa taatgccctt tgctttacat tccgcataca
     3601 caatgtttca acacacagga cgacacataa agcaccgccc tatgtgttgc cctgatttgg
     3661 aaggggttgc cccctcccaa ataaagtctg attctaccgc cccgaaggac agatgtccaa
     3721 gtggcggggg ttcaaccgaa aaggaaatac gataaatatg caaccgcacg ctccacatac
     3781 cgattccaat acgctgatgc tcggtcaata cgccgaacgc gcctatctcg aatacgccat
     3841 gagcgtggtc aaaggccgcg cgctgcctga agtttcagac ggccagaagc ccgtgcagcg
     3901 gcgcattttg tttgccatgc gcgatatggg tttgacggcg ggggcgaagc cggtgaaatc
     3961 ggcgcgcgtg gtcggcgaga ttttgggtaa ataccacccg cacggcgaca gttccgccta
     4021 tgaggcgatg gtgcggatgg cgcaggattt taccttgcgc tatcccttaa tcgacggcat
     4081 cggcaacttc ggctcgcgcg acggcgacgg ggcggcggcg atgcgttaca ccgaagcgcg
     4141 gctgacgccg attgcggaat tgctgttgtc cgaaatcaat caggggacgg tggattttgt
     4201 gccgaactac gacggcgcgt ttgacgaacc gctgcacctg cccgcccgcc tgcctatagt
     4261 gttgctcaac ggcgcgtcag gcattgcggt gggcatggcg accgagattc cgtcgcacaa
     4321 tttgaacgaa gtgacgcagg cggcgattgc gttgttgaaa aagccgacgc tggaaaccgc
     4381 cgacctgatg caatacattc ccgcacctga ttttgccggc ggcggtcaaa tcatcacgcc
     4441 ggcggacgaa ttgcgccgga tttatgaaac cggcaagggc agcgtgcgcg tgcgtgcgcg
     4501 ttatgaaatc gaaaaattgg cgcgcggaca atggcgcgtc atcgtaaccg agctaccgcc
     4561 gaacgccaat tccgccaaaa tccttgccga aatcgaagag cagaccaacc cgaaaccgaa
     4621 agcgggcaaa aagcagctca accaagacca gctcaatacc aaaaagctga tgctggattt
     4681 aatcgaccgc gtgcgcgacg agtccgacgg cgaacatccc gtgcgactgg tgttcgaacc
     4741 gaaatccagc cgcatcgata ccgatacctt catcaacacg ctgatggcgc aaacttcgct
     4801 ggaaggcaat gtgtccatga acttggtgat gatggggctg gacaaccgcc ccgcgcagaa
     4861 aaacctgaaa acgattttgc aggaatggct ggatttccgc accgtaaccg taacacgccg
     4921 tctgaaattc cgtttgaacc aagtggaaaa acggctgcac atcctcgaag gccgtctgaa
     4981 agtctttctg cacatcgacg aagtgattaa agtcatccgc gaatcagatg acccgaaagc
     5041 cgatttgatg gcggcgttcg ggctgaccga aatccaagcc gaagacattt tggaaatccg
     5101 cctgcgccag ttggcacgtt tggaaggttt caaactcgaa aaagaattga acgaattgcg
     5161 cgaagaacaa ggccgtctga acatcctttt gggcgatgaa aacgaaaagc gcaagctgat
     5221 tatcaaagag atgcaggcgg atatgaaaca atacggcgat gcacgccgca cgctggtgga
     5281 agaggccgga cgcgccgtgc tgacacaaac caccgccgac gaacccatca cactgattct
     5341 gtcggaaaaa ggctggatac gcagccgtgc cggacacaat ctcgatttga gccaaaccgc
     5401 gttcaaagaa ggcgaccgcc tcaaacaaac ccttgaaggc agaacggttt tacccgtcgt
     5461 catcctcgat tcattgggca gaacctatac actcgatgcc gccgaaattc ccggcggacg
     5521 cggcgacggc gtgccggttt catccttgat cgagttgcaa aacggcgcga aacccgttgc
     5581 gatgttgaca ggattgccgg aacaacatta tttattatca agcagcggcg gctacggctt
     5641 catcgccaag ttggctgata tggtcggacg cgtaaaagcg ggcaaagtgg tgatgaccac
     5701 agacagtggc gaaaccgtcc tgccgccgat tgccgtctat gcctcctcgt tcatcaaccc
     5761 cgactgcaaa atcattgccg ccaccagtca aaaccgcgcc ctcgccttcc ccatcggcga
     5821 attgaaaatt atggcgaaag gcaaagggct gcaaatcatc ggattaaacg ccggcgaatc
     5881 gctgacgcat accgccgttt cttccgagcc ggaaatcctg attgaaagcg aaggcaggcg
     5941 cggcgcggcg cacaaagacc gcatccccgt ctccctgctt gaggcaaaac gcggcaaaaa
     6001 aggcaaacta ttacccatat cgggcagcct gaaacagctt tcttccccca aataaacccg
     6061 attccacaca taattatggt gatttccaac ccccgcgaac ttgaaaaact caaagaccgg
     6121 attcccaatc tgatcaacat catccgcgtc gccatcgttt ttccgctgat gattatgcac
     6181 atcctcgggc tggaaaccgg cagccgtgcg aacctgcacg cttcgtggac ggcgtgggcg
     6241 ttttatgttt ggctcgccat tgcctgctgg ctgattttct tttccatcat ccatccgcat
     6301 tggcaatggc aggctttgag aataccgagt ttcagcgcgg tggcggacat cacgatgatc
     6361 ggcgtgctga cctacctgtt cggcggcatc gactccggct tcggcatcct gattctgccc
     6421 ttcgtcgtct gctcctgcct gctcagctac gggcgctacc ccctgctcta ttccagctac
     6481 gccgccatcc tgctgatatt caacgccatt gccgacggcg atatcggcaa atacccgctc
     6541 atatcggatg cccgaaccgc ctcggcaacc ttcatccttg tcgccgcctc ctatctttcc
     6601 gccatcttca cctcgctgtc ggtcagatac atcgaccgtg ccggcaaact tgcccgcgac
     6661 aaccacctcg cctaccggcg catcaaaggc ttgagccaaa ccgtactcga acgcgttcaa
     6721 gaagccgtcg tcgtcatcaa taccgaaggg ctggcggtgc tgttcaaccg gaaggcgaaa
     6781 gaccttttcc ccgcactcga aatcggacgg cgcgccgacc tgtccgattc tgccgccgaa
     6841 ctgtgggacc aagcctctcc gcacactttc gaaaacgtcc tcggcacact cggcctgacc
     6901 gcccgcatcc gcgccgttcc ggtcaacaaa gggccggaca agctgctcat cctctacatc
     6961 cgcccgcaaa gcgaaattca ggcagaagcc ctgtccgtca aacttgccgc gctcggacaa
     7021 ctgaccgcca accttgccca cgaaatccgc aacccgatgt ccgccatccg ccacgccaac
     7081 gacctgctgc gcgaaaatat ggaagcgggg gcggcagatc cgttcaacgc caaattgtgc
     7141 aaaatcatcg acggcaacgt ctgccgtatc gacaaaatgc tcgaagatat ttcctcgctc
     7201 aacaagcgca acaaaaccga acgcgaagcc atcggcctga taccgttttg ggaagaattc
     7261 aaacaagagt tcctgctcgg ccatcccgat gccgccggct gcatccgcct agatatgcag
     7321 ggcaatcacc tgaccgccta tttcgatccc gcccacctgc ggcaaattat gtggaacctc
     7381 gccaacaacg cgtggcggca cagccgcaaa cagcccggct cgatttccgt caccatccgc
     7441 cccgcgcaaa aaaacaccgt ctgtatcctc tttgccgacc gcccgaagtg caggaacacc
     7501 tgttcgaacc cttttacacc acggcggaaa acggcaccgg cctcgggctg tatgtcgccc
     7561 gcgaactggc gcacgccaat ttcggcgatt tgacctacct accggaagcc aaatgtttcg
     7621 aactcacatt accggaaaaa accaatgact gaactgcaac accccgtcct cgtcgtcgat
     7681 gacgaaaccg acattctcga cctgatggaa atgaccctga tgaaaatggg cttgcgcgtc
     7741 cataccgcgt caggcgttgc cgaagccaaa aacaagctcg acagccaacg ctattcgctc
     7801 gtcctgaccg atatgcgtat gccggacggc tcggggctgg aagtcgtcca acacatcaac
     7861 agccgcctgc tcgatacgcc ggttgccgtc atcaccgcct tcggcaacgc cgatcaggca
     7921 caggaagcgt tgcgttgcgg cgcgttcgac cccgatacca tgcagataca ggactatctc
     7981 gaccaaatcg aacgcgacat tatcgaacaa accctcaaac aaaccgaagg caaccgcacg
     8041 caggccgcca aacgcttggg catcagcttc cgttccatgc gctaccgtat ggaacgcctc
     8101 aacatcggct gacgacaaaa cggcatccgc accatctccg cccacccgaa aaaatgccgt
     8161 ctgaaacggc acgggaaagc gggttcgccc cacgcccgaa cggacacaaa acaccatgac
     8221 cgacatcctt attgacaaca ccgccaccga aaccgtccgc accctgatac gggcattccc
     8281 ccttgtgccc gtttcccaac cgcccgaaca aggcagttac ctccttgccg aacacgatac
     8341 cgtcagcctc aggcttgtcg gggaaaaaag cagcgtcatc gtcgattttg cctccggcgc
     8401 ggcacaatac cggcgcacaa aaggcggggg cgaactcatc gccaaagccg tcaaccacac
     8461 cgcgcacccc accgtttggg acgcaaccgc aggattgggg cgcgacagct tcgtcctcgc
     8521 ctcgctcggg ctggccgtta ccgccttcga gcaacatccc gccgtcgcct gcctgctttc
     8581 agacggcatc cgccgcgccc tcctcaatcc cgaaacgcaa gacaccgccg cgcgcatcaa
     8641 cctccatttc ggcaacgccg cagtacaaat gcccgccctt gttcaaacac aaggcaaacc
     8701 cgacatcgtc tatctcgacc ccatgtatcc cgaacgccgc aaaagtgccg ccgttaaaaa
     8761 agaaatgacc tacttccacc ggctcgtcgg cgaagcgcaa gatgaagcgg cactcctgca
     8821 taccgcacgc caaacagcaa aaaaacgcgt cgtcgtcaaa cgcccccgcc tcggcgaaca
     8881 ccttgccgga caagcccctg cctaccaata caccggcaaa agcacccgct tcgacgttta
     8941 cctgccctac gggacggaca agggataacg cccataaaac aagacaccga aaaatttgcc
     9001 gttcttatgc aaacgagaaa ccggtttttg cgtttcgact gttttggata aatcatcaca
     9061 ccttaaagtt tgtcattccc acggaagtgg gaatccagaa atgaaaagca acaggaattt
     9121 atcgtaaatg accgaaaccg aac
//
LOCUS       DAWKOX010000073         9103 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.073, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000073 DAWKOX010000000
VERSION     DAWKOX010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9103)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9103)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9103
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.073"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(60..1316)
                     /locus_tag="WJK78_001197"
     CDS             complement(60..1316)
                     /locus_tag="WJK78_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ7598129.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLFDEEETAFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWREEEILAFGRSINQPAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLAGLKIDL
                     DTGKYLRLNSARHQTDGFFAAVLQRK"
     gene            complement(1664..2005)
                     /locus_tag="WJK78_001198"
     CDS             complement(1664..2005)
                     /locus_tag="WJK78_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598130.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2208..3065)
                     /locus_tag="WJK78_001199"
     CDS             complement(2208..3065)
                     /locus_tag="WJK78_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ7598131.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFTNAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPQGFHAFEPPLNPYGWRDVYIQD
                     WAEYGFERQEVRYHLLDRMAYLAPARAAETETLNETEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3126..3941)
                     /locus_tag="WJK78_001200"
     CDS             complement(3126..3941)
                     /locus_tag="WJK78_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ7598132.1"
                     /translation="MTTLKPALPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            4005..4175
                     /locus_tag="WJK78_001201"
     CDS             4005..4175
                     /locus_tag="WJK78_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598133.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCTSEPAVCHP"
     gene            4185..4970
                     /locus_tag="WJK78_001202"
     CDS             4185..4970
                     /locus_tag="WJK78_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ7598134.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDVVAANPKVLAQMLKIISAHV"
     gene            5240..7335
                     /locus_tag="WJK78_001203"
                     /pseudo
     CDS             5240..7335
                     /locus_tag="WJK78_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            7459..9009
                     /locus_tag="WJK78_001204"
     CDS             7459..9009
                     /locus_tag="WJK78_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ7598135.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLITAVKGEASGLFTHNPVLNIKTFRFTLPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEARASIAD
                     INETLRLMVDSTVQSMAREKYLTLDGNQIDTVISLKNNALKLNGKTLQNEPDPDFDEG
                     GMVSEPQQ"
BASE COUNT         2282 a         2160 c         2410 g         2251 t
ORIGIN      
        1 gatgaaatgc cgtctgaacg ctttgaaaag ggttcagacg gcattttgtt taaacagggt
       61 tatttgcgtt gcaatacggc ggcgaagaag ccgtcggttt ggtgtcgggc ggagttgagg
      121 cgcaggtatt tgccggtatc caaatcgatt ttcaaaccgg caagcagttc ggcgcagttg
      181 acgggttcaa attcgggatg ttcggacagg aaacgttcga cttgcagctc gttttcttcg
      241 ggcaggatgc tgcaagtggc gtaaaccaag cggccttgcg gttttaccag tttggaggcg
      301 gcatcgagga tgctgtgttg ctgttccaaa aggttggcca cggtttcggc ggattggcgg
      361 tatttgaggt cgggattgcg gcgtaaagta cccaaaccgg agcagggcgc gtccaccaac
      421 acacggtcgg ctttgcctgc cagtcgggcg atacggctgt cgtgttcgct gctgatgcgt
      481 tcggggtgga tattggtcag tccggcgcgg gtcatacgcg gtttgaggtt ggcaaggcgt
      541 ttttcggcga tgtcgaaggc gtagattctg cctttattgg ccatttgcgc accgacagcc
      601 aaggttttgc cgccggcacc ggcacagaaa tcgacaatga tttcgccgcg ttttgcgccc
      661 accaataaag caagcagctg gctgccttcg tcttggactt ccagtgtgcc gtctaaaaac
      721 agttcgtgtt tgttaagcgc gattttgttt ttcaggcgga tgccccaagg cgaataaggc
      781 gttgcctctg catcggcact ttcggcttgc aacagcggca gcactttatc gcgtttgcct
      841 ttcaaagtgt tgacgcggat gtcgagcggg gcaggctggt tgatgctgcg gccgaaggcg
      901 aggatttctt cttcacgcca atgctgttgc agttgttcga ccagccattg cggcaattct
      961 gcggcggtat tcaggccgtc tgaaaactcg gttttacggg ctttcaaatt gccgaggaac
     1021 gctgtttctt cttcatcaaa caggtctttg atttggctga tgttggtgct tctgccgaga
     1081 accagtgcgg cgagtgcggc tttgcgcggc tgtgcgtgcg gacggcgcag ggcagtgctg
     1141 attttttgat agtggcgcag cgcggcaaag gcggtttcgg cgatttcgtg gcggtcttgg
     1201 cggccgagct ttttatgttc gcggaaatag gcggagagga cggcatcggc aggctgtttg
     1261 aaagtcagca tttcagccaa aactttggcg gtatggtcga gttgtgcggc gttcataatg
     1321 taatgggttc tcttactgtg ggttattcat aatcaatcta acgtccttaa aataacaata
     1381 gcatctttat cattacttag tattctatcc gcaataagaa agatgtgtta aaagtgcgca
     1441 atcgggattt gtctaaattt ctccgttaac tacaaaggca gcctgaaaaa agttctattt
     1501 tcaggtcgct tgaacagcat ccgatataat cacatcagcg atttcatttt gtaatcactc
     1561 cccaaaacat gaggaaaaaa acaaaattta ttttcttcgt tcagtatatc tatcctaaat
     1621 atgccatcac tccattgagt ttttaatttg tatttcgctc ttgttaaatg tttttctgtt
     1681 tgccgatttc ttttgctaat gtaaaaaata ctctaccact ctcattggtt aaagttttca
     1741 agtattcatc aacatcagta acattaataa caactgtttc atttgtatgt ttattaaatt
     1801 ctaaatcaat aataatattc ccattaacca atatttcata tatatcttct tcttcaggga
     1861 gcatagacaa acaataagca cttgaagctg aaaactcttt tttcagatac tgaagaagaa
     1921 aagtattttt aattaaaata ttattaaatt tatctaatga ttgcttgact tctttagttg
     1981 tccaattttt aacattattc ttcattgtat tctacctggg tcgtagttat taaattacca
     2041 tacttatttg tttggatcgt cataatatta gttggcatgt tgttgttata tttatcatat
     2101 ccaatatcct tattaactcg gatgactctt tcataaattg tatgggaaat gagatttcca
     2161 tcactaagcc tctcaataga tatacgcgtt aatgttggga aagggtttca gacggccttc
     2221 ataatgcgtt cgatttcgtg ccaaaagccg tccggccgac attccaaaac ggcaatcaag
     2281 ccttggtcga tacggcggat ttcggtttcg ttcaatgttt cggtttcggc ggcacgcgca
     2341 ggtgcgaggt aggccatgcg gtcgagcaga tggtagcgga cttcttggcg ttcaaacccg
     2401 tattccgccc aatcttgaat atagacgtcg cgccagccgt atggattaag cggcggctca
     2461 aaagcatgga aaccttgcgg aaaaaatccg atgccgcgca cgatggaaac gggttttacg
     2521 tcaagcggca gaccgtgttg ccgcaaggtt cggatgccgt ctgaagtgtg cggcagaccg
     2581 agttgggcgg tcagtttggc ggcttttccc aacagcgtgt ctttggggtc gagtccgcgc
     2641 atgtcttcga gcctgcccgt gccgccgccg taatatttgc aggtcagctc gatatggtag
     2701 ggcttgccgt taagccttac cacaaaatcc gccgcgcctt gcgtattgcc gtccgaaccg
     2761 gaaaccgtga ggttgtgcgc gagcagttcg gcgtgtggcg cgttggtaaa ccaaaatgcc
     2821 agcagttctt cggcgtaaat gccgaggcgg tgtccgaacg gggcgcgtcg ggtgaggtgt
     2881 tccgtcagcg gcgcgggatc ggcatccaat gccaaaagat agcggaaacc gcgttccccc
     2941 aatagttcgc gcacgcccaa ttcgcaaccg ctttgccaca aaggcggcgc agtcagcagc
     3001 gaggcgaggt cgcggacggg ttggctggtg agcttccacc ataatgcgtc tagggcgtaa
     3061 ttcatgctta tccgaatatc agtcatgccg tctgaaaagc tggaaatgtt ttcagacggc
     3121 cttaatcagt cttttttatg gatacgatgg ctgacggtat tgaaaaaacc gcgcaggata
     3181 tcgatgtctt cggtttgcgt gttggcgcgt ccgaacaggc tctgcatacg gcgcatcaga
     3241 cgctcgccgt tgcggcggtt gaaaaagccg atgtcgttca tcacgctttc catgtgggcg
     3301 accatgcctt tgatttgctc gtgggtcgca gcgtggtctt cttgttgaag atgggtcatg
     3361 ggcgaaccgg tttggctgaa gatttcgtag cacacgacct gcacggcttg ggcgaggttg
     3421 agcgagaaat agtcgggatt gccgttgatg gtcatcagtc ggttgcaggc ttggacttct
     3481 tcgatgctca agccgaaagt ctcgttgccg aaaaccagtg ccactttctc gcctcggttt
     3541 gcggtctgca gtaattcgga taccaaatcg cgcggggttt gcagcggcgc agtaatttcg
     3601 cggcggcggc tggtcagggc gcaggcgatg gtggtgtcgg caagggcttc gtccaaagaa
     3661 gcggcaatgg tggcattttc caaaacgtct gccgcgccgg aagcgaggat gaagctttct
     3721 tccggtaatt taaacgattg aggatgctcc gggtcaaaca cgggcgggtt ttccgtcatc
     3781 ggcgttgcca tcagatttgg ggcgacgatg gtcagtttgt gcagacccat tgttttcatc
     3841 gcgcgcgcgg cagagccgat gttggcggga tggctggtgc gcgtgaggat aatgcggatg
     3901 ttgccgagat agtcgggcag ggcgggtttg agagtagtca tgttcggttt tcggtcggaa
     3961 tggaataggg tataatgcgc cgtctttttc gttcggacgg tcaaatgccg tctgaaatgt
     4021 tctttaacaa cgtcggaaat ttaacgttgc gcctgaagca gacacgcgtc gggcggtatt
     4081 ttacccgatt tggcaggatt taccccaacc aaataaactc cgattttgcc gctccgaagg
     4141 actgcacgtc cgaaccggcg gtatgccacc cttaaggaaa tctgatgaat ccgtttttga
     4201 atacagcctt taaagccgcc cgccgtgccg gtcagatgat gatacgcgcc gcgggcaatc
     4261 tcgatgccgt caaaaccgac agcaaagcat tcaacgattt tgtttccgat gttgaccgca
     4321 attccgaaat catcctggtt gaggctttga aagaagccta tccgcaccac aaaatcactt
     4381 gcgaagaaag cggctcccac ggtaaagccg cagccgaata cgaatggatt atcgatccgc
     4441 tcgacggcac gaccaacttc cttcacggcc atccccaata cgccatctct atggcactcc
     4501 tgcacaaagg cgtgttgcaa gaagctttgg tgtacgcccc cgaacgcaac gacgtttaca
     4561 tggcttcgcg cggcaaaggc gcgttgctca atgaccgccg catccgcgtt tccaaccgca
     4621 tcgaattgaa ccgctgcctg atcggtaccg gctttcctgt tgtcgatcaa agcatgatgg
     4681 acaagtatct ggcgattttg aaagatttct tggcaaaaac cgccggcggc cgtcgtgaag
     4741 gcgcggcttc tttggatttg tgtgctgtgg cgactggtcg ttttgacggc tttttcgagt
     4801 tcaacctcaa accttgggat attgccgcag gcgcattgat tgttcaggaa gcgggcggta
     4861 tcgtaaccga tatgacgggt gaagacggct ggctggaaag cggcgatgtt gtcgctgcca
     4921 atcccaaagt actggcgcaa atgttgaaaa tcatttccgc acacgtttaa atttcagccc
     4981 gctcccggga atgcgggaaa acgggcgggt atgccgtctg aagtatcgcg ccgatatttc
     5041 agacggcatt tttactggca gcgggggcag gaaggtggaa acggctaaat gcccgaaact
     5101 gccgaagatg gaaacccata tctgattaaa cggagaaccc tgtacgattt gtttatagtg
     5161 gattaacaaa aaccagtacg gtgttgcctc gccttagctc aaagagaacg attctctaag
     5221 gtgctgaagc accaagtgaa tgggcaaagc caacgccttt accgcaccga ttaccgtcgt
     5281 caattacgac gaacaagccc tcaataacac cgaagcgcgt actttggtgg atgccgtagc
     5341 gaaaaaagac gcttccgttt ggcagttcgg cggcgaaagc aacacgctga ccggtctgta
     5401 tttcagaggt tatcagcttg actcgcgcca attcagcgtc aacggtttgg caggtatgta
     5461 cggcacgcaa ggcacggcca gcgtgcaagt cggctcggca caactgatta aaggcgcgtc
     5521 caccgccgta aacggcatgg accctgaagg cgcggtatcc ggttccgtca atattgaaac
     5581 caaaaaagcc gccgacgaag acaaccgcaa aatcggtttg ggctggttta gcaacaaccg
     5641 cgcccaaggt acgttcgact tgggtcaacg cttcggcgaa aacaaagaat tcggcgtgcg
     5701 cgccaacggc aaactgcgcc atggcgacac cccgcgccac ggttacagcg aagacaacaa
     5761 agaatttgca ttgaatgctg attatcgcgg cgaaaaagtg cgcgtggcgt tcgactccat
     5821 ctacgcgaaa cgcaaaacca acggcggccg cgcgcgtatg caggatattc aaaacgccgg
     5881 cggccgcttg tttgacgcgc cagacggcaa aatcaacctg ctgctttcgt ggaactggca
     5941 aaacaccgtc ggcgaaacca atatgctgac ctttgaatgg gatgcgtttg acaatgccca
     6001 aattaccggc ggtatcggct acaacaaggc gcgttattac ggcacactga tttccccgac
     6061 cgtttgcggt acaagcggtg cgagcgacca aaccgctacc tgcacaagtg ccaagcaata
     6121 ccacaccggc acggcgagcc tgaccgacca atatttccgc acattgagta tgaacctgac
     6181 cgcacgcggc gaatttgaaa ccggcccggt aacacataac tggagtatgg ctttcgaccg
     6241 cgttatccgc cagcggaaaa ccataaacgg cagcgggaac ggcaacagca agatagaagt
     6301 gaaggcaaac gaaaatattg cgaatcaatt ggcatcgttt acagccgact atcccaattc
     6361 ttgggagaac tctgccaatt tggatgccaa tatcaaagtc aacagcctgg ctttgtccga
     6421 caccttgggc ttcgtggata acaaataccg cctgactttg ggcggacgtt tccaaacagt
     6481 cgaatatacc gacaaaaaat cacagagcgg cgatgccaaa cgtttcagcc cgatgctgat
     6541 ggcggcgtgg gtgccgcaac ctgatttggt tgtgtacggc aactatatgg aagacttgga
     6601 gcctgccgac atcaaaaccg atgattccgg cgaaacgaca atggcgaaac cgcgtgtcag
     6661 ccgccagttt gaagtgggcg tgcgtaaaaa ctggggcaat ttcgtaacca cgttaaacgc
     6721 gttccaaatc aaacgcccgg ctactggcgc ggtcatacaa ctaccaagac aacaaaaggg
     6781 gtaacaacaa cgctgaccta tggcaacaat tccgatttcg cccgctataa ggcgcaaggc
     6841 ggcgtagccg gcgacgagca aggtatggaa cgcaatcgcg gtatcgagtt caatgcctat
     6901 gctaacctgt taaacaaaac cctgcgtccg actttgggcc tgatgtatct gcaatcgacc
     6961 gtgaaagact acccaaattc acgcgatatg ctggttaacg gcgtacaagt cgccaatccg
     7021 cgcgtaattg ccaaggcagg tttggaatgg gatacaccgt ttgccaaagg cttgacttta
     7081 aacagcaatg tttcgtattt cggcaagtct taccaagaca cgcaaaaaca atacgccttc
     7141 ccatcctata ccttggttga tgtaggcgcg cgctacaaaa ccaagctcgg caaaaatacg
     7201 ttgaccgtca gcagctcggt ggaaaatctg ttcaacaaaa actactggca ggtacagcgc
     7261 ggccaatacg accgcagctt cgccgtcgtc ggtctgccgc gtacttactg gctgaaggcg
     7321 gaattggatt tctgatttct ccgcatctgg aaaatgccgt ccgaacaggt ttcagacggc
     7381 atttctttta aagagatatg gcgggatacg cttaaataat gctattctag cgtctttgaa
     7441 acctgcttgt ttgaagtgat gaaaaaacct ttgatttcgg ttgcggcagc attgctcggc
     7501 gttgctttgg gcacgcctta ttatttgggt gtcaaagccg aagaaagctt gacgcagcag
     7561 caaaaaatat tgcaggaaac gggcttcttg accgtcgaat cgcaccaata tgagcgcggc
     7621 tggtttacct ctatggaaac gacggtcatc cgtctgaaac ccgagttgct gaataatgcc
     7681 cgaaaatacc tgccggataa cctgaaaaca gtgttggaac agccggttac gctggttaac
     7741 catatcacgc acggcccttt tgccggcgga tttggcacgc aggcgcacat tgaaaccgag
     7801 ttcaaatacg cgcctgaaac ggaaaaagtt ttggaacgct tttttgggaa acaagctccg
     7861 gtttcccttg ccaataccgt ttattttaac ggcagcggta aaatggaagt cagtgttccc
     7921 gccttcgatt atgaagagct gtcgggcatc aggctgcatt gggaaggatt gacgggaaaa
     7981 acggtttatc aaaaaggttt caaaagctac cgcaacagct atgatgcgcc cttgttcaaa
     8041 atcaagctgg cagacaaagg cgatgccgcg tttgaaaaag cgcatttcga ttcggaaact
     8101 tcagacggta tcaatccgct tgctttgggc agcagtaatc tgaccttgga aaaattctcc
     8161 ttagaatgga aagagggtgt cgattacaac gtcaaattga acgaactggt caatctcgtt
     8221 accgatttgc agattggcgc gtttatcaat cccaacggca gcatcgcacc ttccaaaatc
     8281 gaagtcggca aactggcttt ttcaaccaag accggggaat caggatcatt tatcaacagt
     8341 gaagggcagt tccgttttga cacactggtt tacggcgatg aaaaatatgg cccgctggat
     8401 atccatatcg ctgccgaaca tctcgatgct tctgccttaa ccgtattgaa acgcaagttt
     8461 gcacaaattt ctgccaaaaa aatgactgaa gaacaaatcc gcaatgattt gattactgca
     8521 gtcaaaggcg aggcttccgg attatttacc cataacccgg tgctaaatat caaaactttc
     8581 cgtttcacgc tgccgtcggg aaaaatcgat gtgggcggaa aaatcatgtt taaagacatg
     8641 aagaaggaag atttgaacca attgggactg atgttgaaga aaaccgaggc agacatcaga
     8701 atgagtattc ctcaaaaaat gttggaagat ttggcggtaa gtcaggccgg aaatattttc
     8761 agtgtaaatg ccgaagatga ggcggaagcc agagcaagca ttgcagatat taatgaaaca
     8821 ttgcgcctga tggtggacag tacggttcaa agtatggcaa gggaaaaata tcttacttta
     8881 gacggtaatc agattgatac ggttatttcc cttaaaaaca acgccctgaa gttaaacggg
     8941 aaaacgctgc aaaatgaacc tgatcccgat tttgatgagg gcggtatggt ttcagagccg
     9001 cagcagtaat gggtcaaatg ccgtctgaaa tgttcaggcg gcattttgtt gtattggaaa
     9061 ctgccgtttt caaccattcc tttagataag ccgtgtcgga ttc
//
LOCUS       DAWKOX010000074         9091 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.074, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000074 DAWKOX010000000
VERSION     DAWKOX010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9091
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.074"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(149..484)
                     /locus_tag="WJK78_001205"
     CDS             complement(149..484)
                     /locus_tag="WJK78_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ7598136.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            613..1518
                     /gene="mtrA"
                     /locus_tag="WJK78_001206"
     CDS             613..1518
                     /gene="mtrA"
                     /locus_tag="WJK78_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HEZ7598137.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     VVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1580..2068)
                     /locus_tag="WJK78_001207"
     CDS             complement(1580..2068)
                     /locus_tag="WJK78_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ7598138.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2215..3117
                     /locus_tag="WJK78_001208"
     CDS             2215..3117
                     /locus_tag="WJK78_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7598139.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPCWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3158..4288)
                     /locus_tag="WJK78_001209"
     CDS             complement(3158..4288)
                     /locus_tag="WJK78_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7598140.1"
                     /translation="MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4493..7117
                     /gene="alaS"
                     /locus_tag="WJK78_001210"
     CDS             4493..7117
                     /gene="alaS"
                     /locus_tag="WJK78_001210"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ7598141.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYVSDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSMD
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVKEMGDAYPELKEKQVQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVDELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAILANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELAKAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSDNA
                     VILLAAVNDGKVSLCAGVSKPLTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPEMLVSVESWLCQKLS"
     gene            7179..7910
                     /locus_tag="WJK78_001211"
     CDS             7179..7910
                     /locus_tag="WJK78_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598142.1"
                     /translation="MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYH
                     SSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDK
                     NYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEV
                     LSAAQSLANIYCNKVRLIDGHVWKE"
     gene            8217..>9091
                     /locus_tag="WJK78_001212"
     CDS             8217..>9091
                     /locus_tag="WJK78_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7598143.1"
                     /translation="MKTLLQLQTAAQNFAAYYKDQTDERREKDTFWNEFFAIFGIDRK
                     NVAHFEYPVKDPADNTQFVDIFWEGIFLAEHKSANKNLTKAKEQAERYLQEIGRTKPS
                     ALPEYYAVSDFAHFHLYRRVPEEGVENQWQFPLEALPEYITRGVFDFMFGIEAKVRQI
                     QEEADIQAAAAIGRLHDALKEEGIYEEHELRLFITRLLFLFFADDSAVFQRNYLFQDF
                     LESCKETDTLGDKLNQLFEFLNTPDQKRSKTQSEKFKGFEYVNGGLFKERLRTFDFTA
                     KQHRALIDCGNFDWR"
BASE COUNT         2316 a         2388 c         2187 g         2200 t
ORIGIN      
        1 ttaatccact atatttcacg cttacccctt gtttctcaaa tgccgtctga aaaaaacggc
       61 tgtatatgtt gtctgcaaaa tatcgggaag cataacagac aaaatgccgt ctgaaatatt
      121 ttcagacggc atttcaatcc gattcggatt atttttgcgt ttcaaccgct tccaatgcac
      181 gcagggcgta agtgtaagcg gcaccggcat tcagggcgat ggcggttgcc aatgcgccgg
      241 cgatttcgct gtcggtcgca ccggctttgg cggcggcggc ggcgtgaaca ctgatgcagc
      301 tctcacaacg tgtggtaatg gcaacggcga tggcaatcag ttcgcgcgtt ttggcatcaa
      361 gtgcttcggc ggcggcggcc tgttccaatg cgccgtaggc ctgcagcatt ttaggatgcg
      421 ccttacccag ctcgccgaac gattttttaa ccaatgcggt atgttctttc caatctttaa
      481 acattttctt ttcctttctc ttgcgtttaa ccctgatacg cgcttgcgta tctgttttcg
      541 atgtgcgtat tattgcaatt attcagttgt gtttctcgtt taatcatctc attttatggt
      601 tcaaaaagat ttatggacat tctggacaaa ctggtcgatt tcgcccaatt gacgggcagt
      661 gtggatgtgc agtgcctttt gggcggacaa tggtcggtac ggcatgaaac cttgcaacgc
      721 gaaggattgg tacacattgt tacatcgggc agcggctatc tctgcatcga cggcgaaact
      781 tccccgcgtc cggtcagtac aggggatatt gtatttttcc cgcgcggctt gggtcatgtg
      841 ttgagccacg acggaaaatg cggagaaagt ttacaaccgg atatgcggca gcacggtgcg
      901 tttacggtca aacagtgcgg caacggacag gatatgagcc tgttttgcgc ccgtttccgc
      961 tacgacaccc acgccgattt gatgaacggg ctgcctgaaa ccgtttttct gaacattgcc
     1021 catccgagtt tacagtatgt ggtttcaatg ctgcaactgg aaagcaaaaa acctttgacg
     1081 gggacggttt ccgtggtcaa cgcattgtcg tccgtcctgc tggtgcttat cctgcgcgcc
     1141 tatctcgaac aggataagga tgtcgaactc tcgggcgtat tgaaaggttg gcaggacaaa
     1201 cgtttgggac atttaatcca aaaggtgata gacaaaccgg aagacgaatg gaatgtcgac
     1261 aaaatggtgg cggctgccaa tatgtcgcgc gcacaactga tgcgccgttt caaaagccgg
     1321 gtcggactca gcccgcacgc ctttgtgaac catatccgcc tgcaaaaagg cgcgttgctg
     1381 ctgaaaaaaa acccggattc ggttttgtcg gtcgcactgt cggtaggctt tcagtcggaa
     1441 acgcacttcg gcaaggcgtt caaacggcaa tatcacgttt cgccgggtca ataccggaaa
     1501 gaaggcgggc aaaaataaat cggggcttca aacgcaaatg ccgtctgaaa aggctttcat
     1561 acagcatttg cgtaccgcgt catttcaagg gctgcatctt catcacttcc atcaaaaagt
     1621 tggtaaatgc ggggttgttg ggtttgacat ccatattttt ccaacgctgc tgccagccgc
     1681 gcaaggcatt ctggatatac agcttggact gttccgtatt gattgcgccc cgctggctgt
     1741 ctatcgccga acgcaggtag atttcataca tactgtcatc gacggcattg cgtccgacca
     1801 ggcgttttct gaagttgttc agatattgcg ccgcctgaac cttggtcatt ttaccgatac
     1861 ccacctgata gcccaagcgc gtcgcttcat cgctgatttt ggcaacatcc gtccaatgcg
     1921 aagaggcaag gcggaaacct tttgcaggtg cttccgtttt gacggtattg ataggattca
     1981 cggggatttc cgtcaatgtg ggcacataaa tagactggca gccggaaaga actgccacaa
     2041 tggaaagagg gataaggtat tttttcatgc ccccattata atcaagtttg ccttgagaaa
     2101 acaaattgtt cggcaagaaa aataaaattt cggcatcaga agcaggcaaa aacacattcc
     2161 acaagccttg ccgcaaggtt tacaatccga ccgtccttat cgcaacgacc gtttatggat
     2221 accgcaaaaa aagacatttt aggatcgggc tggatgctgg tggcggcggc ctgctttacc
     2281 attatgaacg tattgattaa agaggcatcg gcaaaatttg ccctcggcag cggcgaattg
     2341 gtcttttggc gcatgctgtt ttcaaccgtt gcgctcgggg ctgccgccgt attgcgtcgg
     2401 gacaccttcc gcacgcccca ttggaaaaac cacttaaacc gcagtatggt cgggacgggg
     2461 gcgatgctgc tgctgtttta cgcggtaacg catctgcctt tggccaccgg cgttaccctg
     2521 agttacacct cgtcgatttt tttggcggta ttttccttcc tgattttgaa agaacggatt
     2581 tccgtttaca cgcaggcggt gctgctcctt ggttttgccg gcgtggtatt gctgcttaat
     2641 ccctcgttcc gcagcggtca ggaaacggcg gcactcgccg ggctggcggg cggcgcgatg
     2701 tccggctggg cgtatttgaa agtgcgcgaa ctgtctttgg cgggcgaacc ctgctggcgc
     2761 gtcgtgtttt acctttccgt gacaggtgtg gcgatgtcgt cggtttgggc gacgctgacc
     2821 ggctggcaca ccctgtcctt tccatcggca gtttatctgt catgcatcgg cgtgtccgcg
     2881 ctgattgccc aactgtcgat gacgcgcgcc tacaaagtcg gcgacaaatt cacggttgcc
     2941 tcgctttcct atatgaccgt cgttttttcc gccctgtctg ccgcattttt tctgggcgaa
     3001 gagcttttct ggcaggaaat actcggtatg tgcatcatca tcctcagcgg cattttgagc
     3061 agcatccgcc ccactgcctt caaacagcgg ctgcaatccc tgttccgcca aagataaaaa
     3121 atgccgtccg aacatccttc agacggcata tcgggcttta tttccccgcc ttcacatcct
     3181 gccactggcg caccataaac ttcaatgccg ccggctggat aggcaccatg ataaagctgt
     3241 ttttcaaatc ctcctcggtt gggaaaatcg tattgtcgtt tttaaattcg tcttccatca
     3301 gctcacgcgc cggcttgctc gaaggcgcat aagtaacgaa attgccgttt ttcgccgaca
     3361 cttccgggtc gaggaagtcg ttgatgtatt tgtgcgcgtt ggcgacgttt ttcgcatctt
     3421 tcggaatcac gaaagaatcc acccaaatcc ccacgccctc tttgggcatc atcacgcgga
     3481 ttttttcctt gccgcccgct tcttcggcac ggcgtttggc gatgttcaaa tcgccgccga
     3541 aaccgattgt tacgcaggta tcgccgcgcg ccaaatcatc gataaagccg gacgaagtaa
     3601 agcgtttgat attggggcgg tttttcttga gtagggcggt tgcctccctg atgtcttccg
     3661 tattgctgct gttcgggttt ttacccaaat agttcaacac cataggatag atttccgccg
     3721 cgctgtccaa atagctgatg ccgcattgct tgagtttgga cgtgtattcg gggtcgaaca
     3781 ccaaatccca ctggttgtcc ggcagcttgt ccgtacccaa agcctttttc acgcgttcgg
     3841 tattgatggc gaaggtattt gtcccccaat aaaacggcac ggcgtattcg tggccgggat
     3901 cgaccccgtc catcagcctc atcatttcgg ggttgaggtg tttataattg ggaatcagcg
     3961 acttatcgat tttctgatac gcacctgcct taatctgcct gcccacaaac gcattggacg
     4021 gcgcgacaat gtcgtaacca gattttccgg tcagcacctt gctttccagc gtttcatcgc
     4081 tgtcgtacac atcataagta accttgatgc cgtttttctt ttcaaaatcg gcaacggttt
     4141 ccggatcgac gtattccgac cagttgtaaa ttttcaatac gtttcggttt tccgccggcg
     4201 ccggtttttc ggcaggcggt ttgtccgaac cgccgcacgc tgcaagcagc aaagcagtca
     4261 ggacggccag gggcagatgt ttggtcatta tcattccttg catatcgggt tggagaaagc
     4321 ggccattata gccgatattg gcaacagggc ttcagacggc attcaaaatc ccgccacact
     4381 cttccgaaaa ccgccgcttc catagctaga aacagggatt tgcggtaaga taccgccgtt
     4441 cgttttccct gcttttacca tgacaagaca tttgagagac attgaaaaaa ttatgaaaac
     4501 ctccgaactg cgccaaaaat tcctaaaatt ttttgaaacc aaaggccaca ccgtcgtccg
     4561 ctcttccagc ctcgtgccgc acgacgaccc gaccctgctg tttaccaacg cgggcatgaa
     4621 ccagtttaaa gacgtattct taggtttcga caaacgcccg tacagccgcg ccaccaccgc
     4681 gcaaaaatgc gtacgcgcag gcggcaagca caacgacttg gaaaacgtcg gctacaccgc
     4741 ccgccaccac accttctttg aaatgatggg caacttctcc ttcggcgact acttcaaacg
     4801 cgacgccatc cacttcgctt gggaatttct gacttccccc gaatggctca acatccctaa
     4861 agacaaactg ttggcgaccg tttacgcgga agacgacgaa gcctacaaca tctggttgaa
     4921 cgaaatcggt atgccgtccg agcgcatcgt ccgcatcggc gacaacaaag gcgcgaaata
     4981 cgtgtccgac aacttctggc aaatgggcga caccggccct tgcggcccct gctccgaaat
     5041 tttctacgac cacggcgaag aaatctgggg cggcattccc ggcagccccg aagaagacgg
     5101 cgaccgctgg atcgaaattt ggaactgcgt atttatgcag ttcaaccgcg acgaacaagg
     5161 caatatgaat ccgctgccca agccgtccgt cgataccggt atgggcttgg aacgtatggc
     5221 cgccgtcatg cagcatgttc acagcaacta cgaaatcgac ttgttccaag acctgctcaa
     5281 agccgttgcc cgcgaaaccg gcgcagcttt cagcatggat gaacccagcc tgaaagtcat
     5341 cgccgaccac atccgctcct gctcgttctt gattgcagac ggcgtgttgc cttccaacga
     5401 aggccgcggc tacgtattgc gccgcatcat ccgccgcgcc gtgcgccacg gttacaaact
     5461 gggtcaaagc aaaccgttct tccacaaact ggtggccgat ttggtcaaag agatgggcga
     5521 tgcctaccct gaattgaaag aaaaacaagt tcaaatcgaa gaagcgttga aaaacgaaga
     5581 aagccgtttt gcccaaacgc tggaaaccgg tatggctttg ttggaaaacg cgttggctaa
     5641 aggcggcaaa acactcgacg gcgaaatcat cttcaaactc tacgatactt acggtttccc
     5701 atacgatttg accgccgaca tctgccgcga acgcaatatc gaactggacg aagcaggctt
     5761 cgagcgcgaa atggaagccc aacgcgcacg cgcacgcgcc gcccaaagct tcaaagccaa
     5821 cgcccaactg ccttatgacg gtcaagacac cgagtttaaa ggttatagcg aacgccaaac
     5881 cgaatccaaa gtcctcgccc tctacaaaga cggcgagcaa gtcgacgaat tgaacgaagg
     5941 cgacagcggc gcagtcgtca tcgactttac cccgttctat gcagaatccg gcggccaagt
     6001 cggcgacgtc ggctatatct tctcaggcga aaaccgcttt gaagtacgcg atacccaaaa
     6061 aatcaaagca gccgtattcg gccaattcgg tgtacaaact tcaggccgtc tgaaagtcgg
     6121 cgacagcgtt accgccaaag tggacgacga aatccgcaat gccaatatgc gcaaccacag
     6181 cgcgacccac ctgatgcaca aagccctgcg cgacgtattg ggcgaacacg tcgaacaaaa
     6241 aggctctttg gttaccgccg aatccacccg tttcgacatt tcccatcccc aagcggtaac
     6301 tgccgaagaa attgccgaag tcgaacgccg cgtcaacgaa gccattttgg cgaacgttgc
     6361 cgtcaatgca gccattatga gcatggaaga cgcgcaaaaa accggcgcga tgatgctttt
     6421 cggcgaaaaa tacggcgacg aagtgcgcgt actgcaaatg ggcggtttct caaccgaatt
     6481 gtgcggcggc acacacgttt cacgcaccgg cgacatcggc ctcttcaaaa tcatcagcga
     6541 aggcggtatt gccgcaggcg tgcgccgtat cgaagccatc accggcctga acgcactcaa
     6601 atgggcgcaa gagcaagagc gtttggtgaa agacatcatt gctgaaacca aagcccaaac
     6661 cgaaaaagac gtactggcga aaatccaagc aggcgcggca cacgccaaag ccttggaaaa
     6721 agagttggca aaagccaaag ccgaactcgc cgtccacgca ggcgcaaaac tcttggacga
     6781 cgcaaaagac ttgggcgcag ccaaactcgt tgctgcccaa atcgaagccg acgcagccgc
     6841 cctgcgcgaa atcgttaccg atttaaccgg taaatccgac aacgccgtga ttcttttagc
     6901 ggcagtaaac gacggcaaag tctccctgtg cgccggcgta tccaaaccgt tgaccggcaa
     6961 agtgaaagca ggcgatctgg ttaaatttgc agccgaacaa gtcggcggca aaggaggcgg
     7021 ccgtcccgac ttggcgcagg ccggcggcac ggatgccggc aaattgcccg aaatgctggt
     7081 aagcgtggaa agctggcttt gtcagaaatt aagttaaatt taaatcttaa taagccattt
     7141 gagtcttgtt caaatggctt atattttgga ttgttagaat gaatactaaa acagagttac
     7201 aaaaactttt agaagaggat atatcaactt taacagaaac actaatttgt gcagatgctc
     7261 ttcctccaag atatgtacgt agcattgcaa ctcctattgt ccgtcgatgg ttaattgaca
     7321 aacaattaaa tattctcgca aaagaaatag gtttaactat agaattgccc atccttgata
     7381 caagtttggt atttgaaaaa ttgtcaacct tagagaataa agttaatttt tatatggctg
     7441 gtggagttta tttaggcgga gaatttatta gctctatata tcattcatca caagaatttt
     7501 ctggtgaacc aataatctat gctgaaccaa atataatttt atgtcctgct gaaaaatttt
     7561 taactttaaa acgagttttc cataatggaa atatttttaa tatgaatcag ataattactt
     7621 ttttatccaa taaacaagga ggagtacatt ttgataaaaa ttacgataaa tataaaactt
     7681 ggcaagttgc tatagaaaaa gcagcaaatt ttttaaaact cggtaatcca tataatgaag
     7741 ataaattatc tcttagtgaa gaacatgata ctattttagt agttttacca ttagaaaaag
     7801 gatatgaatg gaattgtctt gagatagaag tactatccgc tgctcaatct ctagcaaata
     7861 tctattgcaa caaagttcgc ctcatagatg gtcatgtttg gaaggaataa aagaaaaagc
     7921 atagttggta atttttagtt acgtagggtg ggcttcagcc caccgttttt tcatttttga
     7981 ttgttgattg gtgggctaaa gcccacccta cggttactaa aatcccgtca ttacctcgca
     8041 ggcgggaatc cggtttgttc ggtttcggtt ttttagggac agtgccgcaa cattaaattt
     8101 ccagattccc actttcgcac aaataacagc gcaaataggg caaagataag gatatgggtt
     8161 tttttctttg aatttactat acaattcgcc cgtccccgtt atagaaaccc aagccgatga
     8221 aaaccctgct ccaactccaa accgccgcac aaaacttcgc cgcctactac aaagaccaaa
     8281 ccgacgaacg ccgcgagaaa gacaccttct ggaacgaatt tttcgccatt ttcggcatcg
     8341 accgcaaaaa cgtcgcccac ttcgaatacc ccgtcaaaga ccctgccgac aacacccaat
     8401 tcgtcgatat attttgggag ggcatcttcc ttgccgaaca caaatccgcc aacaaaaacc
     8461 tgaccaaggc caaagagcag gcggagcgtt atttgcagga aatcgggcgc accaagccct
     8521 ctgcgctgcc cgaatattac gccgtcagcg attttgccca tttccacctt tatcgccgcg
     8581 tacctgaaga aggcgtggaa aaccaatggc agttcccttt ggaagcattg cccgaataca
     8641 tcacgcgcgg cgttttcgac ttcatgttcg gcatcgaagc caaagtccgc caaattcaag
     8701 aagaagccga tattcaagcg gcggcggcca tcggcaggct gcacgacgcg ctcaaagaag
     8761 aaggcattta cgaagaacac gagctgcgcc tcttcatcac gcgcctgctt ttcctctttt
     8821 ttgccgacga cagcgccgtt ttccagcgca actatctctt tcaagacttt ttagaaagct
     8881 gcaaagaaac cgacacgctc ggcgacaagc tcaaccaact ctttgaattc ctcaacacac
     8941 ccgaccaaaa gcgcagcaag acccaaagcg aaaaatttaa aggtttcgaa tacgtcaacg
     9001 gcggcctgtt taaagaacgc ctgcgcacct tcgacttcac cgccaagcag caccgcgcct
     9061 taatcgactg cggcaatttc gactggcgca a
//
LOCUS       DAWKOX010000075         8971 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.075, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000075 DAWKOX010000000
VERSION     DAWKOX010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8971
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.075"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            207..1130
                     /locus_tag="WJK78_001213"
     CDS             207..1130
                     /locus_tag="WJK78_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ7598144.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(1195..2583)
                     /gene="fumC"
                     /locus_tag="WJK78_001214"
     CDS             complement(1195..2583)
                     /gene="fumC"
                     /locus_tag="WJK78_001214"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ7598145.1"
                     /translation="MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(2724..4703)
                     /gene="tkt"
                     /locus_tag="WJK78_001215"
     CDS             complement(2724..4703)
                     /gene="tkt"
                     /locus_tag="WJK78_001215"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ7598146.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPDNF
                     DEYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGIKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLDDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQAAVLPESLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            5230..6726
                     /gene="ccoG"
                     /locus_tag="WJK78_001216"
     CDS             5230..6726
                     /gene="ccoG"
                     /locus_tag="WJK78_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ7598147.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            6729..7277
                     /locus_tag="WJK78_001217"
     CDS             6729..7277
                     /locus_tag="WJK78_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ7598148.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(7618..8793)
                     /locus_tag="WJK78_001218"
     CDS             complement(7618..8793)
                     /locus_tag="WJK78_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ7598149.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQANAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
BASE COUNT         1944 a         2183 c         2571 g         2273 t
ORIGIN      
        1 gcaacgctgt actggttttt gttaatccac tatattttaa aattcaggcg gtgttttcaa
       61 atagcgcgaa gcaatagccg agcttcagcc ggtttgtttg aaatcaaagg gttggaatta
      121 aacgccaaac gcttgaacca ttattgcccg atgcggcaaa ccggcatcgt ccggcaatac
      181 ggttgtttaa aaataggaaa atcaggatgg aaaaccaaag gccgctccta ggcttcgcgt
      241 tggcactttt ggcggcgatg acgtggggaa cgctgccgat tgccgtgcgg caggtattga
      301 agtttgtcga tgcgccgacg ctggtgtggg tgcgttttac cgtggcggcg gcggtattgt
      361 ttgttttgct ggcactgggc gggcggctgc cgaagcggcg ggatttttct tggtgctcat
      421 tcaggctgct gctgctcggc gtggcgggca tttcggcaaa ctttgtgctg attgcccaag
      481 ggctgcatta tatttcgccg accacgacgc aggttttgtg gcagatttcg ccgtttacga
      541 tgattgttgt cggtgtgttg gtgtttaaag accggatgac tgccgctcag aaaatcggct
      601 tggttttgct gcttgccggt ttgcttatgt tttttaacga taaattcggc gagttgtcgg
      661 gtttgggcgc gtatgcgaag ggcgtgttgc tgtgtgcggc aggcagtatg gcatgggtgt
      721 gttatgccgt ggcgcaaaag ctgctgtcgg cgcaattcgg gccgcaacag attctgctgt
      781 tgatttatgc ggcaagtgcc gccgtgttcc tgccgtttgc cgaaccggca cacatcggaa
      841 gtttggacgg tacgttggcg tgggtttgtt ttgcgtattg ctgcttgaat acgttaatcg
      901 gttacggctc gttcggcgag gcgttgaaac attgggaggc ttccaaagtc agcgcggtaa
      961 caaccttgct ccccgtgttt accgtaatat tttctttgct cgggcattat gtgatgcctg
     1021 atacttttgc cgcgccggat atgaacggtt tgggttatgt tggcgcactg gtcgtggtcg
     1081 ggggtgcggt tacggcggcg gtgggggaca ggctgttcaa acgccgctag ttcgcaggca
     1141 acggaaaatg ccgtctgaac gaggtttcag acggcatttt atttgaggga aagattagcg
     1201 cggatgaacc atatcggcag gaacgaccag ttcgtcaaat tcttcgcccg tcagcaagcc
     1261 cagctcaacg gcggtttcgc gcaacgattt gttgtttttg taggcggttt tggcgacttt
     1321 ggcggcgttt tcgtaaccga ttttgcggtt caacgcggta acgagcatca gggaatggtg
     1381 caggaaatag tcgatttttt ccggtacggg ttcgatgccg acggcgcagt gttcgttgaa
     1441 gctgttgcac gcgtcgccca agaggcggat ggattgcaag aggttgtagg cgataacggg
     1501 catatagacg ttcagctcga aattgcccga cgcgcccgcc ataccgatgg taacgtcgtt
     1561 gccgaacact tggcagcaca ccatcgtcat tgcttcgcat tgggtcgggt tgactttgcc
     1621 cggcatgatg gacgaacccg gctcgttttc ggggattttg atttcgccca aaccgcaacg
     1681 cgggccgctt gccagccagc ggatgtcgtt ggcgatttta ttcaggcttg ccgccagcgt
     1741 tttcaatgcg cccgaagcgg caacggcggc atcgcgtccg cctaaggctt caaatttgtt
     1801 cggcgcgctg acaaacggca agccagacag ttcggcgagt ttagcagcag ctttttcggc
     1861 gtattcggga tggctgttca aacccgtgcc gaccgccgta ccgcccaaag caagttcata
     1921 caagtcttta agcgcatcgt tcagacggcc taaaccgtga tcaagctggg aaacgtagcc
     1981 ggaaaattcc tgtcccaaag tcagcggcgt cgcgtcttgc aagtgggtgc ggccgatttt
     2041 gacgataggg gcgaaagctt gggctttttt gtccaacgtg tcgcgcaggg cttttacggc
     2101 ggggatgagg tggcggttga tttcaatcgc ggcggcaacg tggatagcgg tcgggaatgc
     2161 gtcgttggtc gattgcgcgt ggttcacatg gtcgttggga tggacgggct gataagccgc
     2221 caaacccgta ccggcgattt cgttggcgcg gtttgccagc acttcgttca tgttcatatt
     2281 ggactgcgtg ccggagccgg tctgccaaac cactaaagga aactgtccgt caagcctgcc
     2341 gttcaacaca tcatccgccg cctgcgtaat caaatccgcc tgttccggct taatcctgcc
     2401 gagggaaaca ttggtcgcgg cggcggcttt tttcaccagc gccaaagcat aaatcagcgg
     2461 ctgcggcagg gtttcgccgc cgattttgaa attgttgcgg ctgcgctggg tctgcgcgcc
     2521 ccaataggct tcggacggga cttcgacatt gcccatggtg tcatgttcgg tacgggtgct
     2581 catgcgtttc tccttttgaa atgtgaataa gagtgattcg caaatattat aatggagatt
     2641 ggcggaatga ggaagcatca aggcgggagg gcaaaaaaat gccgtctgaa aagcgttcag
     2701 acggcatttg tttaggtgtg gggttacagc acggatttca ccgtatcaac cacattgtcc
     2761 acggtaaagc cgaatgcttt gaagagtaaa tcggcagggg cggattcgcc gaagcggttg
     2821 atgccgacga ctgcgccgtt cagtccgaca tatttgtacc agccgtcggc gtggccggct
     2881 tctacggcga tgcgcggcag gctttcgggc aggacggcgg cttgataggc ggcgtcttgg
     2941 cggtcgaata cgttggtgga cggcatggaa acgacgcgca cggcgatgtt ttgcgcggcg
     3001 agggcttttt gcgcttccaa agccagctcg acttctgagc cggtggcaat gatgacggct
     3061 tgggcgttgc cttgggcttc gctgatgatg tagccgccgc gtttgatgtc gtccagttgt
     3121 tgttcgctgc gcgcttggaa tttcaggttt tgacggctga aaatcaggca ggacgggtga
     3181 tcggcggctt tgacggcttc tgcccaagcg accaaggatt cggcggtgtc gcacggccgc
     3241 catacgtcca tattcggaat caggcgcagg gtggcggttt gctcgatggg ttggtgggtc
     3301 ggaccgtctt cgcccaaacc gatggaatcg tgggtgaaca caaatacagg gttgattttc
     3361 atcagtgccg ccatacgcag ggcgttgcgc tcgtattcgc tgaacatcag gaaggtcgca
     3421 ccgaatggtt tgatgccgcc gtgcagggca agaccgttca taatcgcacc cataccgaac
     3481 tcgcgcacgc cgtagtggat gtagttgccg cctttgtcgc gggtaacgga gacgctgttt
     3541 gaccagtcgg tcaggttgga cggggtcagg tcggccgaac cgcccaccaa ttcaggcaac
     3601 tcttttgcca agatttcgat gctgttttgg ctggctttgc gggtagcgat ggtttcggct
     3661 ttggcgcaca cttctttcaa tgccgtctga acgtattcat cgaaattgtc cggcagcttt
     3721 ttatccatac ggcgcacaaa ttctgcggct tcggcaggat atttggcttg atattgcgcg
     3781 aacagttcgt tccagtcggc ttccagtttc gcgccttgtt ctttggcatt ccacgcatcg
     3841 taaatttctt gcgggatttc aaaggcgggg taagtccagc ccaaatgttt gcgcgtggct
     3901 tcgatttcgt ccgcgcccaa aggtgcgccg tgggttttgt ggctgccttc tttgttggca
     3961 ctgcctttgc cgattaaggt tttgcagcag atgatggacg gtttgccggt ttcggcacgt
     4021 gcggcttcga tggcggcttg aatggcggcg gtgtcatgac cgtttacgtt aggaacgacg
     4081 tgccagccgt agctttcaaa gcgttgcggg atgttttcgg taaaccagcc gtccacttta
     4141 ccatcaatgg aaatattgtt atcgtcatac aaaacaatca gtttgcccaa gcctaaagtg
     4201 ccggcgagcg aacaggcttc gtgcgatacg ccttccatca gacagccgtc gcccatgaag
     4261 acgtaggtgt aatgatcgac gatgttcaaa ccgtctttat taaattcggc ggcaaggatt
     4321 ttttctgcca atgccatacc caccgcgttg gcaatccctt gccccaacgg gccggtcgtg
     4381 gtttccacgc cgtcggtgta gccgtattcg gggtggccgg gggttttgct gtgcagctgg
     4441 cggaagtttt tcaagtcttc aatgctcaga ttgtagccgg tcaggtgcag caggctgtac
     4501 aacagcatag acgcgtggcc gttggagagg acgaagcggt cgcggttgta gaatttgggg
     4561 ttggcggggt tgtgattgag gaatttcgtc cacaatgttt ccgccatttc cgccataccc
     4621 ataggcgcgc cggggtggcc ggaattggct ttttgaacgg catcggccga gaggaagcgg
     4681 attgcgtttg ccagttgaga cattttgtat tttccttgct ggtgtttcag ataagtggat
     4741 aatcggaaag cgttgattat cgcccgattc gcttatgctt tcaagaaaag ggcggacgcg
     4801 tgggaaggcg gcggcagggg acaggcgggg aaggattttc gatttgcggg cgaagcctgc
     4861 cattattcct tttgaaataa aaagttatag attgtgtgcc ggattgtcga tagcgtttgt
     4921 ttatgagctt gcgccgtcgg ttctgccgat atgggggtgt cggttttttt agtctttttt
     4981 ttaaccgtat tcggattttg ttcgggcggt aaggtaaaat ccaggcgttt tgatgcggat
     5041 gggaaatgta tccgccccat acatccggac ggcgcataaa gttgtacaat agcggaaata
     5101 tattttggga aaaacggatt ttctcaaaac ttgaaacaca acgccttaaa aaacaagaaa
     5161 aatgacgtct gaaaagcaaa cggcggcggt aacgggcaaa ccatcaatca aaaatctaag
     5221 gaatgcagaa tgaccacgga aaaccaagcc ggcagtccgg catccggaat cggcacgtcc
     5281 gaacaaacaa aagccgcgcc gaaagcaaaa aaaacattcg atccgcgagc cagcgtgatt
     5341 caaatccatc ccgaaggcga acgcatccat cccaaaaagg cggaaggacg gttcgccaaa
     5401 ctgcgtatcg ccgccgtatt ggcgacgcag tttgtgtttt acgtcattcc gtggttcaac
     5461 tggagcggca ggcaggccgt cgttttcaat atccccgaac ggcatttctt cattttcgga
     5521 ttgtcgttgg gggtgggcga tttgatttac cttgccttgc tgctgatgat ttgcgccttc
     5581 gggctgtttt ggtggacgac gattgcaggg cgactgtggt gcggctattc ctgcccgcaa
     5641 acggtttaca ccgaaattat gctgtggatt gacaacctgg tcgaaggcga tagaaacaaa
     5701 cggctgaaac tggaaaaatc gccgtggaat ttcactaaaa tccgcatcaa agccaccaaa
     5761 tacctgctga ttttccttgt ctgcgcgtgg acgggcatca cgtttgcagg ctggtttgtc
     5821 cctatccgcc agttcgttcc cgatttattc actggagcag caggtggcgg cgcgatgttt
     5881 gccgcagcgt tttatggctt tatgaccttc ttcttcgccc acattatgcg tgaaaaagta
     5941 tgcctgcata tgtgtccgta tgcacgtttc caaagcgcga tgttcgacaa ggacacgctg
     6001 attgtttctt atgacgcgga acgcggcgaa ccgcgcggcg cgcgcaagaa aacggtcaat
     6061 aaggaagagg cgggtttggg cgactgcatc aactgtgcga tgtgcgtcca agtctgcccc
     6121 gtcggcatcg acatccgcaa cggtctgcaa taccaatgta tcggctgcgc cgcctgtatc
     6181 gacgcgtgcg atgagattat ggacaaaatg ggctatccgc gcggattaat ccgttatacg
     6241 accgaaagcg cgctggaaca cgaatattct gaaaaagaca ttaaaaaacg gctgctcaga
     6301 ccgcgcgtgg caggttacgg cgcggtgttg gcgttagtta tcattgcctt cctggccggt
     6361 ttgtccacgc gcaaaatggt cgaggtcgat attttgaaag accgtggcgt actggtgcgc
     6421 gaaaacgcca aaggctggct ggaaaacgca tacagcctgc gtatcatcaa caaaagtgaa
     6481 aaagaacagc tcattaccgc aagtgtcaaa ggctttgacg aaatcgccct gaccgggctg
     6541 cccgaaggcg gtatcaaggt tgccccgcgc gaaacggtaa cccttcccgt ccaagtgtcc
     6601 accattccgg aatacgcgga caaaggcagc caccctatcg aatttacctt ccaataccgc
     6661 gaaagcggcg cgcccgacgg caagccggtc gtcttggaag aagatgcaac ctttatcgga
     6721 gaataaccgt gtctcaaaac actccaatca aaccttggta caaacacgtc tggccgtgga
     6781 tcttgatggc ggggccgatt tttgtcgtca tcgccagcgt cgctatgttt tttgtcgcgc
     6841 agcagcacgc gacagatttg gttacggacg attattataa agacggcaaa catatcgaca
     6901 tccagcttca tcgggatgaa gaagccgtca gacggcatat cggggtgcag gttctcattt
     6961 cccccgatat gaatgcggca aaagtgtttg tcggcggcga gtttgacggc aaacagcctt
     7021 tgaacctgct gctgatgcac ccgacccgca aggcggacga tcaaaccgtc gccctcaagc
     7081 ccgtcggcag cgcgcagaac ggcagggcgg aatatgaggc ggtgttcaaa accctttcgc
     7141 cgaccaacca ctggtatgtg cgcgtggagg acgcggcagg cgtgtggcgc gtcgagaaca
     7201 aatggattac cagccaaggc aatgcggtgg atctgacccc gatggataaa cttttcaata
     7261 atgccggaag caaataaaaa agccgtgttt tcattgcatt ggtttgccag atgcaatgtc
     7321 gggcaggcat tgtttgatta ttcggcgtga tggtctgatt tatcggacga aaataaatgt
     7381 atcttatccc gtttattttt taacaccatt ccgaaatgca gcctgaaaaa tgccgtctga
     7441 agggcttcag acggcatttg tgttgtatgc ccgacacaat gcggaaggcg ttttgtttac
     7501 ataaaaacgt ttttatttct ctccgttttt tcgacactat tccgaaacgc agcctgaaaa
     7561 atgccgtctg aaaggcttca gacggcattt tgtttgcaaa tcaaatccta cctgatgtca
     7621 gcgtccgagc gttgcaacag gttcgctccc cgtcagcaga tattgtatcg tctcgcggac
     7681 ggtgcggatg gcattgccga agggcagcgg gtctttacct ctgaagaaca ggcctttatc
     7741 tacttctcca cggaatgcgg cggcaagctg gatatcaatg cagaattgtc cggctttgga
     7801 aagcccgtcg cgcagaccgc aactggtcag gcagtttaaa ccttgggtac agcggcgcgg
     7861 gtcagctttg gcgtttgcct gaagtttgct ttcacgcttg atgtagctgt ctaggaattt
     7921 ggtgcggaca ccgcgcgccg gcaaaccggc aacagacata aattcaacta ctttttcagt
     7981 ttccgcaccg gcgagcgttt ttttgaagtt aaggtgtgca tctccttctt cggtaacggc
     8041 aaaagccgta ccgatttgaa cggcggatgc tccccagttc tttagggcgg ttttgacttt
     8101 ttcaaaattt gccatgcctc ccgcaagaat aagcgggatt ttttcgcttt ccagccctaa
     8161 acttttgaaa acttcaaacg tttcctcaat cacgcgtttg aagtcgaact tggcatcgtt
     8221 tacgccttca acggttgatg cacccaaatg tccggccgcg tgggcaggat gttcgactac
     8281 aatcgcatcg ggcaatatgc cttttttcat ccaacgtttc aagacgatat taataccgcg
     8341 cgattcggac agaatcggca gcagcgcgac atctttatga tagccctcgg tcatttccgg
     8401 caggtctaaa ggcaggccgg cacccattac aaccgcatcc gcccctgatt cgcaagcctg
     8461 gcggacatac gcggcgtggt ctttgaccgc cttcatcacg ttgaccgcaa tcagtccttt
     8521 tccctctgaa gcgcttttgg ctttttggat ttccctgtct aatgcggtac agttcaaaga
     8581 tgtatatttc tcttcactcg gattgatttg tgattcggcg agtaggtctt cgtgaaggtg
     8641 gcgcaaatcc acactggcaa tcgttccgat accgttttca cgtgccaccg cgctggataa
     8701 acccgatgcg gaaacaccga cccccatacc gccttgcacg atgggggtaa gggattttcc
     8761 acgaataacc aaagggtcaa aaatattttg catcagtttc tccgagtata cgaatcagtc
     8821 aggctcatga aaaatggttc taactgtttt agaactattg ctcaaatttg gtattatact
     8881 ctaaatatcg cggcggtaaa caagaaagca gccggagctt cgggcatatt ctgttacgcc
     8941 tgtttcaatc gggagagaaa atattatagt g
//
LOCUS       DAWKOX010000076         8920 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.076, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000076 DAWKOX010000000
VERSION     DAWKOX010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8920
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.076"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WJK78_001219"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WJK78_001219"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ7598150.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAPAAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAK
                     SRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAATTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1968..3551)
                     /gene="aceF"
                     /locus_tag="WJK78_001220"
     CDS             complement(1968..3551)
                     /gene="aceF"
                     /locus_tag="WJK78_001220"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ7598151.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAASAAAAPVAAGGATVQV
                     AVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAVFLKVG
                     DKVSEGSAIIEVETVGSAAAAPAQAAQAAAPAAAPPPTAAAAPAAAPAPSAPAAAKID
                     EAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGAAKPAA
                     AGASLGSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEAD
                     MTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFN
                     IGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACFTISSL
                     GGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAG
                     MRFTVFLAKLLKDFRRITL"
     gene            complement(3701..6364)
                     /gene="aceE"
                     /locus_tag="WJK78_001221"
     CDS             complement(3701..6364)
                     /gene="aceE"
                     /locus_tag="WJK78_001221"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ7598152.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSDFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVVT
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALSA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7058..8770
                     /locus_tag="WJK78_001222"
     CDS             7058..8770
                     /locus_tag="WJK78_001222"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ7598153.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDSYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVRSPLTMASPAAIVEQFGANGG
                     SLGPVGFAGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     LLNG"
     gene            8833..>8920
                     /locus_tag="WJK78_001223"
     CDS             8833..>8920
                     /locus_tag="WJK78_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isomerase/hydrolase"
                     /protein_id="HEZ7598154.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEE"
BASE COUNT         1940 a         2289 c         2465 g         2226 t
ORIGIN      
        1 tcggagaaga tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgccgc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatca aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacggcc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggatgctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcagca gcaacgtggc
      541 cttcgtgaac ggctttgtgt gccaacattg gttgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac attggtacgc atttgtttgt ccacttcgat gaagccgcga tcggtaacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtaacgttgc ggctctttag gcgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttca ccaagtcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgaggccgat aatgccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggttacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagtgg
     1141 ctgcctgttc gtacgcgtcg ccggcagtca gcgacacttc caagtggtgc gggtctaaga
     1201 attgcccgtc gccttggata acgtccactt tacggctttt cgccatacct gccaaaccgc
     1261 ccgtgaggcg ggaaactacg ccgtctttgt aggcgcgaag catatcgatg tcgagttccg
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacaa ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaagttt
     1441 tgtaacgttc gacgatggcg actttcaagc cttcatcggc agcggcaaat gcagcggagt
     1501 aaccgccggg accgccaccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagca ggagcagcag ctttaggggc ttcttgcgcc ggggcggcag
     1621 caggtgcttc agctttggga gcggctgccg tgccttcagc ttcaacgacg acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccagggt aatcagggta tcgtcaacgg
     1801 cgatggtgtc tcctacgttc acttcaactg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaagctca tgtctcatct ttctgaatga tgttcaaact
     1921 tccttttcag acggcacagg ccgctatgcc gtctgaagcc gatcgggtta cagggtaatg
     1981 cggcggaagt ctttcaacag cttcgccaag aatacggtaa agcgcatacc ggccgcaccg
     2041 tcgatgacgc ggtggtcgaa agacaggctc aacgggcaca tcaggcgtgg ggcaaattct
     2101 ttgccgttcc aaaccggttt gatttgggat ttgcacacgc ccaagatggc gacttcggga
     2161 gcgttcacaa tcggcgtgaa acctgtgccg ccgataccgc ccaagctgga aatggtaaag
     2221 cacgcgcctt gcatttcttg cggtttgagc ttgccttcgc gggctttttt agacaattcg
     2281 gtcagctctt ggctgatttg tttcaagcct ttttgatcca cgtctttgat gacgggaaca
     2341 accaagccgt tcggcgtatc ggctgcgaaa ccgatgttga agtagttttt cagcaccagg
     2401 ttgtcgccgt ccagagaagc gttgaattcg gggaaggctt tcagcgcgga aacggaggct
     2461 ttgatgatga acgctagagg agacagtttc acgccttcgc gttcccattc tttgttcagt
     2521 tgtttgcgga attcttccag ctcggtcata tctgcttctt cgtgtacggt aacgtgggga
     2581 atcaccaccc agttgcgaga caggttttga ccggagattt tcttaatgcg ggacaattct
     2641 ttaacttcga cattgccgaa tttggagaag tccactttag gccacggcag caagtccaga
     2701 ccgctgccca aagatgcgcc ggctgcggca ggttttgccg cgccaccctg cattacggat
     2761 ttcacaaagg ctttgatgtc gtcgcccacg atgcggcctt tcaagccggt acctttgact
     2821 tggcccaaat ccacgcccaa ttcgcgcgcc agtttgcgtg cggaaggacc ggcgtgtgct
     2881 ttggcgaaag cggcctcgtc gattttggca gcggcaggtg cagaaggtgc aggcgcggcg
     2941 gcgggtgcgg cggcagcagt cggaggcgga gcggcagccg gtgcggcagc ttgagcggct
     3001 tgagcagggg ctgctgcggc agagccgacg gtttctactt cgataatggc agagccttcg
     3061 gacactttgt cgccgacttt taagaatacg gctttaacga caccggcagc ggtacaaggt
     3121 acgtccattg tcgctttatc ggtttccaaa gtaatcagcg tgtcgtcttc ggcaacggtg
     3181 tcgcccactt tgatttcaac ggcgattaca tccacatcgg tatggccgcc gatatcggga
     3241 acggctactt gaacggttgc accgcctgcg gcaacgggtg cggcagcagc cgaggcggct
     3301 tcggcagcgg cggcaccggt ttcaacggtc aaaattacgc cgccttcgga gattttgtcg
     3361 ccgactttga cttttacttc tttcacgaca ccggcagcat cggcaggcac atccatcgtg
     3421 gctttgtcgg tttccagtgt aatcagggtg tcgtcaacgg cgatggtgtc gcccgcttta
     3481 acttctacgg cgatgatgtc gacgttttcg tgaccgccga tatcggggac tttgatttct
     3541 acgatactca tttgagttcc tttaatcttg ttcagttgga tgccgtctga aagctgcttc
     3601 aggcggcatc ggtacggttt gtctgctcaa accattcggg cattcggttt tcagacggcc
     3661 tgatgtcgga atggggcaaa cagaccgtct gaaacatcaa tcagcgtttc cagctaggag
     3721 ctgaatcggc tttgatgccg tatttctcaa tggcttgttg aacggtttct ttgctgactt
     3781 tgccttgttc cgccaatgcg ctcaatgctg ccacggcaac gttgtagcga tccacttcaa
     3841 agaagcggcg caggttggcg cggctgtcgg agcggccgaa gccgtcagta cccaagacgt
     3901 ggtagtcgtt cgggatgtag gcgcggatac ggtcagcata gctgcggata tagtcggtag
     3961 cggcaataac cggaccgtca tgaccttgca atttggaagt aacgaaaggt actttttcgg
     4021 cttccagcgg atgcaggcgg ttgaagcgtt ctacctcgac agcgtcgcgg tgcagcaggt
     4081 tgaaggatgg gcaagaccaa atgtctgctt ccacgccgaa gtcggctttc agcagctcgg
     4141 caccggtaac cacttcttgc aaaatcgtac cggaacccat cagttggact ttcttgtcgc
     4201 ctttgccgcc ggctttcagc aggtacatac ctttcaagat gtcttgttcc gcaccttcgg
     4261 gcatatccgg atgggtgtag ttctcgttca tcagggtgat gtagtagaac acgtcttcat
     4321 tattggcata catacggcgc agaccgtctt gtacgatgac ggcgacttcg tattggaaag
     4381 tcgggtcata agatacgcag ttcggaatca ggtcggcctg gatgtggctg tggccgtctt
     4441 cgtgttgcag gccttcgccg ttcagcgtcg tacggccggc agtaccgccc agcaggaagc
     4501 cgcgcgcgtg catatcgccc gccgcccaag ccaagtcgcc gatacgttgg aaaccgaaca
     4561 tagaatagta aatgtagaac ggaatcatcg cgaagtcgct gttggcgtag ctggttgcag
     4621 ccgcaatcca gtcggccatc gcgcccggtt cgttaatacc ttcttgcaag atttgaccgt
     4681 caacggattc tttatagaac atcagttggt ctttgtcttg aggggtatat tgctgacctt
     4741 tcggattcca aataccgtat tggcggaaca taccttccat gccgaaagta cggctttcgt
     4801 cgggaacgat aggtacgacg cgtttgccga tttttttgtc tttcagcaaa gtggacagga
     4861 tgcggacgaa tgccatcgtg gtcgagaact cgcgttcacc gctggatttg agttgtgcgt
     4921 cgaatgctga cagctcgggc acttccaata cttcctgcgt cggtttgcgt tgcggcaggt
     4981 agccgcccaa agcatcgcgg cgtgcgtgca ggtatttgta ttcttccgta tcgggggcaa
     5041 aagtcaggta aggcagatcg ccgctttcga tttgttcgtc ggtaaccgga atgtcaaagc
     5101 ggtcgcggaa ttgtttcagg gacgctttgt ccattttttt ggcttggtgg gcaacgttct
     5161 gaccttcgcc ggatgcgccc ataccgtaac ctttaatggt tttcgccaag atgacggtag
     5221 gtttgccgtc ggcatggttc gctgcgcggt cgtaggcgtt gtacactttt tgcgggtcgt
     5281 ggccgccgcg gttcaatgcc cagagttgct catcggtcat atcggcaacc aatgctttca
     5341 gttcgggcgt attgaagaag tgttcgcgca catacgcgcc gtctttggat ttgtaagttt
     5401 ggtagtcgcc gtccaaacat tcttccatac gttggcgcag gataccgtct ttgtctttcg
     5461 ccaagaggcg gtcccagcgg cggccccaaa tgactttgac gacattccag ccggcgccgg
     5521 caaagttgcc ttccaattct tggatgattt tgccgttgcc gcgtaccgga ccgtccaagc
     5581 gttgcagatt gcagttgatg acgaaaatca ggttgtccaa gccttcgcgt gcagccagtg
     5641 cgattgcacc ttgagattcg ggttcgtcca tttcgccgtc gccgcagaaa caccatactt
     5701 tacggccttt ggtttttgcc aaaccacgcg attccaagta tttcaggaaa cgcgcctgat
     5761 aaatcgccat gatgggcccc aagcccatgg atacggtcgg gaactgccaa aagtcgggca
     5821 agaggtgggg gtgcggatag gaaggcagac cgtgtccgtc cacttcttgg cggaagttgt
     5881 tcagctggtc ttcggtcaga cggccctcga cgaatgcgcg tgcatagatg cccggggcga
     5941 cgtgaccttg gaagaagacc aaatcgcctt cttcgccttc gcctttggct ttccaaaagt
     6001 ggttgaaacc gacttcgtac atggtggcgg cagattggaa agatgcgatg tgcccaccca
     6061 gttccaaatc tttcttgccg gcgcgcaata cgatggcggc ggcgttccag cgcacgaatg
     6121 cgcggatgcg gtgttcgatg ttttggtcgc ccggaatgcc tttttcgttt tcaaccgaaa
     6181 cggtattcaa atacggtgtg gtcgtgccgt gtggcatacg tacgcccttg tcgcggcagt
     6241 atttgaccag gttttccaag aggtattgcg cgcgttcgcc gccttcatat tcgaggacgg
     6301 agcttaacgc gtccagccac tcttgggttt cgatagggtc aacatcgtgt aattgggtgg
     6361 acatagtatc tatcctttat gttgagtgtt taatcggcag ggagggtgta gccaacccct
     6421 ttattttcgt ttgtgaaaaa taataagcaa aaacgaaaat ttctaaatca aaccgaaaaa
     6481 aataatttaa gtttaatgtt ttcaaaaaat tataaaagtt ttggaaacaa gggaaaactt
     6541 gaaaaaaatg ttcgatctgc tccacacgaa atcctatcag caatcgggtc tgctggcaaa
     6601 taaccatgcc tgtaaaagca ggttttatac tgaagttggc gtttggtaag gtcaagtctt
     6661 tttgatttcg aaatattctg tttgattttg gcgatatttt ttcggaattg tggtatatcg
     6721 aatcattatg tctctgtcgg caattttcct attgtagaaa atctatacac aagctttgtg
     6781 gataaccgtg ttgataagcc acggcttgtg ttaaaaaagt cttacgcaac aaatgtacgc
     6841 ttattttgat taaaaaatag gcacatttaa atctataaaa atcatgtgct tatgttcaat
     6901 atgatgtttc tggtcatgtt tttgccgtct gttatgggat ttctcccgcg cttggggcag
     6961 ggggtgaatt ttggaggttg gtgcaaaacc tgcttttttc gcgttacaat ctgcacccga
     7021 tttacttttg aatttgcctg tttggaaaaa tacttttatg aaagccagcc aattctttat
     7081 ctctacttta aaagaagccc ctgccgaagc cgcgcttgcc agccacaagc tgatgattcg
     7141 cgccggtctg attaaagcca acgcgtccgg cctttatact tggatgccga tggggctgcg
     7201 cgtgttacgc aaagtcgaaa acgtcgtgcg cgaggaaatg gcgcgcgcgg gcagcgtgga
     7261 gctgctgatg ccggtggtgc agcctgccga gctgtggcag gaatccggcc gctgggaatt
     7321 ttacggtaaa gaactgctgc gcctgaaaga ccgccacgac cgcgatttct gcatgggccc
     7381 gacctgcgag gaagtcatcg ccgacatcgt gcgcaaagaa atcaacagct acaaacagct
     7441 gccgaaaaac ttttaccaca tccaaaccaa attccgcgac gaagtgcgcc cgcgtttcgg
     7501 cgtgatgcgc gcgcgcgagt tcgtcatgaa agacgcttat tccttccatg ccgactacgc
     7561 ctcgcttcag acgacctatg atgccatgta tgactcttac tgccgcatct tcacccgtct
     7621 gggcttggca ttccgccccg tcgccgcaga caccggcagc atcggcggta cgggttcgca
     7681 cgagtttcaa gtgttggcgg aaagcggcga agatgttatt gcgtacagcg acacttccga
     7741 ttacgccgcc aatatcgagt tggcaccgac cttgccgctt aaaggcgaac gcgccgctgc
     7801 tcaggctgtg ttgaccaaag tacatacacc aaacgtcaaa accattgagt ctttggttga
     7861 attcctgaat attccggttg aacaaaccct caaatccatc gtggtcgaag gcgaaaacga
     7921 aggcgaaatc gtcttattac tgttgcgcgg cgaccatgag ttcaacgaca tcaaggcaga
     7981 aaaactcgca ggcgtgagat cgccattgac gatggcaagt cctgccgcga ttgtcgaaca
     8041 gttcggcgca aacggcggct cgctgggtcc ggtcggcttt gcaggtaaag tttatgccga
     8101 tttcgccact gaaaaaggcg cggactgggt catcggtgcg aacgaagacg gctaccacta
     8161 taccggcttc aacttcgggc gcgatgccgc cgagcctgaa ttcgtcgatt tgcgtaatgt
     8221 ggtcgaaggc gacgaaagcc ccgacgggca aggccgtctg aaactggcgc gcggcattga
     8281 agtcggacac gtcttccagt tgcgcgacaa atacacccaa gccatgaacg taagcttcct
     8341 tgacaacaac ggcaaatcgc aaattatgga aatgggctgc tacggcatcg gcatcacccg
     8401 cgtcgttgcc gccgccatcg agcagaataa cgacgaaaaa ggcatcatct ggaccaaagc
     8461 aatggcgccg tttgaagtcg ttatcgtgcc gatgaactac aaaaaatcag acaccgtacg
     8521 cgaagccgcc gacaaaatct atgccgaatt gctggcggca ggcgcggatg tgctgctgga
     8581 tgaccgcgac gaacgcgcag gcgtattgct gaacgattcc gagctgttgg gtattccgca
     8641 ccgcatcgtc atcggcgacc gcgctttgaa agaaggcaat gtcgaatacg ccgaacgccg
     8701 caacaacgaa gcgcaggcag ttgcaatcgg agaaattgtt gcgcgtgtaa cagctttatt
     8761 aaatgggtaa gcttggtcaa atgccgtctg aaaataattt cagacggcat ttttatttgg
     8821 ggagaaagtg aagtggcttc agtattttta gaaggagaag cagtcgaggt cggcaatatt
     8881 ttctgtatcg gcaggaacta tgccgcacat attgaagagt
//
LOCUS       DAWKOX010000077         8871 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.077, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000077 DAWKOX010000000
VERSION     DAWKOX010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8871
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.077"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..132)
                     /locus_tag="WJK78_001224"
     CDS             complement(<1..132)
                     /locus_tag="WJK78_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEZ7598155.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     "
     gene            371..1270
                     /gene="crgA"
                     /locus_tag="WJK78_001225"
     CDS             371..1270
                     /gene="crgA"
                     /locus_tag="WJK78_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ7598156.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLATKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1499..4714)
                     /gene="carB"
                     /locus_tag="WJK78_001226"
     CDS             complement(1499..4714)
                     /gene="carB"
                     /locus_tag="WJK78_001226"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ7598157.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAMNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGILSDLDFAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECEARPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(4754..5365)
                     /locus_tag="WJK78_001227"
     CDS             complement(4754..5365)
                     /locus_tag="WJK78_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598158.1"
                     /translation="MINIIATWAMALTYIFLLLFIIVFIPIQLYLENIKKKKFKSRII
                     DILKNNHNNLDLNDIKQMTEAVNLNNFAARKIIKQLYYTDELNLNLVRQLQKEIQQEE
                     PFDGCSDELKPTLIGINELLETHGSESQKHLLTPIISELKELNQIKHDHKKMKTQSYI
                     AYIIAIISFFIGSISFYYTITAPSGKEIANTVVEQLKANQNQQ"
     gene            complement(6213..6602)
                     /locus_tag="WJK78_001228"
     CDS             complement(6213..6602)
                     /locus_tag="WJK78_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ7598159.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSEAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7175..7300)
                     /locus_tag="WJK78_001229"
                     /pseudo
     CDS             complement(7175..7300)
                     /locus_tag="WJK78_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687282.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7346..8479)
                     /gene="carA"
                     /locus_tag="WJK78_001230"
     CDS             complement(7346..8479)
                     /gene="carA"
                     /locus_tag="WJK78_001230"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ7598160.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATIEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAEDVLALNPDGVFLSNGPGDPEPCTYAIKAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         1955 a         2241 c         2351 g         2324 t
ORIGIN      
        1 atcaatcacg gtttcttgaa cattgtgtcc gagcgcggtc aaaacttctt tcgctttttt
       61 gtgaagcgtg cggtttaacc cgccgtgaga atgtccgaac gctttgccgc cgtctaataa
      121 taaaatattc atttgttacc tcgtttgtga attgatgaat gtattgtgcc gttttacttt
      181 ataatttaaa agtgcaaaaa taagaaaaca cttttgcgtc aaatgaaata atcagatgtt
      241 ccaacacacg ggatggcaca taaagcaccg ccctgtgtgc cgtcctgatt cggaaggggt
      301 tacacccctc ccaaataaag tctgatcctg ccgccctaaa gggcggggtt ccaaccgaaa
      361 aggaaacacg atgaaaacca attcagaaga actgaccgta tttgttcaag tggtggaaag
      421 cggcagcttc agccgtgcgg cggagcagtt ggcgatggca aattctgccg taagccgcat
      481 cgtcaaacgg ctggaggaaa agttgggtgt gaacctgctc aaccgcacca cgcggcaact
      541 cagtctgacg gaagaaggcg cgcaatattt ccgccgcgcg cagagaatcc tgcaagaaat
      601 ggcagcggcg gaaaccgaaa tgctggcagt gcacgaaata ccgcaaggcg tgttgcgcgt
      661 ggattccgcg atgccgatgg tgctgcatct gctggcgccg ctggcaacaa aattcaacga
      721 acgctatccg catatccgac tttcgctcgt ttcttccgaa ggctatatca atctgattga
      781 acgcaaagtc gatattgcct tacgggccgg agaattggac gattccgggc tgcgtgcacg
      841 ccatctgttt gacagccgct tccgcgtaat cgccagtcct gaatacctgg caaaacacgg
      901 cacgccgcaa tctacagaag agcttgccgg ccaccaatgt ttaggcttca ccgaacccgg
      961 ttctctaaat acatgggcgg ttttagatgc gcagggaaat ccctataaga tttcaccgca
     1021 ctttaccgcc agcagcggtg aaatcttacg ctcgttgtgc ctttcaggtt gcggtattgc
     1081 ttgcttatca gattttttgg ttgacaacga catcgctgaa ggaaagttaa ttcccctgct
     1141 cgccgaacaa acctccgata aaacacaccc ctttaatgct gtttattaca gcgataaagc
     1201 cgtcaatctc cgcttacgcg tatttttgga ttttttagtg gaggaactgg gaaacaatct
     1261 ctgtggataa ttctataaaa acctgccata aaattgtttt tactcactta ataactttga
     1321 gaaaaaataa ataagatgat gtatagccgc ggcaatggca gtctatatgg ggagcgtgat
     1381 agggctgttc cttatgtacg gcttgtgtgt ggcaacatcg gctttccaaa tgacaaaatg
     1441 ccgtctgaaa ccgtaaaaaa aaaaggtttc agacggcatt ttcaacctga ttcaggcatc
     1501 agttgcggtt tttcaaacgc ccgtgcagtt cttgaacgct gtacacgccc aagtggtcgc
     1561 ggcttttcgc gccttcgctc atcgcttcgc cgccggcggt ggtggtgtat tgcggcacgc
     1621 gttgctgcaa tgcgctttgg cggatgatgt ggctgtcgga cacggattgc ggatcgctgg
     1681 aaacggtatt cacgaccagt gcgatttcac cgtttttcag cgcgtcgccg atgtgcgggc
     1741 ggccttcggg gactttattg atggtttgga caatcagccc gtgttcggtc aggtattgcg
     1801 ccgtgccgcg cgtggcgcag atgccgtagc ctaaggcttg gaagtttttg gcggttttaa
     1861 tgacgcgttc tttgtcttct tcgcgcacgg agaggaagat tttgccggtc gggttgaggc
     1921 gttcgcctgc gccgagttgg gctttgtagt aggcttcgcc gaagcttgcg cccacgccca
     1981 tgacttcgcc ggtggagcgc atttccggac ccaaaatcgt atccacgccc gggaatttga
     2041 tgaaggggaa cacggcttct ttaacggcat agaaatcagg gacgacttct ttttccacgc
     2101 cttgttcttt cagggaaatg cctgccatac agcgtgcgcc gactttggcg agcggcacgc
     2161 cggtggcttt ggagacgaag gggacggtgc ggctggcgcg cgggttcact tccaatacga
     2221 acactacgcc gtcctgcacg gcaaactgca cgttcatcag tccgaccacg cccagcgcgt
     2281 acgccatcgc tttggtttgg cggcggattt cgtcttggat ttcttcgctt aaggagtagg
     2341 gcggcagcga gcagccggag tcgccggagt ggatgcccgc ctgttcgacg tgctgcatga
     2401 tgccgccgat aaccacatct ttgccgtctg aaacgcagtc cacatcgact tcaatcgcgt
     2461 tgttcaggaa gaagtcgagc aacacggggc tgtcttcgga aacctgcacg gcttcgcgca
     2521 tatatttttg caactgctcg gcagagtgga caatctgcat cgcgcgtccg cccaaaacat
     2581 aagacgggcg cacgaccagc ggataaccga tttcttcggc tttgacgagt gcttcttctt
     2641 cgttgtgggc gatgcggttg ggcggctggc gcaggcctaa gtcgttcaac actttttgga
     2701 agcgttcgcg gtcttcggcg gcatcgatgc tgtcggcgga cgtgccgatg atgttcacgc
     2761 cgttttcaac cagcgcgttg gcgagtttga gcggggtttg accgccgtaa tgcacaatca
     2821 cgccccacgg gttttcggtg cggacgattt ccaacacgtc ttccaatgtc agcggctcga
     2881 aatagaggcg gtcgctggtg tcgaagtcgg tggacacggt ttctgggttg cagttgacca
     2941 taatcgtttc aaaaccggat tcgcgcaggg cgagcgcggc gtgaacgcag cagtagtcaa
     3001 actcgatgcc ctgaccgatg cggttcgggc cgccgccgag aatcatcact tttttgcggt
     3061 cggaaggacg cgcttcgcat tcctcttcgt aagtggaata gaggtaggcg gtttcggtgg
     3121 cgaactcggc ggcacaggtg tcgacgcgtt tgtaaaccgg atgcagcttc agcgcgtagc
     3181 ggtgttcgcg aacttctttt tcgcttacgt tcaacaattg tgccaaacgt ttgtcggaga
     3241 agcctttgcg tttcagacgg cgtagggcgg cgaaatccaa atcactcaaa atgccgtctg
     3301 aaaccgcttt ttcttccttc atcaagtctt cgatttgcgc caggaaccaa gggtcgatgg
     3361 cgcagatttc gtggatttct tccagcgtga agccggcgcg gaacgcgtct gccacaaaca
     3421 gcatacgctc agggccgggg ttcgccagtt cgcggcggat ttccgctttg tcggagcttc
     3481 tcggattgaa gccgcacaag ccggtttcca agccgcgcaa ggctttttgg aagctttcct
     3541 gaatcgtgcg gcccatcgcc atcacttcac ccaccgattt catctgtgtg gtcaggcggt
     3601 cgtctgcggc agggaatttt tcaaacgcga aacgcgggat tttggttacg acatagtcga
     3661 tggacggctc gaacgacgcg ggggttttgc cgccggtgat gtcgttgcgc aactcgtcca
     3721 gcgtaaagcc gaccgccagc ttggccgcca ccttcgcaat cgggaagccc gtcgctttgg
     3781 aagccagcgc ggacgaacgg ctcacgcgcg ggttcatctc aatcacaatc atctcgccgt
     3841 tttcagggtt catcgcaaac tgcacgtttg agccgcccgt gtccacgccg atttcgcgca
     3901 ataccgccaa cgaagcgttg cgcatgattt ggtattcctt gtccgtcagc gtttgcgccg
     3961 gcgcgaccgt aatcgagtcg cccgtatgca cgcccatcgg gtcgaagttt tcaatcgagc
     4021 agatgatgat gcagttgtcg ttcttgtcgc gcactacttc catctcgtac tctttccagc
     4081 cgagaacgga ctgctcaatc agcagctcgt gcgtgggcga ggcatcgaaa ccgcgttcgc
     4141 aaatcgccaa aaactcgtct ttattgtagg caatgccgcc gcccgaaccg cccatcgtga
     4201 aagaaggacg aatcagggta gggaagccga cctgttcctg cgccgccaaa gcttcgttca
     4261 ttgtgtggca gacaaaagat ttcgggcaag acaaaccgat tttttccatc gcctctttaa
     4321 agcggccgcg gtcttctgct ttgtcgatgg cgtcttccgt cgcgccgatt aattcaacat
     4381 tgtatttcgc cagcacgccg ttgcgcgcca aatccagcgc acagttcagc gcagtttgac
     4441 cgcccatggt aggcagaatc gcatcgggcc gctctttggc aataattttt tccaccgtct
     4501 gccacataat cggctcgatg taggtaacat ccgccatttc ggggtcggtc ataatcgtgg
     4561 cggggttgga attcaccaaa atgactttat agccttcttc acgcaaggct ttgcaggcct
     4621 gtgcgcccga atagtcaaat tcgcaggcct gaccgataac gatagggccg gcgccgatga
     4681 taaggatgga ttttaggtcg gtacgtttgg gcatgatggg tctttctatg aaatcaaatg
     4741 tttagctaaa aatttattgc tgattttgat tggcttttaa ttgctctacg acagtattgg
     4801 caatctcttt tcctgatggg gctgtaattg tgtaataaaa gctaatactg cctatgaaga
     4861 aactgataat ggctatgata taggctatat aactttgtgt tttcattttt ttgtgatcat
     4921 gtttgatctg atttaattct tttaattcag aaataattgg agttaataaa tgtttttgac
     4981 tttcagatcc atgcgtttcc aaaagttcat ttattcctat tagtgttggt tttagttcgt
     5041 ctgagcagcc atcaaaaggt tcttcttgtt ggatttcctt ttgtaactgt ctaactaaat
     5101 ttaaatttaa ttcatcagtg taatatagtt gcttaataat ttttctggca gcaaaattat
     5161 taaggtttac tgcttctgtc atttgtttta tatcattaag atctaggtta ttgtgattat
     5221 tttttaatat atcaattatt ctagatttaa atttcttttt ctttatattc tctaaatata
     5281 gctgaattgg aataaaaaca attataaaga gcaaaagaaa tatatatgtt agtgccatag
     5341 cccatgtggc aattatattt atcatttatc aatatcttcc atttggttta tatattgtct
     5401 cataataagc aagccgtagc tcgcatgcag ggtgtgtgcg gtacgcacgc gttctccatt
     5461 ttccctgcaa ccccaaccca ccgtgtgcgt gccttgcggc acacacccta ccgatgggtt
     5521 caaaggtcgt ctgaaaaaac gctcgcggcg tttgttccat ctgccttgcg ataaaggctg
     5581 cctgaaaaat tcccgctgtt gatatttcgg gcattctttc tcaaaccgcc tgcaaccgca
     5641 aaatccgctg caacctgccc cctcccccgt gggggagggt tggggagagg gcattccccg
     5701 aatttcggca acctttccca acaactcaac caccgaaata caagccttgt ggcttgttgc
     5761 cctctctcta gctctctccc acgggagaga ggacggagtg gctgtagggc taagggttct
     5821 gcaaggaaac aggttgtgca ggttgctttt tgcttttcag acgacctgaa atcaacggta
     5881 aatccaagtc gcttttcaaa ccgcctgcaa ccgcaaaatc tgctgaaacc tactccctcc
     5941 cccgtggggg agggctgggg agagggcatt ctccgaattt cggcaacctt tcctaacact
     6001 ctaaccgcca agacacaagc cttgcggctt gttgccctct ctctagctct ctcccacggg
     6061 agagaggatg gggtggctgt tggggctaag gtttctgtaa actaatcagg ttatgcaggc
     6121 tgctttttgt ttttcagacg gcctttataa atgctcaatt cagtcggctt tatcctatta
     6181 ttttcaataa tccaatcaaa atcagccatc tgctatcgtg cagcttgctt ttccaattct
     6241 tgcaacacga gcaggatttc tgtcagcaca tcgtttgtct gctgtaaaat ctcgtgattc
     6301 caaaaccgca gtacggtaaa gcccaagctg ttgagatatg ccgtccgcgc gtggtcgtat
     6361 gcggcttgtt ctgtgtgctg ccctccgtct gcttcgacaa tcaacttggg cgttacgcac
     6421 ataaaatcaa caatatagtt tcccatcggc tgctggcggc ggaatttata gccgttcaga
     6481 cggcctgccc gcaggtgctg ccacaatttt gcttccgcct cgctcatttc ttggcgcatg
     6541 gctttggcgc gttggcgcaa gatggggttg tcggtggtca agagtttctc gtgcgggttc
     6601 attttgttgt cgtgctgttt gctgccctct ctctaactct ctcccacggg gagagaggac
     6661 ggggcggttg ttggggttaa aggggctgta aggaaaacaa gtcgttcagg ccacttttta
     6721 cttttcagac gacctgcaat caacggttgt aaatccaagt tgcttttcaa accgcctgta
     6781 accgcaaaac ttgctgcaac ctaccccctc ccccgtgggg gagggctggg gagagggcat
     6841 tctccgaatc gcggcaatct ttccctaatt ccctaactgc ctcaatacaa gcctttcggc
     6901 ttgttgccct ctctctaacg ctttcccacg ggagagagga cggtgcggct gtagtgatta
     6961 agggttttgc aaggaaaaca aggaaaacaa gttgtacagg ctgtttttta tttttcaagc
     7021 gacctgaaat caacgcttgt aaatccaagt cgcttttcaa actgcctgca accgcaaaat
     7081 ctgctgcaac ctaccccctc ccccgtgggg gagggctggg gagagggcat tttccaagtt
     7141 gcggcaatct ttcccaaatc ccttagtctt ctaaaataca agccttacgg ttgttgccaa
     7201 atgaaacttc ttccataccc aaaacttgcg tgtaaaacgc aatggttcgg tcaatgtcgg
     7261 caacggtcag taccagatgg tcgagtgcgc taatcttcat ttcccgcttt ctttttcagg
     7321 cggcggcagt gccgtctgaa agccattatg cccgttttgc cgctttcata ttgccaatga
     7381 atttgtcaaa caaatagccg acatcttgcg gaccggggct ggcttcgggg tggccttgga
     7441 agcagaacac aggtttgtcg gtcagctcga tgccttgcaa agtgttgtca aacaaggatt
     7501 tgtgggtaat gcgtgcgtta gcgggcaggg tgtcggcatc aacggcaaaa ccgtggtttt
     7561 ggctggtgat gacgactttg ccgctgtcca aatcttgcac agggtggttc gcaccgtggt
     7621 ggctgaagcg cattttcagg gttttcgcgc cgatggcgag gctgatgagc tggtgtccca
     7681 agcaaatgcc gaaaatcggt ttgccgcttt ccatcagttt ttgtacggct ttgatggcgt
     7741 aggtgcaagg ctcggggtcg ccggggccgt tggataggaa tacgccgtca gggttgagtg
     7801 ccaacacgtc ttccgcgctc gtttgggcgg ggacgacggt caggcggcag ccgcgcgagg
     7861 cgagcatacg caggatgttg gttttcacgc cgaaatcgta ggcgacgacg tggtaaggct
     7921 gttcgtcagg ggtaacgaaa cccttgccca atgcccattc gccttccgtc cattcgtaag
     7981 tttccgtgca ggaaacttct tttgccaagt ctttgccgac catactgccg aacgcggcga
     8041 tgagttcttg cgctttttcg attgtggcat ccgcaccggt cagaatcgcg ccgccttgcg
     8101 cgcctttttc gcgcaacagc gtggtcaggc ggcgggtatc gatgtcggcg atggcgacgg
     8161 ttttgttgcg taccagatag tcgtgcaggc tttcggaggc gcggaagttg ctgtgcaaga
     8221 gcggcaggtc gcggataatc aggccggcgg cataaacgct gcggctttct tcatcttcgg
     8281 cgttggtgcc ggtgttgccg atgtgtgggt aggtgagggt aacgatttgt ttgcagtagg
     8341 acgggtcggt caggatttcc tgatagccag tcatcgaagt attgaacacg acttcgccgg
     8401 aagtcgaacc ttcgtaaccg attgatgtgc cgtggaatac gctgccgtca gcgaggacga
     8461 ggagggcggg ggtgctcatg atgggaatcc tgtttttaat aaaattcttg acaatgccgt
     8521 ctgaagggac ttcggcaggg ggcatccggt cggaaaaatc cggtcaaaaa aaaacacgcc
     8581 gcgcaagata gacgcgtaac gtgcttttcg ggcaagtgcc tataccctga aagcagcata
     8641 ttttaagacg aaacataccc gatttcaagc gcaaacgcgg caggcgggct gatatgttcg
     8701 cgcgaaaacg gaaatccgtg gcgtaaaacc gcccgctccg cgcccactat gcccgttacg
     8761 catttcccca cgtccgtccg gcgaaactat gggaataccc gaatcgtcag gaatacctga
     8821 atcgtcagga atacctgaat cgtcaggaat acctgaatcg tcaggaatac c
//
LOCUS       DAWKOX010000078         8757 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.078, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000078 DAWKOX010000000
VERSION     DAWKOX010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8757
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.078"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(268..1359)
                     /gene="ychF"
                     /locus_tag="WJK78_001231"
     CDS             complement(268..1359)
                     /gene="ychF"
                     /locus_tag="WJK78_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ7598161.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVSGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            complement(1472..3148)
                     /locus_tag="WJK78_001232"
     CDS             complement(1472..3148)
                     /locus_tag="WJK78_001232"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ7598162.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKANGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLDALEKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIESQTNNFGFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            3323..3754
                     /locus_tag="WJK78_001233"
     CDS             3323..3754
                     /locus_tag="WJK78_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ7598163.1"
                     /translation="MGSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGHNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            complement(3985..4680)
                     /locus_tag="WJK78_001234"
     CDS             complement(3985..4680)
                     /locus_tag="WJK78_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ7598164.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEEALGDGSAYGVNIAYSPEPEGGLETAGGIARALPLLGDAPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHHPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(4698..5198)
                     /gene="hpaC"
                     /locus_tag="WJK78_001235"
     CDS             complement(4698..5198)
                     /gene="hpaC"
                     /locus_tag="WJK78_001235"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ7598165.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTNLSPEERFAY
                     HIWHYGKTGQPEIEGALAHLHGHIVGQHEIGTHFVFYVRLDEIKNCVGKRPALLYFRR
                     QFRSLD"
     gene            complement(5313..5753)
                     /gene="nadR"
                     /locus_tag="WJK78_001236"
     CDS             complement(5313..5753)
                     /gene="nadR"
                     /locus_tag="WJK78_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ7598166.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            complement(6096..6605)
                     /locus_tag="WJK78_001237"
     CDS             complement(6096..6605)
                     /locus_tag="WJK78_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ7598167.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPEEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAILVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            complement(6684..6759)
                     /locus_tag="WJK78_001238"
     tRNA            complement(6684..6759)
                     /locus_tag="WJK78_001238"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6724..6726),aa:Lys,seq:ttt)
     gene            6970..8049
                     /gene="apbC"
                     /locus_tag="WJK78_001239"
     CDS             6970..8049
                     /gene="apbC"
                     /locus_tag="WJK78_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ7598168.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICTNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
BASE COUNT         2030 a         2510 c         2259 g         1958 t
ORIGIN      
        1 aagttaatcc actatactcg aaacgcggcg gcgcaaatgc cgtctgaaag gtcattttgt
       61 acgggatatt cggaatgccg gacggctttt tgcaacagcg gggcaggcgg tttgttttgc
      121 aggaatcggg gagggcaaat cggaaatgcg ggtgggattt tattttgatg cagccgcatt
      181 ccggcggtat ggaaacgccg aaaaccacca aaaccggctt cagacggcat ttctggcaaa
      241 gccgtctgaa aacctgccgc atttgggtta cacgttaaac aaaaagtgca tcacatcccc
      301 atcctgcacg acgtattctt tgccttccac acgcattttg ccggcttctt tggctttggc
      361 ttcgccgccg agcgagacaa agtcgtcgta agaaatgact tgggcgcgga tgaagccgcg
      421 ttcgaagtcg gtgtgaatca cgccggcggc ttgtggggct gtgtcgcctt tgtgtatcgt
      481 ccacgcgcgg acttctttga cgccggcagt gaagtaggtt tgcagcccca aaaggtcgta
      541 accggcgcgg atcaggcggt tcaggcccgg ttcttccaag cccatttcgg cgaggaactc
      601 ggctttttca ccgtcttcca actcggcgat ttcgctctcc atcgcggcgc acacggcgac
      661 gacgggggcg ttttcttttg ccgccaattc tttcaggcgg tcgaggtgcg ggttgttttc
      721 aaaaccgtct tcggaaacgt tgccgacgta catggcaggt ttggcggtca gcaggaacag
      781 cggtttgagc atcgcgcgtt cttccgcgtc caaaccgaag gaacgcacgg gtttgccttc
      841 gtccagatgc ggcagcagtt ttttgcacaa atcgaccagc ttttgcgcgt ctttgtcacc
      901 ggaacgggcg cgtttttctt cgcggacgat ggctttttcc acacttgcca agtcggcaag
      961 cgccaactct gtaccgatgg tttcgatgtc ggcaatcgga tcgactttgc cggaaacgtg
     1021 gacgatgttg tcgtcgtcaa agcagcgcac gacattcaca atcgcatcgg tttcgcggat
     1081 gttggcaagg aactggttgc ccaagccctc gcctttgctc gcgcctgcaa ccaaaccggc
     1141 aatatcgaca aattcgacga tggcaggctg cattttttgc ggattgacga tttttgccaa
     1201 ttcggccata cgcggatcgg ggacttcgac gatgccgacg ttgggttcga tggtacagaa
     1261 aggatagttt gccgcttcga tacccgattg ggtcagcgcg ttaaaaaggg tggatttgcc
     1321 gacgttgggc aaaccgacga tgccgcattt caaactcatg ttttttcctg aaaatagaga
     1381 aatttaacgg cggattatag cataccgccg cccgcgttcc gaaaaatgcc gtctgaaacg
     1441 gcttcagaca gcatccggtt tcaaaaaccg ttcagaacaa gccgtgaatc acgccgtgtt
     1501 cgtccacatc gattttctcg gcggccggaa ctttcggcag acccggcatc ttcatcatat
     1561 tgccgcacag cgcgacgatg aagcccgcgc cggcggaaac ggtgatgccg cgcacggcga
     1621 tgcggaagcc ttcggggcag cccaacagtt tggcgttgtc actcaaagag tattgggttt
     1681 tcgccatgca gatcggcatt ttgtccaagc ccagtttttc cagtgaagcg atttcggcag
     1741 acgcttccgc gctgaaatca acatcttccg cgccgtacac tttttgggca atcgcacgga
     1801 ttttgtcttt gatgcccaac tcgacatcgt aggcgaaacc gaagttattg gtttgacttt
     1861 caatggcgtt gacgactttg cgcgccaaat ccgcgccgcc cgcaccacct ttgccccaca
     1921 cttcggtcag ggaaacttca acgccgtgtt cggcacaggc tttttcaatc atcgccaact
     1981 cggcatcgga gtcggacacg aagcggttga gcgcaacgac gacgggcagt ccgaatacgt
     2041 ttttcaggtt ggaaatgtgt ttcagcaggt tgggcaaacc tttttccaaa gcgtctaaat
     2101 tttcttcgcc gaggttggcg cgttccacgc cgccgttata tttcaacgcg cggacagtcg
     2161 ccacgacaac agccgcatca ggtttcaaac cggcaaggcg gcatttgatg tcgcagaatt
     2221 tttccgcgcc caagtccgcg ccgaagcctg cttcggttac ggcgtaatcg gcaaggtgtt
     2281 tcgccagacg ggttgcggtt acggagttgc agccgtgggc gatgttggcg aacgggccgc
     2341 cgtgtacgaa ggcgggcgtg ccttcgatgg tttgcaccaa gttgggctta atcgcatctt
     2401 taagcaatgc cgccatcgcg ccattcgctt tcaaatcttt ggcgtaaacg gggctgccgt
     2461 ctttggcgta ggcgacaagg atgttgccca aacgctcttt caaatcgctg atgtctttgg
     2521 caagacagaa taccgccatc acttcggaag caacggtaat atcgaaaccg tcaggacgca
     2581 tcacgccgtc aacaggcttg cccatgccgt cgatgatgtt gcgcaactgg cggtcgttca
     2641 tatcgaccac gcgccgccac agcacgcgtt tggggtcgat gttcaactcg ttgccttggt
     2701 agatatggtt gtcgagcatc gcggcaagca gattatttgc cgcaccgatg gcgtgaaaat
     2761 ctccggtgaa gtgcaggttg atgtcttcca tcggcaaaac ttgggcatag ccgccgcctg
     2821 ccgcgccgcc tttcacgccg aacaccggcc ctaaagaagg ttcgcgcagg gcaatcacgg
     2881 catctttgcc gatgtggcgc aacgcgtccg ccaaaccgat ggttacggtg gttttgcctt
     2941 cgccggcagg agtcgggttg atggcggtta ccaaaatcag cctgccttgt ttttgcggca
     3001 gtttaaacgc ttcggcagga ttgattttgg ctttgtaatg accgtaaggc tcaatgttgt
     3061 cggcgttcag gcccagcttg gcggcaattt cgccaatcgg gcgcatggtg gaagactggg
     3121 cgatttcggc atcggttttg aagctcatga ttttccttta gaaatgagga gggacatacc
     3181 gtctgaaagc atcaggcgac aaacaggtgg attgaaaata atatcaggca tattataacg
     3241 ttatccgcac caaacccgca gtgaaatttt tgacgctgca acaaaaatac cgttcatatt
     3301 gttcacaatc caaggagaaa acatgggcag caacgcatgg ctgttttggg cattggcatc
     3361 ggcaggcttc gcctcattga ccgccgtttt cgccaaaatg ggcttgcagg gtatagattc
     3421 agatttcgct accttcatcc gcaccttggt catcctcgcc gctttggtac tgtttttgac
     3481 ctacaccggc aaatggcagg gcgtgaacgg ctttacgggg cacaactgga cattccttat
     3541 cctatccggc cttgctaccg gcgcatcttg gcttgcctac ttcaaagccc tgcaactggg
     3601 taacgcctcg caagtcgccc ccgtcgataa attcagcctg gttctggtcg cgctgatggc
     3661 ggtggttttc ttggacgaac gcccgaacac gcaggaatgg ataggcttgg ggctggtaac
     3721 ggcgggcgtg ttggtgctgg cgttgaaacg ttaaaccgaa tccgccatac cgcctgaaac
     3781 cgggttttga caatctgacg ggcggcggtc tgaacaaagt tacccaataa aatccgacac
     3841 cgcgccgacg gcaaaccgcc gcgcttcaga tggcatttgt tggacggaaa gccccgaacg
     3901 ccctattttc acgcctccac gaaaatatgc cggacatccg gtcggaaccg ttcggcagcc
     3961 ggctcggcaa gccaccgttt tatttcactt ccaagcccct gcaagggctt gagcctcttt
     4021 cagacggcat accgtgccga catccagcca caagcccgta tgcttctgac cgctcacgcg
     4081 gttttgccgc atttcgttcc gcaatacggg cgcgagtttc gccacactgc ccgcttcgat
     4141 tccgtcaaac atttcaggac ggtaaatacc cacgccgcta aatgtcaatc cgttgccgcc
     4201 atttacttcc ggccgcacgc tgccgtcggg cagcagggaa aaatcgccgt caggatggtg
     4261 cgggggattt tccaccagcc acagatgggc ggaaatgtgc tcgggcaggg acgatgccgc
     4321 ctgaaacgcg gcggtaaaat cgatgtcggt caacacgtcg ccgttgacca ccaaaaacgg
     4381 ggcatcgccc aacagcggca atgcccgtgc gataccgcct gcggtttcca agccgccttc
     4441 aggttcgggc gaataggcga tgttcacgcc ataagccgag ccgtcgccca aagcctcttc
     4501 tatctgccga cccagccaag cgtggttgat gacgatttcg gtaaaccctg cctgcttcag
     4561 acggcatagg tgccaaccga ttagaggctt acccgccaca tcgagcagcg gcttcggagt
     4621 ggtatcggtc aaagggcgca tacgctcgcc gcgtcctgcc gccagtatca tcgctttcat
     4681 atatatctgt ccgaatatca gtctaaagat ctaaactgcc gtctgaaata aagcagcgcg
     4741 ggacgtttgc ccacgcaatt tttaatttcg tcgagcctga cgtaaaacac aaaatgtgtg
     4801 ccgatttcat gttggccgac aatatgcccg tgcagatgcg ccaacgcgcc ttctatttca
     4861 ggttgtccgg ttttaccgta atgccaaata tgataggcaa aacgttcttc gggtgaaaga
     4921 ttggtcaatc cggcaaaatg ttcggccaca tcctgatgtt cgtctgccaa cgtattgatg
     4981 cacaggctgc cgttttccga caggatcgga atgattcgcg cactccggtt gatgcacagc
     5041 atcacggtcg gcggctcgtc ggtaaccggc gcgaccgccg tcattgtaat gccgtaacgc
     5101 cctgccgcac cgtctgtcgt gatgacatga acgcctgccg cgcaagatgc catcgcatca
     5161 cggaacgaag tttgaaaagt tttctgcaaa tccgccattt ttccccttta aactgtcccc
     5221 tatataagaa tgctgcacac aaggcacccc ccatgtgcag cagttctgat tcaaaaagcc
     5281 gtcggtcgga catttccgcg cgttacggcg tattacgagt tcaacgcatc ctcgattttg
     5341 gcaagttctg ccaacaggtc tttaagcagc agcattttct cgcggcccag cacttcctcg
     5401 atagcgtcgt aacgctcgtc cacttcttcg ccgatttcct catacagctt ctcgccctcg
     5461 gcagtcagct tcagaaaaac acgtcgttgg tcgttggaag gtttcaggcg gacaaccaaa
     5521 cccgcttttt caaggcgggt caggataccg gtcaggctgg ggcgcaaaat gcacgcctga
     5581 ttcgccaaat cttgaaagtc cagcgtgccg ttttccgcca aaagacggat aatccgccat
     5641 tgctgatcgg taatattcgc ctgattcaga ataggcctga attgggtcat cagggcttcc
     5701 cttgcctgta tcagactgat attgatagac gcatgttttg attgggtagg cattgttcaa
     5761 gtctccaagt tatcgaaaat caaactttca aaccgtcggg aaagcctgtg ggcgtaattt
     5821 ttgatgcaac cgttatataa caaaacgaac atatagcaac aatacgctat aaaccgcatc
     5881 ggacgactgg gtataaaaga ctttaattcc gataatccta tctaaaaata ttttaatagt
     5941 tatatcttag tctattttcc ctacaatctc aacaaagtat tacatttact gtcgaaagaa
     6001 ctttcttcca gaaaaaacaa aagccgccgc atcagacgag caaggtatat gccgtttgat
     6061 tctctacata gcgtaaagtt taacaaaaac aaaagttaac cgaaaacatc cgcctgaaaa
     6121 attcgtgcgc gcaagcccca ataactgctg attcccgtcg tatagtgaac cattttccca
     6181 tttttgacca aaacgacggc aggcgttgcg acaatccgcc aagaccttgc caaacccccg
     6241 tcctcatcgt tgaccgtcgg aaagcccaag ccccgctttg ccatatacgc cgccacttcg
     6301 gacgcgctgc cggaacgtac cgccacgccg acgaccggaa cgccgtccgc cgccaaatca
     6361 tcgattatcg gcgactgata acggcacacg ccgcaccagc ttccccaaaa atacaccaaa
     6421 atcgccttat cccggctaaa ctgtcccaaa gtcagccgct gccccgacag cagggtcaaa
     6481 ggccgccctg ccgcaccggc cggctcttcg ggcttgcgta tccaatccaa aaacagcgac
     6541 accaataaaa acaccaatgc cgtctgaacg gcaaatttga tgcccgaaag cagtttcttt
     6601 ttcatacgct ctctcaaacg gtacgcccgc gcaaccggca ggcaaacaaa aagccaagtc
     6661 tcaaaacttg gcttccggtt atctggtggg tcgtgagcga ttcgaacgct cgaccaacgg
     6721 attaaaagtc cgctgctcta ccggctgagc taacgacccg ataagccgtg cattatacag
     6781 caccatccta cctcgtcaag caaattttac aggcttaatt gcagaccact gtttgcacgg
     6841 gatattttga caacggattt tcacaatccg ccgcataccg tgtaaaagtt cgcacaagga
     6901 aaagcaaacc gcccgaaatc aatgtacact ttccgcccgt ttcccaaact gcacacagaa
     6961 acacacatta tgaacataca aaacatccgc accctcctcg acaccgtcgc cgttccgaat
     7021 acggcacgca cgctcggcgg cgaaaaggcc gtccgttcgg tcgaacagcg ttcagacggc
     7081 atccatatcg ccctgcattt cggcttcccc gtcgcgcaca ttgcctcaga aacagccgac
     7141 cgcatacagg aaatcctgat gccgctgaca ggcgacacac acatccatct gtccatggac
     7201 actgaaatcg gcacacacaa agtccagccc ggcgttacca ctattaaagg cgtgaaaaac
     7261 atcatcgccg tcgcctctgg caaaggcggc gtgggcaaat caaccaccac cgccaacctt
     7321 gccgccgcaa tggcgcgcat gggcgcgcgc gtcggcgtac tcgatgccga cctttacggc
     7381 ccgagccagc ccacgatgct gggtgtggac gaccgcaaac ccgatcagaa aaaccaaaaa
     7441 ctcattcccg tcgaatcttc agacggcata caggtcatgt ctatcggctt tctcgtcgat
     7501 accgaccaag ccgtcgtctg gcgcgggccg atggtcagcc aagccttgca gcaactgatg
     7561 tttcaaagcg agtgggacga agtggattat cttttcatcg acctgccccc cggtaccggc
     7621 gacatccagc tcacgctgtc ccaacgcatc cccgttaccg ggtccgtcat cgtaaccacg
     7681 ccgcaggaca tcgcgctgat agacgcgcgc aaggctgtgg atatgttccg caaggtcaac
     7741 attcccattt taggcgtatt ggaaaatatg tccgtccaca tctgcaccaa ctgcggacac
     7801 agcgaagccc tgttcggcac ggacggcggc aaagatttag ccgcacgcct caacgtcccc
     7861 ctgctcggac agcttcccct aagcctgccc gtgcgcgaag caatggacgg cggcacaccg
     7921 gcgcaactgt tcgacgaaca ccccgccatc gcccgaatct acaccgatgc cgcattccaa
     7981 atcgccctgg gcattgccga caaaggcaaa gacttcagca gccggttccc taaaattgtc
     8041 gtcgaataaa gccgcgtccg aaaccgcaac agcaatgccg tcccaagccc cgcgcctgcc
     8101 ggcgggcttc atagtcctct ctccccgtgg gagagggctg gagagagggc aacaagccgc
     8161 aaggcttgta ttggggcggt taagctgttg ggaaagattg ccgcaacttg gagaatgccc
     8221 tctccccggc cctcccccac aggggaggga gcggattgcg gcaggttttg cggttgcagg
     8281 cggtttgaaa aacagattgg atttacaacc gttgatgcag gtcgtctgaa aagcaaaaag
     8341 cagcctgcac aacctgatta gtttacaaaa cccttaaccc caacagcctc cccgtcctct
     8401 ctccccgtgg gagagggctg gagagagggc aacaagccga aaggcttgta ttggggcggt
     8461 tgagttgttg ggaaaggttg ccgcaacttg gaaaatgccg cctccccggc cctcccccac
     8521 gggggaggga gtgggtttcg gcagattttt cggttgcagg cgatttgaaa ggcaacttag
     8581 atttgcagct gttgtttcag gtcgtctgaa aaataaaaag cagcctgcac aacctgtttt
     8641 ccttgcagca aacctcaacc ccaacagccg acccgtcctc tctccctgtg ggagagagct
     8701 agagagaggg caacaagccg aaaggcttgt attggggcgg ttgagttgtt gggaaag
//
LOCUS       DAWKOX010000079         8521 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.079, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000079 DAWKOX010000000
VERSION     DAWKOX010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8521
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.079"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(98..994)
                     /gene="argB"
                     /locus_tag="WJK78_001240"
     CDS             complement(98..994)
                     /gene="argB"
                     /locus_tag="WJK78_001240"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ7598169.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            1164..2294
                     /locus_tag="WJK78_001241"
     CDS             1164..2294
                     /locus_tag="WJK78_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ7598170.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDHQDATARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            2365..3216
                     /locus_tag="WJK78_001242"
     CDS             2365..3216
                     /locus_tag="WJK78_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ7598171.1"
                     /translation="MIIHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVIFGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDLEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(3299..3962)
                     /locus_tag="WJK78_001243"
                     /pseudo
     CDS             complement(3299..3962)
                     /locus_tag="WJK78_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
     gene            complement(4057..5850)
                     /locus_tag="WJK78_001244"
     CDS             complement(4057..5850)
                     /locus_tag="WJK78_001244"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ7598172.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAEAQGRSLDLNAFLQKNESLERTEMTQTNRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGAALQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            6096..7205
                     /gene="proB"
                     /locus_tag="WJK78_001245"
     CDS             6096..7205
                     /gene="proB"
                     /locus_tag="WJK78_001245"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ7598173.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGSALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            7218..8480
                     /locus_tag="WJK78_001246"
     CDS             7218..8480
                     /locus_tag="WJK78_001246"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ7598174.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALFAMADSLEAAAADI
                     LAANRQDLEAAAGNIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYVDKDADLEKAIRIVRNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
BASE COUNT         1909 a         2425 c         2227 g         1960 t
ORIGIN      
        1 tttttcagga atgacggttt ggaaattgcc cgaaacccca aaaacagaaa ccggacaaac
       61 gggttttccg ccaaagccgg cattttccga ctttgcttca ggcatcttcc ccaccgccca
      121 aaatcatcga accgataccg gcatcggtaa agatttccag caaaagcgcg ttgggcaccc
      181 tgccgtcgat gatgtgcgtg gctttcacgc cgttgacggc ggcttcgacc gcggaagcga
      241 ttttcggcag cataccgcca tacagcgtgc cgtcggcaat cagttcatca atccgtttcg
      301 gcgtgagttt ggtcagcaga ttgcccgttt tgtccatcac accggcgata ttcgtcatca
      361 tcaaaagttt ttcggcgttc aattcttccg ccaatttgcc tgccaccaaa tcggcgttga
      421 tgttgaacgc ttcgcctttt tcacctacgc cgacgggggc gacgacggga atgcagccac
      481 gttctatcag ccctttaacc aaaccggtat cgatgctttc caccgtaccg acctgtccga
      541 tgtccacgcc attctgttcg ggcgtatcaa tcaaaagttt cttcgcctta atgaaatggt
      601 cgtcgcgtcc gcttacgccg accgcgtgtc cgccatatgt gttaatcatc gacacgattt
      661 ctttattgac atgcccgccc aacaccattt cgacaatatc catcgcctct ttgtcggtaa
      721 cgcgcattcc ttggacaaac tcaccctttt tgccgacttt ttcaagcatc gcattgatct
      781 gcggcccgcc gccgtgaacg atgacgggat gaatgccgac cagcttcagc agcacgacat
      841 cgcgggcaaa cccttctttc aaggcaggtt cggtcatcgc gttgccgccg tatttgatga
      901 cggcgaccga accggaaaac cggcggatgt aaggcagcgc ttcggcaagg atacgcgcct
      961 tgtcggcggc ggaaataatg ttttcagact ccataacggc tccctattgt taacaatttc
     1021 ggcttatgtt aacgccaaac gccgtctgaa acaatcttca gacggcatcc ggcagacttt
     1081 cgggcaggtt gaagccttgc gatacgggcg gtaaaatcgc ggtttatccg gttcgagaaa
     1141 ccggcgacag caaggacttt cccatgatta aaatcagcac ccgcttcgat gccggctcgg
     1201 tcgtcgtcaa agacctgacc gatccttcca acatccgcct cgccctgcgt cccgacaacg
     1261 cctccgattt tgcacaatgg ttctacttcc ggctgcaagg cgcggcatat caaaactgca
     1321 tcatgcattt tgaaaacgcg gcagaagccg cctacccgaa aggctgggaa ggctatcagg
     1381 cgtgtgcctc atacgaccgc cgcaactggt tccgcgtacc gacttcctac gaaaacggcg
     1441 tactgaccgt caaccatacc ccgctgtcca atagcgtgta ctacgcctat ttcgaaccct
     1501 attccgaaga acagcacctc aacctcctcg gcgacgcgca aggcagcggc ctgtgccgca
     1561 tcgacgactt gggcagcacc gtgcaagggc gcgacatcaa tctgctgacc ataggcaatc
     1621 aggtcgaaag cgatttgaaa atctggatta ccgcccgcca gcatccaggc gaaaccatgg
     1681 cggaatggtt tgtcgaagga ctgctcggca ggctgctcga ccatcaggat gcaaccgcgc
     1741 gcaccctgct cgatcgcgcc acgttctata tcgtccccaa catgaacccc gacggttcgg
     1801 cactgggcaa ccttcgcacc aacgccgccg gtgcgaacct caaccgcgaa tgggaaaatc
     1861 cgactttgga aaaaagcccc gaagtgttct tcgtgcgcga aaaaatgctg gaaaccggcg
     1921 tggatttgtt cttggacatc cacggcgacg aagggctgcc ctttatcttt gttgcaggaa
     1981 ctgaaggcgt gccaaactac aatccgcgca tttccgcgtt ggaaacacag ttcaaaaccg
     2041 cccttttgaa cgccagcccc gatttccaag acgaatacgg ttacgaaaaa gatgcgcccg
     2101 gtcaggcaaa catgaccttg gcaacaaact gggtcggcaa ccgtttcaac tgccttgcct
     2161 atacgttgga aatgcccttt aaagacaatg ccaacctgcc cgacgacgat ttcggatgga
     2221 acggtcaacg gtcgttgcgc ttgggcgaag ccgcgttgtc cgccatcctc aacatcatcg
     2281 gcgatttgcg ctgaaaccct tattgcagaa atgccgtctg aagcatcatg cctttcagac
     2341 ggcatttgaa aacgaaagcc tgttatgatt atccatcccc aattcgatcc cgtcctcatc
     2401 agtatcggcc cgcttgccgt ccgctggtat gccctaagct acatcctcgg atttattctt
     2461 tttacctttc tcggcagaag gcgcatcgcg caaggcttgt ccgtttttac caaagaatcg
     2521 cttgacgact tcctcacttg gggcattttg ggcgtaattt ttggtgggcg tttgggttac
     2581 gtcctgtttt acaagttttc cgactacctc gcccatccgc ttgatatttt caaggtatgg
     2641 gaaggcggaa tgtcgttcca cggcggcttt ttgggtgtag ttattgccat atggttgttc
     2701 ggccgcaaac acggcatcgg cttcctcaaa ctgatggaca cggtcgcacc gctcgttccg
     2761 ctgggtctcg cttcgggacg tatcggcaac ttcatcaacg gcgaactttg gggacgcgtt
     2821 accgacatca acgcattttg ggcaatgggc ttcccgcagg cgcgttacga agacctcgaa
     2881 gccgccgcgc acaatccgct ttgggcagaa tggctgcaac aatacggtat gctgccgcgt
     2941 catccctcgc agctttatca gtttgcactt gaaggcatct gcctgttcgc cgtcgtttgg
     3001 ctgttctcta aaaaacagcg gccgaccgga caagtcgcct cgctcttcct cggcggctac
     3061 ggcatattcc gcttcattgc cgaatttgca cgccaacccg acgactatct cgggctgctg
     3121 accttggggc tgtcgatggg gcaatggttg agcgtcccga tgattgtttt gggtatcgtc
     3181 ggctttgtcc ggttcggcat gaaaaaacag cactgaccgc ctgtgaaaaa taccgtctga
     3241 aacatggaaa tccggtttca gacggcattt ttacgtttgg ttcatggaaa caaacgcttc
     3301 aattcttacc gcaacacgcc ttgtattttc tgccgctgcc gcacggacag ggatcgttcc
     3361 tgcctgtttt ttcgccttcc ctgcggacgg tttgcggctt tgttgatgac cgcctgccag
     3421 tagcggtaga tatccgccaa tgcataaggc aactcggatt ccagttccgc cagctcgcct
     3481 tctgtgaatt gcagacggat agtgccgttg tcctcttcgt cgtaaatacc gcccaatgcc
     3541 atgatgggat aaaacaactc ttcaaacgct tcatcatcga cggcttcaaa ccaatcggtc
     3601 ggcacaatat ccaaaccgta aagataagca ttgcaccatg tgtaaaaatc gctgccgccg
     3661 tcttcgtttt catacagcca caaatcgggc agttttttat ccgacatcgc ggcggttgtt
     3721 tccatcgcca ttgccaaaac cagccgttcg atttcggaac gttcggcggc ggtaaattgc
     3781 gattcgtcgc ccaacacttc gggcagccag tcgagcggtg tcaatttgtc cggcccgctc
     3841 aacagcgccg tcataaaacc ttgaacctcg tcgcaacgca tcgtgttgcc ttgttcgctt
     3901 ttggcatcca acaattcgct caaccgccgt ttggatgctt cggtaaattt tcgggaatcc
     3961 atcattttcc ttttcaaatg ggttttgcgc cctattatcg ccgcaatgcc gtctgaagcc
     4021 tttttatgct tcagacggca tcgtctgttt tcacgctcaa atcgtaccgc tgccttgcgc
     4081 tttcggtttg gcggcactaa attccagttt gctcaaagcg gaaaggtagg ctttggcggt
     4141 ggcgaccaaa acgtcggtat ccgcgccctg accgttgacg acgcggttgc cgcgcgccag
     4201 acggacgctg gtttcgccct ggctttccgt accttgcgtg acggcgttga cggaataaat
     4261 ctgcaaagcc gcgccgcttt gcgccacgct ttcaatcgct ttgaaaatcg catccacggg
     4321 gccggagcct gtggcggaag cgcgtttttc ttcgcctttg atgctgaaca cgatgtcggc
     4381 gcgcggctct tcgccggttt cggtgctgat tttttgggag atgaatttgt agctctcggc
     4441 attcatgctg cccatttcgt cggataccag tgcgtgcagg tcttcatcga agatttcgcg
     4501 ttttttgtcg gcgagttctt tgaagcgggc aaacgcggcg ttcagtgcct cttcgctttc
     4561 caactcgatg cccaaatccg ccagcttggt tttgaaggcg ttgcggccgg acaatttgcc
     4621 caagctcaaa cggtttgttg cccagccgac cgattcggcg gacataatct cgtaagtttc
     4681 gcggtgtttc agcaccccat cctgatggat gcccgattca tgcgaaaagg cattggcacc
     4741 gacaatggct ttgttgggct gcacgggata gcccgtaatg gtggacacca gtttggacga
     4801 aggcacgatt tgcgtggtat cgatgccggt ttccaagccg aacaagtcgt ggcgcacttt
     4861 caacgccatc acgatttctt caaccgaagc attgcctgca cgttcgccca agccgttgac
     4921 agtacattcc acctgacgcg cgccgccttt taatgcggca agcgaattgg caaccgccaa
     4981 gcccaaatcg ttgtggcagt gtgccgacca aacgactttg ccgccgttgg gcgttttggc
     5041 aatcagttcg cggaaaaatt cttcggtttt gtacgggatt gaatagccga cggtatcggg
     5101 aatattgatg gtggtcgcgc ccgcttcaat caccgcgccg cagatttcgg caaggaaatc
     5161 gatttccgaa cgcaacgcgt cttcgcagga aaattccaca tcgtcggtgt attcacgagc
     5221 gattttcacc gctttgaccg ccgcctcaat cacctgcttc ggcttcatct tcaatttgta
     5281 ctccatatgg atggggctgg tggcgatgaa ggtgtggatg cgttttttcg gcgcgggcgc
     5341 aacggcctca cccgcctgac ggatgtcccg ctcgatggcg cgggacaatg aacagaccgt
     5401 tgatttggta atggttttcg caatcgcatt gaccgcctcg aaatcgcccg ggctggcagc
     5461 ggcaaaaccc gcttcgatga tgtccacacc caatttttcc agctggcggg cgacgcggat
     5521 tttttcctct ttggtcatag cggcgccggg cgactgctcg ccgtcgcgca gggtggtatc
     5581 aaaaataatt acgcggttgg tctgtgtcat ttctgttctc tccagagatt cgtttttttg
     5641 taaaaaagca ttcaaatcca gcgacctgcc ttgcgcttca gccaacgcgg tcagcttttg
     5701 cagttgcgcc aggggcagcg acccgcgcgt gcgccattta tagatggcgg cggtcgtcgc
     5761 ggcattttcg ggatcgtgct gtttcaacgc ttcggcaagc gcgttcacgc cgccgaaata
     5821 agcaaccaag cggtctatat ctaattgcat ggtagtcctt gtctaaaata aatcagccta
     5881 cagcagaaat atggacagga ttatacgcat tttggacaaa acggcaatat aaatttgaaa
     5941 aatctcaata agccgccata gattttatta attttataca ttttgtctat tttatcgcag
     6001 acgcggcgtg attgttgaca attgcggcag aacagggcaa attcggcggc acaaggcggc
     6061 aaacgagaca ggacaaacca acaaggacgg aaacaatgaa atacaaaaga atcgtattta
     6121 aagtcggcac atcttcgatt acccattcgg acggcagtct ctcgcgcggc aaaatccaaa
     6181 ccatcacccg ccagcttgcc gcattgcatc atgcgggaca cgagctggtc ttggtgtctt
     6241 ccggcgcggt tgcggcaggg ttcggtgcgc tgggtttcaa aaaacgtccg gtcaaaatcg
     6301 ccgacaaaca ggcttccgcc gccgtcgggc aggggctgct gatggaagaa tatacggcaa
     6361 acctgtcttc agacggcatc gtgtccgcac aaatcctgct cagccgcgcc gactttgccg
     6421 acaaacgccg ctaccaaaat gccggcagcg cactttccgt gctgctgcaa cgccgcgccg
     6481 tccccatcat caatgaaaac gatacggttt cggttgagga attgaaaatc ggcgacaacg
     6541 acacattgag tgcgcaagtg gcggcgatga tacaggcaga cctcttggtg ctgctgaccg
     6601 acatagacgg tctttacacg ggcaacccga acagcaatcc cgatgccgta cggctggaca
     6661 aaatcgaaca catcaaccat gaaatcatcg aaatggcggg cggctcgggt tcggcaaacg
     6721 gcacaggcgg tatgctgact aaaatcaaag cggcgacgat tgcgaccgag tccggcgtac
     6781 cggtctatat ctgttcctcg ctcaaacccg atgcacttgc cgaagcggca gataatcagg
     6841 cggacggctc gtttttcgtc ccccgtgcca aaggtttgcg gacgcagaag caatggctgg
     6901 cgttctattc cgaaagccgg ggcggcgttt atgtggacga aggtgcggaa cacgctttgt
     6961 ccgaacaggg aaaaagcctg ctgatgtcgg gcattgccgg aatcgaaggg catttttccc
     7021 gtatggacac cgtaaccgtg tacagcaagg caaccaaaca gcccctgggc aaagggcgcg
     7081 tcctgttcgg ttctgccgcc gccgaagacc tgctcaaatc gcgtaaggcg aaaggcgtgt
     7141 tcatccatcg ggacgactgg atttccatca cgcccgaaat acgcctgctt ctgaccgaat
     7201 tttagaaaag gaaacccatg tcaaacacac aaaaacagct tgcccttgcc aaagcggcaa
     7261 aaaaatccgt caacacggcg gatacggaag aaaaaaaccg cgcgctgttt gctatggcgg
     7321 acagcttgga agcggcggcg gcagatattt tggcggcaaa ccgtcaagac ttggaagccg
     7381 cggcaggcaa cattcccgaa agcatgaccg accgcctttt gttggacggc aaacgcattt
     7441 gcgcgatggc ggacggcatc agggcggttg ccgcgctgcc cgaccccgtg ggcgaaatac
     7501 tggaaacctc gactttgccc aacggcttgg aaatcgtcaa aaagcgcgtg gcgatgggcg
     7561 ttatcggcat tatttacgaa agccgcccga acgttacttc cgatgcggcg gctttggcac
     7621 tgaaaagcgg cagcgcggtc gtactccgca gcggcaaaga tgcattccaa tccgcacgcg
     7681 ccatcgttgc cgccctgaaa acggggttgg cacaaacccg catcgacccc gacgcgctcc
     7741 agttgattga agacaccggg cgcgagggca gttacgaaat gatgagggcg aaagattatc
     7801 tagacctgct gattccgcgc ggcggggcgg ggctgatacg ggcggtggtt gaaaatgccg
     7861 tcgtgccggt cattgaaacg ggaacgggca tcgtccacat ctacgtcgat aaggatgcgg
     7921 acttagaaaa ggcaatccgc attgtccgca acgccaaaac cagccgtccg tccgtgtgca
     7981 actcgatgga agtgctgctg gtacatgaag acattgctgc cgacttcctg cccaagctcg
     8041 aacggctgtt ggttcgcgac cgtatagaag ccggactgcc gcccgtccgc ttccgtttgg
     8101 atccgcaggc ggcgcggcat atcggcggcg aagcggcggg tgcagacgat ttcgataccg
     8161 agtttttaga ctacatcctc gccgtgaaaa ccgtcgcttc ggtcgaagag gcggtcgggc
     8221 acatcgaaac ccacggcacg caccattcag acggcatcgt taccgaaaac cgccacgctg
     8281 cggactattt cacgacccat atcgattctg ccgccgtgta tgtcaacgcg tccacgcgct
     8341 ttaccgacgg tggcgaattc ggcttgggtt gcgaaatggg catctccacg caaaaactcc
     8401 acgcccgagg cccgatgggc ttgaaagagc taacgagtta taaatacatc gtacaaggca
     8461 cgggacaggt cagggaataa tccgaattca aacgtctgat atagtggatt aactttaaac
     8521 c
//
LOCUS       DAWKOX010000080         8485 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.080, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000080 DAWKOX010000000
VERSION     DAWKOX010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.080"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(57..1502)
                     /gene="zwf"
                     /locus_tag="WJK78_001247"
     CDS             complement(57..1502)
                     /gene="zwf"
                     /locus_tag="WJK78_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ7598175.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWANNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
     gene            2018..3853
                     /gene="edd"
                     /locus_tag="WJK78_001248"
     CDS             2018..3853
                     /gene="edd"
                     /locus_tag="WJK78_001248"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ7598176.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVTGELNVLINEAE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            4034..4672
                     /locus_tag="WJK78_001249"
     CDS             4034..4672
                     /locus_tag="WJK78_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ7598177.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAVDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     HNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            4687..4905
                     /locus_tag="WJK78_001250"
     CDS             4687..4905
                     /locus_tag="WJK78_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598178.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(4929..5874)
                     /locus_tag="WJK78_001251"
                     /pseudo
     CDS             complement(4929..5874)
                     /locus_tag="WJK78_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            6037..7077
                     /gene="mutY"
                     /locus_tag="WJK78_001252"
     CDS             6037..7077
                     /gene="mutY"
                     /locus_tag="WJK78_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ7598179.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAISAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            7494..8054
                     /locus_tag="WJK78_001253"
     CDS             7494..8054
                     /locus_tag="WJK78_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ7598180.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPA
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
BASE COUNT         2137 a         2361 c         2000 g         1987 t
ORIGIN      
        1 tttacttgcg ttcagacggc atttcaaacc ccatgccgtc tgaacgcatt attgtattac
       61 tgctcttcgt gccacttgtg tccgtcgcgc gccaatagtt cgcgcgcggc ttcaggcccc
      121 cacgagtgtg cgccgtagcc gtgcggcggc gtggtgttat ttgcccagtt ttccaaaatc
      181 ggcatcacat attcccacgc ggcttcgagt tcgtcgcggc ggttgaacaa agcgagtttg
      241 ccgttaatca catccagcag caggcgctcg taagcttccg cgcggcggcc ttccaatgct
      301 ttgcccaaat cggttgccag cggcacggtt tcgaccttat ttcctgcccc cggggttttc
      361 atctgcgtat agaggcgcac ggattcatat ggttgcaact cgataacgag ccggttgggc
      421 gcggtgcgac tgccttcaaa aatatggctg ttcaaatctt tgaagttcaa aacgatttcc
      481 gccactttgc ccgccatgcg cttgccggta cgcaggtaga agggaacgcc cttccagcgt
      541 tcgttttcga tttcggcttt aatggcgacg taggtttcgg taaagctgtc ttgcggaacg
      601 ttgatttctt caagatagcc gttcatgcct ttggcggcgg tatattgtcc gcgcacgaca
      661 ttttcattga cagattcgac ggtcagcggc ttcaatgact tgatgacttt gactttttca
      721 tcgcgcaccg cgtcggcatc caagctggcg ggggcttcca tcgcagtcat gcacagcatc
      781 tgcatcaaat ggttttgcac catatcgcgc aacgcgccgg taatgtcgta aaactcgccg
      841 cgctcttcca caccgagctg ttcggcgatg gtcaactgca cgctttcgat gtatttattg
      901 ttccacagcg gctcgaacat tacattggca aaacgcagcg caagcaggtt ttgcaggctt
      961 tctttgccaa ggtagtggtc gatgcggtaa atttgccctt ctttgaaata acgcgcaaca
     1021 tcggtattga tttgctggga agaagccaaa tccgtaccca acggtttttc caaaaccaca
     1081 cgcacgttgt cggcgttcaa accgattttg gcaaggtttt cacatgtttg cgcgaagaat
     1141 ttcggcgcgg tggaaagata gatgacgaca ttgtcggttt ctttgcgcgc tttgaccaaa
     1201 tcgcccaaag cggcaaaatc gtccggctgc gtaacatcga ctttgagata tgcgagacgt
     1261 tcgacaaacg atgcccaagc ctcatcggaa aaattttctt tcacatggat tttggaactg
     1321 gtttccacct tcgccagaaa accttcggta tccaactcgc tgcggctgac ccctaaaata
     1381 cgcccttcgg gatgaagcag accggcaaca tgcgcctggt acagacaggg caacagcttg
     1441 cgcatcgcca aatcgccggt cgcaccgaac aacaccaaat caaaatttgt ttgtgtactc
     1501 atcgtattat ctcgtcagga aagaattttt cgatgccgtc tgaaacctgt ttcccccatc
     1561 acgctgcatc gcaatatcgg aaacaaaggc aggcggcata atgagtagta atactacaca
     1621 ccgctacact ttttgtctat tcccattttt acaatttatt tgacctagtc caaaaatcgg
     1681 gcaggtttcc cctattccgt tacaacaatc ggaagattct gcgatttaaa tcaaatttct
     1741 tttcgatgtc tgattttttt gtaacaaaat tacaaatttt gtactataat agcacccgct
     1801 tcccactttc agacggcata ccttttaaaa tatagtggat taacaaaaat caggacaagg
     1861 cgacgaagcc gcagacagta cagataatac ggcaaggcga ggcaacgccg tactggtttt
     1921 tgttaatcca ctatactcac cgtctgaata cccgatacaa aaatcagaaa cgcacaaaca
     1981 aatccccaat accccccgtt ccgacaggag accgaccgtg aacactactc ctatccactc
     2041 caaactcgcc gaaatcaccg ggcgcattat tgaacgcagc cgtccgacgc gtgaaaaata
     2101 tctggcgaag atccgcagtg ccaaacaaat gggacgctta gagcgcaacc agctcggttg
     2161 ctccaacttg gcgcacggct atgctgccat gcctaaaagt atcaaaatcg aaatgcttca
     2221 ggaaaccgtc cccaacttag gcatcatcac cgcctacaac gacatggttt ccgcacacca
     2281 gccgtttaaa gacttccctg accaaatcaa agacgaagcg cagaaaaacg gcgcgaccgc
     2341 ccaagtcgcc ggcggcacac ccgccatgtg cgacggcatc acgcaaggct acgccggtat
     2401 ggaactgtcg ctgttctccc gcgacgtgat tgccatgagt accgccgtcg ggctgtcgca
     2461 tcaaatgttt gacggcagcc tgtttatggg cgtatgcgac aaaatcgttc cgggtttgat
     2521 gataggcgcg ctttcgttcg gtcatattcc gggtatcttc gtccccgcag gcccgatgtc
     2581 cagcggtatc ggcaacaaag aaaaagcccg cacccgccag cttttcgccg aaggcaaggt
     2641 cggacgcaac gaacttttga aaagcgaaat gggttcttac cacagcccgg gcacctgcac
     2701 tttctacggc acggcaaact ccaaccaaat gatgatggaa atgatgggcg tgcacctgcc
     2761 tgccgccgcc ttcgtccacc cttacaccga cctgcgcgaa gccctaaccc gctacgccgc
     2821 cggacacctc gcgcgcggca tcaaaaacgg cacgattaaa cctttgggcg aaatgttgac
     2881 cgaaaaatcc tttatcaacg ccttgattgg cctgatggca accggcggtt cgaccaacca
     2941 caccatgcac ctcgttgcca tggcacgcgc cgccggcgtg attttgaact gggacgactt
     3001 cgacgaaatt tcctccatca tcccgctgct cattcgcgtt tatccgaacg gcaaggccga
     3061 cgtgaaccac tttaccgcag cgggcggact gcctttcgtt atccgcgaat tgctgaatgc
     3121 aggcctgttg cacgacgatg tcgataccgt cgtcggacac ggtatgcgcc actacaccaa
     3181 agagcctttc ctcatcgacg gcaaactcga atggcgcgaa gcccccgaaa ccagcggcaa
     3241 cgacgacatc ctgcgtaaag ctgacaaccc gttctccccc gacggcggtc tgcgcctgat
     3301 gaaaggcaac atcggacgtg gcgtgattaa agtgtccgcc gtgcgcgaag gctgccgcat
     3361 tattgaagcg cctgccatcg tgttcaacga ccaacgcgaa gtgttggctg cgtttgaacg
     3421 cggcgagttg gaacgcgatt ttgtgtgcgt cgtccgctac caaggcccgc gtgccaacgg
     3481 tatgcccgaa ttgcacaaac tgaccccgcc tttaggcatc ctgcaagacc gcggcttcaa
     3541 agtggcgctg ctgaccgacg gccgtatgtc cggcgcgtcc ggcaaagttc cagcctccat
     3601 ccacatgaca cccgaagccc tgatgggcgg caacatcgcc aaaatccgta ccggcgacct
     3661 gatccgcttc gactccgtta ccggcgaact caacgtcctg attaacgaag ccgaatggaa
     3721 cgcccgagaa gtcgaaagca tcgacttggg cgcgaaccaa caaggctgcg gccgcgaact
     3781 tttcgccaac ttccgcagca tgaccagcag cgccgaaacc ggcgcgatga gcttcggcgg
     3841 cgaatttgcc tgatgcgcgt ttcagacggc cttttcagac cgaaggccgt ctgaaaaatt
     3901 attcaagtgt tttaagatag acgtaggtcg gattctcgaa tccgacacag ccgtccaaga
     3961 tgtcggtttc ttgaatccga cctacaacct gtcccatctt aataaaatac cccatcccac
     4021 ccggagaacc gaaatgtcca aactgacccc ccgcgaaatc ctgaccgccg gcgcagttgt
     4081 accggtaatg gcgattgacg acttgagtac tgccgtcgat ttgtcccacg cccttgtcga
     4141 aggcggcatc cccaccctcg aaatcaccct gcgcacccct gtcggcctcg atgccatccg
     4201 cctgattgcc aaagaagtgc ccaacgccat cgtcggcgcg ggtacggtta ccaaccctga
     4261 acagctcaaa gccgtcgaag acgcaggcgc ggttttcgcc atcagcccgg gtttgcacga
     4321 atccctcgcc aaagccggcc acaacagcgg catccccctg attcccggtg ttgccacccc
     4381 gggcgaaatc caactggctt tggaacacgg catcgacacc ctcaaactct tccctgccga
     4441 agtcgttggc ggcaaagcca tgctcaaagc cctgtacggc ccttacgccg atgttcgctt
     4501 ctgcccgaca ggcggcatca gcctcgccac cgcgcccgat tacttggcac tgcccaacgt
     4561 cctgtgcgtc ggcggctcat ggctgacgcc gaaagaagcc gtgaaaaaca aagactggga
     4621 caccatcacc cgtctcgcca aagaagcggc ggcattgaaa cccaaagcct gaaccgcatc
     4681 gtaaaaatgc cgtctgaagc cctttccagt ctcagacggc attttgccgc ttggcggcgc
     4741 agtcggcata cacggcagca ccactccgac atactgcccc taaaatgccc atccgccttc
     4801 cgcataataa aaataacgtt cagttcattc gacagcagcc ggacagccca tactacgcgg
     4861 ctgaaaaaat gccgtctgaa acgcattcag acggcatccg cttaaaaaaa caactgattc
     4921 aaggccgatt aatccgcttc caaaaccact ttcatcgctt gattttcggc ggcgtgtttg
     4981 aacacgtcgt aggctttttc caattcgctg aatttgaaac ggtgggtcaa cattttggtg
     5041 taatcgacgg agctgctgga aattgccttc atcagcattt cggtggtatt ggcgtttacc
     5101 aggccggtag tgatggcaag ctttttaatc cacagttttt ccagtttgaa atcaacggat
     5161 tgaccgtgta cgccgacaac ggcgatatgg ccgccgggtt tcacaatgtc ttggcacata
     5221 ttccaagttg cagggatacc gacggcttcg atcgcgcagt ccacgccgtc ttcgccgacg
     5281 atagcgacaa cttgcttgct tacatcgccg gaagcagggt taatggtatg ggttgcgccc
     5341 aactctttcg ccagtttcaa acggttttcg tccatatcgc aaacaatgat ggcggcgggg
     5401 ctgtacagtt gggcggtcgg caaggcgtcg ctcaacaaca gggcgacttc ttcgttgacg
     5461 ttgtcgggca gcggcacgag gctgttgtcg gcataaggcg tgcggacgta ttctgcctgc
     5521 gtgccgtcaa tcatgtagcc caaaatccag ccgccgttgc ggcaatgcga ataaagttgg
     5581 attttgcagt tgtcgcaagt acagcatttg ctgacgcatg aaataatgac tttatcgccg
     5641 actttgatgt tttttacagc ctcgccgact tcttctacaa taccgatgcc ttcatgaccg
     5701 agaatacggc cgtcggcgac ttcgggtttt tttgcctttc caaataccca aatcggtacc
     5761 gcaaatcgtg gttttgacga ttttcaccac cgcatcggtc ggatcgataa tctgcggacg
     5821 gggtttttct tcaaaacgga tgtcgtttgc gccgtgataa accattgctt tcatgctgat
     5881 actccttgct tgttgataaa taatttcaat accgcaataa agtttcctta tatgagttat
     5941 atgcccctac aaaaaataag tcaataagaa ttattttcac aatgttatac aataacatac
     6001 tattttaaat ataaataaaa ccaccgattg atattaatga acacacccat ccccttctcc
     6061 gaacggctca tccgctggca aaaacaacac ggtcgccacc acctcccttg gcaggtcaaa
     6121 aacccttatt gcgtctggct ttccgaaatc atgctccagc aaacgcaagt cgccaccgtg
     6181 ttggactact atccgcgctt cttagaaaaa ttcccgaccg ttcagacgct tgccgccgcg
     6241 ccgcaagacg aagtgttgtc gttgtgggcg ggcttgggct attacagccg cgcgcgcaac
     6301 ctgcacaaag ccgcgcaaca agtcgtcagg caattcggcg gcacgtttcc gtcggagcgc
     6361 aaagacttgg aaaccctctg cggcgtaggc agaagcaccg ccgccgccat ttctgccttc
     6421 tccttcaacc gccgcgaaac cattttggac ggcaacgtca aacgcgtact ctgccgcgtg
     6481 ttcgcccgcg acggcaatcc gcaggacaaa aaatttgaaa actcgctctg gacacttgcc
     6541 gaaagcctgc tgccgtctga aaacgccgat atgcctgcct atacacaagg tttgatggat
     6601 ttgggcgcga ccgtgtgcaa acggacgaaa cccttgtgcc accaatgccc gatggcggac
     6661 atctgcgaag caaaaaagca aaaccgcacc gccgagctgc cgcgcaaaaa aaccgccgcc
     6721 gaagtaccga ccctgccgct ttactggctg attgtccgca accgggacgg cgcgattttg
     6781 ctggaaaaac gccccgccaa aggcatttgg ggcgggctgt attgcgtgcc gtgttttgaa
     6841 agtttgaacg ggctttccga ctttgccgcc aaattctccc tgaccatggc agatatggac
     6901 gaacaaaccg ccctgaccca ccgtctgacg caccggctgc tgatgattac gccgtttgaa
     6961 ggacaaatgc cgtctgaaag cccttcagac ggcatttgga taaagccggc gcatttgaaa
     7021 gattacggcc tgcccaagcc tttggaaatt tatttaaacg gtaataggtt agaataaaca
     7081 aaataaaccc attgaactgt tgtttgcagg tatcgcagca agaacaaccg atgaatttgg
     7141 gtcgtatttt aggcggtggg ataatgttca aatgggacat ttggaacgga agaagtcggc
     7201 aatttaaaaa ggatttaaaa agcaaagaag gtcaaaaaca tgaacacaaa cttaaatgac
     7261 aaagacaaag ccatggatac cgcaatcagg tttcagaaaa ggatgaggat tccgaaattt
     7321 ttctttttaa ttctctgaat cacaatggtt ttggcattta tccaagacgt gataacgggt
     7381 tctaattttc tgcaaataac aattaatgta aaattttcgt aaaaatttat cggcttttaa
     7441 aacaaaattg actaaaatag tcgcgagttt ttactgcaat aaaggagatt gcaatgaata
     7501 tgaaaacctt attagcacta gcggttagtg cagtatgttc agttggtgtt gcgcaagcac
     7561 acgagcataa tacgatacct aaaggtgctt ctattgaagt gaaagtgcaa caacttgatc
     7621 cagcaaacgg taacaaagat gtgggtacag tgactattac tgaatctaac tatggtcttg
     7681 tgtttacccc tgatttacaa ggattaagcg aaggcttaca tggtttccac atccatgaaa
     7741 acccaagctg tgagccaaaa gaaaaagaag gtaaattgac agctggttta ggcgcaggcg
     7801 gtcactggga tcctaaaggt gcaaaacaac atggttaccc atggcaagat gatgcacact
     7861 taggtgattt acctgcatta actgtattgc atgatggcac agcaacaaat cctgttttag
     7921 caccacgtct taaacattta gatgatgttc gcggtcactc tattatgatc cacacgggtg
     7981 gtgataatca ctccgatcat ccagctccac ttggcggtgg cggcccacgt atggcatgtg
     8041 gcgtgattaa ataattcgat tgttcgaaac gaaaagtgcg gtgaattttg accgcacttt
     8101 tttgctagat atttagcatt taattcacga cttcagcagt atagtgaatt aaatttaaac
     8161 cagtacagcg ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg ctgaagcacc
     8221 aagtgaatcg attccgtact atttgagacc tttgcaaaat tcctttccct cccgacaacc
     8281 gaaaccccaa cacaggtttt cggctgtttt cgccccaaat atctcctaat tttacccaaa
     8341 taccccctta atcctccccg gatacccgat aatcaggcat ccgggctgct ttttaggcgg
     8401 caacaggcgc acttagcctg ttggcggctt tcaacaggtt caaacacatc gccttcagat
     8461 ggctttgcgc actcactttg agcag
//
LOCUS       DAWKOX010000081         8481 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.081, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000081 DAWKOX010000000
VERSION     DAWKOX010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8481
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.081"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(142..1338)
                     /locus_tag="WJK78_001254"
     CDS             complement(142..1338)
                     /locus_tag="WJK78_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ7598181.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKDLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            1689..1988
                     /locus_tag="WJK78_001255"
     CDS             1689..1988
                     /locus_tag="WJK78_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598182.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            1988..2173
                     /gene="ccoS"
                     /locus_tag="WJK78_001256"
     CDS             1988..2173
                     /gene="ccoS"
                     /locus_tag="WJK78_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ7598183.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            2163..3473
                     /locus_tag="WJK78_001257"
     CDS             2163..3473
                     /locus_tag="WJK78_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7598184.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRYKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            3631..4365
                     /gene="dnaQ"
                     /locus_tag="WJK78_001258"
     CDS             3631..4365
                     /gene="dnaQ"
                     /locus_tag="WJK78_001258"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ7598185.1"
                     /translation="MIQRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGKVYLAMTRRQFDLMGEAEEEEPAAKPVASAEMKLGAKLKVIKADEAELAAHG
                     QYLDGLGEACIWRKEAVPSENGGADA"
     gene            4362..5051
                     /locus_tag="WJK78_001259"
     CDS             4362..5051
                     /locus_tag="WJK78_001259"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ7598186.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFER
                     HEGVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLEIGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIRPLLVQGDARNLKLTQPQD
                     AYIVRLLLDAV"
     gene            5083..5565
                     /locus_tag="WJK78_001260"
     CDS             5083..5565
                     /locus_tag="WJK78_001260"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ7598187.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTASEFKDADSRALLRDAYRSVQAKGWHVVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            5642..6313
                     /gene="rpiA"
                     /locus_tag="WJK78_001261"
     CDS             5642..6313
                     /gene="rpiA"
                     /locus_tag="WJK78_001261"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ7598188.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            6382..7053
                     /locus_tag="WJK78_001262"
     CDS             6382..7053
                     /locus_tag="WJK78_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ7598189.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWTDSVGE
                     WLGIW"
     gene            7232..7978
                     /locus_tag="WJK78_001263"
     CDS             7232..7978
                     /locus_tag="WJK78_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ7598190.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
BASE COUNT         1855 a         2048 c         2515 g         2063 t
ORIGIN      
        1 tttaaattta atccactata aggttcaggt aagcggctgc aaccgtcaat gtctgaaaag
       61 aggcagtgct gtttaagcat ggaaagccgg ataaaaaaaa ctgcctccgt ttccggaggc
      121 agttcgtgtg cggataaaac cttacagacc gctcaaacgg gcagtgtcgt gggcaatcat
      181 cagctcttcg ttggtcggaa tgaccacggc aacggctttg ctgtcggcag tggtaatcac
      241 gccggcgttg ccgaagcggg ctttcaggtt ggcttcttgg tcgatgttca gaccgaggaa
      301 gcccaagtag ccgatcacgc gttcgcggat gatgtcggag ttttcgccga tgccgccggt
      361 aaagaccagt gcgtccaaac cgcctgcggc aaccgccata ctgccgatgt atttggcaag
      421 gcggtagata aacatatcca aggccaattt cgcgccttta tgccccttgg cggcttcttc
      481 ttcaatggtg cggcagtcgt tggacaggcc ggaaatgccg agcagaccgg attttttgtt
      541 cagcatttca gtgatttggg cgatggtcat attggcgttt tcggcgagaa agccgaatac
      601 ggaaggatcg atgtcgccgc tgcgcgtacc cattaccagc ccttccagcg gggtcaggcc
      661 catactggtg tcgcgcgatt cgccgttggc gacggcggta atggacgcgc cgttgcccaa
      721 gtgggcaatg accatacgca ggtctttttt gtctttgccg aggaagcgcg cggtttcgtc
      781 ggcgacgaag cggtagctgg taccgtgcgc gccgtaacgg cgcaggccgt atttttcata
      841 caactcctgc ggaacggcgt atttgtaggc gacttcgggc atggtttggt ggaaggaggt
      901 atcgaatacg acgacgttgg gcaggtcttt gaaaatgctt tgcgcggcac gcaggcccaa
      961 gaggtgggcg gggttgtgca ggggggcgag cgggatgcat ttttcgatgc cggcaatgac
     1021 ttcgtcgtca acgaggatgg attcgctgta cagttcgccg ccgctgacga cgcggtggcc
     1081 gatggcgccg atgcggctgt cgaggccgtg ggctttgagt tcttccatca gggcttcgac
     1141 cgcgccggtg tggtcgggat gtgcggacag atcgactttg tgtttttcgc cgtttacttt
     1201 gaatgtgatg taggcatcgg gcaggttgag tttttcggca aggcagctga gcaggacttc
     1261 gccgctgccg ttatccagga ccgcgccttt gagggacgag ctgccgcagt tcaaaaccaa
     1321 gatcaatttt tgggacattt tcttactccg gaaagtttca gacggcattg gaatcggaca
     1381 cggatactaa ccggattcgt gccgaatccg ttttgccttc ctaggcggga aagtagtggg
     1441 gccgtctgaa acggttgata aaagaagcag gctattctaa caaaaaatct ttgcaattgc
     1501 ttggcttaat cgggcgtttg cgtgaaaatg gcggaagtcg ggtattttga cggaaaaaag
     1561 ggggatatgc ggtttgccgg tgttttcggc tgggggaggg agaatttctt tgcattcttc
     1621 ccgtccaaac tggtacattc gccctgtttt tagttggtgt cgtctgaaaa aaggcgggtg
     1681 ggaaatttat gcattatttc agtattcatg accaatcggg acggcatata ggctttttca
     1741 tcctgcttgc cgacgacgaa tcggaagcac ggccgcaaag cgggcgtttt gccgtcaaac
     1801 ttgaaggcgg aatggaaaat catgtcctgt cgccgttcgg tcagacggaa attccccaat
     1861 attggcgcgt ggtcaaagac cgtatcgagc tgttttttga cgaagctccc gtcggaactt
     1921 tgcgtaacga atatctgacc gtgtcggggc agacttttgt tttgaacgat ttgacaggga
     1981 atatgtgatg gaaagcatgt ttatattggt gcccatcagc attattttgg cgtttgtcat
     2041 cggctggttt ttttggtggt cgggcaaaaa cgggcagttt gacgacttgg aagggccggc
     2101 gcaccgcatc ctgatggatg atgattcgac aagtaaactg attgaaaaag agagggaaaa
     2161 cgatgtacgc taaaaaaggc ggtttgggac tggttaaaag ccgccgtttc gcacctcttt
     2221 tcgctacgca gtttctcggc gcgttcaacg acaatgtgtt caaaaccgcg ctgtttgtga
     2281 tgattgggtt ttacggtttg gggcaaaacg gcttcctgcc tgccggacag atgttgaact
     2341 tgggcgcgtt gttgtttatt ttgccgtatt tcctgttttc ctcgctgtcg gggcagttgg
     2401 gtaacaaatt cgacaaggcc gttttggcgc gttgggtcaa ggtgctggaa atgatcatta
     2461 tggcggtggc ggcatacggg ttttatatcc ggtctgcccc gctgcttttg gcgtgtctgt
     2521 tttgcatggg cgcgcaatcg acgctgttcg ggccgctgaa atacgccatc ctgcccgatt
     2581 atctcgacga caaagagttg atgatgggca acagcctgat tgaatcgggt acgtttgtcg
     2641 ccatcctgtt cggtcagatt ttgggaacgg cggtggcagg tgtaccgcct tatattgtcg
     2701 ggatactggt tttgctggtc gccgtcggag gcacggtcgg cagcctgttt atgccgtccg
     2761 tccccgccaa ggctgccgat acccaaattg agtggaatat tgtccgtggc acaaaatccc
     2821 tgcttcgtga aacggtgcgg tacaaacccg tctttaccgc tattatcggt atttcgtggt
     2881 tttggtttgt cggcgcggtc tatactacgc aactgccgac ctttacccaa atccatttgg
     2941 gcggcaacga caatgttttc aacctgatgc ttgccctgtt ttccatcggt attgccgccg
     3001 gttcggtact gtgtgccaag ttcagcaggg aacggctgat gttggcttgg gtaacggttg
     3061 gtgcgttggg tttgacggtt tgcggcctgg ttttggtgtg gctgacgcac ggacaccgtt
     3121 ttgaagggct gaacggcatt ttttggtttt tatcgcaagg atgggcatat cccgtgatgg
     3181 cggtgatgac gctgatcggc tttttcggcg gatttttctc cgttccgctc tatacttggc
     3241 tgcaaaccgc cagtagcgag actttccgcg cccgcgccgt tgccgccaac aatatcgtta
     3301 acggtatttt tatggtttcc gccgccgttt tgagcgcggt gttgctgttt ttgtttgaca
     3361 gcatttcctt gttgtatctg attgtcgctt tgggcaatat tccgttgtcg gtatttttga
     3421 ttaagcgcga aaggcggttt ttaggcgcgg cggcaatcag gaaaaaacct tgaatgccgt
     3481 ctgaaaaaat tgtccccaaa atacacaatc cgcctgccca atgttgtgaa cacactgtga
     3541 ataagtgggt ttgtgcattg aaatgaaaac agaaaaatat attgcttaaa aaatagtcag
     3601 cagatggaaa atttgaagaa agaagcagac atgattcaac gccaaatcat cctcgatacc
     3661 gaaaccaccg gtctgtatgc cgacggcggc gaccgcttgg tcgagtttgc cggtttagaa
     3721 atggtcaacc gccaaatgac cgacaaaaac ctgcacctct atgtccaccc cgagcgcgat
     3781 atgcccgaag aggcggcgag ggtgcacggt ctgacgatag aggttttgga agggaaaaac
     3841 gcgccgccgt ttgcagaggt cggcaggcag attgccgatt tcctgcgcgg tgcggaactg
     3901 attatccaca atgccaaatt cgacgtgggc ttcctcaata tggagttccg ccggatgggg
     3961 ctgccgactg tcgaggaact cggctgtacc gttaccgata ccctggcgat ggcgcgcgaa
     4021 atgttccccg ggcagaaagc cagcctggat gccttgtgca accgtttttc cgtcgaccgc
     4081 agcaagcgcg tcctgcacgg cgcattgatc gactgcgaac ttttgggcaa agtctatctt
     4141 gctatgacgc ggcggcagtt cgacctgatg ggggaggccg aggaggaaga gccggcagcc
     4201 aaacctgttg catctgccga aatgaaactc ggtgccaaac tgaaagtgat taaggcggat
     4261 gaagccgaac tggcggcgca cgggcaatat ttggacggct tgggcgaagc ctgtatctgg
     4321 cgcaaggaag ccgtgccgtc ggaaaacggc ggggcggacg catgaagcgc aaaaatatcg
     4381 cgctgattcc cgccgccggc atcggggcgc gtttcggtgc ggacaaacct aagcagtatg
     4441 tcgaaatcgg aagcaaaacc gttttagaac atacgattgg gatttttgaa cggcatgagg
     4501 gcgtcgattt gaccgtcgtt gtcgtctcgc ccgaagacac gtttgccgat aaggttcaga
     4561 cggcatttcc acaggttcgg gtgtggaaaa acggcggaca gacccgcgcc gaaaccgtcc
     4621 gaaacggtgt ggcaaaactg ttggaaatcg gtttggcggc ggaaaccgac aatattctgg
     4681 tacacgatgc cgcgcgttgc tgcctgccgt ctgaagcttt gacgcggttg atagaacagg
     4741 cgggcaacgc tgccgaaggt gggattttgg caattcccgt tgccgatacg ctcaagcgcg
     4801 cggacggtgg gaacattagt gcaaccgtcg agcggacgag cctttggcag gcacaaacgc
     4861 cgcagctttt ccgcgccggg ctgctgcacc gcgcattggc tgcggaaaac ttggacggca
     4921 ttaccgatga agcgtccgcc gtcgaaaaat tgggcatccg ccctttgctg gtgcagggcg
     4981 acgcgcgcaa tttgaaactg acgcagccgc aggacgcata catcgtcagg ctgctgctcg
     5041 atgccgtctg aacttcaatt caaaccatca ggaacacaaa cgatgacgaa catccgtatc
     5101 ggacagggct acgatgtcca ccaactgacc gaaggcagaa agctgatact tggcggagtt
     5161 gaaatcccat ttgaaaaagg gctgctcgga cactccgatg ccgatgcgct gctgcacgcc
     5221 gttaccgacg cgctgcttgg cgcggcaggt ttgggcgata tcggcagcca tttccccgat
     5281 accgcctcag agtttaaaga tgcggacagc cgcgccctgc tgcgcgatgc ctatcggagc
     5341 gttcaagcta aggggtggca tgtcgtcaat gtcgatacga ccgtgattgc acagaaaccc
     5401 aaactcgcgc cgcacattcc gcaaatgcgt gccaacatcg ccgccgattt gggcatagac
     5461 atttcgtgcg tcaacatcaa aggtaaaacc aacgaaaaac tcggctatct cggacggatg
     5521 gaaggcatag aggcgcaggc ggcggtattg ctggtacgga tttgaacgcg gcgggcagga
     5581 cgtgcaaaaa aatgttaaga tgacggctgt ttgttgatac ggtttcccaa aggacaaaaa
     5641 tatgacgaca caagacgaac tcaagcgcat cgccgccgaa aaagcagtcg aattcgtacc
     5701 cgaaaacgaa tacatcggca tcggtaccgg ttcgaccatc aactttttca tcgaagcctt
     5761 gggtaagagc ggcaaaaaaa tcaaaggcgc ggtatctact tccaaaaaat ccagtgaact
     5821 gcttgcccaa tatgatattc ccgtcgtttc cctgaacgaa gtatcggggt tggcggtcta
     5881 tattgacggt gcggatgaag tgaaccacgc cctgcaaatg attaaaggcg gcggcggcgc
     5941 acacctcaac gaaaaaatcg tcgccagcgc atccgaaaaa ttcgtctgca ttgcggatga
     6001 aagcaaatat gtttcacgtt tgggcaaatt ccctctgcct gtggaagtcg tcgaaagcgc
     6061 gcgctctctt gtttcgcgca aactgctcgc tatgggcgga cagcccgaac tgcgtatcgg
     6121 ctacaccacg ttttacggca accaaatcgt cgatgtccac ggcttgaata tcgatcagcc
     6181 gctgacgatg gaagacgaaa tcaacaaaat caccggcgta ctcgaaaacg gaatattcgc
     6241 ccgcgatgcc gccgatgtgt tgattttggg gacggaagag ggtgcgaaag tcatctatcc
     6301 ctgccaaggg taatcctgac gttaagatgc cgtctgaaat ccggttcaga gatgttcaga
     6361 cggcatcggc atttgaaaaa tatgcagatt aaaaaaatca tgaaatggct tcccgtcgcc
     6421 ctgtcgcttt tgggcgcgtt gggttatacg ggatacggca gcgaggcggt gcggacggcg
     6481 gttgccgtac tcgacgtact cggcgcggca ggggacgcgg gttccgacgc gcccgctcgc
     6541 cgccgagcat cggcgaaatc cggccaccgc tacacaggca cggtgtccaa agtctatgac
     6601 ggcgacaccc ttcacgttat cgacggcgac ggcgcgaaac acaaaatccg gatggcgtat
     6661 atcgacgcgc cggagatgaa acaggcttac ggcacgcgtt cgcgcgacaa cctgcgtgcg
     6721 gcggcggaag gcaggaaagt cagcgtccgc gtgttcgaca ccgaccgcta ccagcgcgaa
     6781 gtggcgcagg tttctgtcgg caaaaccgat ttgaacctga tgcaggtgca ggacggggcg
     6841 gcgtggcatt ataaaagtta tgctaaagaa cagcaggata aggcggattt tgccgattat
     6901 gccgacgctc aaattcaggc ggaaagggaa cgcaaaggat tgtggaaagc taaaaatccg
     6961 caagcgccgt gggcgtaccg ccgggcaggc aggagcggcg ggggcaataa ggattggacg
     7021 gattccgtgg gcgaatggtt gggcatttgg taaagacacc gcacggcttt gaacggcaaa
     7081 tgccgtctga aaaccgcgcg ccctgcattt ttgcggagac gcgcaaccgc cgtctgccgc
     7141 gataaaaaag ttcaggcggc ggtttttacg gtaaaatggc ggattatttt gcaacggcgg
     7201 cagttccgcc ggtttttgat acggacggtt tatggatttt cgttttgaca ttatttacga
     7261 ataccgctgg atgtttcttt acggcgcact gacgaccttg gggctgacgg tcgtggcgac
     7321 ggcgggcggt tcggtattgg gtctgttgtt ggcgttggcg cgcctgattc acttggaaaa
     7381 agccggtgcg ccgatgcgcg tgctggcgtg ggcgttgcgt aaggtttcgc tgctgtatgt
     7441 tacgctgttc cggggtacgc cgctgtttgt gcagattgtg atttgggcgt atgtgtggtt
     7501 tccgtttttc gtccatcctt cagacggcat tttggtcagc ggcgaggcgg caatcgcgct
     7561 gcgtcgcgga tacgggccgc tgattgccgg ttctttggca ctgatcgcca actcgggggc
     7621 gtatatctgt gagattttcc gcgcgggcat ccagtctata gacaaaggac agatggaggc
     7681 ggcgcgttct ttggggctga cctatccgca ggcgatgcgc tatgtgattc tgccgcaggc
     7741 attgcgccgc atgctgccgc ctttggcgag cgagttcatc acgctcttga aagacagctc
     7801 gctgctgtcg gtcattgctg tggcggagtt ggcgtatgtt cagaatacga ttacgggccg
     7861 gtattcggtt tatgaagaac cgctttacac cgtcgccctg atttatctgt tgatgacgac
     7921 tttcttaggc tggatattcc tgcgtttgga aaaacgttac aatccgcaac accgctgatt
     7981 ggagtcatat caacaaaaag ctgcccgggt attcatttga ggcagctttt ttgtggcaaa
     8041 tttatcgtgg attaacaaaa accagtacgg cgttgcctcg ccttagctca aagagaacga
     8101 ttctctaagg tgctgaagcc ccgagtgaat cggttccgta ctatttgtac tgtctgcggc
     8161 ttcgtcgcct gttctgattt ttgttaatcc actataaatt caaagagaaa aagctatgcc
     8221 gtctgaaagt ctttcagacg gcatctgtca gcctcacgca agagggaatc ccatctgttt
     8281 ggtttcaatt ttttgggtga tgtatgagcc gtcattcccg cgcaggcggg aatcctgtcc
     8341 gttcggtttc tgttgttttt gagtttcggt tttcccgata aatttttgtg gtttccggtt
     8401 ccggattccc gctttcgcgg gaacgacggc ggatggtttc tgtttttttg ataacttcct
     8461 gtgattttgg atttttggat t
//
LOCUS       DAWKOX010000082         8393 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.082, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000082 DAWKOX010000000
VERSION     DAWKOX010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8393
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.082"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(265..1650)
                     /gene="pntB"
                     /locus_tag="WJK78_001264"
     CDS             complement(265..1650)
                     /gene="pntB"
                     /locus_tag="WJK78_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ7598191.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGINGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQTQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1716..2099)
                     /locus_tag="WJK78_001265"
     CDS             complement(1716..2099)
                     /locus_tag="WJK78_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ7598192.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRDFLARTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(2103..3644)
                     /locus_tag="WJK78_001266"
     CDS             complement(2103..3644)
                     /locus_tag="WJK78_001266"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ7598193.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWVCPLIYKVNAPSEQELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKDVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTPSEKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFFVTRRMLN
                     MFRKG"
     gene            3934..4767
                     /gene="serB"
                     /locus_tag="WJK78_001267"
     CDS             3934..4767
                     /gene="serB"
                     /locus_tag="WJK78_001267"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ7598194.1"
                     /translation="MPHALVLQFPSAETLPSDFPSRLPEPDYADEKRMRFIVEEGFSL
                     SEKDAALLGSRQIDHAVLSDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDEQILADVYENVLKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPMLKEAGIGVAYRAKPKAQAAADACINFGGLERVRGLF
                     G"
     gene            4831..6054
                     /locus_tag="WJK78_001268"
     CDS             4831..6054
                     /locus_tag="WJK78_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ7598195.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGTDGVS
                     ISFREGVAQASGMRRVAVLTLCGAVAGSGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLAV
                     NTSLLWFSAVIGPILGATAVFFQRTAQKFPFIKRDNIKIIPLAVCMFALIGVIAVWFP
                     EILGNGKAGNQLTFGGLTGWQHSLELTAVKWLVVLMALAAGAYGGLITPSMMLGSTIS
                     FAAAAAWNSVFPEMPSGSAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            6215..7795
                     /gene="purH"
                     /locus_tag="WJK78_001269"
     CDS             6215..7795
                     /gene="purH"
                     /locus_tag="WJK78_001269"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ7598196.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLTKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLGEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDILSGTPEIGEFPSQFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDICR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRITARKAQDANFDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGIRHFRH"
BASE COUNT         1875 a         2278 c         2384 g         1856 t
ORIGIN      
        1 caagtggaaa aatacttggc agattatcag gcacacttgg aaaaagtgtt cggctaatta
       61 aaaatccatc ttcaacacgg agatggattt tgtttgtttc gttgattttg tgtcagtttc
      121 agatgtaggt gcttattcgg acgggccgtc tgaaaatgtt tgccccaatg caaaaaaatc
      181 actgcaaacc ttcataaacg gggtttgcag tgattttttc aaatcaaaca gattgaaaac
      241 ctgcgccgaa ttgttcagac ggcattattt tttcagttcg gacagaatgt catctacggt
      301 tttcttcgca tctccgaaac acatcacgct gttttcgttg aagaacagtg ggttttgtac
      361 acctgcgtag ccggtattca tcgagcgttt gaagacgacg acttcttttg ccttccacac
      421 ttccaacacg ggcatacccg caatcgggct gttcgggtcg gtttgggcgg cggggttgac
      481 ggtgtcgttc gcaccgatga ccaagaccac atcggtttcg gggaagtcgt cgttgatttc
      541 gtccatttcc aaaacgatgt cgtaggggac tttggcttcg gcgagcagta cgttcatatg
      601 accgggcagg cggccggcga cggggtggat gccgaagcgt acttcggtgc cgtttttacg
      661 taaaagctcg gtgatttcgg caacggggta ttgcgtttgt gcgactgcca taccgtagcc
      721 cggggtaatg atgacattgt ttgcgccttt cagcatttcg gcaatatcgg cagctttgac
      781 ttctcggtat tcccctatct cttggctgcc ggaagataat gtgccgctgt cgctgccgaa
      841 accgccggca attaccgaga caaacgagcg gttcatggct ttgcacataa tgtaggacag
      901 aatcgcgccg cttgagccga ccagcgcgcc ggtaacgatg agcaggtcgt tggagagcat
      961 gaagcctgcc gctgcggccg cccagccgga gtaggagttg agcatggaca cgaccacggg
     1021 catatctgcg ccgccgatgg aggcaaccaa gtgccagccg aatgcgaggg caatcagggt
     1081 cataatcagc aggatgaagc cgctaccgtt aatgccgacg aatacgagca gcaacacaaa
     1141 cgatacggcg agcgccagtg cgttgagctt gtgtttggcg ggcagttgca gcgggctgct
     1201 gctgattttg ccgttgagtt tgccgaatgc gaccagcgag ccggtaaagg ttaccgcgcc
     1261 gatgaaaatg cccaaataga cttcgaccag atggatggtg tgcatatcgt gcgaaacgtt
     1321 gcccggctcg atatagctgt tgaagccgac caaaaccgcc gctaggccga cgaagctgtg
     1381 cagcagggca atcagttcgg gcatttcggt catttccacc tttttggctt tgtagatgcc
     1441 gattgccgcg ccgatgagca tggcgatgat gatccagccc agtccgtggg tattgtcgga
     1501 aaaaacagtt acaaaaaggg cgaccgccat accggcgata ccggaatagc agccctgttt
     1561 ggcggtttcc tgtttggaca gccccgccag tgagaagatg aataaaattg cggcaacgat
     1621 atacgccgct gttacgagtc ctgaagacat ggaaattctc cgattttcga tgatttgttt
     1681 ttaatgccgt ctgaactgtt cagacggcat ctgtttcaag cagccgcgac aaacagcccg
     1741 acggtgcagg caaatccgcc cgcccacatc agcgagcgca atgctgcttt gtctgcgatg
     1801 tagcaccaga taaaggcgag gcggaacagg atgaacaggc cggcaagcgt gttgacggtt
     1861 gcttgtccgg cattgccggt tgcgtgtgcc gtcaaaacgg cggcggcaaa cggtgcaaag
     1921 gcttcaaaac cgttttgctg cgcggcgtgg gcacgggcgg ctgtgccttg cgtgcgcgcc
     1981 agaaaatcgc gcggattgtg gttgtcttta aaccggaatc cgcccgcttt tttggcatat
     2041 gccgcacaaa aaagcggcaa taagcaggca atcaggatgc accaataggc aaaagtcatg
     2101 ctttatcctt tcctaaacat attcaacatg cggcgcgtta cgaagaagcc gccgaagata
     2161 ttgatgctgg caatcaggat ggcgatgaag gcaagcaggg taacgaaacc gttgccttgg
     2221 ctgatttgca gcagcgcgcc gacgacgatg atgccggaga tggcgttggt taccgacatc
     2281 agcggtgtgt gcagcgagtg gctgacgttc caaacgacat agtagccgat gacgcaggcg
     2341 aggacgaaga cgataaagtg gttcaggaat gctgcgggtg cgaccgcgcc gacccacagt
     2401 accaacacgg cggcgatgac ggcgggcgcg agttttttcc acaggggaac gggtttcggt
     2461 tcgggcttgg cggcaggcgc ggctttttca gacggcgttt gctgcggttg ggcggaaact
     2521 tgaatcggcg gaggcgggaa ggtgatttcg ccgtcgcggg taacggtcat gttgcggata
     2581 atcacgtctt caaaatccag cgtgatttcg ccgtctttgt tcgggcttaa caacttggtc
     2641 aggttgacca ggttggtggc gtaaagctgg gaagactgtc cggcaaggcg gtttgccatg
     2701 tcggtgtagc cgatgatttt cacgccgttg ccggttacgg acaattcgcc cggtcgggtg
     2761 agttcgcagt tgccgcccgt cgccgccgcc aaatcgacga tgacggagcc ggatttcatg
     2821 ctttccacca tttctttggt aatcagcttg ggcgcgggtt tgcccggaat ggcggcggtg
     2881 gtgatgatga tgtccacgtc tttcgcctgc tcggcaaaga gcttcatctc ggcggcgata
     2941 aattcgtcgc tcatcacttt ggcatagccg tcgccgctgc cgcccgattc ttgcgggaag
     3001 tcgagtttca aaaacttgcc gcccatcgat tcgatttgtt ccgccacttc caagcgggta
     3061 tcgaacgcgc gcaccactgc gccgagcgag tttgccgtac cgatcgccgc caaacctgcc
     3121 acacctgcgc caatcaccaa aacctgcgcg ggcggcactt tgccggcggc ggtaatttga
     3181 ccggtgaaga aacggccgaa ggcgttggcg gcttcaatta cggcgcggta gccgctgatg
     3241 tttgccatcg aagacaaagc gtccaaagcc tgcgcgcgcg aaatgcgggg caccatatcc
     3301 atcgccagcg cgttcacttt cttggcgcgc aaggcttcga ccaaagcctc gttttggcgc
     3361 ggccacagga agctgacgat ggtttgacct tcgttcaaaa gcggcagttc ctgttcggac
     3421 ggcgcgttga ccttataaat caaagggcag acccaaaccg ccgctttgtc ggcaacggtt
     3481 gcgcctgctg tttggtaagc ggcatcgtcc aaacttgccg ccaaacctgc accgctttcg
     3541 acaacggttt caaagcccag tttgcccagc agggcgacgg tggcgggcgt gcaggcgacg
     3601 cgggtttcgc cggataatga ctcgcgtggg ataccgattt tcatctctga atcctttttc
     3661 gggtagttta tatgtatcgt gggttaaatt taaatcgggg cagggcggag caacgccgta
     3721 ccggtttaaa accgattcac ttcaaatgtt aatatatttt agataatccc cttataacga
     3781 attttcatca ggctggcaat agttgcggca ttttcccgtg ttgtccgaca catactgccg
     3841 tttgcgtttg aagtcatttt ccgattgcag tcccgcccgc cgtaacattc tttgccgttt
     3901 cactatataa tccgcatttt ttgagccgcc gttatgccgc acgccctcgt cctccaattt
     3961 ccctccgccg aaaccctgcc ttccgacttc ccctcacgcc tgcccgaacc tgattatgct
     4021 gatgaaaagc gtatgcgttt tatcgttgaa gaagggtttt ctttaagcga aaaagacgcg
     4081 gcgttacttg gcagccgtca aatcgaccac gccgtgttgt cggatatgga ttttggcgaa
     4141 ctcggtttga ttgtcagcga tatggattcg acgctgatta ccatcgaatg cgtcgatgaa
     4201 attgcggcag gcgtgggttt aaaagacaag gtagcggaaa ttaccgagcg ttcgatgcgc
     4261 ggagagttgg atttcgagca gtcgttgcgc agccgcgttg cgctgttggc gggattggac
     4321 gaacagattt tggcggacgt ttatgaaaac gttttgaagc tctcgcccgg tgcggaattc
     4381 ttgttggacg aatgcaaaag gcacgatgtg aaattcctgc tggtgtccgg cgggttcaca
     4441 ttttttaccg aaaggctgca acaacgactc ggcttcgaat accaacacgc caatgttttg
     4501 gaaattgaaa acggcaggtt gaccggtcgt ctgaaaggca gaatcatcga cgcgcaggca
     4561 aaggcggatt tattgcgcga ataccgcagc cgcctcggat tgcagccgca tcaggtgttg
     4621 gcgatgggcg acggtgcgaa cgatattccg atgctcaaag aagcgggcat aggcgtggct
     4681 taccgtgcca aaccgaaagc gcaggcagcc gccgatgcct gtatcaactt cggcggtttg
     4741 gagcgtgtac gcggcctgtt cggataggcg gataggaaac ggatgccgtc tgaaaggttt
     4801 tcagacggca tttgaacggc aggaacgaca gtgggacgca gaaaactttg gtttgccctg
     4861 gcagcagcgg gcgttatcgg cggtttggtc ggcattgtgc tgacggaact gatgcacttc
     4921 atacaacata cggcatacgg ttatggcacg gacggcgtgt ccatctcgtt ccgcgaaggt
     4981 gtggcacagg cttccggtat gcggcgcgtt gccgtgctga cgctgtgcgg cgcggtcgca
     5041 ggcagcggct ggtggttgct gaaacgtttc ggcaagccgc aaatcgaaat caaagccgcc
     5101 ttgaaacagc cgttgcaggg gctgccgttt ctgacgacgg ttttccatgt tctgctgcaa
     5161 atcataacgg tcggactcgg ttcaccgctc ggacgggaag tcgccccgcg tgaaatgact
     5221 gccgcgttcg cttttgccgg cggcaggcgg ttgggtttgg atgaagacga aatgcggctg
     5281 ctgattgctt gcgcttcggg tgcgggtttg gcggccgtgt ataacgtgcc gctcgcctcc
     5341 acacttttta tcctcgaagc catgctgggc gtgtggacgc agcaagccgt cgccgccgca
     5401 ttgctgactt ccgtcatcgc caccgccgtc gcgcgcatcg gcttaggcga cgtgcagcaa
     5461 tatcatcccg ccaaccttgc cgtaaacact tcattacttt ggttttccgc cgtcatcggc
     5521 ccgatactgg gcgcaaccgc cgtctttttc cagcgcaccg cccaaaaatt ccccttcatc
     5581 aagcgcgaca acatcaaaat cattcccttg gcagtctgca tgtttgcgct catcggcgtg
     5641 attgccgttt ggtttcccga aattttgggc aacggcaaag caggcaacca actgaccttt
     5701 ggcggtttga ccggttggca acacagcctt gagctgaccg ccgtcaaatg gctggttgtc
     5761 ttgatggcgt tggcggcagg cgcatacggc ggactgatta cgccgtctat gatgctcggc
     5821 agcaccattt cttttgcagc cgccgccgcg tggaacagcg ttttccccga aatgccgtct
     5881 ggaagcgcgg cagtcgtcgg agcggcggtg tttctcggcg tatcgctcaa aatgccgctg
     5941 accgccattg tgttcgtatt ggaactgacc tacgcgccgc tgtccctgct gctgcctttg
     6001 tgcatcggca tggcgggggc attgggaaca tcgggaaaaa tgggcttcaa ataaatgccg
     6061 acaaatgccg tctgaaaggt tttcagacgg catttctttg taaattgtca gcaatatctg
     6121 caaaaaccta ctgccaaaaa actagaaata gcggataata ccgccccgaa aaagttcccc
     6181 tttccccatc caactgtcag aaaaggaagc cccaatgtcc gtcatcaaac gcgccctgat
     6241 cagcctgtcc gacaaggcag gcgcggtcga atttgcccaa accctgacca agctcggtgt
     6301 cgaaatcctc tccaccggcg gcacggcgaa actgcttgcc gatgcgggcg ttcccgtgat
     6361 tgaagtcgcc gactataccg gcttccccga aatgctcgac ggccgcgtga aaacgctgca
     6421 tccgaaaatc cacggcggta ttttgggtcg gcgcgatttg ggcgaacacg tcgccaagat
     6481 ggaagaacac ggcatcggca atatcgacct tgtgtgcgtc aacctttatc ccttcgccgc
     6541 caccatcgcc aaaccaaact gcacactgga agacgcgatt gaaaacatcg acatcggcgg
     6601 cccgaccatg gtgcgttctg ccgcaaaaaa ctggaaacac gtcgccatcg ttaccgacac
     6661 cgccgacttc cccgccatcg ccgccgaact cgaagccaac aacggcgcgt tgagcgacaa
     6721 aacccgcttc aacctgtcgc gcaaagcgtt cagccacacc gcccaatacg acggcatgat
     6781 ttccaactac ctgacctcgc tttcagacga catcttgagc ggcacgcccg aaatcggtga
     6841 attcccgagc cagttcaacc aaagctggat taaagtgcaa gacatgcgct acggcgaaaa
     6901 cccgcatcag cgcgccgcgt tctaccgcga tattgacccc gccgcaggca gcctttccgc
     6961 ctacaaacaa ctgcaaggca aagaattgtc ttacaacaac atcgccgatg ccgatgccgc
     7021 atgggaagcc gtcaaatcct ttgacgcgcc agcctgcgtg atcgtcaaac acgccaatcc
     7081 gtgcggcgtc gccgttgcag ccgatacatt gaccgcctac aaactcgcct acgtcaccga
     7141 caccaccagc gcgttcggcg gcatcatcgc cttcaaccgc gaagtggacg gcgaaaccgt
     7201 caaacagatt accgacaacc agtttatgga agtcttgatg gcgccgaagt ttaccgccga
     7261 agccctcgaa atcgccgccg ccaagaaaaa cgtgcgcgta ttggaagtgc cgcttgaggc
     7321 aggcgcaaac cgcttcgaac tcaaacgcgt cggcggcgga ctgttggtac aaacgcccga
     7381 catctgccgc atcagccgcg ccgatttgaa agtcgtctcc aaacgccaac cgaccgagca
     7441 ggaatggaac gatttgctgt tcgtctggaa cgtcgcaaaa tacgtcaaat ccaacgccat
     7501 cgtgttcggc aaaggcggac aaacctacgg catcggtgca ggccaaatga gccgcgtgga
     7561 cagcacccgc atcaccgccc gcaaagcgca ggacgccaat ttcgacctca acggcgcgtg
     7621 tgccgcctcc gatgccttct tccccttccg cgacggcgtg gatgtgattg ccgaacaggg
     7681 cattaaagcc atcatccatc cggcaggttc gatgcgcgat caagaagtct tcgacgcggc
     7741 agacgaacac ggcattgcga tggtggtaac cggcatccgc cacttccgcc attaaggcag
     7801 atgaacaagg caatgccgtc tgaagggctt tcagacggca ttttgcgcta ttttgtgaag
     7861 gtagggatga cggttcgggt attcctgaca gggtggattt tcaaggtgtt gtatagggtg
     7921 taggaggatt cgtaaaaggt gggatgcagg gtgtgcttca gcccgctgca tcaaaaattt
     7981 ttggagaacc ggcgggagtc ggcggttttg gtttcggcgg ggacggtgga aatgggtaac
     8041 attgacggaa tcgacggaag cggtgggctg aagcccaccc ttgtatattg gaatcactgt
     8101 atcatagcaa caaaccgccc ggccgccacc cgcgcccacc caaggcacac aaccgttgcg
     8161 tagctcaggg agcggcaggg caacccatcg acacaaccgg acagttgccg gacaacacaa
     8221 ccgaatgcaa ggcaggttta tgatgagtac ccaataccat tacgcaggta tagtgaatta
     8281 aatctaaacc agtacagcgt tggttcgcct tagctcaaag agaacgattc tctaaggtgc
     8341 tgaagcacca agtgagtcgg ttccgtacta tccgtactgt ctgcggctcg ccg
//
LOCUS       DAWKOX010000083         8358 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.083, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000083 DAWKOX010000000
VERSION     DAWKOX010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8358
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.083"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            282..1451
                     /gene="prpF"
                     /locus_tag="WJK78_001270"
     CDS             282..1451
                     /gene="prpF"
                     /locus_tag="WJK78_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ7598197.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            1865..3064
                     /locus_tag="WJK78_001271"
     CDS             1865..3064
                     /locus_tag="WJK78_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ7598198.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSIVLSCLGERLTTPEAVI
                     TFSKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVACGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMDKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELVGIL"
     gene            3422..4042
                     /locus_tag="WJK78_001272"
     CDS             3422..4042
                     /locus_tag="WJK78_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ7598199.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNQGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKEVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(4169..4612)
                     /locus_tag="WJK78_001273"
     CDS             complement(4169..4612)
                     /locus_tag="WJK78_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ7598200.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            4786..5154
                     /locus_tag="WJK78_001274"
     CDS             4786..5154
                     /locus_tag="WJK78_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ7598201.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFA
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            5199..6353
                     /locus_tag="WJK78_001275"
     CDS             5199..6353
                     /locus_tag="WJK78_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ7598202.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(6410..7282)
                     /locus_tag="WJK78_001276"
     CDS             complement(6410..7282)
                     /locus_tag="WJK78_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ7598203.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATVPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALIENLWRAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            7367..8179
                     /locus_tag="WJK78_001277"
     CDS             7367..8179
                     /locus_tag="WJK78_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ7598204.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGEVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         1818 a         2298 c         2413 g         1829 t
ORIGIN      
        1 ttaatccact atactgtaaa tcgtcattcc cgcgcaggcg ggaatccaga aagtggaatt
       61 gaggaaacct ttttatccga tgagtttctg tgcggataaa tctggattcc cgcctgcgcg
      121 ggaatgacgg ggtttaataa tctgccgtat cacaacacag tagccgtaga ttggggcgaa
      181 ccccgacagt ttgcggaatc aaacggcttt ggtcggagtg gcagcctaat ccactataaa
      241 aatcgtgggc agagcccacg ctacataagg agaatctaga aatgccgcaa attaaaattc
      301 ccgccgttta ctaccgtggc ggtacatcaa aaggcgtgtt tttcaaacgt tccgacctgc
      361 ccgaggcggc gcgggaagcg ggaagcgcac gcgacaaaat cctcttgcgc gtactcggca
      421 gcccggatcc ctacggcaag cagatagacg gtttgggcaa cgccagctcg tccaccagca
      481 aggcggtgat tttggacaag tccgaacgcg ccgatcacga tgtcgattac cttttcgggc
      541 aagtttccat cgacaaacct tttgtcgatt ggagtggcaa ctgcggcaac ctcaccgccg
      601 ccgtgggcgc atttgccatc gagcaaggct tggtcgataa aggcaagatt ccttcagacg
      661 gcatctgcac agtcaaaatc tggcagaaaa acatcggcaa aaccattatt gcccatgtac
      721 cgatgcaaaa cggcgcagtt ttggaaacag gcgattttga gctcgacggc gtaacgttcc
      781 cggcagccga agtacaaatc gaatttcttg atccagccga cggcgaaggc agtatgttcc
      841 caaccggcaa tttggtcgat gaaattgatg tgccgaatat aggccgtttg aaagccacgc
      901 tcatcaacgc gggcattccg accgttttcc tgaatgccgc cgacttgggc tacacgggca
      961 aagagttgca agacgacatc aacaacgatg ccgcagcttt ggaaaaattc gagaaaatcc
     1021 gcgcttacgg tgcgctgaaa atgggtctaa tcagcgacgt atccgaagct gccgcccgcg
     1081 cgcacacgcc gaaagtcgcc ttcgtcgcgc ccgccgccga ttacaccgcc tccagtggca
     1141 aaaccgtgaa tgccgccgac atcgatttgc tggtacgcgc cctgagcatg ggcaaattgc
     1201 accacgcgat gatgggtacc gcctctgttg ccattgcgac cgccgccgcc gtgcccggta
     1261 cgctggtcaa ccttgccgca ggcggcggaa cgcgtaaaga agtgcgcttc gggcatcctt
     1321 ccggcacatt gcgcgtcggt gcagccgccg aatgtcagga cggacaatgg acggccacca
     1381 aagcggttat gagccgcagc gcacgcgtga tgatggaagg ttgggtcagg gtgccggaag
     1441 attgttttta aattgacgta gcatgggttt gcccgcgagc cataaacagg tcgtctgaaa
     1501 aacaagtaaa catcaaatca ctgaccattc ctttcccttg ccctgtggcg gaaggcggca
     1561 aatcacaagg aagaacacgg aaaccccgat aaaagacagc ttcccgtatt accgtcattc
     1621 ccgcgcaggc gggaatctag acctgtcaat atggaggatt ggtaggggaa aacaggtttc
     1681 gtgagttcta cattctggat tcccgccaca gcctgtcctc gcgtaggcgg ggacggaata
     1741 acgatagaaa atgcggcata cgctttgccc aaagaggccg tctgaaacac cttgcgcctg
     1801 atgtctgcct ttttcagacg accccacacc aaaaaaacaa ccacaaacta caaggagaaa
     1861 catcatgtcc gaccaactca tcctcgttct gaactgcggc agttcatcgc tcaaaggcgc
     1921 cgttatcgac cgcaaaagcg gcagcatcgt cctaagctgc ctcggcgaac gcctgaccac
     1981 gcccgaagcc gtcattacgt tcagcaaaga cggcaacaaa cgccaagttc ccctgagcgg
     2041 ccgaaattgc cacgccggcg cggtgggtat gcttttgaac gaactggaaa aacacggtct
     2101 gcacgaccgc atcaaagcca tcggccaccg catcgcccac ggcggcgaaa aatacagcga
     2161 gtctgttttg atcgaccagg ccgtaatgga cgaactcaat gcctgcattc cgcttgcgcc
     2221 gctgcacaac cccgccaaca tcagcggcat cctcgccgcg caggaacatt tccccggtct
     2281 gcccaatgtc ggcgtgatgg atacttcgtt ccaccaaacc atgccggagc gtgcctacac
     2341 ttatgccgtg ccgcgcgagt tgcgtaaaaa atacgctttc cgccgctacg gtttccacgg
     2401 caccagtatg cgttacgttg cccctgaagc cgcacgcatc ttgggcaaac ctctggaaga
     2461 catccgcatg attattgccc acttaggcaa cggcgcatcc attaccgcca tcaaaaacgg
     2521 caaatccgtc gataccagta tgggtttcac gccgatcgaa ggtttggtaa tgggtacacg
     2581 ttgcggcgac atcgatccgg gcgtatacag ctatctgact tcccacgccg ggatggatgt
     2641 tgcccaagtg gatgaaatgc tgaacaaaaa atcaggtttg ctcggtattt ccgaactttc
     2701 caacgactgc cgcaccctcg aaatcgccgc cgacgaaggc cacgaaggcg cgcgcctcgc
     2761 cctcgaagtc atgacctacc gcctcgccaa atacatcgct tcgatggctg tggcctgcgg
     2821 cggcgttgac gcactcgtgt tcaccggcgg tattggcgaa aactcacgta atatccgagc
     2881 taaaaccgtt tcctatcttg atttcttggg tctgcacatc gacactaaag ccaatatgga
     2941 caaacgctac ggcaattcgg gtattatcag cccgaccgat tcttctccgg ctgttttggt
     3001 tgtcccgacc aatgaagaac tgatgattgc ctgcgacact gccgaacttg tcggcatctt
     3061 gtagccaaaa aagggacgag tccgcacaat gccgtctgaa accccaaacg cccgattagg
     3121 ctgatgagga ttttagacgg cattgttcat ttttttgtta tcttgcattt ttgtgcggac
     3181 ggtggaattt catcctgtaa acataaatat ttgtcggaaa acagaaaccc tccgccgcca
     3241 tttctacgaa agcaggaaac cagcaacgca aagcgacagg gatttgttgg aaatgaccga
     3301 aaccgaacga accggattcc cgcctgcgcg ggaatgacgg gattttctgt ttttgtggaa
     3361 atgacgggat tttgaatttc gggcgtacaa tacggaaaac atgacgataa ggacacaaac
     3421 catggcacag tttttcgccg ttcatcccga caatccccaa gaacgcctca tcaagcaggc
     3481 ggttgaaatc gtcaatcaag gcggcgtggt ggtttatccg accgattcgt gttacgcctt
     3541 gggttgcaaa ctcggcgata aggcggcgat ggaacgcata ctctccatcc gcaaaatcga
     3601 tttgaaacac cacctgaccc tgatgtgcgc cgatttgagc gagttgggca cgtacgccaa
     3661 aattgacaac gtacagtttc gtcagcttaa agccgccacg cccgggcctt atacctttat
     3721 cttgcaggcg acgaaggaag tgccggcgcg cacgctgcac ccgaaacgca aaaccatcgg
     3781 gctgcgtatt cccgataatg ccattgcaca agccctgctg ggggaattgg gcgagccgct
     3841 tttaagctgc accctgatgc tgcccgaaga cggcgaacca ttgaccgatc cttatgaaat
     3901 ccgcgagcgt ttggaacacg ccgtcgattt ggtgattgac ggcggctggt gcggaaccga
     3961 gccgaccacc gtcgtcgata tgaccgacgg cacggaattg gtgcgccaag gttgcggcga
     4021 tacggcggtg ttcggtttgt agggaaaccg atgccgtctg aagcatcggc tgttcagacg
     4081 gcattgcgcg ccttgccggc ggcagtccga aatgccggcg cgtatcgcgc tcggtcggaa
     4141 tatccgtttg aaacggcatt ttgatgcatt actgcaccgc aatcggaatt ctcggttcgt
     4201 agagcaggtc gtaggtcggc ttgttgagca ggtcttggag cgtgaaaccg tccagatacg
     4261 tgaaaaatga cttcatcgcg ccgccgagta tgcccgtcag ccggcaggac ggtgtaatca
     4321 ggcattcgtt gttctcgccc atgcactcga ccagctgcat cggttcgagg tggcggacaa
     4381 ccgagccgat gttgatgcgg tcgggcggtg cggcaagccg cagaccgccg ccttttccgc
     4441 gcacactgtg gaggaagccg cctttgacca gcgcggtaac gaccttcatc agatggcttt
     4501 tggaaatgcc gtaggttacg gcgatggtac tgatgttgac cagcgcatcg tcgttgatgg
     4561 cagtgtagat aaggacgcgc agcccgtagt ccgtatgttg tgtcaaatac atgattttct
     4621 cggtatggat cgttattctt atcggtacgg tttaagtttc acggaaaata ccttaatggt
     4681 tgaaaccctg tccgtcgggg cggtagaatg cagcctgtct gcggcggtat gccgtctgaa
     4741 acatccgcgc taccgtttga taatttgtta ttgtaactca aaatcatgaa accgttgaaa
     4801 cgacatcccg cccttatcgg gctttcgcgt gaccaccacc attcgctttc cctgtgcgtg
     4861 cgtctgttgc ggacgccgga agaaaggcat cgggacgaac tcgaaccgca ttttgccgaa
     4921 ttggaaaccc attttcgcga agaagaagcc aagtttgccc caatttggca gaatgtcgcc
     4981 cccgaattga aacaacgttt cgagaaagac cacgcccgac tgcggcagat gatggcaagc
     5041 cccgaatacg gtaacgcggc gtggaatacc gcttttgcca caaccctgcg cgaccacgcg
     5101 cgctttgaag aacgcgagct gtttcccgcc gccgaaccgt ttttgccggc atgattccgt
     5161 tttgcggcaa atatattaat gataaacaag gaacacacat gaaatttacc aagcaccccg
     5221 tctgggcaat ggcgttccgc ccgttttatt cgctggcggc tctgtacggc gcattgtccg
     5281 tattgctgtg gggtttcggc tacacgggaa cgcacgagct gtccggtttc tattggcacg
     5341 cgcatgagat gatttggggt tatgccggac tggtcgtcgt cgccttcctg ctgaccgccg
     5401 tcgccacttg gacggggcag ccgcccacgc ggggcggcgt tctggtcggc ttgactatct
     5461 tttggctggc tgcgcggatt gccgccttta tcccgggttg gggtgcgtcg gcaagcggca
     5521 tactcggtac gctgtttttc tggtacggcg cggtgtgcat ggctttgccc gttatccgtt
     5581 cacagaatca acgcaactat gttgccgtgt tcgcgctgtt cgtcttgggc ggcacgcatg
     5641 cggcgttcca cgtccagctg cacaacggca acctaggcgg actcttgagc ggattacagt
     5701 cgggcttggt gatggtgtcg ggttttatcg gtctgattgg tacgcggatt atttcgtttt
     5761 ttacgtccaa acggttgaat gtgccgcaga ttcccagtcc gaaatgggtg gcgcaggctt
     5821 cgctgtggct gcccatgctg accgccatgc tgatggcgca cggcgtgatg ccttggctgt
     5881 cggcggcttt cgcgtttgcg gcaggcgtga tctttaccgt gcaggtgtac cgctggtggt
     5941 ataaacccgt gttgaaagag ccgatgctgt ggattctgtt tgccggctat ctgtttaccg
     6001 gattggggct gattgcggtc ggcgcgtctt atttcaaacc cgctttcctc aatctgggtg
     6061 tgcatctgat cggggtcggc ggtatcggcg tgctgacttt gggcatgatg gcgcgtaccg
     6121 cgctcggtca tacgggcaat ccgatttatc cgccgcccaa agccgttccc gttgcgtttt
     6181 ggctgatgat ggcggcaacc gccgtccgta tggttgccgt attttcttcc ggcactgcct
     6241 acacgcacag catacgcacc tcttcggttt tgtttgcact cgcgcttttg gtgtatgcgt
     6301 ggaagtatat tccttggctg attcgtccgc gttcggacgg caggcccggt tgagacaaac
     6361 cgccgcagat ttcgggtctg ggcggtttgc ttttcagacg gcagggcggt cagttgccgt
     6421 ccagccagcg gtcgcgtgtg gttttggctt cttcaaaata gcggtacagg gcttcgcggt
     6481 cgtcggtggt caggatgttt gccaaaacgt ccaactgttt gcccaagcct tgaaccagtt
     6541 gcagcaggct gtctttgttg gcaaggcaga tgtccgccca cacggcggga tgaccggagg
     6601 cgatgcgggt gaagtcccga aagcccgtgg cggcgaattt cagatattcc tgtccgtcgg
     6661 ggtggtcgag aatctggtgg acataggcga aggcggtcag gtggggcata tgggagacgg
     6721 cggcgaaaac cgcgtcgtgg cgttgcgcgt ccatcgtata aatttccgcc ccgaccgcgc
     6781 gccacaggtt ttctatcaag gcaatgccgt ctgaatgttc gccgccgtgt ggcgtgatga
     6841 tgagttttct gtggcggaac agcccgaact gcgcggcttg cgcaccgctt ctgtccgaac
     6901 cggcaatcgg gtgggcggcg atgcagcggt gcaggcggtc gggcagacag cggcggaagg
     6961 cttcgatgac cgaagatttg gtgctgccga catcggaaat ccaagtgtgt tccggcaaaa
     7021 cggggcgcag cgcggtcaaa atggcgggaa cggtggcgac gggcgtggca atcagtacca
     7081 agtccgcacc gccgatgctg tccgcgtcga tggcaacgga agcccggtca atcacgccgc
     7141 gttccaatgc acgttcgagg ttgtcgcggt cggtgtcgat accggtaacg gtgcggacga
     7201 gtccctgcct tttgaggtcg agaacgaacg aaccgccgat cagccctaca ccgatgaggg
     7261 caatatggtt caaaatgggc atttgtgtaa acggttttcg caaagtaccg tcatggtagc
     7321 ctatcggcgg aatatgccgc aaggtcggca ggaaaaagga gaagaaatgg acaaaatcag
     7381 agttgccgcc gtgcagatgg tgtcgggcgt gtcgccggaa accaacgtcg ccgccatgaa
     7441 acgcctggtc gcacgggcgg cggagcaggg tgcggattgg gtgctgctgc ccgaatattg
     7501 ggtgctgatg ggcgcaaacg ataccgacaa actcgcgctt gccgagcctt tgggcggcgg
     7561 acgctttcag acggcattga gcgaaacggc gaaagaatgc ggcgtggtgc tgtttggcgg
     7621 aaccgtgccg ctgcaaagcc ccgaggcggg caaggtcatg aatactttat tggtgtacgg
     7681 gcgcgacggc aaacggacgg ggctgtacca caaaatgcac ctcttcggct tttccggttt
     7741 gggcgaacgc tatgccgaag ccgataccat ccgcgcgggc ggggaagtgc cgcacttgtc
     7801 ggcagaaggc gtgccggtgg cggcaggtat ttgttacgat gtccgctttc ccgaattttt
     7861 ccgccgccag ctgccgtttg acgtattgat gctgcccgct gcgtttacgc acacgacggg
     7921 caaggcgcat tgggagctgc tgctgcgcgc gcgtgccgtc gaaaaccaat gttacgtcgt
     7981 ggcggcggca cagggcggtt tgcacgaaaa cggacggcgc acgttcggac acagcatgat
     8041 tgtcgatccg tggggcgacg tgttggacgt attgcccgaa ggcgaaggcg ttgttacggc
     8101 agacatcgat gccaaccgcc tgaacagcgt ccgcaaccgc ctgcccgcct tgaaataccg
     8161 ggttttggat gccgtctgaa ggttcagacg gcatcggtgc cggggaatca gcgggctgta
     8221 ggatgggctt cagcctgcca tttccatcaa tcccacattt ctaccgtttt catcgaatcc
     8281 atcgaatccg cccctttcga cgccccagtc ctacgcaact gaaccgtcat tcccacggaa
     8341 gtgggaatct agaatctc
//
LOCUS       DAWKOX010000084         8096 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.084, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000084 DAWKOX010000000
VERSION     DAWKOX010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8096
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.084"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..573
                     /locus_tag="WJK78_001278"
     CDS             <1..573
                     /locus_tag="WJK78_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224706.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HEZ7598205.1"
                     /translation="DLGKLSPEAQLAAASLLQDSAFAVKDGINSARQWADAHPNITAT
                     AQTALAVAEAAGTVWRGKKVELNPTKWDWVKNNGYKTPAARPMQTLDGEMAGGNKPVV
                     KSIRPTTRDELRQALQEQGFRRTGSDEAQYETWKGPDGVKIDIRPNGEVIRTQRVPRT
                     DGVQGKYPQRQNYEGNPLPNNRHHSGYFIK"
     gene            570..887
                     /locus_tag="WJK78_001279"
     CDS             570..887
                     /locus_tag="WJK78_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598206.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            957..1697
                     /locus_tag="WJK78_001280"
                     /pseudo
     CDS             957..1697
                     /locus_tag="WJK78_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            1701..2102
                     /locus_tag="WJK78_001281"
     CDS             1701..2102
                     /locus_tag="WJK78_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598207.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            2261..2603
                     /locus_tag="WJK78_001282"
                     /pseudo
     CDS             2261..2603
                     /locus_tag="WJK78_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            2743..3099
                     /locus_tag="WJK78_001283"
     CDS             2743..3099
                     /locus_tag="WJK78_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ7598208.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNKKTVIFHF"
     gene            3272..3646
                     /locus_tag="WJK78_001284"
     CDS             3272..3646
                     /locus_tag="WJK78_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598209.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVTYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNPRVIVINLDN
                     IENHEFFNSFEDWLELAIKDTW"
     gene            complement(3684..3946)
                     /locus_tag="WJK78_001285"
                     /pseudo
     CDS             complement(3684..3946)
                     /locus_tag="WJK78_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(4602..5588)
                     /locus_tag="WJK78_001286"
     CDS             complement(4602..5588)
                     /locus_tag="WJK78_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ7598210.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            complement(5628..6428)
                     /locus_tag="WJK78_001287"
     CDS             complement(5628..6428)
                     /locus_tag="WJK78_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ7598211.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALDLPVVRHPEAAKFIEG
                     ITQKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLNTYYADRFNQTERGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            6553..7896
                     /gene="argG"
                     /locus_tag="WJK78_001288"
     CDS             6553..7896
                     /gene="argG"
                     /locus_tag="WJK78_001288"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ7598212.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIEPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKK"
     gene            7971..>8096
                     /locus_tag="WJK78_001289"
     CDS             7971..>8096
                     /locus_tag="WJK78_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ7598213.1"
                     /translation="MKEYKVVIYQESLLSSLFFGATKVNPVNFSAFLNKQTPEGWR"
BASE COUNT         2332 a         1759 c         1839 g         2166 t
ORIGIN      
        1 gatttaggaa aattaagtcc ggaagcacaa cttgctgccg cgagcctatt acaggacagt
       61 gcttttgcgg taaaagacgg catcaattcc gccagacaat gggctgatgc ccatccgaac
      121 attacagcta ctgcccaaac tgcccttgcc gtagcagagg ccgcaggtac ggtttggaga
      181 ggtaaaaaag tagaacttaa cccgactaaa tgggattggg ttaaaaataa cggctataaa
      241 acacctgctg cccgccctat gcagacgttg gacggtgaga tggcaggagg aaacaagcca
      301 gttgttaaat ctatcagacc aactacgcga gatgaattac gtcaagcatt gcaagaacaa
      361 ggttttagac gtactggttc agatgaggct caatatgaaa catggaaagg tcctgatggc
      421 gtgaaaatag atattcgtcc aaatggagag gttataagaa cccaaagagt gccgcgaacc
      481 gatggtgtac agggaaaata tccgcaacga caaaattatg aaggcaatcc attgccaaat
      541 aatcgtcatc attctggata ttttatcaaa tgaaaaaaaa tatttttcac aatgtaagcc
      601 tttatgaaat aatcttttcc gataatggaa atacccttac attatctttt acagatacaa
      661 ttgaaggtaa ttatttcgga tatatcaaat gcagtaatat tttgaatttt aaattagata
      721 caaataattt cgtagattat gaggataagg aagatagctt gtttcccttg tttatacccg
      781 aaatagagct atataaatac caattttata gtgaaattat tattgatgta gggattatta
      841 taaaaatatc tgctgaaaca attaattttg agccactggg aaaatagtaa ctgctttccc
      901 agcagccgta gcaactgtat ttttacccga cggggtaaaa atacagttgc tacatctctg
      961 cgcagcagac tctacaaggt attaataatt taggaaaatt aagcccggaa gcacaacttg
     1021 ctgccgcgag catattacag gacagtgctt ttgcggtaaa agacggcatc aattccgcca
     1081 gacaatgggc tgatgcccat ccgaatataa cagcaacagc ccaaactgcc cttgccgtag
     1141 cagaggccgc aggtacggtt tggagaggta aaaaagtaga acttaacccg accaaatggg
     1201 attgggttaa aaataccggc tataaaaaac ctgctgttcg ccatatgcag actaaggcgt
     1261 taggtacggt agatgaaatt ggcgatacag tacagcaggt tgggaaacag gctagcggac
     1321 aaaaaaccag cggtggtaat cctgcgattg atagcgaccc ctatagcccg agtagtgtgg
     1381 cagctcgcat agaaaccggt aaggtgcgca gtgatttaca aatcaaagac attttgagca
     1441 atactactca aaggagtaaa acaaaaggtc ccgctgttca gtatgataaa gtgggggatt
     1501 acaatgacgc actaaatgat tttaatagtc tgaatgttcg aaatgtacaa acacgtccta
     1561 atggaacgat aacgggcaat ttacctgata ggcgtgcggt taatgctcgt aatgatagta
     1621 gtggtggaga accaacactt gaaataacaa ttagtaataa ccgaaaaata aaaatcagat
     1681 atggaaatac acgataaatt atgaaattaa aaagcttaga tttcccaact ggctatttct
     1741 attttgataa tgcagcaata aactctgata aagtagaagt tatagcagtt ggttatagaa
     1801 atacggataa aaccataaaa atttttattg aagatgttat tcattttagg gttgttgatg
     1861 aatcgtattt tatagatact tttatggatt taatttcgga agatgcagat agagctttgc
     1921 ttcatgaaaa tggtggtcaa tctttttttg aacttcttga tgagtgttat gcggaatgga
     1981 tattgaaaga aagttatttt cctttgaata gagaattctt taaatactat atttttatgt
     2041 ttgagcaaac attcatagaa ataattggtt ctagtgcaac gtattcaatt attgagggct
     2101 agcgtaagat gagtaataag ttgcctatct ttctttcagg cagcctgaaa ataaaactac
     2161 ccaagttgat ggtgtacctg tatcagtgaa gggaaatttt gttgatggta aatttcgcat
     2221 tggtacggca acaatgaaat cattttaaat tgagctagaa atgaacctag aaaattatga
     2281 aaacatttta ataaaattac ttttttatca taacaactta gtaaatgaat attcttattt
     2341 tattgaaaat aaaaatttat ttaaaatagt atctcgaact aaaacgagta agggcttttt
     2401 ttcactatag aaaaaccatt aaattttcta agcaaaaaaa cttattttga gtttaatttt
     2461 aaatatttac actcagggaa agaacgcttt ggttcgttta tgtgctggat aaatactaat
     2521 ttaatggaat ttgagggggt ttttttaacg acctgctccc tgataatatg ataataaata
     2581 acttttttga aataaatgat taacgataca ccaataaaaa ttggtggggt aaccgtatgg
     2641 atgatattcg cggcatcatc caaggtgcgg ttaatccttt aatttacaag gtaagcaagc
     2701 aaaagattat ttacaacaaa ctcatatcag gaacttagac aaatgaatga acacaacctg
     2761 ttaattttct gtttaaaaga caatgtttca attagtgaat atactgaaat gattgattgg
     2821 gcttataaaa atattcaatc tgaaacagtt gtagaaatta cggaaagtca aattattgaa
     2881 tatcaaaatc gtggattatg gagacttgtt tctgaaatta ccgataattg gttatttgga
     2941 ccaagtgagg gggattggct aatagataag gaaagtattt tggctgtaaa agaaaaatta
     3001 caaaattcag atttttctac agagccctta gtgaaaaata ttattcatgt acttgaatat
     3061 gctataaaaa ataaaaaaac agtaattttt catttttgag actaatccaa tttttagtaa
     3121 tattgatgca gagcaagcag cattagatgc cgcaaacatg gggagaagct attcaattta
     3181 gaattaaaaa acaaattgaa aatgaactag caccaccaaa ttggtctacc cagtttccta
     3241 atggtagtat ttatgatcct aaggtaacga aatgattatt caaaatgaat ttaatttata
     3301 tcctagtaat atgcttcctg aaaggttttg ttatcctgaa aagtatgttc gtatctctaa
     3361 cgatacatct ttaatacctt atattcagcc acataatttt cactggtggt ttgagaatta
     3421 tggaacagaa ggggcagaag taacttatat atttagaaat tctatcctgc ctgatttaaa
     3481 tcttatccca ttcgctagta atggagaatg ggaagcttat tttgatggta atgatgtaac
     3541 aggaaatcct agggttattg tcattaattt agataatata gaaaaccatg aattttttaa
     3601 tagttttgaa gattggcttg aattagcaat taaggatact tggtaagcag ctatctataa
     3661 agagatgagg ctgccctgga caactaggat aaactcgatt ttactaattg ttttaaaatg
     3721 gaacaagaac ttttatctca ctgttgttaa aacgccattc gcactccttt aaatacagct
     3781 caaaatgcgc tttgggaatg ccgttaaact tgcgtaaatg acgttttgcc tggttccaaa
     3841 agttctcagt tccattaata tggttttgtc gttcggcaaa atgtgtgctg tgattgatac
     3901 ggaaatggct aaattcgccc gcatccaata catcatagcc acgataacaa aatgagttta
     3961 ttttgtttat accggcttag acgactttct ctcataggga taattctaac ttaatttgaa
     4021 tttccctagt gatctagggc agcccctaaa ttaataaagc agcacaactc cttttgccga
     4081 tgttccggac tgtcaaacga ctgttcctca tgccacatct ccatcaaggt acggataacc
     4141 cgctccgcct taccgttggt ctgcggacaa gcaaatcggg caagcctcca accaatccca
     4201 ttattataac aagctgcacc gaaagcatgt tggacggctc tttatattac ctatcattgt
     4261 cagagtaaac gtactcaatc aggtacaagc aggggtcagc cagatgttcg gtcagaaact
     4321 tggcagcact gtctgcggtt ttgtccggca aaatggcaga gtataaaaat cgtcaatagc
     4381 gacaaacagg taatctcgtt tatcggcggc cttctgtcct ttgagcaaca acaaccgatc
     4441 ggtatcagga tgaacaaaac ctcccgggac aacctgcctt ttacggcttt aagtgcacgg
     4501 taaatagtga cgcggctgac ttagtggcag catactgggg aggtgagtgt ttttgtgtat
     4561 atttttattt tggtattccc ttagaaatac tgtaaacaac gctaccggac ggcctgcagg
     4621 gcttcgcgca cgcttgcttt gagttctgcg ccgaagcgtc tgcccaagat tctgccgaaa
     4681 tcgtccttcg gagtgtaatc caccacatcg ggggctttga ccacgtctcg cgccacgctg
     4741 taaatattgc cgagtccgtc caccagcccg actttcagcg catccgcgcc tgtgtacacg
     4801 cgaccgctga acacgtcggg atattgtcgg aatttgaggc ggtcgccgcg tccggttttg
     4861 acggctttga tgaactcgcc gtgtatgccg gtcagcattt cttcccagat tttcgactgt
     4921 tcgggcgttt cgggcgaaaa cggatcgccc atgcctttgt tgctgcctgc aattttaacc
     4981 ctgcgtttca cgccgatttt ttccatcagg ccggtcgcgt cgaaactgct gccgataacg
     5041 ccgatgctgc cgatgatgct ggacgggtcg gcatagattt tgtccgccgc cgccgcgatg
     5101 tagtagcagc cggacgcgca catatcttcc gccacgagat aaacgggaat gccgggatgt
     5161 tgcgctttca gacggcgtat ttcctcaaag gcagtattgg atacgacggg agagccgccc
     5221 ggactgttgg cgcggatgat gatggctttt gcctgcgggt ttttgtaggc ggcctccata
     5281 ccgtctttga gttttttgac ctggtcttct acaccgttgc cgatttcgcc gtacaggttg
     5341 acgactgcgg tatgcggcgt attgcccgcc aactgcaatg cggcttcgtc ttttcggaaa
     5401 atgcctgcaa tcagggcaac cagaatcagg gtgctgacgg cgcgccagat gtttttccac
     5461 atccgctccc tgcgcctgtc ctgataggcg gacagcagca cttcgcgcat gatgtcgcgc
     5521 tcccataagg tttcccccgc attttttgct tcgggtgctt cgttttctct tctgattcgg
     5581 tattgcatgg ttttccttaa atattgtccg atttgggcaa acggttttca gtttacccga
     5641 tttttcagct ctgctcccaa tccgtccaag ctgtgcaaca cttccgccca cgccgcgtcc
     5701 aaaaggttga cggcttctcc ttcggctttg atgccgaact caatgtgcgg tttgacctgc
     5761 gtgccgtctg aatgcgtcca accgacgctg ggcaggctgt acgaacgcac accgggataa
     5821 gtttgctcga tatgctccat aagcggcgta atgcgcgatt cgggctgctc aaacacatac
     5881 acgctgcggc tgccgcgttc ggtttggttg aagcggtcgg cgtaataagt attcaaaacc
     5941 cattccgcca tcgggtgcgc catcacagga aagccgggga agaaataatg ctcgcggatg
     6001 gaaaatccgg cgatgttgtt gaacgggttg ggcacaagct ctgcgccctc ggggaaatcc
     6061 gccattttca ggcgttgggc gtgttccggc gaatcaagcg gctcgccgcg tttctgggtt
     6121 atgccttcga taaacttggc ggcttcagga tggcggacga caggcaaatc caaagcagca
     6181 gccgcggctt ggcgcgtgtg gtcgtcgggc gtggcgccga tgccgccggt aacaaacgtc
     6241 ggtatgccgt ctgaaaagct gcggcgcagt tgcctgacca gtaaatcggg ttcgtcgggt
     6301 agatattgca cctgattgag cttcagccct ttggattcga gcagggattt gaaaaaggcg
     6361 aaatgcttgt cttggcggct gccgtgcagg atttcgtcgc cgatgatgat gaggttgaac
     6421 gcgttcataa tgttttcggt tttaaatacc gcctgaaacg gcggaatacc cgttcagaca
     6481 gcatgatggc tgacaatatt tcctatttat aagataatgg ctttgatttt tcaagctacc
     6541 gaggattttt tcatgaacca aaaccatact attttacaaa atctccccgt cggtcagaaa
     6601 gtcggcatcg ccttctccgg cggacttgat acctccgccg cgctgttgtg gatgaaactc
     6661 aaaggcgcgc tgccttatgc ctacactgcc aacctcggcc agcccgacga agacgattac
     6721 aacgccattc ctaaaaaagc gatggaatac ggcgcggaaa acgcccgctt aatcgactgc
     6781 cgcgcgcagt tggcacatga aggcatcgcc gccatccaat gcggcgcgtt ccacgtttcc
     6841 accggcggca tcgcctattt caacaccacg cctctgggcc gcgccgtgac cggcaccatg
     6901 ctcgtttccg caatgaaaga agacgatgtg aatatttggg gcgacggcag cacctacaaa
     6961 ggcaacgaca tcgagcgttt ctaccgctac ggtttgctca ccaatcccgc gctgaaaatc
     7021 tacaaaccct ggctcgatca gcaatttatc gacgaactcg gcggccgtca cgaaatgagc
     7081 gaatttctga ttgccaacgg cttcaactac aaaatgtcgg tggaaaaagc ctactccacc
     7141 gattccaata tgttgggtgc cacccacgaa gccaaagact tggaattttt gaactcgggc
     7201 atcaaaatcg tcaaacccat tatgggcgtt gccttttggg acgaaaacgt cgaaatcgaa
     7261 cccgaagaag tcagcgtacg ctttgaagaa ggcgtgccgg ttgcactgaa cggcaaagaa
     7321 tacgctgatc ccgtcgaact cttcctcgaa gccaaccgca tcggcggccg ccacggtctg
     7381 ggtatgagcg accaaatcga aaaccgcatc atcgaagcca aatcgcgcgg catctacgaa
     7441 gccccgggaa tggcgttgtt ccacatcgcc tacgaacgct tggtaaccgg catccacaac
     7501 gaggacacca tcgaacaata ccgcatcaac ggcctgcgcc tcggacgttt gctctaccaa
     7561 ggccgctggt tcgacagcca agccctgatg ttgcgcgaaa ccgcccaacg ctgggtcgct
     7621 aaagccgtta ccggcgaagt taccctcgaa ctgcggcgcg gcaacgacta ctcgattctg
     7681 aacaccgaat cgcccaatct gacctaccaa cccgaacgcc tgagtatgga aaaagtcgaa
     7741 ggtgcggcgt ttaccccgct agaccgcatc ggacagctca cgatgcgcaa ccttgacatc
     7801 accgacaccc gcgccaaact gggtatctac tcgcaaagcg gtttgctctc gctgggcgaa
     7861 ggctcggtat tgccgcagtt gggcaataag aaataaggtt tgctgttttg catcattagc
     7921 aacttaaggg gtcgtctgaa aagatgatcc cttatgttaa aaggaatcct atgaaagaat
     7981 acaaagtcgt catttatcag gaaagcctgt tgtccagcct gtttttcggc gcgacaaagg
     8041 tcaaccccgt caatttcagc gcgttcctca acaaacaaac ccccgaaggc tggcgg
//
LOCUS       DAWKOX010000085         7993 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.085, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000085 DAWKOX010000000
VERSION     DAWKOX010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7993
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.085"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(263..2953)
                     /gene="glnE"
                     /locus_tag="WJK78_001290"
     CDS             complement(263..2953)
                     /gene="glnE"
                     /locus_tag="WJK78_001290"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ7598214.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNGIKSLVRPFVFRKYLDYGAYEAMRKLHRQISS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKLAETGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQQQLLAESMGFDSYAAFSDDL
                     NAHRTKVNQLFNEILSEPEEQTLDTSEWQWAWQEKPDEEGRRCRLKAHGFDAETVAAR
                     LDQIRHGHKYRHLSAHAQPRFDAVVPLFVQAAAEQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRRFQHTQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEMLTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCSLIDKNLAEQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVTGELLAHYGNVRKLWRDVFGEEAATA"
     gene            complement(3151..3486)
                     /locus_tag="WJK78_001291"
     CDS             complement(3151..3486)
                     /locus_tag="WJK78_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598215.1"
                     /translation="MPSEALSGLQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WNGVAKAAKAVGEGMIEAGNEHKALKMEYAEKSSEELHEIVKSDGFFKNSTREKSAAY
                     AILKERGEV"
     gene            complement(3500..3973)
                     /locus_tag="WJK78_001292"
     CDS             complement(3500..3973)
                     /locus_tag="WJK78_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ7598216.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(4026..4307)
                     /locus_tag="WJK78_001293"
     CDS             complement(4026..4307)
                     /locus_tag="WJK78_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598217.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            complement(4394..4717)
                     /locus_tag="WJK78_001294"
     CDS             complement(4394..4717)
                     /locus_tag="WJK78_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598218.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            complement(5051..6058)
                     /locus_tag="WJK78_001295"
     CDS             complement(5051..6058)
                     /locus_tag="WJK78_001295"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ7598219.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNMVYKLGLIPVTGNRTKPV
                     KLMGLDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPNPQPGNPQPRLFRVPE
                     YQGIINRMGFNNHGIDAMIQNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVHGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAAEKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     Q"
     gene            6290..6526
                     /gene="acpP"
                     /locus_tag="WJK78_001296"
     CDS             6290..6526
                     /gene="acpP"
                     /locus_tag="WJK78_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ7598220.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            6682..7929
                     /gene="fabF"
                     /locus_tag="WJK78_001297"
     CDS             6682..7929
                     /gene="fabF"
                     /locus_tag="WJK78_001297"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ7598221.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
BASE COUNT         1846 a         2129 c         2064 g         1954 t
ORIGIN      
        1 tagaatgcgc tattttaatg gaaacggcgg ggttttaaac ggttcttatt tgtttgtttt
       61 gatttttgct tgggtaaaaa atcccatcat tcccacaaaa acagaagcct gaaatcccgt
      121 cattcccgcg aaagaggaat ccggtttttg ggtttcagcc attcccgata aatcgcttta
      181 gctctgccgc aaccttaaaa cggcacggta cgaaaatacc gtctgaaacc cagattgtca
      241 ggcttcagac ggcatttttt gttcaggcgg ttgccgcttc ttcgccgaac acgtcccgcc
      301 acaatttcct gacattgccg taatgtgcca acagttcgcc ggttacttcg gtttttgccg
      361 cgtcgcgcag tttggtgttg tgctgctgcc ggcggtagaa gcggtaggcg gtgcggcttt
      421 gttcggcgag gtttttgtcg ataaggctgc agtcggcggc gatgtttaag agggcgatgt
      481 tgccgtagtt gtccaagagt tgcggatact ggcgggcatg ggcaagtatc agatattgga
      541 cgataaattc gacatcgacc acgccaccgc gcgcgtattt gacgttgctg tcggcaggcg
      601 gatgggtggg gaacattttt tcgcgcattt cgataatttc gcctgctaag gcggtttggt
      661 cgcgttcggc agtcagcatt tcggtgcgga tgcggtcgaa ggccgtctga atttcgggtg
      721 tgccgcagat gaagcgggcg cgggtgaggg attggtgttc ccacgtccag gcgttttcgc
      781 gctggtattt ttcaaaggcg gcgatgctgt gggcgaggaa accggcgtcg ccattagggc
      841 gcaggcgcag gtcggtttcg tagaggctgc ctgcgccggt ggcggcggaa agccagttgg
      901 tcaggcgacg ggcgaggcgg ctgtacacgt cgcctgcgtc ggggtgggga tcgtcgtaga
      961 gatagacgag gtcgaggtcg gaggcgtagc cgagttcttt gccgccgagt ttgccgtaac
     1021 caacgacggc gaattgcggg gtgtcgcggt gttttttggg catgtccgcc cacgcgcaca
     1081 gcagggcggc ggcgaggatg gtgtcggcga gggcggagag ttggtcggag agggattcta
     1141 ccgtccacag tccggcgagg tcttggacgg cgagacggaa gacttgggtg tgctggaagc
     1201 ggcgcagggt gtccatttgc gcttcagtat cgccgccgca ggctttgagg tcgtctgaaa
     1261 gggcggcggc gagtgcctgc caatcaaacg cggtatccaa aagctgcgcg ctgatgagtt
     1321 cgtccaacaa aatcggatat ttgttcagat acgccgccac ccaagaactt tggcccataa
     1381 tctgcgccag ttgcgccaag gtttgcggat gttcgttgag gaaggcgaga taggcggatc
     1441 ggcggctgat gttttcgaga aaatccaaca gccgcatcaa tgtatcggtc gggttgcttt
     1501 gctctgccgc cgcctgtacg aacagcggca caaccgcatc gaaacgcggc tgggcgtgtg
     1561 cggaaagatg gcggtattta tggccgtggc ggatttggtc gagccttgcg gcgacggttt
     1621 cggcatcgaa cccgtgcgcc ttcagacggc atcgccgccc ttcttcgtcg ggcttttcct
     1681 gccatgccca ttgccattcg ctggtgtcta gggtttgctc ttcgggttcg ctcaaaattt
     1741 cgttgaacaa ctgattgact ttggtgcggt gggcattgag gtcgtctgaa aaagcggcgt
     1801 agctgtcgaa acccatactt tcggcaagca gttgctgctg ttcgggcgaa gccggcaggg
     1861 tttgggtttg ccggtcatcc cagtattgca ggcggtgttc gacatcgcgc aggaatcggt
     1921 aggcggcaag cagggtttcg acgttttcag acggcatgat cccggtttcg gcaagtttct
     1981 tcagcgtttc ctgcgtgcct ttcagttgca gcgcacgcat ttggccgccg cgtatcatct
     2041 ggaaaatctg ggcgataaat tcgacttcgc ggatgccgcc cgcgccgagc ttgatgttgt
     2101 ccgccatgcc ttttttgctg acttcgctgc tgatttggcg gtgcagctta cgcatcgcct
     2161 catacgcgcc gtaatccaga tatttgcgga acacgaaggg gcgcaccagc gatttgattc
     2221 cgttcggata cggcgtaacc acgcggcctt tgcaccacgc gtagcgttcc cattcgcgcc
     2281 cctgcgtaat caggtattgc tccagcgcgg tttcgctcaa caccaacgcg cccgaatcac
     2341 cgtccggccg cagccgcata tcgacgcgga acacctgccc gtcggcggtg atgtcgttca
     2401 acagcgcaat cagtttctgc ccgactttgg tgaaaaactc ctgattgccg cgttcgcgcc
     2461 tgccgtcggt gtcgcccgat tcgggataga cgaaaatcaa atcgatgtcg gaagacacgt
     2521 tcaactcata gccgcccgcc ttgcccatcg ccaccacgct caaatgctgc ggcgatttgg
     2581 tataacgccc gatcggcgtg ccgtacatgt cccgataata ggcgtaggca aaatccagcg
     2641 cggtattgac ggcaaaatcg gcaaacagcg taatcgtgcg ggttacttcg ttcaaatcgc
     2701 tgatgcggtt tatatcgcgc acgataatct gcgacaccac ataacggcgc aacccgcgca
     2761 actgccgcgc caattcttcc tcgttttctt ccgcacggat tttgtcccag tcggcaaagg
     2821 cttggaaatc cgcttcggtc aaaaccttgt ccagcatagg caggaaaatt tcgggcttga
     2881 gtttgccgtt gtcgagctgg cgggcgagga agagggaatg gcggcgggcg gtgtcgaggc
     2941 ggttgtcgga catttcggat tccgtttgaa aaaatggcag gaagatgatg gcggattcac
     3001 ttcaaatcag gacagggcga ggggatgccg taccggttta aagtcaagcc actatatcat
     3061 agcaaccttc gatgccgtct gaaaccttgc cccgacatcc agacggatgc ctgccgataa
     3121 aaaacagcgg caaatgccgc cgtttcctgt tcacacctcg ccacgctctt ttaaaatagc
     3181 ataagccgca cttttctccc gtgtggaatt tttaaaaaaa ccatcactct tgacgatttc
     3241 atgcagctcc tcacttgatt tctccgcata ttccattttc aacgccttat gctcattgcc
     3301 ggcttcaatc attccctctc ccactgcttt tgctgctttt gccacaccat tccaaaaacc
     3361 cataatcatg tcctccaatc gtttcaaata aataaggtcg ttgtttctgt caagaaacaa
     3421 cgacagttta taaactgtcg gaaaacaaaa tgccgtctga aggccggata atgcttcaga
     3481 cggcatcgga ttgccggttt taaccctgcc ctccgccgtt gttcaaatag tgttcccagt
     3541 gagaatataa ccgggcaata ttttcttcat aggtgtgggc agaaggaata taaccgtctt
     3601 tgggcggcat atacctgaca aatgattcta tttcttccgg ataatcaaaa tctgcataaa
     3661 ttttttcaac ttcccccaaa ggatcctcaa attcttcttt tctatggaat acatcgctta
     3721 agaggacgta cagccaattt ttaggggaat aatccctcat ttccgaagcc aaatcttcca
     3781 gaacaggctt taattcaaga atattggatt tgttgattaa agatagtttg aacacacgtt
     3841 catcatgatc tgaaagcgtc atttttcggg cataagctgc cacatcagcc caacccaagt
     3901 atttattccc atacccccac agaatatcct tccaagaaag acggactttt tgcgcggtta
     3961 aatcaaggtt cattttttac tccgattgcc tgccccgtca ttccgcccct tccgattgac
     4021 gcctgttacg aaaagtcttc caaatgacgg ctgattgcct cttcaacagt cggatgccaa
     4081 tccataaatg aagcctgcaa ttcctctaaa accaactcat tgaataaatc atccaaattc
     4141 cgccaatccg ttttttcatc cggatagatg aaatttgcca taacgacagt atgtttgttt
     4201 tgggaataat ccgataaggc gcaaatcatc agataccgcc ccgaatgctc cagataaaaa
     4261 attcgttttt ccaaaggaaa ccggttattc cgttgcccgt tttccatttt tcatcctttt
     4321 taacgtatcg gcttccgcgt ccttcaaatt gagttacctg ccttccgcca agcaaacgcc
     4381 cgcgcccctt tcatcatttg aatatccgtt tgaccatatt taccagataa ctatcttctt
     4441 tatataaatc aatcagcaaa ggcacgatac ccggctcata aaataattct gtcgtatcag
     4501 atgtttcttt taacgcggaa attatctcca acagttcata cccgtatcgg ggataagcaa
     4561 acaaataggg gactgcttcc cgcaaacatg aaaatgcttc gtaactttgc atttcccata
     4621 tatgttcatc tttaaaatca ctcaaatacc attcatccaa ttcactttcc ggatcggata
     4681 tcaatcggat aaattcattt agttcgtcct taaacatatc aaatccttaa atataaaatc
     4741 ttttgattat ccgccgtatc cttattttcc acatcatgaa tttcaacgcc gttcatattt
     4801 tgcgttttct caaaccgtcc accacggcat aaaattattt tttcatatca attatttata
     4861 tgtttaacaa cttaccgccg gacttgcttt ggctgcgtat caagattgtc cggttcgcgg
     4921 cgggcgtttg ctttgtttca aacagggcgg cgcgtaaggg attttcaaag ggcggcaggc
     4981 aggaaaagga aataaaaatg ccgtctgaac ggcaaaacgt gcgttcagac ggcattttgt
     5041 gcgggacgcg tcattgcgcc aaagccttca aacattcttt gaccaatgcc ggacctttgt
     5101 atatcaatcc gctgtacacc tggacggcag ttgcgcccaa gcggattttc tctgccgcgt
     5161 ccctgccttc cataatgccg cctacgccga taatcggcag cttgccgtcg atgtggtctg
     5221 ccaacagctt caacacccga ttactttttt catgaacggg cagcccgctc aaaccgccct
     5281 gctcgcctgc gagcggatgg ctgccgagac ttgatttgtc gatggtggta ttggtagcga
     5341 tgatgccgtc catttcgacg gatttgacaa cgtgggcgat gtcttcgatt tgtgcttcat
     5401 ccaaatcggg ggcgattttg acggcgagcg ggacgtattt cccgtgtaca gaggcaagct
     5461 gtgcctgttt gtttttcaaa gcctcaagca atgcgctcaa ctcgtcgcca ccttgcagcg
     5521 cgcggaggtt tttagtgttg ggcgaggaaa tattgacggt aatgtaactt gcgtgtgcgt
     5581 aggctttttc gaggcagatt aaataatcat cggcagcgtt ttcaatcggt gttacagcgt
     5641 ttttgccgat gttgatgccc aatacgccgc tgaatttact tttttcgatg ttttgaatca
     5701 tggcatcgat gccgtggttg ttgaagccca tgcgattgat gatgccttga tattcgggaa
     5761 cgcggaagag gcgcggctgc gggttgccgg gctgcgggtt gggcgttacc gtgccgattt
     5821 cgatgaaacc gaagccgagc gcgcccaatg cgtctatata ttcgccgttt ttatcgagtc
     5881 cggcggcaag cccgacaggg ttgggcaaat ccaaacccat cagttttaca ggtttggtac
     5941 ggttgccggt tacgggaatc agacccaatt tataaaccat gttgagcgcg tcgagcgtga
     6001 agtggtgggc tttctcggca tcgagtgcaa acaggatgcg gcgggcaagt ggatacatga
     6061 cagggctttc tgcttcagat ggaaatgccg tcattttaac cgaaatcccg tcaaacatac
     6121 ggcacacagg tcaaacttga acgacaaaac ccgccgcacc caaaaatgta caaatcggca
     6181 aatattgata taatagtcat tagatagaaa actctattaa aagtcggtac aataccaccg
     6241 atttatttcc cttaaacaac ctgccgcaag gcataaagga acgactgata tgtcaaacat
     6301 cgaacaacaa gttaaaaaaa ttgttgctga acaactgggc gtaaacgaag ccgacgtgaa
     6361 aaacgaatct tctttccaag acgacttggg cgcggattct ttggacaccg tggagctggt
     6421 tatggctttg gaagaagcat tcggctgcga aatccccgac gaagatgccg aaaaaatcac
     6481 caccgtccaa ctggctatcg actacatcaa tgcccacaac ggctaaccgg tcgtcgcccg
     6541 acacaacagc ctctgctgca ccgcgcaata gaggcttttc ccttatatgg caaactgttt
     6601 gaacccctgc cgcaaattac agacggcatc tgcacgacag ccgcatatgc ccccattccg
     6661 acaaccaaca gcgaggttat catgagtcag agaagagtag tcattacagg cttaggtcag
     6721 gtttcccctg tcggcaacac tgtcgcagag gcttgggaca ccctgctcgc cggcaaaagc
     6781 ggcatcggcg cgattacccg ctttgacgca tccgacatca acagccgtgt cgccggcgaa
     6841 gtgcgcggtt tcgacatcgg acaatacatc agcgcgaaag aagcgcgccg gatggacgta
     6901 ttcatccact acggcattgc cgccgcattg caggcaatcg ccgattcggg cttggacgat
     6961 gtggaaaacc tcgacaaaga ccgcatcggc gtgaacatcg gttccggcat cggcggactg
     7021 cccagcatcg aggtcaccgg caaagccgta atcgaaggcg gcgcgcgcaa aatcaaccct
     7081 ttctttatcc ccggttcgct gatcaacctg atttccggac acgttaccat cctcaaaggc
     7141 taccgcggcc cgagctacgg gatggtttcc gcctgtacca ccggcgcgca cgccatcggc
     7201 aattccgccc gactgatcaa atacggcgac gcggacataa tggttgccgg cggcgcggaa
     7261 ggcgcaatca gcactttggg cgtgggcggt tttgccgcga tgaaagccct ctccacccgc
     7321 aacgacgacc ccgccaccgc ttcccgtccg tgggacaaag gccgcgacgg cttcgttatc
     7381 ggcgaaggcg cgggcatatt ggtgttggaa gaattggaac acgccaaaaa acgcggcgcg
     7441 aaaatctacg ccgaaatcgt cggcttcggc atgagttccg atgcttacca tatcaccgcg
     7501 ccgaacgaag aaggccccgc ccttgccgtt acccgcgcgc tgaaagatgc cggcatcaat
     7561 cccgaagacg tggattacgt caacgcgcac ggcacgtcca cccccttggg cgatgccaac
     7621 gaaaccaaag ccctcaaacg cgcgttcggc gaacacgcct acaaaaccgt cgtcagctcg
     7681 accaaatcca tgaccggcca cctgctcggc gcggcgggcg gcgtggaggc cgtgtacagc
     7741 attttggcga tacacgacgg caaaatcccg ccgaccatca acatttttga acaagacgtt
     7801 gaagccggct gcgatttgga ctactgcgcc aacgaagcgc gcgacgcgga aatcgacgtt
     7861 gccatttcca actccttcgg cttcggcggc accaacggca cgctggtctt caaacgcttc
     7921 aaaggctgat tccgcaaagc cgccgccgac atcgaaatgc cgtctgaaac cgtttcagac
     7981 ggcattttta tag
//
LOCUS       DAWKOX010000086         7926 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.086, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000086 DAWKOX010000000
VERSION     DAWKOX010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7926
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.086"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(168..1964)
                     /locus_tag="WJK78_001298"
     CDS             complement(168..1964)
                     /locus_tag="WJK78_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ7598222.1"
                     /translation="MNTVSNYLSALREAMRAQGLDALVIPSADPHLSEYLPAHWQARR
                     ELSGFTGSVGTFVLTTDEAGVWVDSRYWEQAAKQLSGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIEHPNDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPSAEQKSDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2422..3675
                     /locus_tag="WJK78_001299"
     CDS             2422..3675
                     /locus_tag="WJK78_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ7598223.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCIISATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3830..5341
                     /gene="lysS"
                     /locus_tag="WJK78_001300"
     CDS             3830..5341
                     /gene="lysS"
                     /locus_tag="WJK78_001300"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ7598224.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5418..5606)
                     /locus_tag="WJK78_001301"
     CDS             complement(5418..5606)
                     /locus_tag="WJK78_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEZ7598225.1"
                     /translation="MDGWYDFRFQNVVYAPDRSPEISRMLSSILAGYAWDTENPFVAK
                     SEQRLTALSEWVGQLESE"
     gene            complement(5610..6488)
                     /locus_tag="WJK78_001302"
     CDS             complement(5610..6488)
                     /locus_tag="WJK78_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ7598226.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLVVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEAFDLPEGSTILGVVLEVKKRF
                     MSAAQARRRVDSDYHP"
     gene            complement(6518..7645)
                     /locus_tag="WJK78_001303"
     CDS             complement(6518..7645)
                     /locus_tag="WJK78_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7598227.1"
                     /translation="MSNWKPNIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVAKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     DIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1722 a         1985 c         2217 g         2002 t
ORIGIN      
        1 agtgaatcgg ttccgtacta ttcgtactgt ctgcggcttc gtcgccttgt cctgattttt
       61 gttaatccac tatatttgct tgcggcaaga tgaaaacggt gcgggatgtt ttgggaaacc
      121 aatgccgtct gaagggcttt cagacggcat tttttgcgcc gtgctgttta acgcgccagc
      181 ggttcggtgc gtttgatcag ccacgctttt gccgcgcctt cggtcagcgg ctcgaggcgg
      241 cggcggactt cggcgtggta gcggttgacc cagtcgattt cgccgtcggt catgagggcg
      301 gtgtccatca ggcgggtgtc gatggggcag agggtcaggg tttcaaaaca gaggaagctg
      361 ccgaattcgg tttcttgagg ggcggcgacg gcttggttgg cggcaaggtt ttcaatgcgg
      421 atgccccatt ttcctgggcg gtagagtccg ggttcgatgg aggtaaccat gccttttttc
      481 atggcggttt cgggcgtggc gggggcggcg aaggcgatgc gctgcgggcc ttcgtggacg
      541 ttgaggaaat agcctacgcc gtgtccggtg ccgtggccgt agtcgcattg cgcctgccac
      601 aggggtttgc ggcaaatcgc atcaatcagc ggcgagggga tgttttcggg gaatacggct
      661 tcggcaagcg cgatatgggc tttgagaacg agggtgttgt cgcttttttg ttcggcactc
      721 ggcgtgccga cggggacgac gcgggtgatg tcggtcgtgc cgcctttgta ttgcgcgccg
      781 gagtcgatga gcaaaagccc gttgccgctg atggtgctgt ggctttcggg tgtcgcgctg
      841 taatgcggca gtgcgccgtt ggcgttgaag cctgcgatgg tgtcgaaact caatgaaatg
      901 aagcccgggc gcacgctgcg gtggcgataa agcatggtgt ccacgtcgat ttcggtcagg
      961 ctgccgccgt tgccgatgat gtcttcaaac tcggcgaaga aaccgcacaa cgccgcgccg
     1021 tcgtgttcca tcgcttcgcg gatgcgggcg atgtcggctt cggatttgca ggatttgaac
     1081 agcgtggatg ggttgattcc ctcgataagg cgcacgcttt cgggcaggcg cacaagcgtg
     1141 ctgacggcgg ttttgttcgg ttcgataagc agcgcgccgc cgatttgcgc gagtttgtcg
     1201 gcaacttggg cataaggttc gaccgtgatg cctgcggttt gcagcgcggc ggcggcttcg
     1261 gcgttcagac ggcatcggtc ggtaaacagg acggcgttgt ctttgccaat cagcaggaag
     1321 gacacgaaaa cagggttgaa aggtacgtcg ctgccacgca ggttggtcag ccaagcgatg
     1381 tcgtcaagcg aggaaaccaa gtggtaatcc gcgccttttt ccgccatcac ggcgcgcacg
     1441 cgggcgagtt tttcggcggc ggtttcggag acgtaggcgg ggtcgtggat gaacacggtt
     1501 tcggcaggaa tggccgggcg gcttgtccac acttggtcaa gcagatcgtt tgggtgttcg
     1561 atgcggatat ttttggcggc gagtgattgc gccaaagtgc gtttgccggt gagcgagacc
     1621 atatcggaag ggatgccgac ggcggcgttt tcgggcaggt ttgccgcgag ccattcgttg
     1681 tacggcggca cttgaccgct tttttgcagc tcgatgccgc tgccggaaag ctgtttggcg
     1741 gcttgttccc aatagcggct gtccacccat acacccgctt catcggtggt caggacaaat
     1801 gtgccgaccg agccggtaaa gcccgacaat tcgcggcgcg cctgccagtg tgcgggcagg
     1861 tattcggaca ggtgggggtc ggcggaaggg atgacgagtg cgtccaagcc ttgcgccctc
     1921 atggcttcgc gcaatgcgga caggtaattc gatacggtat tcataacagt tcctccaatc
     1981 gggttttgcg gcttcagacg gcatggacgg aaatctgaaa tgccgtctga aaaacataac
     2041 catcttatca aatcgccagc ctgctgcaaa acggacgggc tgatcggatg gtgcgtgttt
     2101 gcgcgaaaaa agcgatgtaa ggttgtttgt tgtaaaattt taggcataaa atgtcgtttc
     2161 atgccttttt ttggaagtaa tatggaaaat atagtcaagt ttgagcatga agttctaata
     2221 gtgtgtgttg gcaggtattt ggattacgtt acaatacgcg ctttcatcaa aatttcccta
     2281 ccgagcggta tcctgttttt gaagacggta ggatttgggt ttgtttgggg gcaatcccgc
     2341 ccaaattgga gcaatagata gggctgtgtc cgaatatgcg gctctgtgtg ttgaaacacg
     2401 gttaaaaata cggaagactt tatgtccgaa caacatattt cgacttggaa aagtaaaatc
     2461 aacgcattgg gtccggggat catgatggct tcggcggcgg tcggcggttc gcacctgatt
     2521 gcctcgacgc aggcgggcgc gctttacggc tggcagatcg cgctcatcat catcctgacc
     2581 aacctcttca aatacccgtt tttccgcttc agcgcgcatt acacgctgga cacgggcaag
     2641 agcctgattg aaggttatgc cgagaaaagc cgtgtttatt tgtgggtttt cctgattttg
     2701 tgcatcattt ccgccacgat taacgctggc gcggtcgcca tcgtaaccgc cgccatcgtc
     2761 aaaatggcga ttccctcgct gatgtttgat gccggcacgg ttgccgcctt gattatggca
     2821 tcctgcctga ttattttggt gagcggacgt taccgcgctt tggatcgcgt ttccaaaatc
     2881 atcatcgtta ctttgagtat cgccacgctt gccgccgccg gcatcgctat gtcgcgcggt
     2941 atgcagatgc agcccgattt tatcgagccg acaccgtgga cgcttgccgg tttgggcttc
     3001 ctgatcgcgc tgatgggctg gatgcccgcg ccgattgaaa tttccgccat taattctttg
     3061 tgggtaaccg aaaaacaacg catcaatcct tccgaatacc gcgacgggat ttttgatttc
     3121 aacgtcggtt atatcgccag tgcggttttg gctttggttt tccttgcact gggtgcgttt
     3181 gtgcaatacg gcaacggcga agcagtgcag atggcgggcg gcaaatatat cgggcaattg
     3241 atcaatatgt acgccgttac catcggcggc tggtcgcgcc cgctggtggc gtttatcgcg
     3301 tttgcctgta tgtacggcac gacgattacc gttgtggacg gctatgcccg tgccattgcc
     3361 gaacccgtgc gcctgctgcg cggaaaagac aaaacgggca acgccgaatt ctttgcctgg
     3421 aatatttggg tggcgggcag cggtttggcg gtgatttttt ggtttgacgg cgtaatggcg
     3481 aatctgctca aatttgcgat gattgccgct tttgtgtccg cccccgtgtt cgcttggctg
     3541 aattaccgtt tggtcaaagg tgatgaaaaa cacaaactca catcaggtat gaatgccctt
     3601 gcattggcag gcttgattta tctgaccggt tttaccgttt tgttcttatt gaatttggcg
     3661 ggaatgttca aatgataacg atgccgtctg aaaccgcaaa ccgctttcag acggcattgt
     3721 cgcgtttatg gaaaaaaatg ccgacatcgc gtaaaatatg cgcaaatttt gtgattcggt
     3781 caggtcgtct gaaacagatt gcgcctgatt tattttttcg gaaaacccta tgagcgaaca
     3841 aaaccatccg caaaccgagc cgcagttgga cgaaaaccaa atcatcgccc tgcgccgcga
     3901 aaaactgcac aacatccgcc aacagcgcaa cgcctatccc aacgacttca aacgcgacag
     3961 cttcgccgcc gatttgcacg cccaatacgg cgaaatcggc aaagaagaac tcgatccgca
     4021 aggcattccc gtcaaagtgg ccggccgcat gatgctgaag cgtcaaatgg gcaaggcgag
     4081 ctttgccacc attcaagacg tgtccgggca aatccagctt tatctgaaca acaaaggcgt
     4141 gagccaagaa gttttggacg acttcaacca ttgggatttg ggcgacatcg tcggcgcgga
     4201 aggcactttg ttcaaaacca accacggcga actgaccgta cgcgtgtccg acatccgcct
     4261 gttgtccaaa tccttgcgtc cgctgccgga caaacacaaa ggcttgagcg atcaggaaac
     4321 caaataccgc caacgctatg tcgatttgat tgccaacgaa gaatcgcgca atacctttat
     4381 caaacgcagc caaatcatcc aatccgtgcg taattttatg gtgggcgagc attatctcga
     4441 agtcgaaacc ccgatgatgc acccgattcc cggcggcgcg acggcaaaac ccttcgttac
     4501 tcatcacaat gccttagata ttccgcttta cctgcgtatc gcgcctgagc tgtatttgaa
     4561 acgcctggtt gtcggcggct tggaacgcgt gtttgaaatc aaccgcagct tccgcaacga
     4621 aggcatgtcc gtgcgccaca accccgaatt tacgatgatt gaattttacg aagccttctc
     4681 cgactacgaa cgtatgatgc agatggcgga agacatcatc cgcaacgcat cgcgcacagt
     4741 aaacggtacg gcaaacatca cttacaatgg caaagaagtc gatttggaaa gcccgttcga
     4801 gcgtctgacc atcctcgaag ccatcaaaaa atacaatccg cactacaccg acgagcagtt
     4861 gaacgatgcg gaatggctga aaaaagaaat cgtcaaacac ggtgaaagcc tgccgccgtc
     4921 cccgggcatc ggcagcctgc aactcgcgct gtttgaaggt tgcgccgagg gcaagctgtg
     4981 gaacccgact ttcatcatcg attacccggt cgaagtttcc ccgttggcgc gcgcttcgga
     5041 taccaaacaa ggtctgaccg aacgtttcga attgttcgtt gtcggccgcg aactggcaaa
     5101 cggctattca gaattgaatg accctgaaga ccaagccgaa cgcttcaaat cgcaagtcgc
     5161 acaaaaagac gcgggcgacg acgaagccat gcattacgat gccgactaca tccgcgcgat
     5221 ggaatttggt ttgccgccga ccggcggttg cggcatcggt atcgaccgct tggtgatgtt
     5281 gctgaccgat tcgcaaacca tccgcgatgt gattctgttt ccgcagatgc gccccgagta
     5341 gtcataaaaa cagttgaaat ggcaatgccg tctgaacccg attggattca gacggcattt
     5401 tgtatggcgg tacggattta ttcgctttct aactgaccga cccattcgga caaggcagtc
     5461 aggcgttgtt cggatttcgc cacgaacggg ttttcggtat cccacgcgta gcctgccaaa
     5521 atcgaagaaa gcatacggct gatttccggg ctgcggtcgg gcgcgtacac gacgttttgg
     5581 aagcggaaat cgtaccaacc gtccacacat caggggtggt aatccgaatc aacacgcctt
     5641 ctcgcctgtg cggcggacat aaaccgtttt ttgacctcca gcaccacacc taaaatcgtg
     5701 ctgccttcgg gcaggtcaaa ggcttcagac ggcctgcccg tctgataaat cagcatcctg
     5761 cccgcaatat cgataacaag gtgcgcgacg accagccgct tgtcggacag ttcaatcagc
     5821 acgatgtcct cgtccgcagg gcgcatacgc ggctcgacca ccaccaaatc ccctttttcg
     5881 ataaccggcg acatggacgt gtcgggcatg gcaacggcaa acgtgtactg cgagggggcg
     5941 accaccgaag caaacaagtc gaaactgcct gtgagtttgc ctgtacgggc gaaagccgcc
     6001 gcctgacggt ctgacaacag ggggcgtggt gtgagcctca tcgacagtgc tttgccgtcg
     6061 gcatcgctgt ggttgtgcgt atgcgtatga tggttgttga tggtcgtatc gccttggaca
     6121 tcgttaagga ctatgctgtt tgaacctgcc acggatttgg tcatctcatt gtaggcttgc
     6181 gtcgtgatgc gctcttgctt ggtcatacct gttacagcct gtttcagcat ttctaacgct
     6241 atgtgattct tcctaagggt cgctataccg gcttttgcag cttgctcatt accacaagag
     6301 gggcaacccc agctacttcc tatgaacata ttggagtacc tcgaacaggt ttggtttcca
     6361 tgtttagggc agttgattac acacggcttg gctgtaccct caaactcgac caacttaatg
     6421 ccacgatgac cgaaacgttc ctcaacctca gcagcagctt cttcaaatgt ttttgacctt
     6481 cttgccatat tgacctccgg attattgatt attttggcta tgctttaacg agggattgga
     6541 atgaggtaaa gctgttgccc tctccccgca atagttccat taggcgcgga tgaatgaata
     6601 gtttgtccct gccgatggcg atttcttgca gcacacctat gtctgaaagc tctttcaggt
     6661 acttagaggc cgtctgccgt ttggctatcc ctgccgcttc taggttggca atgcgtgtat
     6721 atggctgctc aaacagaaga tttaccagtt cgtgcgtgta gattccttgt gcgtgtgtcc
     6781 gtatgtgttg acgtgtctgc tcaaacaggc ggcgtatcgc atctattttc gctaccgtcc
     6841 aatcggcggt gtcggctacg ccgtctaaga tgtagattat ccagctttcc cagtcctgcc
     6901 gttcggttac gcctaaaagc aggcggtaat agtccgccct gttttcgatg atgtagcggc
     6961 tcaaatacaa aataggcaaa tccaaaagcc ctttttcaat caatagcagg ctgttcaata
     7021 tgcgccccgt ccgcccgttg ccgtccgtaa acggatggat ggcttcaaat tggtaatgtg
     7081 ccgccgccat gatgataagc gggtctaaat cgccgctttc gtgaataaac cgctcccaat
     7141 ttgccagctt gccgcgtatg gtttcttctc cttcgggcgg ggtatagaca acatttccgc
     7201 tgttgcctcc ttttagggct gtgccgcctg ttttgcggat ggccatttcg taggggtgct
     7261 tgatggcgtt gcagaccatg atggcggttt gtgtgcataa agggcggctc gtcagtgatt
     7321 catagcctgc aaacagggcg gtgcggtatt gcagggcttc tttcgtggca gggtcttgcc
     7381 gttccgtatc catttgcagg gattgaaaca gcttatccgt tgtggttacg atgttttcaa
     7441 tttccgaact tgcacgggct tccataacag gaagggtgtt aatcagcatg gcttgattcg
     7501 gtatcagttc tgccgcctgc tttaaacggg caagggatgc acgggcggct atacaacgtt
     7561 tcaggatggt tttgctttca atatcctgtt ttggcggcag gggtggtaaa tcgttatagg
     7621 gaatattggg tttccagttg ctcatattta aaatttcgga aaatttaaag atgtttccag
     7681 tatatgttta cgccgtgtat atatcaagga tatatgttta aaaatttggc ttttgtaaat
     7741 atatgggcgg taaaaccgca ttattttatg ttgttaccta ttttacacct tgtctgcaca
     7801 cgatttccaa acaacctaaa aagaaacctg ccgaaagaca ggtttaaaga ggtcatttta
     7861 aatgtgaact aaagtttaca ccctcggagg gtatcgcgta tatcagacgt acttaatata
     7921 cactat
//
LOCUS       DAWKOX010000087         7923 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.087, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000087 DAWKOX010000000
VERSION     DAWKOX010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7923
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.087"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            331..1644
                     /locus_tag="WJK78_001304"
     CDS             331..1644
                     /locus_tag="WJK78_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ7598228.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILMPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            1865..2022
                     /locus_tag="WJK78_001305"
                     /pseudo
     CDS             1865..2022
                     /locus_tag="WJK78_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
     gene            2035..3285
                     /locus_tag="WJK78_001306"
     CDS             2035..3285
                     /locus_tag="WJK78_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ7598229.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTERGRIAV
                     MQESEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(3320..4813)
                     /gene="rng"
                     /locus_tag="WJK78_001307"
     CDS             complement(3320..4813)
                     /gene="rng"
                     /locus_tag="WJK78_001307"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ7598230.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAASNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            5026..5283
                     /gene="grxC"
                     /locus_tag="WJK78_001308"
     CDS             5026..5283
                     /gene="grxC"
                     /locus_tag="WJK78_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ7598231.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5304..5747
                     /gene="secB"
                     /locus_tag="WJK78_001309"
     CDS             5304..5747
                     /gene="secB"
                     /locus_tag="WJK78_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ7598232.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSSTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            5833..7875
                     /gene="recG"
                     /locus_tag="WJK78_001310"
     CDS             5833..7875
                     /gene="recG"
                     /locus_tag="WJK78_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ7598233.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLQHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRVSGTAAALGGDGTLTQALRHALPFALTDAQEKVVSEICRDM
                     AQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGLEVVWLSGSQRKKAKDEAKAKLADGTVKIAVGTHALFSDDVEFQNLGLVIVDEQH
                     RFGVAQRLALKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV"
BASE COUNT         1668 a         2051 c         2341 g         1863 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta taaaatccca cgtgtacggc acgccccgcg
       61 ctccgcaatg ataggggcgg tttcgtttga atcggcgtac cgggatgaat gcccccgcgc
      121 cgtcccgata ccggtttgcc ggttgttccg tatcggttgc cgccgtgaaa tgacggacgg
      181 atacaggaat ggcggcaggc gtaaatggga ggaaatgacc gattgacttg tttcaaaata
      241 aaaaagtaga atgcaaggct tatcccgcgt ctgtgggcgg ttttgcctgc acggtcggtt
      301 ttctgtttaa aataaaataa aggagaaatg atgctgacgt ttatcggact gctgattatc
      361 ggggtcatcg tatggttgct gctgacggaa aaagtgtcgc ccatcatcgc attaatcttg
      421 atgccgctgt ttggggcgtt gctggcgggg tttgatgtat cccaattaaa agaattttat
      481 tcgggcggca ccaaatcggt gatgcagatt gtgattatgt ttatgttttc cattttgttt
      541 tttggaatca tgaacgatgt ggggctgttc cgtccgatga taggcggttt gattaagctg
      601 actcggggta atatcgtggc agtgagtgtg gggacggtct tggtgtcggt ggtggcgcag
      661 ttggacgggg cgggtgcgac gacgttttta ttggtcgtcc ccgccctttt gccgctttac
      721 aagcgtctgc atatgaatcc ttacctgctg tttttgctgc tgacttccag tgcgggattg
      781 attaaccttc tgccgtgggg cgggccgact gggcgggttg caagcgtgtt gggcgcagat
      841 gtgggcgaat tgtataaacc tttgttgacg gtgcaaatta tcggtgtagt gtttatcctt
      901 gcgctgtccc tgcttttggg tgtgcgtgaa aaaaggcgga ttgtccggga gttgggcgcg
      961 ttgcccgccg tggcggattt gataaagccg gtgcctttgt cggaagaaga acaaaaattg
     1021 gcgcgtccga aactgttttg gtggaatgtc ctgctgtttt tggcggcgat gagcctgctt
     1081 ttttcgggca tcttcccgcc gggttatgta tttatgctgg ctgcaacggc ggcgttgctt
     1141 ttgaattacc gcagcccgca ggaacagatg gagcggattt atgcccacgc cggcggcgcg
     1201 gtgatgatgg cgtccattat tttggcggca ggtacgtttt tggggatttt gaagggtgcg
     1261 gggatgttgg acgcgatttc caaagacatt gtgcatatcc tgccggacgc gctgctgcct
     1321 tatctgcata ttgccatcgg tgtgttgggc attccgcttg agttggtttt gagtacggac
     1381 gcttattatt tcggactgtt tccgattgtg gagcagatta cctcgcaggc gggcgtggcg
     1441 cccgaagcag caggttatgc gatgttgatc ggcagtatcg tcggcacttt tgttacgccg
     1501 ctttcgccgg ctttgtggat gggcttgggt ttggcgaaat tgtcgatggg caaacacatc
     1561 cgttattcgt ttttttgggc gtggggtttg tcgctggcga tattggccag ttcgatagcg
     1621 gcaggaatcg tgcctctgcc gtaaacggcg aagccgtctg aagcccgaat cgttcctgtg
     1681 gtctgtcgca ggctgcctgc ctgcccgtgt gttgcaatcg cgccccaatg ccgtctgaag
     1741 gcagttgccg gcgcggtttt tttgtgctgc agttttgaaa aataccggca agcgtaaagg
     1801 ccgctaaatt gcggctaatt ttggggtgtt agaataggca cggtttgtct gaaagggaaa
     1861 gttgatgcgt gttttgctgg tggaagacga tgcgatgatt gcggaggcgg tgtcggcaag
     1921 tttgaaagac ggcggctatg cggtggattg ggtcaaaaac ggcgcgcggc tgccgctgcc
     1981 cagccttatg acttgatgct gctggatttg ggtttgccgg ggcggacggt ttggatgttt
     2041 gttccgctgg caatgcttgc aggtatgttt tcctactacg aaaccttcca cgaaacggaa
     2101 gcgttgcagg acgacctgct ccgtcaggcg gcattgtacg tcgcccccga ttccaaaccc
     2161 gaaactttgc ccgagggcga cggcgatacg cgtattttgg tacagatgcc gcagcaggaa
     2221 gaccctgttg tcagcctgcc tgcgcatctg gcggacggtc tgcacacgct tcaggcggac
     2281 ggggacgacg attattaccg cgtctatatc cgcacgacgg agcgggggcg gattgccgtg
     2341 atgcaggaaa gcgaataccg ggaagatttg gcggcggatg cggcacggca aagcgtgttg
     2401 cccctgctgg cggcactgcc gctgatgata ctgctgaccg tgtggattac gcacaaagcc
     2461 atgcgccccg tccgcaaatt gtcgcaaagt ctcgaacaac gccgaatcaa tgacctgtct
     2521 gccttgagtg tggacaatat tcccagtgaa atcagagggt tcgtaaccgc catcaacttg
     2581 cttttgaaac gtgcggatga agacatccgc caccgtcagc ggtttgtcgc cgacgcggca
     2641 cacgaattgc gtacgccgat gacagccctt tcccttcagg cggaacggct caacaatatg
     2701 tctctgccac ccgatgcggc gcggcagtct gccgttttgc agcaaagcat acggcgcaac
     2761 aaacacctgc tcgagcagct tttggcactg gcgcgttcgc agtcggacga aacccctttg
     2821 gcgaaaacga cattcggtct gcaaagccgt ttccgccaag tgttgcagga actgatgccg
     2881 cttgccttgg aaaaacgtca ggacattggt gtggcggtcg gaggtgatgt cgaaatattt
     2941 gccgatgaaa ctgaaatcta taccttggtt aaaacgtttg ttgataacgc aatacgttat
     3001 accccgtccg aaggcaggat agatttgggt ttcacagacg aagggaaata tcttgccgtg
     3061 tgggtggaag ataacgggaa cggcattccg gaatccgaac gcgtccgcgt cctcgatccg
     3121 ttttaccgta ttttgggaac ggagcagcag gggacggggc tggggctgtc gattgccgac
     3181 acgctagcca aaaaatacgg cggatatttg gaactgaccg acagccgcag gttcggacac
     3241 ggtctgctga tacgcgcctt gttggacaag gaaaccctga aatagacaga tgccgtctga
     3301 aggcttcaga cggcattttt tacatcagca caatatcgta ttgttcctgc gtgtaagcgg
     3361 tttcgaccgc cagagaaatc ggtttgccga tgaaatctat cagcattgcc aaggattgcg
     3421 attcttcgtc caaaaacaaa tcgatgacgt tggaggcggc gaggatgcgg aaactttcgg
     3481 catcgtaacg gcgcgcttcg cggacgattt cgcgctggat ttcgtagcac acggtttgcg
     3541 gcgttttcag acggcctctg ccttggcagg aagggcaggg ttcgcagagg acttggttta
     3601 agttttcgcg cgagcgtttg cgcgtcagct cgaccagccc caggctggta aaaccgtgca
     3661 gggtaacgcg ggtacggtcg aaggcgaggg ctttggcaag ctcctgcaac acggcttcgc
     3721 ggtggctttc ctgcgccata tcgatgaagt cgatgatgat gatgccgccg aggttgcgta
     3781 gcctcaattc gcgggcgatg gtgtggcagg cttcgaggtt ggtgcggaag atggtttcgt
     3841 cgaagttgcg tgcgccgacg aagccgccgg tgttcacgtc tatcgtggtc atcgcttcgg
     3901 tggactcgat aatcaggtag ctgccgaagt tgaggttgac gcgcggttgc agggcgcggc
     3961 tgatttcctg ctcgacgttg tgggtttcaa acagcgggcg ttcgcctttg aacaattcta
     4021 tcctgcccaa tgcgccgtgg acgtattgtt cggcaaaacg cgtcatccgt ccgtggttta
     4081 cggtggaatc gacgaggatt ttttgcgtgt cgcagccgac catatcgcgc aatacgcgca
     4141 aactcaaggg caaatcctga taaagcaggg tttccggcgg ccggattttc gcctgttctt
     4201 ggatgtgttc ccacactttg gtcaggtagt cgatgtcgga ctggagctgt tcgtcggtgg
     4261 cgttttcggc gttggtgcgg atgatgtagc ctcggcaggc attttccggc aggagcttgt
     4321 cgaggcgttc gcgcaggctg ctgcgttcgg catcgtcttc gatgcgttgg gacacgccga
     4381 tgtggtcttc ttgcggaaga tggacgagga aacgccccgc cagcgagatt tgggtggaaa
     4441 gccgcgcgcc tttggtgttg atcgggtctt tgatgacctg caccaaaaca gactgccctt
     4501 caaacagcat atgttcgatg cgctgggttt cttcggggtt gcggcgttgt tcgaggacat
     4561 cgacgatgtg taaaaacgcc gcgcgttcca agccgatgtc gataaacgcg ctctgcatcc
     4621 cgggcagcac gcggcgcacc acgcccagat agatattgcc gaccaggctg tgttcgctgt
     4681 tgcgctcgat gtgcagctcg cagatattgt tttcctccaa caccgctacg cgcgtttcct
     4741 gcggcgtgat gttgaccaat atcgtttcgg gcgggcgcgc gatgtctttg gggatgggga
     4801 gtcctgacaa catggttttt cctgaaaatg taataaaaat attttgcatc cgttccgccg
     4861 cgcagcgcgg gtgcaaaaat atttttcaca atgtctatca tactttaaaa aagaaacttt
     4921 gacacattcc gcacatgccg tttgaacgtg catctgttcc gcacttgcca aacaggggaa
     4981 atgcccctat attgattatc attgcaaaac tttcggaaac ccaatatgca gaccgttacc
     5041 atgtacacag gtccgttttg tccctactgc gcgatggcga aaaggctgct gcacgcggca
     5101 ggtgtcggac atatcgacga aatccgtgtc gatgcaagcc ccgaagcctt tgccgaaatg
     5161 cagcagcttt cgggacagcg cagcgtgccg cagattttca tcggcgaaac gcacgtcggc
     5221 ggatttaccg acctctaccg tctccagcag gaaggcgggc tggacggact gctgaaccct
     5281 taacccccaa ctaggaaaac aaaatgagcg aagaactgca acccgtattc agcatcgagc
     5341 gactgtatgt caaagacttg tctttggaag tgccgcacgc gccgcaaatc tttttggaac
     5401 agggcgagcc cgaagtggat atgcgcgttt ccaccggcag ccaaaagctg gaagacggct
     5461 actacaacgt ggatgtaacc gttaccgtaa ccgccaaatt ggataacgag cgcacgatgt
     5521 ttttgaacga agtaacccaa agcggcatct tccgtttgga aaacatcccc gaagaagatg
     5581 tgcagctgct gctgggcgtg gcgtgtccga acatcctctt cccttacgcg cgcgaagccg
     5641 tttccagtac ggtaacgcgc gccggcttcc cgcccgtcct gctcgcgccg attaattttg
     5701 aggcgattta ccaacaacag caggaagccg aagccgccgg ggcttgattc ctgcctgccg
     5761 atgccgtctg aatccgtttc agacggtatt tttgttttcg gataaaatag gtgcgttcaa
     5821 aggaatctgc ctatgatgtc gcccgaaacc cagaaacagc tcaaaatcac cgatgtttcc
     5881 gccaagaagc tcgacaaact caacctccat accgcgtggg atttggtgtt gcacctgccg
     5941 ctgcgttacg aggacgagac gcacattatg ccgattaagg acgcgccgat tggcgtgccg
     6001 tgccaggtcg agggcgaggt tatccatcag gaagtaacgt tcaaaccgcg caagcagttg
     6061 attgtccaaa tcgccgacgg ttccggcagc gtcctttttc tgcgcttcat ccacttttac
     6121 gccagccatc agaaacagac ggcggtcggc aaacgcatcc gcgccgtggg cgaaatcaaa
     6181 cacggctttt acggcgacga gatgattcat cccaaaatcc gcgatgccga gggcggcggt
     6241 ttggcggaaa gcctcacgcc ggtttacccg accgtaaacg gtttgaacca gcccactttg
     6301 cgccgtatta ttcagacggc gttggacgtt acgccgctgc acgacacgct gcccgatgcc
     6361 ctgctgtgcc gtctgaagct gcaacacctc gccgaaagcc tgcgtctttt gcattcgccg
     6421 ccgccgagtt tcacgattca tcagctttca gacggcacgc tgcctgcatg gcaacggctc
     6481 aaattcgacg aacttttggc gcaacagttg tccatgcggc tggcgagaca gaagcgcgtc
     6541 agcggcacgg cggcggcatt gggcggcgac ggtacattga cgcaagccct gcgccacgcc
     6601 ttaccgtttg ccctgactga tgcacaagaa aaagttgttt ccgaaatctg ccgcgacatg
     6661 gcgcaaaccc accccatgca ccgcctgctg caaggcgatg tcggcagcgg caaaaccatc
     6721 gtcgccgcct tgtctgcttt gacggctatt gaatccggcg cacaggtggc tgtaatggcg
     6781 ccgaccgaaa tccttgccga acagcacttc atcaagttca aacaatggct tgagccgttg
     6841 ggtctcgaag ttgtttggct ttccggcagt cagcgcaaaa aagccaagga tgaagccaaa
     6901 gccaaactgg ctgacggcac cgtcaaaatc gccgtcggca cgcatgccct gttttcagac
     6961 gacgtcgagt tccaaaattt gggcttggtg attgtggacg aacaacaccg cttcggtgtc
     7021 gctcaacgcc ttgccctcaa aaacaaaggg cgcgacgtcc atcaattgat gatgtccgcc
     7081 acgcccatcc cgcgcacgct tgcgatgagt tttttcgccg atttggacgt gtccgtcatc
     7141 gacgaattgc cgcccgggcg cacaccgatt aaaacgcgcc tcgtcaacaa cgtccgccgc
     7201 gccgaagtcg aaggcttcgt cctcggcact tgccgaaaag ggcggcaggc gtattgggtc
     7261 tgcccattga ttgaagaaag cgaaaccctg caactgcaaa ccgccgccga aaccctcgcc
     7321 cggcttcaga cggcattgcc cgaactcaat atcggactgg tacacgggcg catgaaggcc
     7381 gccgaaaagg ccgaagtgat ggcgcggttt tcttcggggg agctgaatgt cttggtcgcc
     7441 accaccgtca tcgaagtcgg cgtagatgtg cccaacgccg ccctgatggt catcgaacac
     7501 gccgagcgca tgggcttggc gcagctgcac caattacgcg gacgggtagg gcgcggcgcg
     7561 gcagaaagcg tgtgcgtcct cctgtttgcc gaacccttgg gcgaactcgc caaagcgcgg
     7621 ttgaaagtga tttacgaaca caccgacggc tttgaaatcg cccgccaaga cctcaacatc
     7681 cgcggccccg gcgaatttct cggcgcgcgc caaagcggcg tgcctatgct gcgtttcgcc
     7741 aagctcgaag aagacttaca ccttttggaa caagcgcgcg aaatcgcccc gatactgatt
     7801 gagcaaaacc ccgaaatcgt cgaagcgcat ttggcaagat ggctttccgg cagggaaggg
     7861 tatttgggcg tgtgagcaaa atgccgtctg aaatattaga aaaaaaagtg taacggaaat
     7921 ctg
//
LOCUS       DAWKOX010000088         7909 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.088, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000088 DAWKOX010000000
VERSION     DAWKOX010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7909
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.088"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            144..1154
                     /gene="dusB"
                     /locus_tag="WJK78_001311"
     CDS             144..1154
                     /gene="dusB"
                     /locus_tag="WJK78_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ7598234.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRAFGAGWAVCEMLTS
                     DPTLRNTRKTLHRSDFTDEGGIVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVKAAGVPVTLKTRLGWHDDHQNLPVIAKIAED
                     CGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECTATILNHIRAMHAFYGDTAGV
                     RIARKHIGWYIGEMPDGEQIRREINRLDSAAAQYDTLAGYLERLAEKTDGWACAYRPN
                     AV"
     gene            1185..1424
                     /locus_tag="WJK78_001312"
     CDS             1185..1424
                     /locus_tag="WJK78_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ7598235.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            1427..1963
                     /gene="ruvC"
                     /locus_tag="WJK78_001313"
     CDS             1427..1963
                     /gene="ruvC"
                     /locus_tag="WJK78_001313"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ7598236.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPPDAP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            2014..2901
                     /locus_tag="WJK78_001314"
     CDS             2014..2901
                     /locus_tag="WJK78_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEZ7598237.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWDGKKRETVLKQHFKHMAKLMLEYGLYWYAPAKRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLHFYPAWKSFPGEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGVQDFYKLHETT"
     gene            3620..4414
                     /locus_tag="WJK78_001315"
     CDS             3620..4414
                     /locus_tag="WJK78_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ7598238.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLLHGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWSEFAQAWK"
     gene            4626..7229
                     /gene="pepN"
                     /locus_tag="WJK78_001316"
     CDS             4626..7229
                     /gene="pepN"
                     /locus_tag="WJK78_001316"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ7598239.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLFVKINGAAADYVLEGEMLTIAGVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRATMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAVAFDYQGKRATEAVLLLA
                     EAEQTFPLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGVELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLCADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(7571..>7909)
                     /locus_tag="WJK78_001317"
     CDS             complement(7571..>7909)
                     /locus_tag="WJK78_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598240.1"
                     /translation="YHVDKNSDTMHFKGFKAADVHFIRSGSDLVLSASEQDNVRISGF
                     FYGENHRVDTFVFDDAAISNPDFAKYINAGNNLVQSMSVFGSNTAATGGNVDANIQSV
                     QQPLLVTPSA"
BASE COUNT         2022 a         2043 c         2048 g         1796 t
ORIGIN      
        1 ccgcctgtga gtggcggggc agggaatctg tgtgcggatt atgccataaa acggtgtccg
       61 ccccaatcgc gggcgcgtcc ggagattgga aatcctgctt aaaaaatgta caatggcgta
      121 cttttttgaa acgcggatcc attatgcaca tcggcggcta ttttatcgac aaccccatcg
      181 cacttgcacc gatggcaggc attaccgaca agccgttccg tcgcctttgc cgggcgtttg
      241 gcgcaggttg ggcggtgtgc gaaatgctga ccagcgaccc gacgcttaga aataccagaa
      301 aaaccctgca ccgcagcgat tttaccgatg aaggcggcat cgttgccgtg cagattgccg
      361 gcagcgatcc gcagcagatg gcggatgcgg cgcgttacaa cgtcagcctt ggggcgcagc
      421 ttatcgacat caatatgggc tgtcccgcca agaaagtctg caatgtccaa gccggtagcg
      481 cgctgatgca gaacgagccg ctggttgccg ccattttgga agcggtggtc aaggcggcgg
      541 gcgttcccgt taccctcaaa acccgtttgg gttggcacga cgaccatcaa aacctgcccg
      601 tcatcgccaa aatcgccgaa gattgcggca tcgccgccct tgccgtccac ggacgcacgc
      661 gcacacaaat gtacaaaggc gaagcacgtt acgaactcat cgccgaaacc aaatgccgtc
      721 tgaacatccc ggtctgggtc aacggcgaca ttacctcgcc gcaaaaagcc caagccgtcc
      781 tcaaacaaac cgccgcagac ggcatcatga tagggcgcgg tgcgcaaggc aggccgtggt
      841 tcttccgcga tttgaaacat tatgccgaac acggtgtttt gccgcctgcc ttgagtttgg
      901 cagaatgcac cgccactatt ttgaaccaca tccgagccat gcacgcgttt tacggcgaca
      961 ccgccggtgt gcgcatcgca cgcaaacaca taggctggta catcggcgag atgcccgacg
     1021 gcgagcagat acgccgtgaa atcaaccgct tggatagtgc ggcggcgcaa tacgacacac
     1081 ttgccggtta tcttgaaaga cttgccgaaa aaaccgacgg ttgggcgtgc gcctaccgcc
     1141 caaatgccgt ctgaacaccc gattatcctt ttgaaagcgc gattatgccc catacccttc
     1201 ccgatatttc ccaatgtatc agacaaaatt tagaacaata tttcaaagac ctgaacggta
     1261 ccgaaccttg cggcgtgtac gatatggtat tgcatcaggt ggaaaagccg ctgctggtgt
     1321 gcgtgatgga gcaatgcggc ggtaatcagt ccaaagcctc cgtcatgttg ggactgaacc
     1381 gcaatacctt gcgtaaaaaa ctgattcaac acggtttgct gtgaatatgt cggcaaccgt
     1441 ccgtatctta ggtatcgacc cgggcagccg cgtaacgggt ttcggcatca tcgatgtcag
     1501 ggggcgcgat catttttacg tcgcctccgg ctgcatcaaa acgcctcccg atgcgcctct
     1561 ggcagacagg attgccgtga ttgtgcggca catcggcgaa gtcgttgccg tttacaagcc
     1621 gcagcaggcg gcggtggaac aggtgttcgt caacgtcaat ccggcatcga cgctgatgct
     1681 gggtcaggct aggggcgcgg cattggcggc attggtcagc cataagctgc ccgtttcgga
     1741 atacacggcc ttgcaggtca aacaggcggt agtcggcaaa ggcaaggcgg cgaaagaaca
     1801 ggtgcagcat atggtggtgc agatgctggg gctttcggga acgccgcagg cggatgcggc
     1861 ggacggtctt gccgtcgcgc tgacccacgc cttacgcaac cacgggcttg ccgccaaact
     1921 caatccttcg gggatgcagg tcaagcgcgg caggtttcaa tagtttcaga cggcatttgt
     1981 attttgccgt ctgaaaagaa aatgtgtatc gagatgaaat ttatattttt tgtactgtat
     2041 gttttgcagt ttctgccgtt tgcgctgctg cacaaacttg ccgacctgac gggtttgctc
     2101 gcctaccttt tggtcaaacc ccgccgccgt atcggcgaaa tcaatttggc aaaatgcttt
     2161 cccgagtggg acggaaaaaa gcgcgaaacc gtattgaagc agcatttcaa acatatggcg
     2221 aaactgatgc ttgaatacgg cttatattgg tatgcgcctg ccaaacgcct gaaatcgctg
     2281 gtgcgttacc gcaataagca ttatttggac gacgcgctgg cggcagggga aaaagtcatc
     2341 atcctgtatc cgcactttac cgcgttcgag atggcggtgt acgcgcttaa tcaggatgtc
     2401 ccgctaatta gtatgtattc ccaccaaaaa aacaagatat tggacgcaca gattttgaaa
     2461 ggccgcaacc gctacgacaa cgtcttcctc atcgggcgca ccgaagggct gcgcgccctc
     2521 gtcaaacagt tccgcaaaag cagcgcgccg tttctgtatc tgcccgatca ggatttcgga
     2581 cgcaacgatt cggtttttgt ggattttttc gggattcaga cggcaacgat taccggcttg
     2641 agccgcattg ccgcgcttgc aaatgccaaa gtgattcccg ccatccccgt cagggaggcg
     2701 gacaatacgg ttacactgca tttctacccg gcttggaaat cctttccggg tgaagacgcg
     2761 caggccgacg cgcagcgtat gaaccgcttt atcgaagagc gggtgcgcga acatcccgag
     2821 cagtattttt ggctgcacaa gcgttttaaa acccgtccgg aaggtgtaca ggatttttac
     2881 aaattacacg aaactacata gtggactatt aagggaaaat tgagttttgc ttaaatgcga
     2941 aaaattgaat tatataaaca gaagcattta ataattgctg ttattttaag tgtctaaaaa
     3001 ataatatttt ttgattttaa aaatagattt caaagaaaat ttggagaata catgataaat
     3061 caatgaatat attctattga tatggttaat atattaaaat tattttcctt taaaaacata
     3121 atattataaa ttattattca ataactgcta ttttattcgg tgccagcttg agaaatatat
     3181 tgtcaaatat atagacatta taaaattaag tatcaattta aataaatttt tagaatttta
     3241 atctaaaaaa tcaaaaaatt cactatttta taaaataaac gcttctatat tcgttttgta
     3301 aaaaatgctt ggcaagctgt aaaaaatggc gtacatttcg ctacatggaa ttacacaaca
     3361 ggcaggaaat gccgtctgaa aggattttcc ggtcaatctt gcgattggtc ggggtttcat
     3421 cggaaacggt gaaacaaaag tttgccggcg tagagttgag ctacgcgggc aaagccgcag
     3481 gcgaaagcct gtattgtttg tgaagcgtaa atctctgatt tgaggtattg gggcaatcct
     3541 gtggggggtt gcctcttttt ttatccgcct tttaatgaca caataggcgc aagtctgttt
     3601 ttgaatgcaa ggtactgcca tgaatacgat tttggctttc gatattgaaa ccgtacccga
     3661 tgtgcagggt atccgaacat tgtacgagct gccgtcctcg ctgcccgacg atgaagtggt
     3721 gctgtttgcc cagcaaaaac gccgtgctca gacgggtggg gattttatgc agcatcatct
     3781 tcatcagatt gtggcgattt cgtgctgcat gcgttggggg caggataaag tccatgtcgg
     3841 caccatcggc gagatggacg atggcgaaga agtcgtgatt gccaaatttt tcgagttgat
     3901 tgaaaaacat acgccgcaac tggtcagttg gaacggcggc ggtttcgacc tgccggttct
     3961 gcattaccgt tcgctgctac acggcatcaa cgccgcgcgc tattgggata tgggcgacgg
     4021 cgatttcggc gacagccgcg atttcaagtg gaacaactac atcagccgct accaccaacg
     4081 tcattgcgat ttgatggatt tgctcgcgct ttaccagccg agggcaaacg tgccgctgga
     4141 cgatatggcg aaactgtgcg gttttccagg caagctgggt atggacggca gcaaggtgtg
     4201 ggatgcgttc cacgcgggca ggctgaaaga aatccgcaat tattgcgaaa ccgatgccgt
     4261 gaatacgtat ttgatgtatc tgcgtttttg tctggtcagc ggcagattcg acgcggacga
     4321 atacgaaatg gaaatcaagc ggatcagaaa ctatctttcc gcccaaacag aagataaacc
     4381 gcattggtca gaatttgccc aagcgtggaa atagaaaacc tgctgtccga aggcggtacg
     4441 cttgtgccgc cgtttcggtt tcagacggca tatggtggat taaattcaaa ccggtacagc
     4501 ccgtactatc tgtactgtct gtggcttcgt cgccttgtcc tgatttttgt taatccgctt
     4561 taaaagctgt atccgtgctg tctgaagcct tttccagtca aaccaaacaa tattgaaaga
     4621 aaaaaatgag caaaaccgtc cgttatctga aagattacca aacgcctgcc taccgcatcc
     4681 ttgaaaccga cctgcatttt gacattgccg aaccgcaaac cgtcgtgaaa tcacgtttga
     4741 cggtcgagcc gcagagggta ggagagccgc tggtgttgga cggttcggcg aaactcttgt
     4801 tcgtcaaaat caatggggcg gcagcggatt atgtgttgga aggcgagatg ctgacgattg
     4861 caggcgtgcc gtccgaacgc ttcaccgtcg aagtggaaac cgagatcctg ccggcggaaa
     4921 acaaatcgct gatggggctg tatgcttccg gtggcaatct gtttacccaa tgcgagccgg
     4981 agggcttccg caaaatcacg ttctacatcg accgtccgga tgtgatgtcc aaattcacga
     5041 ccaccatcgt tgcggacaaa aaacgctatc ccgttttgct ctccaacggc aacaaaatcg
     5101 acggcggcga gtgttcagac ggccgccatt gggtgaaatg ggaagacccg tttgccaaac
     5161 cgagctattt gtttgctttg gtcgcgggcg atttggcggt aacggaagac cgtttcacca
     5221 ccatgagcgg cagaaacgtc aaaatcgagt tttacaccac cgaagcggac aagcccaagg
     5281 tcggctttgc cgtggaatcc ttgaaaaacg cgatgaagtg ggacgaaacg cgcttcggct
     5341 tggaatacga cttggatatt ttcatggtcg tcgccgtagg cgatttcaat atgggtgcga
     5401 tggaaaacaa gggtttgaac atctttaaca ccaagttcgt ccttgccgac agccgaaccg
     5461 ccaccgatac cgattttgaa ggcatcgaat ccgtgatcgg acacgaatat ttccacaact
     5521 ggacgggcaa ccgcgttacc tgccgcgact ggttccagct ttcactgaag gaagggctga
     5581 ccgtgttccg cgaccaagaa ttttccggcg accgcgccag ccgcgccgtg cgccgcatcg
     5641 agaacatccg cctgctgcgc cagcaccagt tccccgaaga cgcaggcccg accgcccatc
     5701 cggtgcgccc cgccagctat gaggagatga acaatttcta caccatgacc gtttatgaaa
     5761 aaggcgcgga agtggtgcgg atgtatcaca ccctgctcgg cgaagagggc ttccaaaaag
     5821 gcatgaagct ctatttccaa cgccacgacg ggcaagccgt gacctgcgac gatttccgcg
     5881 cgacaatggc ggacgcgaac ggcattaatc tcgaccagtt cgccttgtgg tacagccagg
     5941 cgggcacgcc cgttttggaa gcggaaggtc gtctgaaaaa caatgttttc gagttgacca
     6001 ttaaacaaac cgtgccgccc acgcccgata tggcggacaa gcagccgatg atgattcccg
     6061 tcaaaatcgg gctgctgaac cgcaacggcg aagcggtggc atttgattat cagggcaaac
     6121 gcgcgaccga agccgtgttg ctgctggccg aagccgaaca gaccttcccg ctcgaaggcg
     6181 taaccgaagc cgtcgttccc tcgctgctgc gcgggttcag tgcgccagtg catctgaact
     6241 atccgtacag cgacgatgac ctgctgctcc tgcttgccca cgacagcgac gccttcacgc
     6301 gctgggaagc cgcgcaaacg ctctaccgcc gcgccgtcgc cgccaacctt gccgcgcttt
     6361 cagacggcgt cgagttgccg aaacatgaaa aactgcttgc cgccgtcgaa aaagtcattt
     6421 cagacgacct cttggacaac gccttcaaag ccctgctttt gggcgttccg tctgaagccg
     6481 aactgtggga cggcgcagaa aacatcgacc cgctgcgcta ccatcaggcg cgcgaagcct
     6541 tgttggatac gcttgccgtc cgcttcctgc cgaaatggca cgaattgaac cgtcaggcgg
     6601 cgaagcagga aaaccaaagc tacgagtaca gccccgaagc tgccggctgg cgcacgctgc
     6661 gcaacgtctg ccgcgccttc gtcctgtgcg ccgaccccgc gcacatcgaa accgttgccg
     6721 aaaaatacgg cgaaatggcg caaaacatga cccacgaatg gggcatcctg tccgccgtta
     6781 acggcaacga aagcgatacg cgcaaccgcc tgctggctca gtttgccgac aagttttcag
     6841 acgacgcgct ggtgatggac aaatatttcg ccctcgtcgg ctcaagccgc cgcagcgaca
     6901 ccctgcaaca ggttcaaacc gccttgcagc atccgaagtt cagcctcgaa aatcccaaca
     6961 aagcccgctc gctcatcggc agcttcagcc gcaacgtccc gcatttccac gcagaagacg
     7021 gcagcggcta ccgcttcatc gccgacaaag tcatcgaaat cgaccgcttt aacccgcagg
     7081 tcgccgcccg cctagtgcag gcgttcaatc tctgcaataa gctcgagccg caccgcaaaa
     7141 acttggtgaa acaagcattg cagcgcattc gggcgcagga aggattgtcg aaagacgtgg
     7201 gcgaaatcgt cggcaaaatt ttggattgag gccgtcaaac agaaaaacaa tgccgtctga
     7261 tatagttaca cacacgtttt atcatcactt ccccatcgtt ttattacgca atggcaaaac
     7321 ggccgcaaag tcatattaat tatagtggat taacaaaaat caggacaagg cgacaaagcc
     7381 gcagacagta cagatagtac ggtaaggcga ggcaacgctg tactggtttt tgtgaatcca
     7441 ctatattgct agaagtgcac cgattaaggt taattaaaat acgaccctta tcccaatatt
     7501 aagaaaaaca gcaatcaaaa taaacttgat tgctgttttt cagtttaagc catgaatgtg
     7561 attaggctcc ttatgcagat ggcgttacca ataacggctg ctgtacggat tgtatattgg
     7621 catccacatt tcctcctgtc gcagcagtat tagaaccgaa cacagacata gactgtacca
     7681 aattattgcc agcattaata tacttggcaa aatctggatt actgatagct gcatcatcaa
     7741 agacaaatgt atctacacga tggttttcac catagaagaa tccggaaata cgtacgttgt
     7801 cttgttcaga agcgctaagc accaaatcac ttccggaacg gataaaatga acatctgctg
     7861 ctttaaatcc tttaaagtgc atagtgtcag agtttttatc cacatggta
//
LOCUS       DAWKOX010000089         7884 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.089, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000089 DAWKOX010000000
VERSION     DAWKOX010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7884)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7884)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7884
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.089"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..1354)
                     /locus_tag="WJK78_001318"
     CDS             complement(<1..1354)
                     /locus_tag="WJK78_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HEZ7598241.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLIDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAARLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     N"
     gene            complement(1428..2768)
                     /locus_tag="WJK78_001319"
     CDS             complement(1428..2768)
                     /locus_tag="WJK78_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ7598242.1"
                     /translation="MLNPSRKLVELIRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVAAATFAFFTGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKDQ"
     gene            2911..3537
                     /locus_tag="WJK78_001320"
     CDS             2911..3537
                     /locus_tag="WJK78_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ7598243.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLALMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYVVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(3601..5019)
                     /locus_tag="WJK78_001321"
     CDS             complement(3601..5019)
                     /locus_tag="WJK78_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ7598244.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAVRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKG"
     gene            5346..6074
                     /locus_tag="WJK78_001322"
     CDS             5346..6074
                     /locus_tag="WJK78_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ7598245.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     SNPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWADVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(6133..6621)
                     /locus_tag="WJK78_001323"
     CDS             complement(6133..6621)
                     /locus_tag="WJK78_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ7598246.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            6651..6863
                     /locus_tag="WJK78_001324"
     CDS             6651..6863
                     /locus_tag="WJK78_001324"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ7598247.1"
                     /translation="MPILLDISRDGKGRIDTGSGADDFGFPRYAQNLTRDKTAICPHN
                     AHKKIHPEDLNFSKFSESKVYFNEII"
     gene            complement(7380..7844)
                     /locus_tag="WJK78_001325"
     CDS             complement(7380..7844)
                     /locus_tag="WJK78_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEZ7598248.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         2036 a         2127 c         1973 g         1748 t
ORIGIN      
        1 aatttaattc actatatttt cccgacaggc ggatttgaag tttctccaca tatccggcgc
       61 gttcggcgcg gctggtttcg gggcggtgcg tattgagcga cgaccatttc caatgactgc
      121 gggctttgtt gagttcgggc gggagtctgg cggcgtccca cggggctttg cggctgtgca
      181 gctcgatatc cgactgtgcc gcgtgtccgc gcgtttgcag gacgtggagc aaatcgaggg
      241 cgcgggcggc gagcagggtc aaggtttcag ggtcggtgtg caaggtttgg cggccggaga
      301 gtttgtcgga aatggtgcgg gtattgggca ggatgccgcc caaaaagccg ccgattgccg
      361 tacccaatcc gagcgagccg ccgagtgtgg cgatgtccag ccccaagccg atgagcgcgc
      421 cggttgccgc gcccgtgccg gtgcggatgc cgtattgttt gagcaattcg ctgtcgaacg
      481 ggtcttggcg gaaggcttgc ggcatccagt cgccgccgtc gatttcgctg tggtagaaac
      541 ggtagagggc aaacagccgc tgctgcatct gccgttcgag ttggcgtatt tccgcctgca
      601 tggtttgtag cacggtggcg gtatcctcgt tttcgtccac ttcctgcctg aaggcggcgg
      661 catcaattaa aaagtcggcg atttcgcggc gcgcttcgcc gtccagccgc tgccattcgc
      721 gccggcgcat ggctgtcagg cggtcaagtg tgctgcgttc gggcaacatg gtggcgaggt
      781 tttcccacag gcgtagttcg ccttcaaaat caaaggcgac ggtgtcgaac cctgcgaaaa
      841 cgtgcaggtt tctcctcgcc agcatggttg tccacgattc gggaggctgt ccgccggtaa
      901 agttgaacac gggcataacc ggtttggcac accatgaaag gatggtcaac tcgtccctgt
      961 atttgtcgag gacgggttcg cgcgcgtcga tgacgtacat tgccatatcg ctttgcaaga
     1021 cttgccgtaa gactttggct tcctgattga aatcatggtg cgcgccgtgg ctgccgagaa
     1081 actgttgcag ccgttcgatg ccgtctgaac gattgtccgt atggttttcc agccattcca
     1141 gcacgccgcc tgcgtcttcg agtccgggcg tgtcgtacag gaaaaccagc gtgtctgcgc
     1201 cgtcgctgat ggcggcttct tcgacatgac gcgtggtcga tggggcgttt ctgacttcgc
     1261 cgaaaccgct gtcgcgcaac agggtacgaa ggagcgaggt tttgccggtg ttggtatgcc
     1321 cgacgacggc gagggaaagg ggttgtttgt tcatgatgtt tttgaagaat ggattttcag
     1381 acggtctttt ttcagaatgg cggcttaaca gaacatttca agtgagttta ttggtctttc
     1441 aaacgccctt cctgcgccgc cctgtcaggc tcaagccacg ccgcgccgca ttcggccagc
     1501 gcgttacgcc aatgttccag cttttccgaa aggtcgtctg aaagcccctg ttccgccaaa
     1561 agctgcacca ccgcgccgcc ctgcgccgct tccgaaagtc ggacgatctg ccgcaacacg
     1621 ccgcggtcgg gcacagtttg ggcgcgcacg ccgataagca gttgcgccgg tttctgcttc
     1681 agctctgtct ccagcgcggc aacctgttcc cgattggcgg caacgccctt atccagccat
     1741 tcctgcgcca gcctgccctc gaaccattcg ccgtcctgcc attcggtctc cagcatgacc
     1801 gcccatttcg gcgcatcgtt caagacgatt ttcggcgaaa cggcggacac ggtttcccga
     1861 cgcgtatccg catcggtgat tttgttctgc cagcggcgga tgaccgcctg ataatagggt
     1921 ttttccaaat ccaatccgtt ttcgcttgtt ttcaaaagga ttttgcatac cgcccaagcc
     1981 aagaggcgcg gcaggatgcc gtagcaggcg atactgccga ccagcagccc cgaccaagcc
     2041 cgcgcatcgg caatattgcc gttcagacga ccttcgatga ccgcccgcgc atcaggcacg
     2101 ggaaaaccca gtttcgcagg cagccatgcc aacatttcca ccgcgcgtac cgaagcggca
     2161 ttgctcaaca gcgtgctttc ccagttgaac gtatattgcc gcaccaaaag cagcaacaat
     2221 accgacacca gcattccgag cagcgtgcag agccacaggc tgtgcgacgt tgcgcctatt
     2281 ttccaacgta ccgaaggttg ccgccactcg tccgcataca gccgcaacac cgcctgattt
     2341 acagggtctt tgccccgaaa ccacgtcgcc ggactgctga aaaaacgccc cactttcacg
     2401 cgcaggaaca acattgccaa ccatactgcc agcatcagcg tattcatgcc caacacgccc
     2461 gccaaaacca aaaagaaatt cagaccctga ttgtccatta gaagataagt acctgaaaaa
     2521 ccggtaaaaa acgcaaacgt cgccgccgcc acccacaacc agaacgaccc cgcacgcaca
     2581 cgttccaacg tctcccgcag catacggttc ctgtcaatca tctccgcccg acggatgatt
     2641 ttttcctccg tactgccgtc cacgcggcgc aaagcctccg tcgcctgcac gggatcgccg
     2701 ctgaaaataa aaccgccttc gtccaaaata cggatcagct caaccagttt tcgggatgga
     2761 ttcaacataa aatgccgtct gaaaataaaa aacagatttt aacacacgca ttttcaagaa
     2821 tattcacagt gtaggcaaag agtaaatctc acacagaagc aaaagtatcg gcgtaaactg
     2881 actgcctcta ctttcccgaa agattgtgcg atgtatacag gcgaacgctt caatacttac
     2941 agccatttga gcggtttgat tctggcggcg gcaggtttgg cgctgatgct gctgaaaacc
     3001 ataggacacg gggacggcta ccgtatcttc agcgtatcgg tttacggcat cagccttctt
     3061 ctgctctatt tgagttcctc gctgtaccac ggaattgcag ccggaaaact gaaaagcatt
     3121 ttgaaaaaaa ccgaccactg catgatttat gtcctgattg ccggaagcta cacaccgttt
     3181 gcactggttt ctttgagaaa cgggccgggc tggacggtat tttcactgtc ctggctgctg
     3241 gcggctgcag gaatcgcaca agaactcacc atcggacgga aaagcgaaaa acgactgctg
     3301 tctattgcga tttatgtcgt catgggttgg atggtcttgg cggtaatgaa atccctgaca
     3361 gcctcactcc cgccggcagg actggcttgg ctggcggcag gcggtatgct gtacagcgtc
     3421 ggcatttact ggtttgtaaa cgatgaaaaa atccgacacg ggcacggaat ctggcatctg
     3481 ttcgtattgg gcggcagcat cacccaattt gtcagcgtgt acggttacgt aatctgaatg
     3541 ccgtctgaaa agcaaaacct cccgatcctg aagattggga ggttttctgt ttgccggaca
     3601 tcagcccttg tcgtggaact cgtgaaattc atactgatag gacaaatccc gacccgcttt
     3661 tttctgtgcc aaataatcat cataaatggc acggatttcc ttacgcaaca aaaacagggc
     3721 tatcaagttc gggataacca taaagccgtt gaacatatcg gacaggctcc aaaccaaatc
     3781 gactttgccg agcgtaccca aaacgatggc aagcagaacc aatgcgcgat agatgcccaa
     3841 gtgtcttccc ctgaaaagaa aacggatgtt ggactcaccg aaataatacc agccgataat
     3901 ggtcgtcaag gcgaaaaagg tcagacacac ggcaagcaat tgcgaaccga agcccggaaa
     3961 tgccttgtta aaggcaaatt gagtaaccgc cgcgccctgt tcgcccgaaa ggttggcatc
     4021 ggtcagcagg ataatcagcg cagttgccgt acataccaaa atcgtatcga taaatacacc
     4081 gacaaatgcc gccatacctt gctgcacagg atgcttcaca tccgcagtcg cgtgggcgtg
     4141 cggggtagaa cccatccccg cttcgttgga aaacagaccg cgcgccacgc cgaaacggac
     4201 ggcttcgcgc ataccgatac ccgccgcacc gcccaaaacg gcttcgggat tgaaggcggc
     4261 ggtaaagatg tggttgaaca tcggcacaat atggtcggaa aattcaaaca ggataacgac
     4321 ggcgcacaaa atataaacaa ccgccataaa cggcacgaca aattgggcga tattggcaat
     4381 acggttcacg ccgccaatca caaccatgcc cgcaaggacg gcaagcacaa taccgactgc
     4441 caaagaaggc acatcaaatg caatggtaac ggcagaagca atggagtttg cctgtgtcgc
     4501 attaccgata aagcccaatg cgataatcaa cgcaatggaa aagaaaccgg acaaaaaacg
     4561 cgccgcgccc ctgccgattt tcggagtcag accgtgggtg atgtagaacg ccggcccgcc
     4621 gatgtatttg ccgtggctga cgacgcggta tttctgcgcc agcagtgcct ccgcaaaaat
     4681 cgtggacatc cccaaaacgg cagaaaccca catccaaaaa atcgcgcccg gcccgcctgc
     4741 ggtgatggcg gtcgccacgc cggcgacgtt gcccgtaccg atttgcgcag atatggcaac
     4801 cgccaacgcc tgaaactgcg ataaagactt gtcgtcttta tcgcctttgg caaacaagcc
     4861 gccgaatacg gatttgaatc ccgcgcccag cttggtaatc tgcggcgcac caagatacag
     4921 cgtaaaaaac aggccgatac ccaaaagcgc gtaaatcagc aggtagtccc aaaggaaccg
     4981 attgactgta cccaccagaa cagacaatat attttccata aaataaacct tatcttacaa
     5041 ttaaaatgac tgccttccaa aagacattcc aataaggaaa cacggcgagc agaccgtatt
     5101 tgccgcaaca gatgccttaa attgtcaaca atcggggaga agctgcgcca tcataccgta
     5161 aaatatcgtt aattaaaaca tttctttatt tttaagcgga aagcggagga aatcgctttc
     5221 agacggcatc gacaacggca cggcataaaa caggatattt tgggtacttg caacttatgt
     5281 taaaatgccg accgtaaaaa atctgacaaa aacagattaa ttatttgaaa taagaaagga
     5341 aatttatggc aggccatagc aagtgggcga atatccagca taaaaaagcc cgtcaggatg
     5401 ccaaacgcgg caaaatcttc acccgtttaa tcaaagaaat caccgttgcg gcgcgtatgg
     5461 gcggcggcga ccccggttca aatccgcgcc tgcgcctggc tttggaaaaa gcagccgaaa
     5521 acaatatgcc caaagacaat gtgcaacgcg ccatcgacaa aggtacgggc aacttggaag
     5581 gcgtggaata catcgaattg cgctacgaag gctacggcat cggcggcgcg gctttgatgg
     5641 tggactgcct gaccgacaac aaaacccgca ccgttgccga cgtgcgccac gcgtttacca
     5701 aaaacggcgg taacttgggt actgacggct gcgtggcgtt caacttcgtg catcagggct
     5761 atttggtatt cgaacccggc gttgacgaag acgcgctgat ggaagcggct ttggaagccg
     5821 gtgcggaaga cgtggttacc aacgacgacg gttccatcga agtcattacc gcgccaaacg
     5881 attgggcgga cgtaaaatcc gctttggagg cggcaggtta caaatctgtt gacggcgacg
     5941 ttacgatgcg cgcccaaaac gaaaccgaac tctccggcga cgatgccgtc aaaatgcaaa
     6001 aactgattga cgcgctggaa gacttggacg acgtgcaaga cgtttacact tccgccgtat
     6061 tgaatctgga ctgatacgca gcacagcaga catacaataa aatgccgtct gaacctttca
     6121 gatggcattg atttatttag cccttgccca cgcccaccaa accgtcagga caaccgccag
     6181 aaaatacgcc gcgctccaaa caggcaaagc aacccctaac agataatccg gttcggcaca
     6241 atttccgaac ccgcgcacga caggctcgaa ccaatcaaac aaagaccagc ccttcaagcg
     6301 gaacgtccac ggcgcaccgc acgaaggagc cgtacccggc ggcagcgact gcaaccacaa
     6361 ctgatatgcc gcaacagaaa tacccgtaac ggccggaatg ctgataaaga cagcaccgaa
     6421 caaaccgccc gcccttcttc ttggtctgca catcaggaca attgccgtac acaatgcggt
     6481 tgccaaaacg cataaccgct gactgataca caaaacgcaa ggctccatac ccaaaacata
     6541 ctgtgccgcc aaagaaccgg caaatgcaca gaccgaaacg gcaaacagca gccaaacggc
     6601 ttttctaaat aacggggtca ttttctcaac acaccaatca aaataccgat atgccgattt
     6661 tgctggatat atcccgagat ggcaagggac gaatcgacac cggctcaggt gcggacgatt
     6721 tcggttttcc ccgatatgca caaaacctga caagggacaa aacggcgatt tgcccgcaca
     6781 atgcccacaa aaaaatacat ccggaggatt tgaatttcag caaatttagc gaatcaaaag
     6841 tttatttcaa tgaaatcata tgattttttt gaataagcgg attgatgggt ttttgaagga
     6901 atttgttacc ggatagccat cgggcaagtt ttttgcaaaa tttgaatcgg tcgggtaaat
     6961 tttcaaaaaa taattgacag cggataagaa acggcggata attcccgccg tcgagttgct
     7021 tgatgcagct tgatttttct cctctatttc tcctttgtag acttggcaca cattcaaccg
     7081 gatgtgtgca tttttttatc tccgcttttt ttgaaattta attactttta ttgtttgaaa
     7141 ttccattctt taagaaattt aacaagaaaa acgcttgctt tttgaccgga aaagctgcat
     7201 aattcgttcc gttagctggt tcgagtagtc agttaatagt ttctcctcta tttctccttt
     7261 gtagacttgg cacacattct attgaatgtg tgcatttttt tatctgaagc aacaagcctc
     7321 tgtgcgtgat gttgttatgt ttcatttagg tgtcaaaccg catagccagc ctgaaatatt
     7381 caatccaaat ccaaaaccgg attttctttg acctcctcca tcacaacata actcctactc
     7441 tccgaagcgg caggcagttg caataggata ttgcctagca tatcccgata ggcagacata
     7501 tcgggcaaac gtactttaat cagatagtcg tattcgcccg acaccaagtg gcattccata
     7561 atttgcggaa ttttcagcac ttcttttttg aaatcttcga aaatattgcc cgatttggat
     7621 tgcagcttca gctcgacaaa aaccaatagt ggtttgccca acagatgggg attgagatgg
     7681 gcgtgatagc cggaaatata atgttcccgc tccaaacggc gcaccctctc tgtaacgggc
     7741 gtggtggaca agcctacctt ctcggcaagc tccgtcatcg ggatgcgggc attctgttgg
     7801 aggatcttaa gaatgcggaa atcgatttta tctagttctt tcatttggat taccttgtat
     7861 ttattattga ttttaacaaa taga
//
LOCUS       DAWKOX010000090         7827 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.090, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000090 DAWKOX010000000
VERSION     DAWKOX010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.090"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            120..1025
                     /gene="glyQ"
                     /locus_tag="WJK78_001326"
     CDS             120..1025
                     /gene="glyQ"
                     /locus_tag="WJK78_001326"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ7598249.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTPDGNTVSYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1102..1512
                     /locus_tag="WJK78_001327"
     CDS             1102..1512
                     /locus_tag="WJK78_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HEZ7598250.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFDRFMDELIAYLEVNDFGMAGGGDCGDFSCLFQKSGARSLGETEKKAIISWLA
                     GREDVATLHTTPLVDGFYGDDGWENYSETYKQAD"
     gene            1533..3596
                     /locus_tag="WJK78_001328"
     CDS             1533..3596
                     /locus_tag="WJK78_001328"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ7598251.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVA
                     SFAERKAAIQTALEGQARSLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLSSVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAALGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3613..4659
                     /locus_tag="WJK78_001329"
     CDS             3613..4659
                     /locus_tag="WJK78_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ7598252.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLDILIVDDGSTDGTLAIARRFQEQDGRIRILAQPRNSGLIPSLNIGLDELAKSG
                     MGEYIARTDADDIAAPDWIEKIVGEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHG
                     KIWKKPTRHEDIADFFPFGNPIHNNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSK
                     LGRLAYYPEALVKYRLHANQVSSKYSVRQHEIAQGIQKTARNDFLQSMGFKTRFDSLE
                     YRQIKAVAYELLEKHLPEEDFERARRFLYQCFKRTDTLPAGAWLDFAADGRMRRLFTL
                     RQYFGILHRLLKNR"
     gene            4701..5528
                     /locus_tag="WJK78_001330"
     CDS             4701..5528
                     /locus_tag="WJK78_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ7598253.1"
                     /translation="MQNHVISLASAAERRAHITDTFGVRGIPFQFFDALMPSERLEQV
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYITVFEDDVLLGEGAEKFLA
                     EDAWLQERFDPDSAFIVRLETMFMHVLTSPSGVADYGGRAFPLLESEHWGTAGYIISK
                     KAIRFFLDRFAALPPEGLHPVDLMMFSDFFDREGVPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQWRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            5540..5635
                     /locus_tag="WJK78_001331"
     CDS             5540..5635
                     /locus_tag="WJK78_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lacto-N-neotetraose biosynthesis glycosyl
                     transferase"
                     /protein_id="HEZ7598254.1"
                     /translation="MDIVFAADGRMRRLFTLRQYFGILRRLLKNR"
     gene            5677..6519
                     /locus_tag="WJK78_001332"
     CDS             5677..6519
                     /locus_tag="WJK78_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ7598255.1"
                     /translation="MQNHVISLASAAERRAHIAATFGARGIPFQFFDALMPSEELNRM
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
     gene            complement(7046..7771)
                     /locus_tag="WJK78_001333"
     CDS             complement(7046..7771)
                     /locus_tag="WJK78_001333"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ7598256.1"
                     /translation="MPRFHLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAARLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT         1935 a         2055 c         2118 g         1719 t
ORIGIN      
        1 aatttaatcc actatatcat gtatgccgtg ttttcaaatc agtctgtctt tgagataaac
       61 ctatccaaac agcaatggaa acagtaaaat aaacccttta ttttatcgaa tcataagcca
      121 tgcttacctt ccaacaaatc atcttcaaac tgcaaacctt ctgggcagac aaaggctgca
      181 ccgtcatcca acccttcgac atggaagtcg gtgccggcac atcccatccc gccacctgcc
      241 tgcgcgcgct cgggcccgag ccttggtttg ccgcctacgt ccaacccagc cgccgcccca
      301 aagacggccg ctacggcgac aaccccaacc gcctgcaaca ctattaccaa ttccaagtcg
      361 ctctcaaacc cgcccccgcc aatatccaag acctttatct cgactccctg cgcgaattgg
      421 gcatcgaccc caaagtgcac gacatccgct tcgtcgaaga cgactgggaa aaccccaccc
      481 tcggcgcatg gggcttgggc tgggaagttt ggctcaacgg catggaagta acccagttta
      541 cctatttcca acaagtcggc ggcatcgact gcacgcccgt actcggcgaa atcacctacg
      601 gcatcgaacg cttggcgatg tacctgcaag gcgtggaaaa cgtctatgac ctcgtttggg
      661 caaaaacgcc ggacggcaac accgtaagct acggcgacgt gtaccaccaa aacgaagtcg
      721 aacaatccac ctacaacttc gaatacagcg atgccgattg gctgctgcgc cagttcaacg
      781 actacgaagc gcaagccaaa cgcctgcttg ccgaagaaaa cgccgccctc gccttgcctg
      841 cctacgagct ggttctcaaa gcggggcata cgttcaatct tttagacgca cgcggcgcga
      901 tttccgtaac cgagcgggca acttatattg gacgtattcg tgcattgagc cgcgccgtgg
      961 cgcaaaaata tgttgaaagc cgcgaaaaac tgggcttccc tttaatgaag gcaaatgctg
     1021 cctaaggggg cgacgatttt ttacgttcgg gcggcacgat aaggcagccg tccgtaaacc
     1081 attatatatt ttaggaaaat catgcctgtc tatttccgca ccccaagcag gaaacgcctg
     1141 cacaaaatga accgccgcca gcataaaaag ctgcatttgg gcgagtttca aacattgatt
     1201 ttcggcgttc aaggcagttt gcaccaagct gaggacgatg ccgaagcgtt cgaccgcttt
     1261 atggacgagc tgattgcgta tcttgaggta aacgactttg gaatggcggg cgggggcgat
     1321 tgcggcgatt tttcgtgcct gtttcaaaaa tccggtgccc gaagcttggg cgaaaccgag
     1381 aaaaaagcca ttatctcttg gctggcaggc cgcgaagatg tcgccacttt gcacaccacc
     1441 ccgctggttg acggttttta cggggatgac ggctgggaaa attacagtga aacctataaa
     1501 caggcagatt aaccaaattt aaagaaagcc gaatgatgac ccaaaccctt ttaatcgaac
     1561 tccttaccga agaactcccg cccaaagcac tgaataatct gggcaaccat tttgccgccg
     1621 ccgttgccga aggcttggaa aaagcgcaac tggttgacgg tgcagccgaa tttacggctt
     1681 atgcctcgcc gcgccgtttg gcggttcaag tcaaaaacgt taaagccgtt caggccgacc
     1741 aaaaaatcgt gaaaaaaggc cctgccgtgg cgaatgccat gaaagacggt gcgccgacca
     1801 aggctttgga aggtttcgca cgcggtgcgg gcgcgaaaat cgaagacttg accatcgtcc
     1861 acgacggcaa acaggatgtg tacgcctacg aatacgtcca aaccggcaaa ccgctgggcg
     1921 aacttttgga agacattatc aatcaagccg ttaagaaact gccgattccg aaagtgatgc
     1981 gttggggcag cagcacgttt accttcgtgc gccctgttca cgggctgatt gtgctgcacg
     2041 gcggcgacat cgtaaacgtc agcgttttgg gtctgcaaag cagcaatcaa accttgggac
     2101 accgcttctt gtccaacggc gaaatcacca ttgaaaacgc cgacagctac gccgaacaaa
     2161 tgcgcgggca aggcaaagtc gtcgcttcgt ttgccgagcg caaagccgcg attcagacgg
     2221 cattggaagg gcaggcgcgc agtctgaacg ccgccgtcgc cgccgatgaa gcattgttgg
     2281 acgaagtaac cgcgctggtc gaatggcctg ttgttttgga agccggtttt gaggaacatt
     2341 tcctcgccgt gccgcaggaa tgcttgattt taacgatgca gcaaaaccaa aaatactttc
     2401 cgctgctcga ccaaaacggc aagctgatga accgcttcct gctggtttcc aacctgcaaa
     2461 ccgaagaccc gtcgcacatc atccgaggca acgaacgcgt tttgcgcgcg cgcctgtctg
     2521 atgccgagtt cttctacaaa caagaccaaa aagcgacttt ggaaagccgc ctgccgaaat
     2581 tgtccagcgt ggtgtaccac aacaaaatcg gctcgcaagc cgaacgcatc gaacgcctgc
     2641 aaagcattgc cgcccacatc gccaaagcat tgggcgcgga tgccgccgct gccgaacgcg
     2701 ccgcgcgtct tgccaaagcc gacttggtaa ccgaaatggt tggcgagttc cccgaactgc
     2761 aaggcacgat gggcaaatac tatgcacgtt tggacggcga aaccgaagaa atcgccgaag
     2821 ccatcgagca gcactatcag ccgcgttttg ccggcgacaa gctgcccgaa agcaaaattg
     2881 ccgccgccgt ggcactggcg gacaagctgg aaaccctggt cggcatttgg ggcatcggtc
     2941 tgattccgac cggcgacaaa gacccctacg ccctgcgccg cgccgccttg ggtattttgc
     3001 ggatgctgat gcagtacggt ttggacgtga acgaactgat tcagacggca ttcgacagct
     3061 tccccaaagg tttgctcaac gaaaaaacgc cgtctgaaac cgccgacttt atgcaggcgc
     3121 gccttgccgt gttgctgcaa aacgattatc cgcaagacat cgtcgccgcc gtactcgcca
     3181 aacagccgcg ccgtttggac gatttgaccg ccaaactgca agccgttgcc gcgttcaaac
     3241 agctgcccga agccgccgcg ctcgccgccg ccaacaaacg cgtgcaaaac ctgctgaaaa
     3301 aagccgatgc cgcgttgggt gcggttaacg aaagcctgtt gcaacaggac gaagaaaaag
     3361 ccctctttgc cgccgcgcaa ggcttgcagc cgaaaatcgc cgccgccgtc gccgaaggca
     3421 atttccaaac cgccttgtcc gaactggctt ccgtcaaacc gcaagtcgat gcattctttg
     3481 acggcgtgat ggtaatggcg gaagatgccg ccgtaaaaca aaaccgcctg aacctgctga
     3541 accgcttggc agagcaaatg aacgcggtag ccgacatcgc gcttttgggc gagtaaccgt
     3601 tgtacagtcc aaatgccgtc tgaagccttc agacggcatc gtgcctatcg ggagaataaa
     3661 ttgcagcctt tagtcagcgt attgatttgc gcctacaacg tagaaaaata tttcgcccaa
     3721 tcattagccg ccgtcgtgaa tcagacttgg cgcaacttgg atattttgat tgttgatgac
     3781 ggctcgacgg acggcacact tgccattgcc cggcgtttcc aagaacagga cggccgcatc
     3841 cgcatcctcg cgcagccgcg caattccggc ctgattccct ctttaaacat cgggctggac
     3901 gaattggcaa agtcaggaat gggggaatat attgcacgca ccgatgccga cgatattgcc
     3961 gcccccgact ggattgagaa aatcgtgggc gagatggaaa aagaccgcag catcatcgcg
     4021 atgggcgcgt ggctggaagt tttgtcggaa gaaaaggacg gcaaccggct ggcgcggcat
     4081 cacaggcacg gcaaaatttg gaaaaagccg acccgacacg aagatattgc cgactttttc
     4141 cctttcggca accccataca caacaacacg atgattatga ggcgcagcgt cattgacggc
     4201 ggtttgcgtt acaacaccga gcgggattgg gcggaagatt accaattttg gtacgatgtc
     4261 agcaaattgg gcaggctggc ttattatccc gaagccttgg tcaaataccg ccttcacgcc
     4321 aatcaggttt catccaaata cagcgtccgc caacacgaaa tcgcgcaagg catccaaaaa
     4381 accgccagaa acgatttttt gcagtctatg ggttttaaaa cccggttcga cagccttgaa
     4441 taccgccaaa taaaagcagt agcgtatgaa ttgctggaga aacatttgcc ggaagaagat
     4501 tttgaacgcg cccgccggtt tttgtaccaa tgcttcaaac ggacggacac gctgcccgcc
     4561 ggcgcgtggc tggattttgc ggcagacggc aggatgcggc ggctgtttac cttgaggcaa
     4621 tacttcggca ttttgcaccg attgctgaaa aaccgttgaa aaacgccgct ttatccaaca
     4681 gacaaaaaac aggataaatt atgcaaaacc acgttatcag cttagcttcc gccgcagaac
     4741 gcagggcgca cattaccgat accttcggcg tgcgcggcat cccgtttcag tttttcgacg
     4801 cactgatgcc gtctgaaagg ctggaacagg taatggcgga actcgtaccc ggtttgtcgg
     4861 cgcaccccta tttgagcgga gtggaaaaag cctgctttat gagccacgcc gtattgtgga
     4921 agcaggcatt ggacgaaggt ctgccgtata tcaccgtatt tgaggacgac gttttactcg
     4981 gcgaaggcgc ggagaaattc cttgccgaag acgcttggct gcaagaacgc tttgaccccg
     5041 attccgcctt tatcgtccgc ttggaaacga tgtttatgca cgtcctgacc tcgccctccg
     5101 gcgtggcgga ctacggcggg cgtgcctttc cgctgttgga aagcgaacac tgggggacgg
     5161 cgggctatat catttccaaa aaagcgatac ggtttttcct ggacaggttt gccgccctgc
     5221 cgcccgaagg gctgcacccc gtcgatctga tgatgttcag cgattttttc gacagggaag
     5281 gagtgccggt ttgccagctc aatcccgcct tgtgcgccca agagctgcat tatgccaagt
     5341 ttcacgacca aaacagcgca ttgggcagcc tgatcgaaca cgaccgcctc ctgaaccgca
     5401 aacagcaatg gcgcgattcc cccgccaaca cattcaaacg ccgcctgatc cgcgccttga
     5461 ccaaaatcag cagggaaagg gaaaaacgcc ggcaaaggcg cgaacagttc attgtgcctt
     5521 tccaataaaa ggaggagaga tggacatcgt atttgcagca gacggcagga tgcggcggct
     5581 gtttaccttg aggcaatact tcggcatttt gcgccgattg ctgaaaaacc gttgaaaaac
     5641 gccgctttat ccaacagaca aaaaacagga taaattatgc aaaaccatgt tatcagctta
     5701 gcttccgccg cagaacgcag ggcgcacatt gccgcaacct tcggcgcgcg cggcatcccg
     5761 tttcagtttt tcgacgcact gatgccgtct gaagaactga atcggatgat ggcggaattg
     5821 gtgccgggat tggcaaaaca gcacctgttg agcgaagtgg aaaaagcctg ctttatgagc
     5881 cacgccgtat tgtggaaaca ggcattggat gaaggtctgc cctatgttgc cgtatttgag
     5941 gatgatgtcc tgcttggcaa agacgcagaa aagttccttg ccgaagatac ttggttggaa
     6001 gagcgttttg ataaggattc tgcctttatc gttcgtttgg aaacgatgtt tgcgaaagtt
     6061 attgtcagac cggataaagt cctgaattat gagaaccggt catttccttt gctggagagc
     6121 gaacattggg ggacggctgg ctatatcatt tcgcgtgagg cgatgcggtt tttcttggaa
     6181 aggtttgccg ttttgccggc agagtggatt aaagcggtag attggatgat gtttacttat
     6241 ttctttgata aggaggggat gcctgtttat caggttaatc ccgccttatg tacccaagaa
     6301 ttgcattatg ccaagttcct cagtaaaaac agtatgttgg gtagcgattt ggaaaaagat
     6361 agggaacaag aaagaagaca ccgccgttcg ttgaaggtga tgtttgactt gaagcgtgct
     6421 ttgggtaaat tcggtaggga aaagaagaaa agaatggagc gtcaaaggca ggcggagctt
     6481 gagaaagctt acggcaggcg ggtcatatcg ttcaaatagt ttgtgtaaaa tatagcggat
     6541 taaaattaga aatggataca ctgtcattcc cgcgcaggcg ggaatctagt ccgttgagtt
     6601 tcagtcattt ccgataaatc accgcaacgt taaatttcta gattcccgcc tgcgcgggaa
     6661 tggcggtggt gggatttctg tttttccgac aaattcctaa aacttaaagt tccgttattc
     6721 ccgcgaaaac agaaaaccaa aaatagaaac ctgaaaacag aaacctgaaa acagaaacct
     6781 aaaattcgtc attcccgcgc aggcgggaat ccagtccgtt gagtttcagt catttccgat
     6841 aaatcaccgc aacgttaaat ttctagattc ccgcttttgc gggaatgatg gcggagaggg
     6901 tttgttgttt cggataaatc cctgtagttt ttcgtttcta gattcccgct ttcgcgggaa
     6961 tgacgacacg ggaaatctta tttgaaccta ctatcttaat cggctgcaaa atgccgtctg
     7021 aacgggtttc agacggcatt tctgtttatg cgaaatcgcc ccaaagcgtc tgcatggcgg
     7081 cgagggcggc gagtggggcg gtttctgtgc gtaaaatccg tttgccgagt gtaaccgcct
     7141 gaaagccagc ttcaaatgcc tgttgttctt cctgttctgt ccagccgcct tcgggcccga
     7201 ccataaagac gattgcgccg gacgggtggc ggatgtcgcc gagtttgcgg gcgcggttga
     7261 tgctcataat cagcttggtg ctttcagacg gcattttgtc gagtgcttca cgatagccga
     7321 tgatgggcag cacgggggga acggtgttcc tgccgctttg ttcgcacgcg gagatgacga
     7381 tttcctgcca gcgtgcgagg cgtttggcgg cgcgttcccc atcgaggcgg acgatgcagc
     7441 gttcgctgat gacgggctgt atggcggtta cgccgagttc gacgcttttt tgcagggtga
     7501 aatccatgcg atcgccggag gagatggatt gtatcagtgt gatgttgagc ggggactcgt
     7561 tgtcggttgt gtcttcgtgc aggatttcgg cttcggcgcg gcgtttttcc aaaacggtca
     7621 gccgtgcggc gtgtgccttg cctttgccgt cgaagagggt gatgttttcg ttggggcgga
     7681 cgcgcaggac gttgaggtgg cggacgatgt tgtcgggcag ggcgacggtt tgtccgacgg
     7741 aaaggttttc gggcaggtgg aatcggggca tagtttttgg cggttcggac ggttataatc
     7801 tgtcgcagcg gcgtgatgga aacggac
//
LOCUS       DAWKOX010000091         7752 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.091, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000091 DAWKOX010000000
VERSION     DAWKOX010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7752)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7752)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7752
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.091"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            248..1783
                     /locus_tag="WJK78_001334"
     CDS             248..1783
                     /locus_tag="WJK78_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ7598257.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1780..1872
                     /locus_tag="WJK78_001335"
     CDS             1780..1872
                     /locus_tag="WJK78_001335"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ7598258.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(1908..3152)
                     /gene="lysA"
                     /locus_tag="WJK78_001336"
     CDS             complement(1908..3152)
                     /gene="lysA"
                     /locus_tag="WJK78_001336"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ7598259.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQNEKVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVEPKNIAPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVNGGGYKLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3163..3333)
                     /locus_tag="WJK78_001337"
     CDS             complement(3163..3333)
                     /locus_tag="WJK78_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ7598260.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            3404..3727
                     /gene="cyaY"
                     /locus_tag="WJK78_001338"
     CDS             3404..3727
                     /gene="cyaY"
                     /locus_tag="WJK78_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ7598261.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3758..4177
                     /locus_tag="WJK78_001339"
     CDS             3758..4177
                     /locus_tag="WJK78_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HEZ7598262.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCVNDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSREPT"
     gene            4199..4705
                     /gene="luxS"
                     /locus_tag="WJK78_001340"
     CDS             4199..4705
                     /gene="luxS"
                     /locus_tag="WJK78_001340"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ7598263.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            4851..7667
                     /gene="polA"
                     /locus_tag="WJK78_001341"
     CDS             4851..7667
                     /gene="polA"
                     /locus_tag="WJK78_001341"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ7598264.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSSETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHAELSDGIESLRRTTPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEMPFEKQAEKATAPEKLDYQA
                     VTTEAQFAALLDKLSRADTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QQAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPWDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGFVETLFGRRLYLPDIHNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLSECEASPWDELLQSKLIMQVHDELVLEVVETELDFVKEKLPQIMAK
                     VGGGLLDVPLVAEVGVGENWEEAH"
BASE COUNT         1797 a         2072 c         2096 g         1787 t
ORIGIN      
        1 agcttaaaat cctgcgggat tggtgtggga tttagggcta atctagtaca gcccctaaaa
       61 tttttcgttt tcaagccttc accgcttgcc atcagcgtta aattttttta cgataagcac
      121 atagattgta aacaatcggc cacaagccgg tttgtttttt cagaagacat tatccctgtc
      181 agacgctatt tctatatatt tcgcctataa tggcttgttt ttaataaata attcaagagg
      241 tatcaacgtg tctgattcca agacgaaaga acgcgccaca ttcggcacgc gccgcgcgtt
      301 tatgattgcc gccatcgggt ccgccgtcgg cttgggcaat atttggcgtt tcccctatat
      361 tgcttttgaa aacggcggcg gcgcgttcat cctgccctat ctggtcgcgc ttctgacggc
      421 gggcatcccg ctgctgctgc tcgattatgc catcggccac cgttaccgtg gttctgcgcc
      481 cttggctttc cgccgcctcg gacgatggtt tgagccggtc ggctggtgga acgtgatgac
      541 caatatcgtc atctgcatct attacgcggt aattatcggt tgggcggcaa gctataccta
      601 ttattcggtc aacgccgcct ggggtgcgga tccgcagggt tttttcttta aggacttcct
      661 gcaaatggcg ggcccggaag ccttgggttt ggattttgtc ggcaaagtcg ccggtccttt
      721 ggcgggcgtg tgggttttta ccgccgccat tatggcgttg ggtgtgcaaa agggcgtggc
      781 gcgcgcctcg tcgttcttta tgccgctgct tttggtgatg tttttgatta tggtcggcat
      841 ttcactaacc ctgccgggtg cggcaaaggg cttggacgca ttgtttacgc ccgactggtc
      901 gaaactcgcc gattccaagg tctgggtggc ggcatacggg cagattttct tttcgctttc
      961 catctgcttc ggcattatgg ttacctattc ttcttatttg aagaaaaaaa ccgacttggg
     1021 cggaacgggg ctggtggtcg gttttgccaa cagcagcttt gaactgctcg cgggcatcgg
     1081 cgtgtttgcc gcattgggct ttatggcgca ggcgggcggt aaggcggtca acgaggttgc
     1141 ctcaggcggc atcggtttgg cgtttatcgc ctttccgacc attatcaacc aggcaccgat
     1201 gggctggctg atcggcatat tgtttttcgg ttcgctggta ttcgccggcg ttacgtcgat
     1261 gatttccatc cttgaagtga ttgtggcggc gattcaggac aagctgaaca tcgggcgcgt
     1321 caacgccacg ctgctggtct gcattccgat gggcattgtt tccacgctgc tgttcggtac
     1381 ggcgacgggg ctgccggttt tggacgtgat ggacaaattc gtcaacacct acggcattgt
     1441 tgccgccggc tttgtttatg ttgccgccat catcatcagc ggcaggctgc cggaattacg
     1501 caagcacctg aacgctttgt cctccatccg catcggcggc ttgtggacgg tctgcgtcgt
     1561 ggttaccgtc gtgatgctcg gctatatgct gtttaaagat accagcggcc tgatggagaa
     1621 aaattacgaa ggttatccgg atggtttcct cagtattttc ggctggggga tgtcggcggc
     1681 gttggtcgtg ttcgggctgc tgctgtcgtt gctgccttgg aaacacggtc aggatttcaa
     1741 cgtcaaagac gaacacgaac atgaacaagg agaagaaaaa tgagtacttc cgccattgtg
     1801 atgatgattg tctcaatcgt gataatctgg ggagggctgc tgctttccct gttaaggctg
     1861 ccgaacgagt aagcctttag agcgttaaaa atgccgtctg aaccgcttca gacggcattt
     1921 tgatgttcgg cttgcaggca ggcgagttcg tttgccattt gctgttctaa ggtttcgcgt
     1981 cggcggatga gtttgtatcc gccaccgtta accaacactt ccgccgcacg gttgcgcgcg
     2041 ttgtaattgc tcgccatact ggctccgtat gcgcccgcgc tgcggataag cagcaaatcg
     2101 ccttcttcgc aggcgatggt gcggtctttg ccgaggaagt cgccggtttc acaaatcggg
     2161 ccgacgatgt tggcagtcag cggcgcgatg ttttttggtt ctaccgcttc gatgtgatga
     2221 taggcatcat atagggcggg gcgcattaaa tcgttcatcg ccgcatcgac catcacaaag
     2281 tttttctctt cgccgtattt gacgaattcg acacgcgtca acaacgcgcc tgcgttgccg
     2341 accaagctgc ggccgggctc aagaatgagt ttcagacggc gtgtgccgat cagtttttga
     2401 accgcttggg catacgcgcc caaatcaggc actttttcgt tttggtaaac aatgccgacg
     2461 ccgccgccta agtccaaatg ttccaaaaca atgccttcgg cggcaagcgc gtcaaccaaa
     2521 atcaaaatgc gttcgcaggc ttcgaccagc gggcttaagt cggttagttg ggagccgatg
     2581 tggcagtcga tgccgatgat tttcaaattg ggctgttgtg cggcatggcg gtaggcttcg
     2641 agcgcgtcgg cgtaggcgat accgaatttg ttggctttca aacctgtgga gatgtaagga
     2701 tgggttttcg catcgacatc gggattgacg cgcagggaga cgggcgcggt tttacccaaa
     2761 cgcgcggcaa ctttctgaat acggtcgatt tcggggatgc tttccatatt gaagcatttc
     2821 acgcctgcat tcagcgcgaa ctcgatttcc gcctcgcttt tgcctacgcc tgaaaatatg
     2881 gtttttgccg cgtcgccgcc tgccgccaaa acgcgtgcca attcgccgcc ggacacaatg
     2941 tcaaaaccgc tccccaaaga agcaaagtgt ttgatgatgc tcaggttgcc attggcttta
     3001 accgcatagc agacgagcgg ggagagctcg gcaaaggcag tttggtagtg ttcaaatgct
     3061 tcggtcagcg cggattggct gtacacataa agcggtgtgc cgaatgcttc ggcaaggcgg
     3121 gggtagggga cttgttcgca aaatagggtc atattttcgt tttcattttt gggttggagg
     3181 ggcggattgc ggtttgcctt gaagctgcaa accggtttgg attacgccga aacgcgcctt
     3241 gtcgccttct ttgggcaggt agaggtcgcc tttgtaaccg caggccgaga gcaggagggc
     3301 ggttgccgcc gcaaaaaata cgccgtattt catcggtaaa cttccttcat aagcgcgaat
     3361 gtggcaagat tcggcatctt aaacaaaaaa cacgcaaaaa gctatgatga ccgaaagcga
     3421 gtttatccgc gcgagcgaag cattatttga acacatcgaa gaccaaatcg acgaaaacgg
     3481 ctgggatttc gactgccggt ttgccggaaa cgtcctgacc atcgaagccg gagacggcac
     3541 gcaaatcatc gtcaaccgcc acacgcccaa ccaagaattg tggattgccg caaaaagcgg
     3601 cggctaccat ttcgccgaac aaaacggcaa atggctggca acgcgcgaca gccgcgattt
     3661 ttatgatgtt ttgaacgaag cactgagcgc ggcttcgggc gaagcggttg agattgagga
     3721 attgtgattc aatttgatat aaaaagattg ttacccaatg gcacaattac ctctatatcg
     3781 gactgccgaa atcggaaatt ttactgtcgg cacgcctaaa gttttagaat cattttccaa
     3841 acatatccct tatggtgtcg tctttgaaga cgacggcgac acgggctact tctatgctgc
     3901 ttcgcaagac gggattttag atgccttgca catctacaat gtcgaagatg tatccgacaa
     3961 acatatcccc aatcatgtct tgattttatg ggatgatgcc tgcaccatag ccgcattgtg
     4021 tgtcaacgac tacattcatg ccgtctatga ttttgtcgaa caggcaggat attgccgcaa
     4081 cggcttccct gaagcaggcg gcgaatgggt gaaagtcgaa aaccgcgtct tggatgatga
     4141 attgctggac aaaatcctat cccgagaacc tacataaccc tcacaaaagg atacccaaat
     4201 gcccctacta gacagtttca aagtcgatca cacccgtatg catgcccccg ccgtacgcgt
     4261 ggcgaaaacc atgaccacgc ccaaaggcga caccattacc gtgttcgacc tgcgcttttg
     4321 cattcccaac aaagaaatcc tgcctgaaaa aggcatccac acgctggagc atttgttcgc
     4381 aggttttatg cgcgaccact tgaacggaaa cggcgtggaa atcatcgaca tttccccgat
     4441 gggctgccgc accggttttt atatgagcct tatcggcacg ccttccgaac agcaggtcgc
     4501 cgatgcgtgg ctggcttcga tgcaggatgt tttgaatgtc aaagaccaaa gcaaaatccc
     4561 cgagttgaac gaataccaat gcggcactta tcaaatgcac tcgctcgccg aagcgcaaca
     4621 aatcgcgcaa aacgtgttgg cgcgcaaagt ggcggtgaac aaaaatgaag agctgacgct
     4681 ggatgaaggg ctgctgaacg cctaatccgc caaaaatgcc gtctgaacaa gggtttcaga
     4741 cggcatttgc cttttccgtt ataatccggg gttgtgcggg ggcgggtttt aagccggcat
     4801 cgtccttccc tatttttttc tgtcccttat cggttttaag cgggtttttt atgtccaaca
     4861 gacctacact cctcctcgtt gacggatcgt cctacctcta ccgcgcgtat catgcgatgg
     4921 ggcaaaacct gaccgccccc gacggcgcgc cgacgggcgc gctgtatggc gtattgaata
     4981 tgttgcgccg tttgcggtcg gaatatccgc acgattattg cgcggtggtt tttgatgcga
     5041 aaggcaaaaa tttccgccat caaatgtttg aagaatacaa ggcgacgcgc ccgccgatgc
     5101 ccgacgattt gcgcccgcag gcggaagcac tgccggattt agtgcgcctg acaggctggc
     5161 cggtattggt gattgggcag gtggaggcgg acgatgtgat cggcacgctg gcgaaacagg
     5221 gggcggaaca tggtttgcga gtcattgttt cgaccggcga taaggacatg gcgcagttgg
     5281 tggatgagcg cgttacgctg gtgaacacga tgagcagcga aacgctggac attgaaggcg
     5341 tgaaggcaaa attcggcgtg cgccccgacc aaatccgcga ttatctcgcg ctgatgggcg
     5401 acaaggtgga caacgtgccg ggcgtggaaa aatgcggccc gaaaacggcg gtgaagtggc
     5461 tggaagccta cggctcgttg caaggcgtga tagaacacgc ttcggaaatc aagggcaaag
     5521 tgggcgaaaa cctgcaagcc gcgctgcccc aactgccgct gtcgtatgat ttggtcacga
     5581 ttaaaaccga tgtggacttg cacgccgagc tttcagacgg catcgaaagc ctgcgccgta
     5641 ctacgccgaa atgggcgcag ctggttgtcg atttcaaacg ctggggcttc cgcacctggc
     5701 tgaaagaagc ggaatcaaac atgaataccg gctcgaccga tgatttgttc ggcagcgaca
     5761 gcatcggcga gcaggcggct ttgaatgcgg aaatgccgtt tgaaaaacaa gccgaaaaag
     5821 ccaccgcccc cgaaaaactg gattatcaag ccgttaccac cgaagcgcag tttgccgctt
     5881 tgttggacaa actgtcgcgg gcggacacaa tcggcatcga tacggaaacc acgtcattag
     5941 acgcgatgaa cgcctcgctg gtcggcatca gcatcgcttt ccaagcaggc gaagcggttt
     6001 acatccccgt aggacacagc ctgaccgccg cgcccgaaca gcttgatttg caagacgtat
     6061 taggccgtct gaaaccgcat ttggaaaacc ccgccctgaa gaaaatcggg caaaacctca
     6121 aatacgacca acacgttttc gctaactacg gcatcgccct gaacggcatt gccggcgacg
     6181 ctatgctcgc ttcctacatc atcgaaagcc atcttggaca cggcttggac gaattgtccg
     6241 aacgttggct gggcttggaa accattacct acgaatcatt gtgcggtaaa ggcgcgaagc
     6301 aaatcagttt tgccgatgtc gccatcgggc aggcgaccga atacgccgcc caagacgccg
     6361 atttcgcctt gcgcctcgaa gcgcacctgc gcgcgcaaat ggacgccaaa cagcttgaaa
     6421 tgtatgaaaa aatggagctg cccgtcgcgc aagtattgtt tgaaatggaa cgcaacggtg
     6481 tgcaaatcga ccgcgccgaa ctcgcccgcc aaagcgcgga actcggcgcc gagctgatga
     6541 agctcgaaca acaagcctac gccgccgcag gccagccgtt caacctcaat tcgcccaaac
     6601 agctgcaaga aatcctgttc gacaaaatgg gcatcccgac aaaagggctg aaaaaaactg
     6661 ccaaaggcgg catttccacc aacgaagccg tgctcgaaca gctcgcgccc gactaccccc
     6721 tgcccaaaat catcctgcaa aaccgcagcc tggcgaaact caaatccacc tacaccgaca
     6781 aactgcccga aatgatttct ccctgggata accgcgtgca taccacctac gcccaagccg
     6841 tcgccattac aggacgcttg gcaagcaaca accccaacct gcaaaacatc cccatccgca
     6901 ccgccgaagg ccgccgcgta cgtcgcgcct ttaccgcacc gcaaggcagc gtcatcgttt
     6961 ccgccgacta ttcccaaatc gagctgcgca tcatggcgca cctctctggc gacaaaaccc
     7021 tcatcgctgc gttccaaaac ggcgaagacg tacaccgccg caccgccgcc gaagtgttcg
     7081 gcatcgcccc cgaaaacgtc tcgtccgaac aacgccgcta cgccaaaacc atcaacttcg
     7141 gcctcattta cggcatgggc caatacggcc tcgccaaatc attgggcatc gacaacatct
     7201 ccgccaaaaa ctttatcgac cgctacttcg cccgctatcc cggcgtcgcc gaatacatgc
     7261 agcgcaccaa agaacaagcc gccgcacaag gctttgtcga aaccctgttc ggcagaaggc
     7321 tctacctgcc cgacatccac aacaaaaacg ccaacgcccg cgccggagcc gaacgcgccg
     7381 ccatcaacgc ccccatgcaa ggcaccgcct ccgacctcat caaacgcgcc atgatagacg
     7441 tgtcccgctg gctttcagag tgcgaagcct ccccgtggga cgaactctta caaagcaaac
     7501 tgattatgca ggtgcatgac gaactggtgc tggaagtcgt tgaaaccgaa ctggattttg
     7561 tcaaagaaaa actgccgcag attatggcga aagtgggcgg cggattattg gatgtaccgc
     7621 tggtggctga ggttggcgta ggggagaatt gggaagaggc acattgattg aaaggtgtta
     7681 tatgctatct ttatttaaat aaaatttaat ttttggtata ttttttctaa atgttcctat
     7741 agtatagtgg at
//
LOCUS       DAWKOX010000092         7729 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.092, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000092 DAWKOX010000000
VERSION     DAWKOX010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7729
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.092"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(354..776)
                     /locus_tag="WJK78_001342"
     CDS             complement(354..776)
                     /locus_tag="WJK78_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ7598265.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(894..1565)
                     /locus_tag="WJK78_001343"
     CDS             complement(894..1565)
                     /locus_tag="WJK78_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEZ7598266.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVWRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     RAAKP"
     gene            complement(1581..2207)
                     /locus_tag="WJK78_001344"
     CDS             complement(1581..2207)
                     /locus_tag="WJK78_001344"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ7598267.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDIAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2314..3132)
                     /locus_tag="WJK78_001345"
     CDS             complement(2314..3132)
                     /locus_tag="WJK78_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7598268.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGTVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3391..3831)
                     /locus_tag="WJK78_001346"
     CDS             complement(3391..3831)
                     /locus_tag="WJK78_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ7598269.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSETSVLLACGGNLPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3894..5300)
                     /locus_tag="WJK78_001347"
     CDS             complement(3894..5300)
                     /locus_tag="WJK78_001347"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ7598270.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAALVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEDYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5471..6586
                     /gene="lptF"
                     /locus_tag="WJK78_001348"
     CDS             5471..6586
                     /gene="lptF"
                     /locus_tag="WJK78_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ7598271.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRNSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLSLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLVYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVDKSLTLKGGK"
     gene            6583..7653
                     /gene="lptG"
                     /locus_tag="WJK78_001349"
     CDS             6583..7653
                     /gene="lptG"
                     /locus_tag="WJK78_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ7598272.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRFFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
BASE COUNT         1672 a         2101 c         2034 g         1922 t
ORIGIN      
        1 aaggcgaggc aacgccgtac tggtttttgt taatccacta taattcaata aattaatata
       61 tggcttaaaa taacgggatt ctcgcctccc gcccgcccgc agaagcaggc gggtatcatt
      121 ttaaaacgcg gcatttaaaa tttgaccgaa aattgttgac aatccggaat caagtctgca
      181 caataccccg acaagtccaa gtattataaa ggctgaataa agaggaaaca gcaggcagat
      241 atattcggga ggtgcagtcc gaatatatct gcttttttat gcgcctccgg attgcctgcc
      301 gcacctttcc cttcagacgg tatcagccgt ttccccataa tgccgcccga tgcctattta
      361 tctgccccgg caatttcaaa actgtgggta atctttgccg ctttgcccaa cataatcgaa
      421 gccgaacagt atttttcggc agacatctga acggcgcgct caatggccga ttctttcaaa
      481 tcatgcccga atactttgaa atggatgtgg atttcggtaa acacgcgcgg cgcatcgtcc
      541 gcccgtttcg ccgtaaccgt cgcacggcag tcagtcactt tctgacgctg tttttcggca
      601 atcatcacca catcgatgct cgaacagccc gccacgccca acagcagcat ttccaaaggg
      661 ctgggcccgc gcttggccgc accttctgcc gccgaaccct ccataacgac gctgtgcccg
      721 ccttccgtcg tgccgacaaa gcacattccg tctatccatt ttgatgtaac ctgcatggtg
      781 tcattcctga aaatagcgtt aaaaccgctt tgcatatggc gttattgtaa acaatttcaa
      841 gcggcttatg cagaaatatg gacaaaacgg caaaaaaaca cttgaaaacc gatttacggt
      901 ttggctgccc ggccgttgat ctgcaccgat ttgagtttca gcgtataggt tttgccgtcg
      961 tcggtatagc cgatttgtgc cggaatattg ttcagggacg gtgcgaagaa atacattacc
     1021 gtatcgtcgc cgcgccacac ccgatatttg acgacttcgg tttccacgcc gcctatgctg
     1081 tattttcctg tacccgcctt attcaaaccg ccgacggaat aaagtttttt gccgttggtg
     1141 attttcagcc ccggggggag tttcgcgtca tttgccgcca actgccaggc aagcgtgaac
     1201 aaatccatag ccttggggct ttgctcggtt ttgctctcgc ccgctttgcc gtaggttacg
     1261 ctgccgtcgg cgaatttggc ttccgcatac agtttgcccc tgcgtatgtc tctatagtag
     1321 gtagggtgca gggtattgcc gacaaccgta ccgccggact cgaaacggat attgtatagc
     1381 ggcactttaa tcgtcgaaac gattttgtaa gcattgccgc tgcgttcaaa tgtcatcgtg
     1441 gcgggaatgc cgtagctgcc ggaatagtgc agcacggcgg attggggcag ccctgccgca
     1501 tacgcgcacg gcagggcggc ggacaaaatg gcggcggaaa atatattttt aaaagtcttc
     1561 atcatttgct cccgcccggt ttacgccgtc aggaaacggg cggcatcggc gttttccgaa
     1621 tttctgacgc ggtttccctc gataatcagg cggccggcgg caaaatcggc aacggctttc
     1681 ggatagagtt tgtgttcgac agccaaaacc cgggcggcaa tatcgtctgc cgtatcacca
     1741 tcaagtatcg gcacaatccc ttgcgataca atcgggccgc aatccagctc ggccgtaaca
     1801 aagtgaatcg tacagcctgc aacgcggcaa cccgcttcca aagcgcgttc gtgcgtatga
     1861 agcccagtaa atgaaggcag gatggacgga tggatgttca tcagcctgcc ttcgtaatgg
     1921 gcgcaaaact cgggggtcag aatccgcata aaacctgcca aaaccaccaa atcgggttga
     1981 tatgcgtcga ttttttccat catggccgta tcgaaggcaa gtcgtgattc aaagttttta
     2041 tgattcaggc tatcggtcgg gatgccgcgt tcggccgccc attgcaaacc ggcagccgtt
     2101 tcgctgttgc tcaacacggc ggcaatgcgg acgttgggaa tggcggcatt gacgattgcc
     2161 tgcatattgc tgccgcgtcc ggaaatcagg atgacgatgt ttttcataat ggtacgcttt
     2221 tgaaagggat gccgtctgaa ccgctgtttg gtggtttcag acggcatttg ccgtaaaaat
     2281 gcccgaaaac ctgtttcggg catggattcg gacttaattt acttttttga tgtcgacttg
     2341 agccggctgc ttggcgggcg cgttttcggg tgcgccgatt ttgaccagtt tcacatcaaa
     2401 taccaaagtg gcgttcgggc cgattttgtc gcccgcaccc tgttcgcggt aggcaaggtt
     2461 ggacgggatg tagaacgtgg cttcgccgcc ttctttcaga agctgtacgc cttcggtcca
     2521 acccggaatc acttggctca aagggaaggt gaccgtgccg ccgttggctt tgctgctgtc
     2581 gaataccgta ccgtcaatca ggcggccttc gtattccacg gtaacgatgt cgtctttggt
     2641 cggctgtttg ccttcaccct gtttggtgat tttgtattgc aggccggaag cagtggtctt
     2701 cacgccgtct ttggcggcat tttctttcag aaaggcttcg cctttttctt tattggcctt
     2761 cgcgtccgcc ttgtgttttt ctacggcttt agcctgttgt tcctgaagga atttcatcat
     2821 gacttcctga gcctgctctt cggtcatttt gatttctttg ccgtcataca ctgcctgcat
     2881 ggcttcggta aagactttca aatcgatttc cgcgccctgt tccttcattt gcttcaggga
     2941 gcgtccgatg tccacgccca tcgcatagct tgcctgctgc atcgtgctgc cgatcgaaga
     3001 ggtgtcgccc tgcgcggaag aagcggcggc aggttcggat gcagatgcgg gggcggcttc
     3061 ttttttgccg caggcggaaa gtgccaaagc ggcggaaagg gtcagtgcgc tgattttgaa
     3121 aatggtgttc atgatggatc ttcgctgtcg ataaggtcgg aaaaacggga ttatagccga
     3181 gtttgaatgt ttcaacacac aggatgacac ataaagcgtc aatcgtgtgt tgccctgttt
     3241 tggaagggat tgaaccttcc aaaataagtt ttgattctac cgccccgagg gacagatgtc
     3301 caagtggcgg ggttcaaccg ataaggaaat tttaatcaaa tagaatcaag cctgtttaaa
     3361 ttttgtaaat gcggcatttc agacggcatt ttatgccttg ccctccatgc cgtgatgttc
     3421 gatggcaaaa ccgcttcggc ggtaggcggt aaagcgttcg cgcgcgtcgg cgagatcttc
     3481 caagctgttg ccgacgattt ccaaaacgcg cgcgggcaag accggagcgg tgttccaaaa
     3541 accgtcggac aggttcaaaa cggtcatgcc ttcgggaatt cggggcagat tgccgccgca
     3601 ggcaagcagg acggatgttt cagacggcat ggcttcttcc gtttcccaaa tttcgtgcgg
     3661 aatgaaactc tcggcctcgt attgccaaag cattttgtcc aattcctgaa gctgcccgaa
     3721 cgaatcggac cacaccagta tcctgccgcc gtcccgaatc gcacgggcaa tcaggcggca
     3781 ggtgaaaatc ggaacttggg caacgtgcgt gtaaaaggtg gctttcggca tattgtttga
     3841 acatttggca ggataatgcc gtctgaaagg cttcagacgg cattgtggca aaattaaaga
     3901 ttccgcagat agttcagcag caagggaacg ggacggccag tcgcaccttt ttccgcaccg
     3961 gatttccacg ccgtacccgc gatgtcaagg tgtgcccatg gatagtcttc ggtaaagtag
     4021 gataggaatg ttgcggcggt aatcgtgccc gcgccgggcg tgccgatgtt tggaatgtcg
     4081 gcaaagttgg atttgagttg gtctttgtag gtctcaaaga gcggcagttg ccatgctttg
     4141 tcgtccacgt tgtaggaagc ggcaagcagg ctgtcgatca aatcctgatt gttgcccatc
     4201 acgccgctga catcgtgccc caaggcgacg atgcatgcac cggtcagggt ggcgacgtcg
     4261 atgacggctt tgggtttgaa ctgctcggcg taagtgagcg cgtcgcacaa aatcagacgg
     4321 ccttcggcat cggtgttcaa cacttcgatg gtcagacctt tcatactttt cacgacatcg
     4381 cccggtttgt ttgccgcgcc ggaaggcata ttttcacaag tggcgacgac ggcaatcagg
     4441 ttaatcggca gttgcagttt gacggcggcg cagaaggtgc tgatgacggt tgccgcgccg
     4501 cacatatcaa acttcatttc gtccatgttc aggccgggct tgagggagat gccgccggtg
     4561 tcgaaggtaa tgcctttgcc gaccaatacc acaagcgcgg cttctttgtc ggctgcaccg
     4621 aaatagctca gttcgaccaa atagggggct tccgcgctgc ctttggcgac cgaccaaaac
     4681 gaacccatgt tttctttgat gtagtctttt tcgatgattt tggcgtgcgc gcccagtttt
     4741 tcggcttcgg ctttggcggt gcgcgctaaa aattcgggcg tgcattcgtt gggcgcggcg
     4801 ttgcccaagt cgcggcagag gctttgtccg taaacttgcg cttcggcgac gcgcaaggct
     4861 tctttaacgg cggcttcgtg tgcgctgtgg aacacggcgg tttcaaattt tgcgggcttg
     4921 gcttcttttt tgtagcggtc gaaacggtag gcggcgttgc cgaacgcaat cgcaaacgct
     4981 tcggctacgg cggcggcttg cgcttcatcg aaggcatgga tgtccacatt gaccgtttcc
     5041 tgattttgcg cccatttggc ggcttcggcg gcggccttgt tcaatgcggc gcggccggtg
     5101 cttttcagac agcatacggc aacagcctgc aaaccgttgc ctgtcgggat tttggtgtcg
     5161 gcaaaatttt gaccttcttc aagcgaagac aaaagggcaa gggcggtcgg atggtttaat
     5221 tgcgcctctt cggtgcagac aaataactgt gcgcctgcct gctgttcctg caagatttcg
     5281 gtttttgtgc taaattccac gtttattctc ctgattgaga cggttgtcgg tagttttcgg
     5341 acggcctttc gctcaaaaga ccgtctgaag acggctggca cgattgtacc ccatttgaag
     5401 caccgtctga aaccttgcgc ggacaatccg cctgcgccga accgcttacc gcccccctga
     5461 ccgcgattct atgatttatc aaagaaacct catcaaagaa ctctctttta ccgccgtcgg
     5521 cattttcgtc gtcctcttgg cggtattggt ctccacgcag gcaatcaacc tgctcggccg
     5581 tgccgccgac gggcgtgtcg ccatcgatgc cgtgttggca ttggtcggct tctgggtcat
     5641 cggtatgacg ccgcttttgc tggtgttgac cgcatttatc agtacgttga ccgtgttgac
     5701 ccgctactgg cgcaacagcg aaatgtcggt ctggctatcc tgcggattgg cattgaaaca
     5761 atggatacgc ccggtgatgc agtttgccgt gccgtttgcc gttttggttg ccgtcatgca
     5821 gctttgggtg ataccgtggg cagagctacg cagccgcgaa tacgctgaaa tcctgaagca
     5881 gaagcaggaa ttgtctttgg tggaggcagg cgagttcaac agtttgggca agcgcaacgg
     5941 cagggtttat tttgtcgaaa ccttcgatac cgaatccggc atcatgaaaa acctgttcct
     6001 gcgcgaacag gacaaaaacg gcggcgacaa catcatcttc gccaaagaag gtaacttctc
     6061 gctgaacgac aacaaacgca cgctcgaatt gcgccacggc taccgttaca gcggcacgcc
     6121 cggacgcgcc gactacaatc aggtttcctt ccaaaaactc agcctgatta tcagcaccac
     6181 gcccaaactc atcgaccctg tttcccaccg ccgcaccatt ccaaccgccc aactgattgg
     6241 cagcagcaat ccccaacacc aggcggaatt gatgtggcgt atttccttga ccgtcagcgt
     6301 tttgttgttg tgtctgcttg ccgtgccgct ttcctatttc aatccgcgca gcggccacac
     6361 ctacaacatc ctgattgcca tcggtttgtt tttggtttac caaaacgggc tgaccctgct
     6421 ttttgaagcc gtggaagacg gcaaaatcca tttttggctc ggactgctgc ctatgcacat
     6481 catcatgttc gtcatcgcaa tcgtacttct gcgcgtccgc agcatgccca gccagccctt
     6541 ctggcaggcg gttgacaaaa gtctgacatt gaaaggcgga aaatgaacct gatttcacgt
     6601 tacatcatcc gtcaaatggc ggttatggcg gtttacgcgc tccttgcctt cctcgctttg
     6661 tacagctttt ttgaaatcct gtacgaaacc ggcaacctcg gcaaaggcag ttacggcata
     6721 tgggaaatgc tgggctacac cgccctcaaa atgcccgccc gcgcctacga actgatgccc
     6781 ctcgccgtcc ttatcggcgg actggtctct ctcagccagc ttgccgccgg cagcgaactg
     6841 accgtcatca aagccagcgg catgagcacc aaaaagctgc tgttgattct gtcgcagttc
     6901 ggttttattt ttgctattgc caccgtcgcg ctcggcgaat gggttgcgcc cacactgagc
     6961 caaaaagccg aaaacatcaa agccgcggcc atcaacggca aaatcagcac cggcaatacc
     7021 ggcctttggc tcaaagaaaa aaacagcatt atcaatgtgc gcgaaatgtt gcccgaccat
     7081 accctgctgg gcattaaaat ctgggcccgc aacgataaaa acgaactggc agaggcagtg
     7141 gaagccgatt ccgccgtttt gaacagcgac ggcagttggc agttgaaaaa catccgccgc
     7201 agcacgcttg gcgaagacaa agtcgaggtc tctattgcgg ctgaagaaaa ctggccgatt
     7261 tccgtcaaac gcaacctgat ggacgtattg ctcgtcaaac ccgaccaaat gtccgtcggc
     7321 gaactgacca cctacatccg ccacctccaa aacaacagcc aaaacacccg aatctacgcc
     7381 atcgcatggt ggcgcaaatt ggtttacccc gccgcagcct gggtgatggc gctcgtcgcc
     7441 tttgccttta ccccgcaaac cacccgccac ggcaatatgg gcttaaaact cttcggcggc
     7501 atctgtctcg gattgctgtt ccaccttgcc ggacggttct tcgggtttac cagccaactc
     7561 tacggcatcc cgcccttcct cgccggcgca ctgcctacca tagccttcgc cttgctcgcc
     7621 gtttggctga tacgcaaaca ggaaaaacgc taaaccaatg ccgtctgacc cccttcggac
     7681 ggcattggtt tttattatca tattcctgta gacagatagc cgttcccta
//
LOCUS       DAWKOX010000093         7669 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.093, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000093 DAWKOX010000000
VERSION     DAWKOX010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7669)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7669)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7669
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.093"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            28..1143
                     /gene="asd"
                     /locus_tag="WJK78_001350"
     CDS             28..1143
                     /gene="asd"
                     /locus_tag="WJK78_001350"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ7598273.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHS
                     QALTLKLKKDLPISEIEAILAGANDWVKVIPNEKEASIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            complement(1236..1766)
                     /locus_tag="WJK78_001351"
     CDS             complement(1236..1766)
                     /locus_tag="WJK78_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ7598274.1"
                     /translation="MESFELEDLTLWLVRDADEAEMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLQTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVPEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(1776..2120)
                     /locus_tag="WJK78_001352"
     CDS             complement(1776..2120)
                     /locus_tag="WJK78_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598275.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPTWALVWLLICLPCLLIASKCLGWKGWRLLANVLACLAVCALLSVPAA
                     LLIAFTLQDLLK"
     gene            complement(2107..2886)
                     /gene="xth"
                     /locus_tag="WJK78_001353"
     CDS             complement(2107..2886)
                     /gene="xth"
                     /locus_tag="WJK78_001353"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ7598276.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIATSGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFDR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            complement(2969..4390)
                     /locus_tag="WJK78_001354"
     CDS             complement(2969..4390)
                     /locus_tag="WJK78_001354"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ7598277.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFG
                     NTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPPADPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQL
                     AGRLKALGGIIGLLQRDPTEFLQGGVASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            complement(5078..6127)
                     /locus_tag="WJK78_001355"
     CDS             complement(5078..6127)
                     /locus_tag="WJK78_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ7598278.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDACMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            complement(6210..7364)
                     /gene="obgE"
                     /locus_tag="WJK78_001356"
     CDS             complement(6210..7364)
                     /gene="obgE"
                     /locus_tag="WJK78_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ7598279.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTG
                     ENVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGEARSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQTRTAAFLEAVGWDSPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEQAAAKAEIAEQQPKTDTGVFKPE"
BASE COUNT         1765 a         1980 c         1906 g         2018 t
ORIGIN      
        1 acgatttttt cctcaaggag caacacaatg aaagtaggtt tcgtcggctg gcgcggtatg
       61 gtcggttcgg ttttgatgca gcgtatgaaa gaagaaaacg acttcgccca cattcctgaa
      121 gcgtttttct ttaccacttc caacgtcggc ggcgcagccc ctgatttcgg tcaggcggct
      181 aaaacattat tagatgccaa caatgttgcc gaactcgcca aaatggacat catcgttacc
      241 tgccaaggcg gcgattacac caaatccgtc ttccaagccc tgcgcgacag cggctggaac
      301 ggctactggg ttgacgcggc atcttctctg cgcatgaaag acgacgcgat tatcgtcctc
      361 gaccctgtca accgcaacgt tatcgacaac ggcctcaaaa acggcgtgaa aaactacatc
      421 ggcggcaact gcaccgtctc cctgatgctg atggctttgg gcggcctgtt ccaaaacgat
      481 ttggtcgaat gggcaaccag catgacctac caagccgctt ccggcgcagg tgcgaaaaac
      541 atgcgcgaac tcatcagcgg tatgggcgcg gttcacgccc aagtggcgga cgaacttgcc
      601 gatcctgccg gctcgattct cgacatcgac cgcaaagtat ccgatttcct gcgcagcgaa
      661 gactatccga aagccaactt cggcgtaccg ctcgccggca gcctgattcc gtggattgac
      721 gtggatttgg gcaacggcca gtccaaagaa gaatggaaag gcggcgtgga aaccaacaaa
      781 atcctcggcc gcagcgacaa tccaaccgtg attgacggcc tgtgcgtccg catcggctct
      841 atgcgctgcc acagccaagc ccttaccctg aagttgaaaa aagacctgcc catttccgaa
      901 atcgaagcga ttttggcagg cgcgaacgac tgggtgaaag tcatccccaa cgaaaaagaa
      961 gccagcatcc gcgagctgac ccccgccaaa gttaccggca cgctgtccgt ccccgtcgga
     1021 cgcatccgca aactgggtat gggcggcgaa tacatcagcg cgttcaccgt cggcgaccag
     1081 ctcttgtggg gcgcggccga gccgctgcgc cgcgtattgc gtatcgtgtt gggcagcctg
     1141 taagccctgt ttgaatggaa atgccgtctg aagcctgttt cagacggcat tttccttgca
     1201 accccagtta accgaaattc cgataaggca agcgttcacg ccagcaacat ttcctgcatc
     1261 agcttcatac cccactgcca gccgccgagc atgccgttca aactgcccga atgcggggaa
     1321 accaacaggc gggcgttcca caaatccgcc tgtttttgcg cccaaccgtg cggcacgccg
     1381 ccgtgttcgg gtacaaccaa tgcggcacgg cagggacagc ggacgcgttg gaaagtgtgt
     1441 tccgcatcgt cgggaaaaat atcgggacgc tgcggtacaa ggatgatgtt ggcaattttc
     1501 ttccgtgtca ggatgtctgc ctgatacagc cacgccaaaa atgcggccgc gcccgcaccg
     1561 tgtgcgacaa cggcgacgta tttgccgcgt atgcgttcaa atgccgtctg aagccctgcc
     1621 tgccattccc ctatgctttg accggccgac gcttcggaca tctgcacgac gggataactg
     1681 atcgcccagc ggtctatcca catttccgct tcatccgcat cgcgtaccag ccacagcgtc
     1741 aaatcctcaa gctcgaaact ttccattgtc cgcgcctatt tgagcaggtc ttgcagcgtg
     1801 aacgcaatca gcagcgcggc aggcacactc aacagagcgc acacggcgag gcaggcaaga
     1861 acgtttgcca acagccgcca gcctttccaa cccaaacatt tggacgcaat cagcaggcag
     1921 ggcaggcaga tcagcagcca caccaacgcc catgtcgggt ttgccttggt cggcgcaagc
     1981 cagccttgca tccgcgacaa cataaatatc gcccacacca atatgggcag gataaacgca
     2041 gcgacaaccc atgctgcgcc tattcctgtt tttccgtcca cattccaatc atatttaccc
     2101 aaaactttat tcggcagcat agtcatactc catgaccagc ggcgcatggt cggaaaattt
     2161 ttcatcttta taaacgtgtg cggacacggc tttggcggca agttcgggcg taaccatctg
     2221 ataatcgatg cgccacccga catctttcgc atacgcctgc ccgcggttgc tccaccacgt
     2281 gtagcccggc acatcgggat aaagcgtgcg ccacatatcc gtccaaccga gcttgtggat
     2341 aaccttgcct atccactcgc gttcttccgg taggaagccc gaatttttct gattgccttt
     2401 ccagtttttc aggtcgatgt tttggtgggc gatgttccag tcgccgcaaa cgacaatgtc
     2461 gcgtccttcg tttttcatcg cttcgagcat agggtaaaac gcatcaagga aacggtattt
     2521 cacctgctgg cgttcttccg cgctgctgcc gctgggcaag taaagcgaaa taacgctcaa
     2581 cctgtcgaaa tcgcaacgca caaaccgccc ttccctgtcg aattcttcaa tgcccatacc
     2641 gatttgcaca ttgtcgggtt tgcgtttgct gtacaccgcc acgccgctgt aaccgcgctt
     2701 ctcggcgcaa tgccaatggc cgtgcatccc gtgcggattt ttcatatcgg cagacaaatc
     2761 agcctcctgc gctttgagtt cctgcacgca gacaatgtcc gcgcccgatg tggcgatgta
     2821 ttcgtaaaaa ccttttttgt aggcggagcg gatgccgttg acgttggcgg aaatgatttt
     2881 aagcataata aaaataagtt ctcacaataa aaatgccgtc tgaacaaaaa agggcaaaat
     2941 gcggcacatt tacccttttc gatggatttt aaccgcgccg ccaagtcgtg ccgccggcgt
     3001 tgtcttccaa aatgattttg tgttcgttca gaaggtcgcg gatgcggtcg gattccgccc
     3061 agtttttatc ggcgcgcgcc tgtttgcggc gggcgatcaa gtcttcgatt tcttcgttgg
     3121 agagaccgtc tgaagccacg ccgccttgca ggaactcggt cggatcgcgt tgcagcagtc
     3181 cgatgatgcc gcccaaagcc ttcagacggc ctgccagttg cgcgttattg gttttgttca
     3241 cttcgccggc aagttcgaac aacaccgcca ccgctttcac cgtatcaaaa tcatcattca
     3301 tcgcaacata aaagcggcgc gtgtagtcat cgccggcttc agacggcatc ggatcggcgg
     3361 gcggcgtatt tttcaaagtc gtatacaaac gcgtcaacgc gccttttgcg tcgtccaaat
     3421 gcgcgtcgga atagttcaac gggctgcggt agtgggcgcg caggatgaag aagcgcacga
     3481 cttcggggtc gtattgtttc aacacttcgc ggatggtgaa gaagttgccc agtgatttgg
     3541 acattttttc gccgtccacg cggataaagc cgttgtgcag ccaatatttg acgtggctgg
     3601 cgatgctttg cccgtggtgg gtttgcgcgt gatgatgacc gcaggtatgc cccgtcgcgc
     3661 cgacgctttg ggcaatttcg ttttcgtggt gcggaaactg caaatccgcg ccgccgccgt
     3721 ggatgtcgaa ggtattgccg aacaggtttt cactcatggc ggagcattca atgtgccagc
     3781 ccggccgtcc cctgccccaa gggctttccc acgccggttc gcctgctttc gccgctttcc
     3841 acaacacaaa atcaagcgga tcgcgtttga aaccgtccac ttccacacgc tcacctgcac
     3901 gcaggtcgtc taacgatttg cccgataatt ggccgtaagc ggcaaactcg cgcacggcgt
     3961 agtaaacgtc gccgttggcg gcaggataag ccttgccgtt ttgaatcagg gtttcaatca
     4021 tcgcaatcat ttgcggaatg ttttccgtcg ccttcggctc gatatcggga cgcaacacgc
     4081 ccaaagcatc ggcatcttcg tgcatagcct gaatgaaacg cgcagtcagc tcgccgatgg
     4141 tctcgccgtt ttcagccgca cgggcaatga ttttgtcgtc gatgtcggtg atgttgcgta
     4201 cataagtgag cggatagccg cactcgcgca accaacgggc aatcatgtca aacaccacca
     4261 tcacacgggc atggcctaag tggcaatagt cgtaaacagt catgccgcaa acgtacatac
     4321 gcacgttttc agggtcgatg ggggcaaagg gttctttttg gcgggtaagg gtgttgtaga
     4381 tggtggtcat gggactatgg attaatcttt gttgctcgga tgataatttc tgttctgttc
     4441 ctgtagatac ggaccaagga acattacgta gttgcggatt attaatatgg ctgatatttg
     4501 tgaaaattgg ttctgcataa cagtttgcaa aattttttgt aaattctgat aatttaaact
     4561 tatcttttaa taagtttgct aaatctgatg acgagggata aagtttactt cttatactag
     4621 gcatttcaat atgaaggact atttttattt cgttacaatc taaagccaag cgagaaaaat
     4681 ctttttcttc ctgtttttct gctttaaatt tagcagaaac caatcctgcc aatgaatctc
     4741 gaatttttct tgcgattaaa tatggtaggt cagaaagttt ttcatctatt gattgggcat
     4801 ttggctcaag cccaagtcgg taataatctt taatttcgat tagccaaagt gtcgattcat
     4861 gaagggctat tatatctaca cctgagctgc cattatcgtc atctacactt tgatttatcc
     4921 cgttctttcc cttttcattt gtatcaattt tattacgtaa attacaactg ttctgaaaaa
     4981 ttttataatg ttcccattcg tcatacttgg taacgtaata atcttcagga aaagcaaagg
     5041 ttaatctctt ttctgtgatt gtagtcatag cttaacctca aatattcaga tacctgtctg
     5101 cctgcataat gttttcatct aacaatatca atgtgttcaa atcattaata ctgttccctt
     5161 gctccacttt tgttccatca tcggaagcaa tcaacgagaa aaaacgtaca ggtaaatccg
     5221 tgttattttc aagcttcaaa agttccaatt ctctcaataa gaataaagag tgtgttgcaa
     5281 taaaaacctg aataccctgt tgagataaag accaaataat acgggcagcc actttgatca
     5341 atttaggatt cagattagct tccggttcat cccaaaatag atagccttta tccagcaatg
     5401 cccctgttgc gattaaccgg gcaatcatga caaatttccg caaaccctct gctaccaaag
     5461 gtgcttcaat cttaccgccc gtatttgtca gcgatagata aaaccttcct tgttcttcag
     5521 atacttttcc gcccatcgcg ttctcaatag gttcgagcaa ttctcgaatt tttgtttctc
     5581 tggggccttt ggcaagcggg tgatttaatt gcatacaggc atcaaaccaa gtttcttcga
     5641 aagggatgct ttggttttga tacaaagaag tgaaccaagg gcaaagtgta attaattcgc
     5701 ggctgggtaa gaagataggt gtcggagtat attcattttc tttcaatccg atgctttgaa
     5761 cattgacttg cgatgatgag ttactggaaa aattcagact actatgcgta gtgccgtttt
     5821 gcagttttaa aacgatttcc gtacgcccgc gcccctgcaa acgtttgctc aacctgccca
     5881 aggaatcggg acggaaaaca ttcagtaatt tatcggcaaa acttttttgc aattctgttt
     5941 tcagtaatct gtttttggtg ttagatgtta cttctagcag gctgtataaa atttttaaca
     6001 aatgtgtttt gccacaaccg ttttcggcaa caataacatt gagattttca gaaaattcaa
     6061 aagtatcgtt tggaagaacg gtaaagtttg tcaactcaag cgactggata tattggttag
     6121 atgacatttt taatccattt caatcttgct ttaaaattgt ttcaaacaac cttttgtaga
     6181 acaaatatcg tctgaaaccc tttctttttt cactccggct taaacacgcc cgtatccgtt
     6241 ttcggctgct gctcggcaat ttcggctttt gccgctgcct gttccgcttc tgctttttcg
     6301 gcttcgatac gttttttctc ggtcaggtat tggttgattt ggtgtaccaa ttcctgcgtg
     6361 ccttggtggg tcagcgcgct gatttggaag aggcgcgggg tttccatgtc aaattggaaa
     6421 cggtcgtcgg gtttggggga gtcccagccg acggcttcga ggaaggcggc agtgcgcgtt
     6481 tgggcttctt cttcgtcaag catgtcgagt ttattcagca ccagccagcg cggtttgccg
     6541 taaagttctt catcgtattt gcgcaattcg ttgatgatgg caagtgcttc ttcggccggg
     6601 ttgacggttt cgtcgaaggg cgccaaatcg acgacgtgca gcaataatcc ggtgcgcgat
     6661 aagtgtttga ggaaacgatg ccccaaaccc gcgccttctg ccgcgccttc aatcaggccg
     6721 gggatgtcgg ccatcacgaa gctgtggttt tcgtcgatgc gtaccacgcc taagtttgga
     6781 tgcagggtgg tgaaggggta gttggcgatt ttggggcgtg cggcggatac ggcggtaatc
     6841 agggtggatt tgccggcgtt gggcataccc aataagccga catcggcgag gactttgagt
     6901 tcgagttgca gggaacgggc ttcgccttct tcgccgggcg tggattgttt tggggcgcgg
     6961 ttgacggagg atttgaagtg gatgttgccc aagccgcctt tgccgccttt ggcaaggcag
     7021 acgcgctgtc cgtgataagt gaggtcggca acgttttcgc cggtgtcgag gtcgcggata
     7081 agggtgccga cgggcatttt gaggacgatg tcgtccgcac ctgcgccgta acggtcggaa
     7141 ccgtggcctt tttcgccgtt tttggcttgg tagcgtttaa cgaagcggta ttcgacgagg
     7201 gtgttggtgt tttcgtcggc ttctgcccaa acgctgccgc ctttgccgcc gtcgccgccg
     7261 tccggaccgc cgcgcggtac gaatttttcg cggcggaaac tggttgcgcc attaccgcct
     7321 ttgcctgcgg cgacttcgat ttttgcttcg tcgatgaatt tcattcaatg ctcttgtttg
     7381 ttggtttcaa atgggggttc agacggatta ccgtgtgttt tgatgccgtc tgaacagaat
     7441 ttcggacgct attataaggg ataagcggta tttcaacacg ccgtacccaa actatttgtt
     7501 ccgcccatct taatgaattt ttaagcaaat cttcagcctg caaacaaaat tatgtccaac
     7561 ttctttggta caatcgcgcc tttttgacat tccgacccga cggaatgtcc gttcaaaccg
     7621 ttacatataa taagttttgg ggctgtccta gataactagg ataaactcg
//
LOCUS       DAWKOX010000094         7651 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.094, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000094 DAWKOX010000000
VERSION     DAWKOX010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.094"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(303..2339)
                     /locus_tag="WJK78_001357"
     CDS             complement(303..2339)
                     /locus_tag="WJK78_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ7598280.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDGGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLACRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDSVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPRIDALLRHSGFDNAA"
     gene            complement(2427..3299)
                     /locus_tag="WJK78_001358"
     CDS             complement(2427..3299)
                     /locus_tag="WJK78_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ7598281.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKTVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            3569..5959
                     /gene="gyrB"
                     /locus_tag="WJK78_001359"
     CDS             3569..5959
                     /gene="gyrB"
                     /locus_tag="WJK78_001359"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ7598282.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASAETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            6058..7443
                     /locus_tag="WJK78_001360"
     CDS             6058..7443
                     /locus_tag="WJK78_001360"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEZ7598283.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLVGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNILGNQVLPKHPNSLRFTAYASDGIVLKEQVYYSVGGGFVVTEEDFDRQAETEK
                     AVPYPYTSCAELLARCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(7514..7612)
                     /locus_tag="WJK78_001361"
     CDS             complement(7514..7612)
                     /locus_tag="WJK78_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ7598284.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
BASE COUNT         1727 a         2137 c         2171 g         1616 t
ORIGIN      
        1 cctgattttt gttaatccac tataaaatgc cgtctgaagc gttgtttgac cgtttcagac
       61 ggcattttta tcaaattcaa aaatattccg tcattcccgc gaaagcggga atctagaacg
      121 taaaatctaa agaaaccgtt ttatccgata agtttccgca ccgacagacc tggattcccg
      181 cctgcgcggg aatgacggga ttttggctta ctgtttttgt gaaaatggcg aaaccgtgca
      241 aatgctgatg ccgtctgaaa cactgtttga ttgtttcaga cggcattttt tgttcacatc
      301 gatcaagccg cgttgtcgaa accgctgtgg cgcaagagtg cgtctatgcg cggttcgcgt
      361 ccgcggaagg ctttgaagga ttctgccgcg ctgcgcgatc cgccgacggc gaggatttcc
      421 tgccaaaagc gtttgcctgt ggcggcgaca tcgtcgcttt cttcaaaggc ggcgtatgcg
      481 tccgcgctca atacttccgc ccatgcgtag ctgtaatagc ctgcggagta gccgccggcg
      541 aagatgtggc cgaagctgtt ggcgaagcgg ttgtattcgg gcggtcggac gacggcgact
      601 tctttgcgca cgctgtctaa aacctgttgc cagtttttca gacggccttc gtcgtcttcg
      661 ctgtaaatca tcatatcgaa gagggcgaac tccatctggc ggacgaggaa cattccgcgt
      721 tggaagtttt tggcggcgag cattttgtcg aagagttctt tcggcagggg ctcgccggtt
      781 tcttcgtggg tggacatttg cgccaataca ttgtattccc aaacgaaatt ttccataaac
      841 tggctgggca gttcgaccga gtcccattct acgccgttga tgccggacac gcccagttcg
      901 tccacttggg taagcaggtg gtgcaggccg tggccggttt cgtggaagag ggtgaggatt
      961 tcgtcgtggc tcaggcgggc ttccctgccg ccgacgggtg gggcgaagtt gcagacgagg
     1021 taggcggtgg gcagttgcag cgtgccgtct gaaaaacggc ggcgaccttt gtagtcgttc
     1081 atccacgcgc cgccgcgttt gccttcgcgg gcgtagaggt ccatatagac gccgcctatg
     1141 gtttcgccgt tttgttgcaa ttcaaaatag cgcacgtctt tgtgccagac ggggacggtt
     1201 ttttcggtaa atccgatgcc gtagagtttt ttgatttggg caaacagtcc gtttaatact
     1261 ttgccgacgg ggaagtattt tttgacttcg gtttcgctga acgcgtattt ggcttcgcgc
     1321 agtttttcgc tggcgtagcc caagtcccac ggttgcaaat cggcgaggtt caggctttcg
     1381 cgggcgaagg ctttgacttc ggcgaggtct ttttcggcgt agggtttggc gcggcaggcg
     1441 aggtcgtgca ggaagtttaa aacttgttcg ggggtgtccg ccattttggt tgccagcgac
     1501 aattcggcgt agtttttgaa gccgagcagt ttggcggttt gcagggcgtt tgcgagcgtg
     1561 cggtcgatgt tggcggtgtt gtcgaatttg ccgccgtctg aaagttcgct ggcgcgggta
     1621 acgtaggcgc ggtagatttg ttcgcgcagt tcgcggttgt cggcgtattg gatgacggcg
     1681 aggtagtgcg gaatctgcaa accgattttg tagcctgttt tgccttcgct ttgcgcggca
     1741 gcggcaaaca tggcgagcgc gtcttcggga atgccggcaa gcggtgcagc atcgtcaaag
     1801 taaatgccga acgcgtcggt cgcgtctagg acgttttggg agaatttggc ggaaagttgc
     1861 gcgccttcgg tttgcagttt tgccagttct gcctgctgtt cgggcggcag ttccgcgccg
     1921 ctgaggacga aatcgcgcag atcgtggttg agtttggttt tttgcgcggg ggagagggtg
     1981 tcgaactcgg gggagttttt gatggttttg aagcggttgt acagctcgat gtcttgtccg
     2041 atttcggtga agaagacggt gatttcgggc atcagttcgt tatagacggc gcgcagttcg
     2101 ggcgtgtcgg cgacggagtt gaggtgcgac accacgcccc aaatcctgcc gacgcgttcg
     2161 gtgatgccgg tcaggggttc gacagtgttt gcccagccgg tgtgcgtttg ggctttgatg
     2221 gcggcgattt gttcgcgcgc ttcggcgatg gcggtttgca gggcgggttt gatgtcttcg
     2281 gttttgattt gatcaaaacg gggttcttcg cccaaatgga gcagtgcgtt gtcagtcata
     2341 agatgggttt cctttgcgtg ttgtgcttca gacagcatat cggcaatatg ccgtctgaag
     2401 ccggaaatgg ggtcggtcgg ggaaagttaa agtgtttcgg agccggcggg gtaatttaac
     2461 aggcggtatt gtacgcgcaa aaattcgtcc ataaccgcct gttggatttc cagccgcttt
     2521 gaaacggggg aggcgaagcg gacgatgatg cggtatgcct tgtcatcgta cggcacgcgg
     2581 gtaacgcgcg gtctggcggc gggcgtgata aacagttttt ccgcctgcac gttttccaaa
     2641 tgccgttgga tggcggggat gtagggcgcg cacaagggct cgagtacggt tttcagacgg
     2701 catacggctt catccgaatc caaatggatg gggacgggga tttcgaccgt atggatgacg
     2761 tagtcgccca aaatattgtc gcggcgcacg ggatggctca acaacaggct gttggggaaa
     2821 gaaacggtgg ttcccgcaag ctgtccgacc agggggttcg gaccgacctg catcatcagc
     2881 gtgttcaaca ggttgatgtc gaccacgcgc ccgcgcaggc cgttgatttc gatatagtcg
     2941 ccgaccgagt attgctgggt ggcagacctt aaaatactgc ccgacagaca cataatcagt
     3001 tcctttgtcg ccacgacgac cgccgccgcc accgcaaaca tcgacaaagc cagcgtttgg
     3061 atttgcgccg accagataaa tgccagcgaa aacagcacca aaagcagcgt tatattgcgg
     3121 ctggcaacca aaaaccgccg cttgctttcg atgccgaaat ccggatgccg tttgaagtgg
     3181 atattcaaca gaagggcgcg cgccagcagc aaagccgcga ccaccgccac ggattcgacc
     3241 gcctccgcac gtatcgggac ggcaccgagc caagtgtcca acatattcca tatttccatt
     3301 tccgcgcccc tgtccgaaaa gtatagggtg tagattttag tggcaaaaaa acgcttttgc
     3361 cactttacgg gacaatcccc gacctgatgc cggaggcaaa cgtaccgttt catcttttcc
     3421 cggcggcaca ctgatgcgga taacgctgaa ttaggcggca aaatcggcta taatacacaa
     3481 ttatatatgc cgtcccgccc gctttttcta caaggtgcgg acttgttttg gcggcatcgc
     3541 aaaatctttt caaaatccgg caaaaaatat gactgaacaa aaacacgaag aatacggcgc
     3601 cgacagcatt caggtgctcg aaggcttgga agcggtacgc aaacgccccg gtatgtacat
     3661 cggcgacacg caggacggca gcggcctgca ccacatggtg ttcgaagtat tggacaacgc
     3721 cattgacgaa gcactcgccg gacattgcga caaaatcacc gttaccatcc acgccgacca
     3781 ttccgtcagc gtcgccgaca acgggcgcgg tatgcccacc ggcatccacc cgaaagaagg
     3841 acgctccgcc gccgaagtca tcatgaccgt attgcacgcg ggcggtaaat tcgacaacaa
     3901 cagctacaaa atctccggcg gcctgcacgg cgtgggcgtg tccgtcgtca acgcgctgtc
     3961 cgactgggta acgctgacca tctaccgcga cggcaaagaa cacttcgtcc gcttcgtgcg
     4021 cggcgaaacc gaagagccgt tgaaggttgt cggcgattcc gataaaaaag gcacgaccgt
     4081 gcgcttcctc gccagtgcgg aaaccttcgg caacgtcgaa tacagcttcg acatcctcgc
     4141 caaacgcatc cgcgaacttt cgttcctgaa caacggcgtg gacatcgaat tgaccgacga
     4201 gcgcgacggc aaacacgaaa gcttcgccct ttccggcggc gtggctggat tcgtgcaata
     4261 catgaaccgc aaaaaaacgc ccttgcacga aaaaatcttc tacgcgttcg gcgagaaaga
     4321 cggcatgagc gtcgaatgcg caatgcaatg gaacgacagc tatcaggaaa gcgtgcagtg
     4381 cttcaccaac aacatccctc agcgcgacgg cggtacgcac ctgaccgcgt tgcgccaagt
     4441 gatgacgcgc accatcaaca gctacatcga agccaacgaa gtcgccaaaa aagccaaagt
     4501 ggaaaccgcc ggcgacgata tgcgcgaagg tttgacctgc gtgttgtccg tcaaactgcc
     4561 cgaccccaaa ttttcgtccc aaaccaaaga caaactggtt tccggcgaaa tcggtcccgt
     4621 cgtcaacgaa gtcatcagcc aagccctgac cgacttcctc gaagaaaacc ctgccgaagc
     4681 caaaatcatc accggcaaaa tcgtcgatgc cgcccgcgcg cgcgaagccg cccgcaaagc
     4741 ccgcgaaatc acccgccgca aaggcgtaat ggacggcttg gggctacccg gtaaactcgc
     4801 cgactgccaa gaaaaagacc ccgcattgtc agaactttat ctggtcgagg gcgattctgc
     4861 aggcggttcc gccatgcagg ggcgcgaccg caaattccaa gcgattttgc cgcttaaggg
     4921 caagattttg aacgtcgaaa aagcgcgctt tgaaaaaatg ctcgccagtc aggaagtagc
     4981 cgctttgatt accgcgttgg gcgcgggcat cggcaaagaa gaattcaatg ccgagaagct
     5041 gcgctaccac cgcatcatca tcatgaccga tgccgacgtg gacggcgcgc acatccgcac
     5101 cctgctcctg accttcttct accgccaaat gcccgaactg gtcgagcgcg gctacatcta
     5161 tatcgcccag ccgcctttgt ataaagcgaa atacggcaaa caggaacgtt acctcaaaga
     5221 cgaactggaa aaagaccaat ggctgctcgg tcttgccttg gaaaaagcca aaatcgtttc
     5281 agacggccgc accatcgaag gcgcagaact tgccgacacc gccaaacaat tcctgttggc
     5341 aaaaaccgtc atcgaacagg aaagccgctt cgtagacgaa ctcgtcctgc gcgccatgct
     5401 acacgcgtcg cccattgatt tgacgtcgtc tgaaaacgcc gataaagccg ttgccgaact
     5461 ttccggtctg cttgacgaaa aagaagtcgc cctcgaacgc atcgaaggtc atgaaggaca
     5521 ccggttcatc aaaatcacgc gcaagctgca cggcaacgtc atggtcagct acatcgaacc
     5581 caagttcctc aacagcaaag cctaccaaac cctcacccaa accgccgccg cgctcaaagg
     5641 catggtcggc gagggtgcca agctttacaa aggcgaaaac gggtacgacg cggacagctt
     5701 tgaaaccgct ttggacatct tgatgagcgt tgcccaaaaa ggtatgtcca tccaacgata
     5761 caaaggcttg ggcgagatga accccgagca gctgtgggaa accacgatgg atcccgccgt
     5821 gcgccgtctg ttgaaagtgc gcatcgaaga cgccattgcc gccgacgaag tattcgttac
     5881 cctgatgggc gacgaggtcg aaccgcgccg cgcctttatc gaaaacaacg cgctgattgc
     5941 ccaaaatatc gacgcataag tgccgtttta aaaaaggaga cgggcatcgt gccgcgtctc
     6001 cttttggttt gtcaaacgga agccataccg tctgaaaccg cctttcggag caaaaccatg
     6061 gtcagcattt ttgatatttt caaaatcggt atcgggcctt ccagttcgca tacggtcggc
     6121 ccgatgaagg cagccgccgc ctttgcggca ggtttggatg cacaggctgt tcgcatcgtc
     6181 atcgacattt acggctcgct cgccctgacc ggatacggac acggtacatt tgacgcactg
     6241 atgctcggtt tggaaggcag cctgccgcac gacatcccgc ttgtcggcat tcccgaacgc
     6301 ctcgaacgca tccgcacgca gcacatcctc cggctcaacg ggcaagaaat ccgcttcatc
     6361 cccgaccgcg acctgaacat actcggcaat caagtgctgc ccaaacaccc caacagcctg
     6421 cgttttaccg cctatgcttc agacggcatc gtcttgaaag aacaggttta ttattcggtc
     6481 ggcggcggct ttgtcgttac cgaagaagat tttgaccggc aggcggaaac ggaaaaagcc
     6541 gttccctatc cctataccag ttgcgccgaa ctgcttgccc gatgccgtct gaaccggctc
     6601 gacatctccg aagtcgtgtt ggcaaacgaa gccgcgcttg ccggatgcgg cgaagccgaa
     6661 atccgccgcc gcgccgctgc cgttgccgag gttatggaag gctgcatcaa acgcggcttg
     6721 ggtgcggacg gcgaactgcc cggcggattg aacgtccgcc gccgcgcccc gcagcttgcc
     6781 gccaagctca aagtcctgcg cgaaaccgaa atcgtcaaca cccagctctg gccgatggtg
     6841 tacgccatgg cggtcaacga agaaaacgcc gccggcggac gcgtcgttac cgcaccgacc
     6901 aacggcgcgg caggcatcat tcccgccgta ttgcactatt tccgcaagtt caatccgcac
     6961 gccacacagg aacgcgtcga aaacttcctg ctcaccgcag gcgcaatcgg catcctctac
     7021 aagaccaacg cctccatttc cggtgcggat gtcggctgtc agggcgaagt cggcgtagcg
     7081 tgttcgatgg cggcgggcgc atacgccgaa gtcatcggcg gcacgcccaa acaagtggaa
     7141 aacgccgccg aaatggcgat ggaacaccat ttggggctga cttgcgaccc cgtcggcgga
     7201 ctggtgcaaa tcccctgcat cgagcgcaac ggcatcgccg ccgaaaaagc cctcaaactc
     7261 ggcacgctcg cgcttttgga agacggcacg gacaaaaaag tctcgctcga cgaagtcatc
     7321 cgaaccatgc tgcaaaccgg ccgggatatg aaggcgacct acaaagaaac ctcgcttgcc
     7381 ggactcgccg ccacgctccg gaaaaaagcc gtccccgtat ccgtgcgcgt ggtcgagtgc
     7441 tgaggatgga cagaaacgaa aatgccgtct gaaaacagtt ttttagacgg catttcattt
     7501 atttcttgcg gctttaccgt ttcagtgcca gcgtcaacac gcccgccgta accagcccca
     7561 agcctatcca ttcctgcgtg ttcgggcgtt cgtctaagaa aaccaccgcc atcaggaatg
     7621 caaaccggcg ttgtttgcag catccggcaa g
//
LOCUS       DAWKOX010000095         7613 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.095, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000095 DAWKOX010000000
VERSION     DAWKOX010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7613
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.095"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            155..328
                     /locus_tag="WJK78_001362"
     CDS             155..328
                     /locus_tag="WJK78_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ7598285.1"
                     /translation="MKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVI
                     RKEAGKSLSQPEK"
     gene            392..1675
                     /gene="hemL"
                     /locus_tag="WJK78_001363"
     CDS             392..1675
                     /gene="hemL"
                     /locus_tag="WJK78_001363"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ7598286.1"
                     /translation="MNRNEILFDRAKAVIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIVIAEQIAEI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPTEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FQTAADAAGIEFTADSVGGMFGLYFASHTPQNYGDMARSNIEGFKQFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1891..2163)
                     /locus_tag="WJK78_001364"
     CDS             complement(1891..2163)
                     /locus_tag="WJK78_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HEZ7598287.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2174..2737)
                     /gene="orn"
                     /locus_tag="WJK78_001365"
     CDS             complement(2174..2737)
                     /gene="orn"
                     /locus_tag="WJK78_001365"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ7598288.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2755..3642)
                     /gene="prmA"
                     /locus_tag="WJK78_001366"
     CDS             complement(2755..3642)
                     /gene="prmA"
                     /locus_tag="WJK78_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ7598289.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGEILEDQDWVR
                     LTQAQFDPIRISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEESWARLSGTKR"
     gene            complement(3760..5121)
                     /gene="accC"
                     /locus_tag="WJK78_001367"
     CDS             complement(3760..5121)
                     /gene="accC"
                     /locus_tag="WJK78_001367"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ7598290.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5235..5687)
                     /locus_tag="WJK78_001368"
     CDS             complement(5235..5687)
                     /locus_tag="WJK78_001368"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ7598291.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQQ
                     VKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5669..5926)
                     /locus_tag="WJK78_001369"
     CDS             complement(5669..5926)
                     /locus_tag="WJK78_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ7598292.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6043..7083
                     /gene="queA"
                     /locus_tag="WJK78_001370"
     CDS             6043..7083
                     /gene="queA"
                     /locus_tag="WJK78_001370"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ7598293.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
BASE COUNT         1603 a         1905 c         2253 g         1852 t
ORIGIN      
        1 gacggaagag ggaatcgcac aaacggttgt taaaggcaaa acgacccggg cggaggtaga
       61 ggcacgtttc gggaagcgca accctttcgg ttgttatgcc tatcacgagg tcagcctgcc
      121 gatttataat tttttgccga ccaatttcat ttatatgaaa tcagaacgcc gacattggga
      181 gtggtgtgtg gattacgact gggaaggagt tgtccgggac taccgcttta cacataaagt
      241 ggaaaaagac gagcgttccg tcatccggga tgcggttggc gtcatccgca aagaagcagg
      301 caaatccttg tcgcaacctg aaaaatgata aaatgggact ttctgcttct aagcccgaaa
      361 cctgccgttc agacggcatt tgaggataaa tatgaaccgt aacgaaattt tattcgaccg
      421 cgccaaggcg gtcatccccg gcggcgtgaa ttcccccgtg cgcgcattcg gcagcgtcgg
      481 cggcgtaccg cgcttcatca aaaaagccga aggcgcgtat gtttgggatg aaaacggcac
      541 gcgctacacc gactatgtcg gctcttgggg ccctgcgatt gtcggacacg cgcaccccga
      601 agtcgtcgaa gccgtgcgcg aagccgcgtt gggcggtttg tcattcggtg cgcccaccga
      661 gggcgaaatc gtcatcgccg aacaaatcgc cgaaattatg ccgtctgtcg aacggctgcg
      721 cctcgtcagc tccggcacgg aagcgacgat gaccgccatc cgtctggcac gcggttttac
      781 cggccgcgac aaaatcatca agtttgaagg ctgctaccac gggcattccg acagcctgct
      841 ggtgaaagcc ggcagcggcc tgctgacgtt cggcaatcct tcttccgccg gtgtgcctgc
      901 cgactttacc aaacacacct tagtcctcga atacaacaac atcgcccaat tggaagaagc
      961 ctttgctcaa agcggcaatg acattgcctg tgtgattttg gagccttttg tcggcaatat
     1021 gaaccttgtc cgcccgaccg aagccttcgt caaagccctg cgcgaattga ctgaaaaaca
     1081 cggcgcggtg ttgatttacg acgaagtgat gacaggtttc cgcgtcgcac tcggtggcgc
     1141 acaatcgctg cacggcatca cgcccgacct gaccacgatg ggcaaagtca tcggcggcgg
     1201 tatgccgctt gccgcgttcg gcggacgcaa agacattatg gaatgtattt ccccactggg
     1261 cggcgtgtat caggcaggta cattatcagg caacccgatt gccgtcgccg ccggtttgaa
     1321 aacgctggaa atcatccgcc gcgaagggtt ttatgaaaac ctgacggcgc gtaccgaaca
     1381 gttggttcaa ggttttcaga cggcagcgga tgcggcgggc atcgagttca ccgccgacag
     1441 cgtgggcggt atgtttggtt tgtattttgc cagccatacg ccgcaaaact acggcgacat
     1501 ggcgcgttcc aatattgaag gcttcaaaca gtttttccac ggcatgctcg accgcggcat
     1561 tgccttcggc ccgtccgctt atgaagcagg tttcgtttct gccgcgcata cgcccgagct
     1621 gattgatgaa acggttgcgg ttgcggttga agtgttcaag gcgatggctg catgatgttt
     1681 tgacggacag ggtttccctg ttcaatttgt ttggcagatt gaagtaagaa tgcacaccgc
     1741 cgtcattccc gcgcaggcgg gaatccagac ctttcagttt ctgtaatgat tgaaaataac
     1801 gtgccgaaat cagccgcacc cggcaggaag ccgccgccac ctgaaacaat gccgtctgaa
     1861 gccttcagac ggcattttat cggaagcgca tcagaaaaaa cggatagcga catatgcggt
     1921 aaaagcaagg gcaattacat agataaaccc ctttataaat tcaaaagtct catctatatc
     1981 gctatatttt tctttcagtt cgtcagattt tcgataacgt ttcattttca agaccacttc
     2041 atgaccaaca agcccgacct tccggattcc cgcctgcgcg ggaatgacgg gcgtgtatat
     2101 ttttgatttc aatctgctgt aaaaatgccg tctgaaatgc aggatttgcg cttcagacgg
     2161 cattgtttgt ttcttattgc gcttcggctc tcggggcgga aatcagaaag tgttcgcggt
     2221 agtggcgcat ttcttcgatg ctctccaaaa tgtcgtccaa tgccttgtgc gaaccgcgtt
     2281 tgaccacgct tttggcaacg ggcggattcc agcgtttggc aagctctttg agcgtggaaa
     2341 cgtcgaggtt gcggtagtgg aagtagtttt ccagtttcgg catatatttg accataaaac
     2401 gccggtcttg gtggatggag ttgccgcaca tcggcgtggc gcgttcgggt acccattccg
     2461 acataaagtc cagcagtttc tgttcgactt cggcttcggt atgcgacgat tcgcgtacgc
     2521 gctgcgtcag ccccgtccta ccgtgtgtgg cggtgttcca ctcgtccata ttgtcgagca
     2581 gctcgtcgct ttggtggatg gcgtaaactt cggattgcgc caatacattc aaatccgagt
     2641 cggtaataat catcgcgact tcgataatgc ggtcggtttc gggattaagc cccgtcattt
     2701 ccatatcgag ccagcatagg ttgtttttat cctgcatgat gtttcctttg cttgtcagcg
     2761 ttttgtcccg ctcaagcgcg cccagctttc ttcggtttcc gccgggtcga gatcgaacca
     2821 ttggctgtaa atgccgccga gttcttcggc ttgttcgtcc aacaaaccgg ataacacgat
     2881 gcggccgcct tgtttggtgc gggcggcgag catttcgccg agcatacgta aagggttggc
     2941 gaggatgttg gcgacaacta cgtcgaattg cccttgaggc agaccgtcgg gcaggaagaa
     3001 ttgtgcatcg acgttgttct gttcggcgtt gtccttgccg gcgcggacgg cttgttcgtc
     3061 aatatccacg ccgacggcag aacctgcgcc gagtttgagg gcggcgatgg tcaggatgcc
     3121 cgaaccgcag ccgtagtcga ggacgctttc gccgtttttg agttgcgtat ccagccattt
     3181 gaggcagagg cgcgtggtcg ggtggctgcc ggtgccgaag gcgaggccgg gatcgaggcg
     3241 taggttgacg gcagtgcctt cgggggcttc gtgccaagag ggggtaatcc acaggcgttc
     3301 ggaaattcgg atggggtcga attgcgcttg ggtcaggcgt acccagtctt ggtcttcgag
     3361 gatttcgccg gtgtatgcca agtcttttaa tccgcattct tgtgcggcgg tttggatgat
     3421 ggcggcggct tcgtcgtgtt cgccgaacag ggcgatgact ttgctctgct gccagatttg
     3481 ttcggcgggc ataccgggtt cgccgaaaat cgcctgttcg ttttgcgtgc cggcgtaggc
     3541 atcttcgatg gcggcggaga gtgcgccgtg ttccatcagc gcgtcggcga ggcgttcggc
     3601 gacggcatcg ttgacgttga cggtgatttg ttggtagggc ataacgggct ttcttaacag
     3661 accttcggaa tagggtcgta ctgtataagg ggatgggtgt gtaacggaaa tgccgtctga
     3721 aaacggacaa actgtttcag acggcatatc ggggacggct tatttgtcct gtttggcttt
     3781 gcgatcttcc agccagtgtt ccaaatagtg gatgctgacg ccgccttttt ggaaacccgc
     3841 atcggcgaac aggtcgcggt gaagcggcgt attggttttg atgccggtta ccgccagctc
     3901 ggcgagtgcg acgcgcattt tcgccattgc ctgttcacgc gttttgccgt gtacgcagat
     3961 tttgccgatc aggctgtcgt agtacggtgg gatgcggtag ccttggtaaa tgtggctgtc
     4021 cacgcggata ccgaagccgc cgggcaggtg gcagctttca atcgggcccg ggctggggat
     4081 gaagttgtat gggtcttcgg cgttgatacg gcactcaaac gcgtggcctt cgacttgaat
     4141 atccttttgt ttgtattgca aaggcaggcc ggcggcgatg cggagttgct cctgcacaat
     4201 gtccacgccg gtaatcagct cggtaaccgg atgctcaacc tgaacgcgcg tattcatctc
     4261 gataaagaaa aattcgccgt cttcgtacag gaattcaaac gtacctgcgc cgcgatagcc
     4321 gatgcgtttg caggcgtcgg cacaggcgtt gccgattttg gcgcgttctt tttcagtgat
     4381 gaacggagcc ggtgcttcct cgatgacttt ttggtggcgg cgttgcagcg aacagtcgcg
     4441 ctcggcaagg tagatggcgt tgccgtgttc gtcggcaatc acttggattt cgacgtggcg
     4501 cggacgttgc aggtagcgct ccatgtaaac catcgggttg ccgaatgccg cgcctgcttc
     4561 tgccttggtc atttcgacag attggaggag gtcttctttt ttctcgacca cgcgcatacc
     4621 gcgaccgccg ccgccgccag aggctttgat aatgacggga taaccgactt tatcggcgat
     4681 tttgaggatt tcttcgccgt cgtcgggcaa tgcgccgtca gaaccgggga cgcagggtac
     4741 gcctgccgct atcatcgcgt gtttggcgga gactttgtcg cccatcaggc ggatggtgtc
     4801 gggtttcggg ccgataaagg taaagccgga ctgctcgacc tgttcggcga aatcggcgtt
     4861 ttcggcaagg aaaccgtagc ccggatggac agcgtccgcg cagcttactt cggcggcggc
     4921 gataatggcg gggacgttaa ggtagctttg cgcggaagcg gcagggccga tgcacacgga
     4981 ttcgtcggcg agtttgacgt gcaggctgtc tttgtcggcc tcggaatgca cggcgacggt
     5041 ggcaatgccc atttcgcggc aggcacggag tacgcgtaat gcgatttcgc ctcggttggc
     5101 gattaaaact tttttcagca tgatgactgt tcctgtggtt ccggcaaccc gtccgtaaaa
     5161 aaaaaggtgc gggaacgccg aagggggaaa gcatttcaga cggcatcgga agtttatgcc
     5221 gtctgaaaac aggattatcc gatgatgaag agcggttcgc cgaattcgac gggcgtaccg
     5281 ttttcgacca gaatttcttt gaccgtgccg gatttttcgg cttcgatttc gttcatcagc
     5341 ttcatcgctt cgatgatgca cagcgtgtcg ccggctttaa cctgttggcc gacttcgaca
     5401 aaaggcgcgg cattcgggcc gggtgcgcgg tagaacgtgc cgaccatagg cgatttttgc
     5461 gcgtcggaca aatcgcgggc ggcaggtgcg gcgggcgcgg atgccgcaac gggtgcggcg
     5521 gcaggcgtta cggccggcgc ggcggcaggt acgggcgcgg cgtaaacggg tgcggcggcg
     5581 atggttcggg tgatgcggac tttttcctcg ccttcggtta cttcgatttc ggcgataccc
     5641 gattcttcaa ccaaatcaat cagttttttt aatttgcgca aatccatttc tgttccttta
     5701 aaggctgccg gtgttccggc gggttgttgc gttggttttt cagaaaacag ccggcttgcg
     5761 gcaacggcgc aaaccgggcg gaatggtgtt cggatacggt tttcctgtgg tggaaaacaa
     5821 ccgtgagaat gtgtttattt tcccgaagtt gtcggtaaat gtccagtaaa atatcaaaaa
     5881 acggcggttt ttgggggaaa tgtgcaggaa gcttgatttt gcgcacaaga tgccccgggt
     5941 caagagtgtt tattctaatc tgttggtttt tcggacaaag atgccgtctg aaaaagggct
     6001 aaagtgcgta taatggcggc ttgcccgaac gagagtgtaa aaatggatat ttcagatttt
     6061 gattttaccc tgcccgaaaa gctgattgcc cagcatccgc ccgaagtgcg cggcagcagc
     6121 cgccttttgg ttgcgttgcc cgatatgccg ctgcaagacc gggtgttcgg cgatttgccg
     6181 gattatgtcg aggcgggcga cgttttggtg ttcaacaaca ccaaagtcat gaaggcgcgg
     6241 ctgtttgggc agaaagacag cggcggcagg atcgaagccc tgattgagcg cgtgttggac
     6301 aaccataccg cactggcgca catccgttcg tccaagtccc ccaagcccgg tatggggctg
     6361 gtgtttgaag gcggcatccg tgccgtgatg gtcgggcgtg agggcgaact gttctgcctg
     6421 cgttttgaag gcggtcaaac cgtttacgaa cttttggaac agaacggcca tttgcctctg
     6481 ccgccttata tcgaacgtgc cgccgacgcg gacgacgaca gccgttatca aaccgtttat
     6541 gccaaatatc agggcgcggt cgccgcgccg acggcgggcc tgcattttac ggaagaactt
     6601 ttgcaccgtc tgaaagacaa aggcgcggta accgcagaag taactctgca cgtcggtgcg
     6661 gggacattcc aacccgtgcg tgtggaaaaa atcgaagaac acaaaatgca cagcgaatgg
     6721 tttgaagtgc cgtctgaaac cgccgccgcc gttgaggcgg caaaagcccg ggggaacaaa
     6781 gtctgggcgg tcggcacgac ttccatgcgc gccctcgaat ctgccgcgcg tgcgacgggt
     6841 cgtctgaaag cggggcaggg cgacaccgat attttcatca cgccgggcta ccgttttaat
     6901 gttgccgaca ggctggttac caatttccat ctgccgaaat cgacgctgct gatgcttgtc
     6961 agcgcgtttt cgggtatggg tcatatccgc gccgcgtatc gttatgcggt cgaacgcgaa
     7021 taccgtttct tcagctacgg cgatgcgatg gttttggggc ggaacgaagg ggtggtacgt
     7081 tagaacagcc tcaagtctat tgggggaaga caagtgccgt ctgaacggat gttcggacgg
     7141 cattcttttg ttgatttgaa tgaaaggaac tgcatgacat atagtggatt aaatttaaat
     7201 caggacaagg caacgaagcc gtagacagta caaatagtac ggcaaggcga ggcaacgctg
     7261 tactggtttt tgttaatcca ctatagattc aggcgcgaga ggcgagaaac tcagtcattg
     7321 ttgatgacgc gcaatacgtt aaaattcatt ccgttttggt cgtataaaca tattacatac
     7381 gccatttttt tgtattcaag gctgcctgaa aacagtgggc aagaatatct aacccaacga
     7441 aaagctgaaa aagcaacaaa aaataatctg caccttagtc ggttggttag tccaacctta
     7501 ggggtgcaga ccattcaatc tttcaggctg cctttgtttg tttataagat aaatttttag
     7561 ccgaacactt tttccaagtg tgcctgataa tctgccaagt atttttccac ttg
//
LOCUS       DAWKOX010000096         7607 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.096, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000096 DAWKOX010000000
VERSION     DAWKOX010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.096"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(95..775)
                     /gene="tsaA"
                     /locus_tag="WJK78_001371"
     CDS             complement(95..775)
                     /gene="tsaA"
                     /locus_tag="WJK78_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ7598294.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEVCIELNPKFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            889..1524
                     /locus_tag="WJK78_001372"
     CDS             889..1524
                     /locus_tag="WJK78_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ7598295.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSTKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGRWQVVVNEAACRGIAPETIETAWQEMHSAGAIILKNADEINKYINNQ"
     gene            1561..2529
                     /gene="waaC"
                     /locus_tag="WJK78_001373"
     CDS             1561..2529
                     /gene="waaC"
                     /locus_tag="WJK78_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ7598296.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPICGLDKNSAREGWAALAYVETYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTAPEAGRLKNLEQPYYAALHATSRDSKLWPVENWRALLQKLNEEQQCNIYLPWGS
                     EVEKTRAEQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQTLMDCVAADKG"
     gene            2755..3504
                     /locus_tag="WJK78_001374"
     CDS             2755..3504
                     /locus_tag="WJK78_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ7598297.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDTKLESLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIEGGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKTLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            3515..4450
                     /locus_tag="WJK78_001375"
     CDS             3515..4450
                     /locus_tag="WJK78_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ7598298.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEALKN"
     gene            4513..5124
                     /locus_tag="WJK78_001376"
     CDS             4513..5124
                     /locus_tag="WJK78_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ7598299.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGMQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     VLERDLQLDCRLTVSLSLVNYEACVAAWKSTRQIEVNTEKPFE"
     gene            complement(5176..5493)
                     /locus_tag="WJK78_001377"
     CDS             complement(5176..5493)
                     /locus_tag="WJK78_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ7598300.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            5651..6922
                     /gene="purD"
                     /locus_tag="WJK78_001378"
     CDS             5651..6922
                     /gene="purD"
                     /locus_tag="WJK78_001378"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ7598301.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVASGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARIVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPHTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            6956..7558
                     /locus_tag="WJK78_001379"
     CDS             6956..7558
                     /locus_tag="WJK78_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ7598302.1"
                     /translation="MTNVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
BASE COUNT         2017 a         1495 c         2046 g         2049 t
ORIGIN      
        1 tttaatccgc tataacttga tattgcggct tatggcgaac aaacaacagc cgtttgttca
       61 actgctatgc ggcaaaaccg gatttttgcc cgatttaaag cggggttggg gaaagatcaa
      121 taacggttgc acggttttcc tcgatttgaa atctgacttc gtaatctgca atattcatca
      181 cataaatccg ttcgggaata ttctgatagg cggggcgcgg atcttgggca atgctttggc
      241 tgataaggtt tttggtgttt gcagataaat tttccgcgcc gatgttttcc tgccaaacga
      301 cttccaactc tacgggtttg ccgctgacga aaccggatgc ggcatcgggt ttggattcga
      361 caaaggggat ataaggtttg atgtccacaa tcggtgtgcc gtccagcagg tctgcgccgc
      421 tgcaatagag gcggacgggt ttgccggttt cgatgcgttc gagtttcagg agcgagagtc
      481 cgagatggtt ggggcggtgg gggctgcgcg tggcgaacac gcccattttt tgtttgccgc
      541 cgagccgtgg cgggcgcacc atttgcgccc agccttcatc caatacgccg tgaaaaataa
      601 aacttatcca cacataatcg aaatcttcca gcccgcgcac gctgtctgcg gtgaatttgg
      661 gattcagctc gatgcatact tctgcggcag agaccaaacc gggctggcgg gcgatgccga
      721 atttctgttt gtagggcgag cgggcggtgc cgatgggggt aatggtataa gtcataaggt
      781 tgtggataag ttttttggaa aaaccttatc ttatcacaat cggttttacc gcttttgggc
      841 agtaatttgt tataatacag ggcattttaa tcgcgttgaa ataatgagat gattgtttcc
      901 attgatgttg atgcacaaaa aacgtttacg ccactgtgtc ctgacgaact gcccgtgaac
      961 gaagggcatt tgattgtcga ggagttgaat gcgcaagccg ctttggcgga tttgcgcgtg
     1021 atgacgaaag atgcgcatca tatggtagcg aaatggcttg tggataaccc tgttgatatg
     1081 ttgaagccga caggtttgcc tgatgcggat ttgacttggg tggctcatgc gatggtcggt
     1141 acgcgcggct atgaattatt ggacggactg ccttctacca aagaatacga ttattgcgtt
     1201 tggaaaggtg ttgatcctga attgcatcct tacggcgcgt gttttcacga tattgaggaa
     1261 aaactaagca cagggctgat tgaatggctg cgttgtcaaa atacggatac ggttattatc
     1321 ggtgggttag ctacggatta ttgtgttaaa acaacggttt tgcagttact caaaggcggt
     1381 cgttggcagg ttgtcgtcaa tgaagcggct tgtcggggta ttgcgccgga aaccatcgaa
     1441 acagcatggc aggaaatgca ttctgctggg gcaatcatct taaaaaacgc tgatgaaata
     1501 aataaatata ttaataatca ataagttaaa attgtttcac gtgaaacccc cttcctaaat
     1561 atgaaaattt tgcttgtccg cttgtctagt atgggcgatt taattcacac tttgcccgca
     1621 atcgaagatt tggcgcgaca atgtcctgat gtagaactgc attggctatg tgaggctgga
     1681 tttgcagata ttgcgcgcct gcatccgttt gtaaaaaaaa tccatgtgat gaaatggcgg
     1741 caatggcgca aacatctctt tcgggctgaa acttggcggg aaatgggtca tctgaaacag
     1801 actttgcggc aggaagtatt tgatttcgta ttggacagtc aaggtctgat taaaagcgcg
     1861 tgtttcgcca aaatggcaaa atccccgatt tgtggtttgg ataaaaacag tgcgcgcgag
     1921 ggatgggctg ctttggcgta tgtagaaaca tacgctgtac cgaagggaaa aaatgccgtt
     1981 tggcgcaacc gtgaactgtt tgcccaagta tttgggtatg taatgcctga aacgcaggta
     2041 tttggcttga ctgctcctga ggcaggtcgt ctgaaaaatt tagagcagcc gtattatgcg
     2101 gctttgcacg cgactagccg agacagtaaa ttatggcctg tggaaaactg gcgggcgtta
     2161 ctgcaaaagt tgaatgaaga acagcaatgc aatatttacc tgccttgggg aagtgaagtt
     2221 gaaaaaacgc gtgccgaaca gattgcagac ggactgccgt ttgctattgt gtgcgacaaa
     2281 ataaatttat tgcaggcagc gtatctgctg aaatacgcgg tcggaattgt cggcgtggat
     2341 accggtttgc tgcatttggc aaatgccttg gaaaaacctg tggtcggcat ttataccgat
     2401 accgatccga ttaaaacagg cgttcaggtt tcgccaattg caaaaaattt gggcaatatc
     2461 gggcagattc cgaccgcaga tttggtttat caaacgttga tggattgtgt tgcagcagac
     2521 aaaggctaaa gggttgtctg aaactgatat agcacctgat atttttcagt ttgttaagca
     2581 taagaatgta tatctaccag cctgagtaaa tgctttaaaa atggtataat cggcaagcat
     2641 tatccgaaag atttttgaat gaattcgttt ttaaggaaaa cggatttggt tttataggga
     2701 agaaggtttg gtttcgctgg atggtgaaag cagcgttctt tttaggaggg ttcaatgaaa
     2761 gcactggtcg cagtaaagcg cgtagtggac tacaacgtca aagttcgtgt aaaagccgat
     2821 ggttcggatg tggatatcgg caatgtcaaa atgtcgatga atccgtttga cgaaatcgct
     2881 gtggaagaag ctgtccgttt gaaagaagcc ggaaaagtaa gcgaaatcgt agcggtttct
     2941 ttgggtgaga aaaaatgcga agaaaccttg cgtacagctt tggcgatggg tgccgaccgt
     3001 gccattcatg ttgaaaccga tactaaactg gagtctctgg ccgttgctaa gttgctgaaa
     3061 gccgttgcgg acaaagaaaa tccgcaaatt ttctttttgg gcaaacaagc gattgatgat
     3121 gatgccaatc aagtggcgca aatgctggca gctttgctga atgcggcgca aggtacgttt
     3181 gcttcaaaag tacacattga aggtggtgaa gtacagattg tgcgcgaaat tgatggcggc
     3241 gaagaaacca tagcattaaa actgcctgct gttatcagtg ctgatttgcg tttgaacgag
     3301 ccgcgctttg tcaaactccc caatattatg gcggcaaaga aaaaaacttt ggaaaaactg
     3361 actcctgacg atttggttgc cgacatttca cctcgtttga aaacggtgaa atttgccgaa
     3421 cctaaggcgc gtcaggcagg cgtaaaagta gcaagcgttg ccgaattggt tgaaaaattg
     3481 aaaaacgaag ccaaagtgat ttgaggaggc tgaaatgagc gtattgatta ttgtcgaaca
     3541 cgacaacaaa cagttgaatc ctaccacttt gcatgctgtt accgctgccg ctaagctggg
     3601 taaaatcgat ttattggttg ccggaagcgg tgcatctgct gtagtagagt tcgcaaaaca
     3661 agtggcgggt gtggaaaaag ttttggttgc agatgctgcc cattatgccg aaggtttggc
     3721 tgaagagttg gctccgctgg ttgtcaaatt ggcagcggat tactgctatg ttgcagcaac
     3781 ggcaactaca ttcggtaaaa accttttgcc tcgcgtagca gccttattag acgtaccgca
     3841 aatttctgat ttgaccgaaa ttgtggataa cacgactttt gtgcgcccca tttatgcggg
     3901 taatgcattt gaaaccgtgc aagctgattc agaaaaattg gtgctgacct tccgtgcgac
     3961 ggtttttgac gcagtggcgg cgcaaggtgg taatgctgag gtaattaatg ttgaagcaac
     4021 ccctgcccaa aacctgagcc gttttgttaa ccgtcagctt tcccattccg atcgtcctga
     4081 actgactcag gcaaaagtga ttgtttccgg tggtcgtgcg ttgggtagtg cggaaaaatt
     4141 caatgaagtg ctgacaccgt tggcggatgt tttaggtgcg gcaatcggtg catcccgtgc
     4201 ggcggttgat gccgaatatg cgccaaacga tgctcaagtc ggacaaaccg gtaaagtggt
     4261 tgcgccgcaa ctctattttg caatcggtat ttcaggtgcg attcaacacg ttgccggtat
     4321 gcaagacagt aaggtgattg ttgcaatcaa taaagatgct gatgcgccga ttttcaatgt
     4381 agccgattac ggattggttg gcgatttatt tgaaatcgtt ccacaattaa cagaagcatt
     4441 gaaaaattaa tgtttcacgt gaaacgttca gacgaccttg ttattaatga ggtcgtctga
     4501 aaacatttca gcatgattac gacttataaa accattactt cctcgacgca ggctgagttt
     4561 aaagataaag gcagccgttt tattgcattt gcctatccga ttcggacatt ggctgatgtg
     4621 aaaaaatacc tcgatccgtt aaaggaagag catcataaag cacgacactg gtgctatgcc
     4681 tatcgtttgg gtgtggatgg catgcaattt cgtgccaacg atgatggaga gccatcagga
     4741 agtgctggac gaccaatttt gggacagatt gattcggtgg gtattaccga cgttttggtc
     4801 gtggtcgtcc gctatttcgg tggtactttg ttaggtgttc caggtctgat acatgcgtac
     4861 aaagaggcga cggctcaagc gttggcagtt gcagaagtag ttgaaaagaa tattgaaaaa
     4921 actgtttggc tgaaatgtga atatccgttt ttgaatgaag cgatacgcat tgctaaacaa
     4981 tatcaggcgg atgtattgga gcgggatttg cagttggatt gccgattgac ggtcagtttg
     5041 tcgttggtaa attatgaggc ctgtgttgcg gcttggaaga gtacacggca gattgaagta
     5101 aatacggaaa agccttttga atgaaaggtc gtctgaaatg ctttgtgatg gtatttcaga
     5161 cgacctcttc gctgactaat cttcttgtgt atatttgtct aaggcatcga cgctggagcg
     5221 caaatataac caagccagtt gatggaattc gcccagcgcg ttccatagtg catcttcact
     5281 cataatgctg tattcgcctt ctgtgcgcaa atccacctcc gctccatctt caatagcccg
     5341 atgacaagcc tgatattcgt gggtataaaa attgtccata tcgcgaatca aagcgacggc
     5401 atgtttccaa cggcggatgt cttcttccaa ttgcggtagt aaatgacacc attcgcggta
     5461 tttgctttgg atttcatcaa tacgtttttg catggttgct tgtccttttt taatttatga
     5521 ataagttgaa taggttgcag agtggaatga agcggtcttt tgtttgattc tactaaaatt
     5581 tcttcagatg ggataaaagt ccctttgtat cgagttttcg ttaaaagtac atatttgtca
     5641 aggagatggc atgaaactgc tggttatcgg taatggcggt cgcgaacacg cgctggcttg
     5701 gaaattggcg cagtcgccta aagtggaaac agtatttgtt gcgtctggta atgccggtac
     5761 agcgattgaa cccaagctgc aaaacatcga cttgactgcg catcaggatt tgattgaatt
     5821 ctgtcgtaaa gaaaatattg tttttaccgt cgtcggccct gaagcgcctt tggcggcagg
     5881 tgttgtggat gatttccgtg ctgcaggact aaaaatattc ggtccgacac aatatgcggc
     5941 gcagttggaa agttccaaag atttcgccaa agcatttatg gcgaaataca atattccgac
     6001 cgcgcaatat caaacctttg aaaacgccga tgccgcacat gattacgtca atcagaaagg
     6061 tgcgcctatc gttatcaaag ccgatggttt ggcggcaggt aaaggcgtga ttgtggcgat
     6121 gactttggat gaagcgcatg ctgcgattga tgatatgctg ctggacaaca aaatgggcaa
     6181 tgccggcgcg cgtattgtga ttgaagattt cctgcaaggc gaagaagcga gttttatcgt
     6241 catggttgat ggcaataatg tactgcctat ggcaaccagc caagaccaca agcgtctttt
     6301 agacggcgac aaaggtctga atacgggcgg tatgggtgcg tacagccctg cgcctgtggt
     6361 aacgcctgtt gtgtacgaac gcgcgatgaa tgaaattatt ttgccgaccg tagcagggat
     6421 gaaagcggag gggcatgagt tcaccggttt cctgtacgca ggtttgatga ttgatcaaag
     6481 cggtgcaccc catacgattg agtttaactg ccgtttcggc gatcctgaaa cccagccgat
     6541 tatgagccga ctgaacagcg acttatcgga tttggttgaa gcggcaatag acggcaaact
     6601 cgatagcgta accgcggaat ggagcccgca aactgccgtg ggcgtggtac tggcggcgca
     6661 aaattacccc gaaacgccca aaaaaggcga tgttatttcc ggtctggatg ctgccaacca
     6721 agtaggcaaa gttttccatg caggtacaac ggcaaacgag aaaggtgacg tattgaccaa
     6781 cggcggacgc gtattgtgtg ttgtgggatt gggcgataat gtggcgcaag cgaaagctaa
     6841 ggcatatggc gcgttggaaa aaatcagttt cgacgggatg caataccgta aagacattgc
     6901 cgataaagcg attaaccgtt aattagaaag aggatgatgc cgtctgaagc caagtatgac
     6961 taatgtgctt cagacggtat tttatattat gttatttccg agaattatcg cagcatcagc
     7021 gcaacgtaag ttaagcgttt atttgaaaaa aggtggtttg gtcgcttatc cgaccgaatc
     7081 ttgttatggc ttggggtgtc ttccgacatt agccaaagca ctcggtaagt tggcgcattt
     7141 gaaaaaaaga ccgcaacaca agggtatgat tgtcatcggg aatcaatttg aacaattgca
     7201 gcctttactt caaatgccgt ctgaaaatct tcaggatatg cttagaaaag aatggcccgc
     7261 ccctaaaacg ttcctattat ccgccaaatc ctgtgtctta cccgagttac gcgggaaaca
     7321 gcgcagcaag ttggcggtca gggttcccgc ccatgtaggt gcgcgccgct tgtgtcaggc
     7381 tttgcaaacg cctttggtct cgacttcgtg caaccgcgca ggcaaacgcg cgtgtcggac
     7441 ggagagggaa gtcagaaggc aattcggacg cgatgtgtgg attgttggtg ggagaatcgg
     7501 caggcagaaa tcgccgagtc agattattga cggggaaaca ggtaaacgtt tgcgttagat
     7561 atgggtactt gaatgaaaac ttttttgcat acacaaagaa aaaattt
//
LOCUS       DAWKOX010000097         7576 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.097, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000097 DAWKOX010000000
VERSION     DAWKOX010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7576)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7576)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7576
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.097"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(183..2972)
                     /gene="ileS"
                     /locus_tag="WJK78_001380"
     CDS             complement(183..2972)
                     /gene="ileS"
                     /locus_tag="WJK78_001380"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ7598303.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDRPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKISPAIDVAYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGISILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYIGETLRVAGMRVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYALVLARRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMASYL
                     NALGEELRFALLVSKAEVKVGDELAVAAKASDGEKCERCWHYTHDVGAVAGHETICKR
                     CAGNVGGEGETRHYA"
     gene            complement(3113..4033)
                     /gene="ribF"
                     /locus_tag="WJK78_001381"
     CDS             complement(3113..4033)
                     /gene="ribF"
                     /locus_tag="WJK78_001381"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ7598304.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMAELKRQIAADMEAAKCW"
     gene            complement(4332..5627)
                     /gene="tyrS"
                     /locus_tag="WJK78_001382"
     CDS             complement(4332..5627)
                     /gene="tyrS"
                     /locus_tag="WJK78_001382"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ7598305.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLHQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEVLVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(5690..7570)
                     /locus_tag="WJK78_001383"
     CDS             complement(5690..7570)
                     /locus_tag="WJK78_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ7598306.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKNWLPGGFLGVDIFFV
                     ISGFLMTMILHREMSGGGGRFSLKAFYIRRIKRILPAFFAVLAATLTGGFFLFTKDDF
                     FLLWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLV
                     ARKSPRVQFGFLAALCALSLAASFMPSAFDKYYLPHLRACEMLVGSLTAVWMRYRQQR
                     NLAVGRCCAAAGALFSACILSACLFAYSKQTAYFPGPAALIPCLAVAALIYFNHYEHP
                     LKKFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSTAAAIVLILLLSLIS
                     YHCIEKPFKKWKGSFAQSVLWIYALPMLILGAGSFFAMRLPFMAQYDRLGLTRSNTSC
                     HNNTGKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEG
                     YASRVFQNWAACRAVYRYAEEHLPLYSKVVLAMRWGSQMPENSRSLAYDAGFFQKFDR
                     MLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRPDDESTLKANARIRE
                     LAAKYPNVYIIDAAAYIPANFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRH
                     NH"
BASE COUNT         1691 a         1926 c         2153 g         1806 t
ORIGIN      
        1 atcggaaatg actgaaacct cgagattcta gattcccact ttcgtgggaa tgacggttca
       61 gttgcattcc gacaacaccg caatcttgaa acccctccgc cgttataaag acaaatcgcg
      121 gtacaaaaaa tgccgtctga aatgctgttt ggcggtttca gacggcattt gctcaaactt
      181 tatcaggcgt aatggcgcgt ttcgccttct ccgccgacat tcccggcgca gcgtttgcag
      241 atggtttcat ggcctgcaac tgcgcccaca tcgtgggtgt agtgccaaca gcgttcgcat
      301 ttttcaccat cgctggcttt ggcggcaacg gcaagttcat cacctacttt cacttcggct
      361 ttagacacca gcagggcaaa gcgcaattct tcgcccaaag cgttcaggta gctggccatt
      421 tcttccggcg cagtgatttc ggcttccgcc tgcaaggacg aaccaacggt tttgtcggcg
      481 cgcaaaggct caatggcggc ggttaccgct tcgcgggctt cgcggattgc cgtccatttt
      541 ttcaccagtt cggcttcggc tttttcgttg atggtcggga actcgtgcca agtatggaaa
      601 aggacgctgt cttcttcgcc gccgccgatg atgtcccacg cttcctcgcc ggtgaagcac
      661 aaaatcggtg caatcaagag aaccaaactg cgtgtgatgt gatacagggc agtttgtgcg
      721 ctgcggcgtg catggctgtc tgctttggtg gtatagaggc ggtctttcag gatgtcgagg
      781 tagaacgcgc ccaagtcttc cgagcagaaa gaaacaatgt cttttacggc gaagtggaag
      841 gcgtagcgcg gatagtaatc gcctgccaga cgctcttgca gccgacgcgc caacaccagg
      901 gcatagcggt cgatttccac catatccgcc tgttgcacgg catcttcaat cggattaaag
      961 tcgctcaagt tggcaaacaa aaagctcaag gtattgcgga tacggcggta gctttcggtt
     1021 acgcgcttaa ggatttcttt agaaatcgcc aattcgccgc tgtaatcggt agatgccgcc
     1081 cacagacgca ggatgtccgc gccgaattcg ttatagactt cttgcggcgc gacgacgttg
     1141 ccgatggatt tcgacatttt tttgccttcg ccgtctacaa caaaaccgtg ggtcagcagc
     1201 tgtttatacg gtgcgcgtcc cattgatgag gcgcagccgg tcagcatgga cgattgaaac
     1261 cagccccggt gctggtcgct gccttcgaga tacaaatccg ccggccattc caattcttcg
     1321 cgttgtttca caacggaata atgggtcgaa ccggaatcga accatacgtc catcgtatcg
     1381 gggagtttgt cgtaatgttc gcaatcttcc gcgcttaata attcgctttt atcgagggag
     1441 aaccaagcct cgatgccttt ttcttcgatt ttcagggcaa ctttttccaa aagttcggca
     1501 gagttcggat gcagctcgcc cgtttctttg tgaacaaaga aagtcatcgg cgtgccccaa
     1561 tagcgttggc gtgaaaccac ccagtcagga cgaccttcaa tcatggcttc caaacgcgcg
     1621 cgaccccaag acgggaagaa ttcggtgtcg tccacggcct tgatggcttt gtcgcgcagg
     1681 gttttgccgt cggcaccggc tttgtccata ccgacaaacc attgaccggt cgcgcggtaa
     1741 atcagcggcg ttttgtgccg ccagcagtgg gcgtagctgt gttcgatttt actgcttgcc
     1801 aaaaggttgc cggtttcttc caaccattgc aggatgacgg ggttcgcctc ccaaacgcgc
     1861 ataccggcaa cgcgcagcgt ttcgccgatg tatttgcctt cggcgttgac aggattgtaa
     1921 agctcgatgc cgtatttgtt gcagacggcg tagtcttcca aaccgtgcgc gggcgcagta
     1981 tgcaccaagc cggtaccggc atcggtggta acgtgttcgc cgttaagcat gggaatatcg
     2041 cgttcgagga acggatggtt catgtgcagg ttttccagct tgtcgccggt ggtttcggca
     2101 agaatagaaa tgccgtctga aaagccgtag cgtttcaaag cgtcttccgc caaatctttg
     2161 gccaatacca atttgccttt gggcgtatcg attaattgat acaccacgtc tgcacccgct
     2221 gaaacagctt ggctcgcagg caaagtccaa ggcgtggttg tccaaataac ggcaaacgct
     2281 ttgccttcga tacctgccaa accgaatgcg gcggcaagcg cggcggtgtc tttaaacgga
     2341 taggcaacgt caatcgcggg cgagattttg tctttatatt ccacttccgc ttcggccagc
     2401 gaagaaccgc agtccaagca gaattgaacc ggtttcgcac cccggtagag atagccggat
     2461 ttgtagattt cgccgagcat acgcacggta tcggcttcgg ttttgaaatc catggtcagg
     2521 taaggacggt cccaatcgcc caacacgccc aagcggataa agtctttttt ctggcgggca
     2581 acttgttcgg cggcatattc gcggcacaat tcgcggaaac gcgctttggg catgtctttg
     2641 ccgtgcagtt tttctaccat cacttcgatg ggcaggccgt ggcagtccca acccggcaca
     2701 taaggcgcgt caaaaccggc ttgggttttg ctgcggataa tgatgtcttt gagaatttta
     2761 ttgacggcat gaccgatgtg gatgtcgccg ttggcatacg gcgggccgtc gtgcaggatg
     2821 aatttcggac ggcctttggc gatttcgcgc agtttttggt agcgtttttg ctcgtaccag
     2881 cttttcagcc atgcaggctc gcgcttggca agattgccgc gcatcgggaa cgggctttcg
     2941 agcaggttga cggttttgct gtaatcggtc attttttaat ctctattgtt acaatatttc
     3001 ggttcagacg gcattgcgcc tcaaacagta tttcacaacg ggaaacccct atgccgtctg
     3061 aacagttaaa agattgattg tagcccaatc ggatggtttg tataaggttt ttctaccaac
     3121 actttgcggc ttccatatcg gctgctatct gccttttcag ttctgccata ccgtcaaact
     3181 tttcttcatc gcgcagtttg tgcaggaagc ggacgttcag ccgttgtccg tacaggtcgc
     3241 cttgaaagtc gaacaggtgg acttcaagct tttgagaaca gccgctatca acggtgggat
     3301 tgaaaccgaa gctcgccacg ccgcgccgcg tgccgaatgc gccgtccgct tcgacgacga
     3361 acacgccgcc gagtgcataa cggtggcggg gcaggcggat gttggcagtc ggggcgttta
     3421 aggtgcgtcc gagttttctg ccgtgcacca ccctgccgct caagacgtag tcgtgtccca
     3481 aaagtttttt cgcataggca aggttgccgt ctgaaagggc ttgtcgcacg gcggtactgc
     3541 tggtgcggat gtcttcgacg atgacggaag gcgtacgctc ggtctgcata tcgggctgtt
     3601 gtgccaaaag ttcaaaacag ccttcccgcc ccgcaccgaa acggaaatca tcgccgacga
     3661 gcaaataacg cgtattcaag gtttgacgca gcaggcggtc gataaaccct tgcgcggata
     3721 tttcggaaaa attttgatcg aaacgcaaaa cccagacggc atcgacacag cctgtgcctt
     3781 ccaataattc gagcttggtg cgcagggggc tgatccgaca cggtggcatc ctgccggtgc
     3841 ggagtgcgaa aaattctttg ggttggggtt cgaaaacgac ggtcacgacg ggtaatccgc
     3901 gcgtatcggc ttcgaggcgg agtttttgga ggatgtgttt gtgtccaagg tgtacgccgt
     3961 cgaaattgcc tatggttacg gcggccccgt gcggaaagtc gggcgcgttg tgccgcccca
     4021 gcctgattct cattgttgcg ttcgggtatg tggtgaaaca ggcggtcatt gtaaacggta
     4081 ttgcggttta tagacagtgt gccgcccgtt acgcccgccc gacgctggaa aagcaggcaa
     4141 atttcccgcc gccgaacgcg ccaaacgcat aaagcgtgca tcaggcgcga tcctatgtgt
     4201 tgaaacatcg ccccaaacct gatgcaacat cagtgaaaat cgttcttttt taaccaggta
     4261 aaccgagaca aacaaccctc cgccgtcatt cccgcgcagg cgggaatgac ggcatttctg
     4321 cggcaatcgg attatttcca aaccaaaagc gcgtggttgc gtttgccgcg ccgaaggatg
     4381 gtgtatttgc cgaaacgttt gtgttcgtcg gtcagcaggc aggcatcgtc ggggcgttcg
     4441 gcggcgtggt tggggttgtt ggcttcggca ggtttgccgt tgagcaaaac cgctttgctg
     4501 ttcacaaagc cgcgcgcttc tttattggag gatgccaaac cggtttttac caagacttcg
     4561 acgacattga tgccgtctga aacttcaaat gcaggcagac cgtcgagggc gagctgctcg
     4621 aagtcgcttt cggtcaggct gctttggtct tcggcaaaca ggctttcgga aatgcgttgc
     4681 gcggcggcaa gggcttcttc gccgtgaatc aggcgggtca tttcttcggc gaggatgcgt
     4741 tgcgcttcgg gcttgctgcc gcttgccttg tctttggctt cgatggcatc gatttcttcg
     4801 atggacagga aggtaaagta tttcaggaat ttatacacat cggcatcggc gactttcagc
     4861 cagaattggt agaactgata gggcgaggtt tttttcgcgt tcagccatac cgcgccgcct
     4921 tcggttttgc cgaatttggt accgtctgat ttggttacca aaggcagggt cagaccgaat
     4981 acttgttttt ggtgcaggcg gcgggtcagg tcgataccgg cggtgatatt gccccattgg
     5041 tcggagccgc cgatttccaa aaccgcgccg tggcgtttgt tcaactcggc gaagtcgtaa
     5101 ccttgcagca gggaataggc gaactcggtg aaggaaatgc ctgcgccgtc gcggtcgatg
     5161 cgctgtttga cggattcttt gttcagcatg gcgttgacgg agaaatgctt gccgatgtcg
     5221 cgcaggaagt caaggcagtt catgctgccg aaccagtcgg cattgttcgc cataatggcg
     5281 gcatttccgc cttcaaagct caagaaaggg gttaattggt tgcggatact ttccacccag
     5341 ccggcaacag tttcggcgga attcaagctg cgttcggcgg ctttgaagct ggggtcgccg
     5401 atcataccgg tcgcgccgcc caccaaagca atcggcgtat gccccgcctg ttggaagcgg
     5461 cgcaatgcca atacgggcag caggtgtccg atgtgcaggc tgtcggcggt cgggtcgaag
     5521 ccgcaataaa gggaaatttt ttgttcgttc aacaaagcgt ctaaggcttc gatgtcggtg
     5581 gtttgcgcga ttaggccgcg cgattgcagg tcttggatga cgctcatcgg tctctttcaa
     5641 aaaaaattag cggttttgca aaccgccgat tgtaacaaat ttaagcgaat caatggttat
     5701 ggcgcgtatc gagaaaccgt tgtttttcgg aaaaacgctt cgccaattcc gtgccgccgt
     5761 aagggttgat gtggtctttg tccgagtaaa ccggcaatcc gccgatttgg aaatttgcgg
     5821 ggatataggc ggcggcatca ataatataga cgttggggta tttggctgcc aattccctga
     5881 tgcgtgcatt ggctttcaga gtgctttcgt cgtccgggcg cagggtttgg cggtaacccg
     5941 gtatgcgtga agacaagata taggcgcgtt gtacgttgta agacgaggca aggttgtccg
     6001 ccatcaggta aacggcttgt ttttcggatg agagtttgtg cagcatacgg tcgaattttt
     6061 ggaaaaaacc ggcatcgtag gcaagggagc ggctgttttc gggcatttgg ctgccccagc
     6121 gcatcgccaa aaccactttt gaatacaggg gcaggtgttc ttcggcatag cggtaaacgg
     6181 cgcggcaggc ggcccagttt tggaacacac gggacgcgta gccttccaca taggcgcaag
     6241 cgtcggcgga aaccatagtg gcggaccatt tttctttttt gcccacggca tcgaagaatg
     6301 ttttgtaatg gtcggcgtgg gagtcgccca aaaccagcag ctccggctgt ttttccgtat
     6361 ccccccacag gcattgtttg ccggtattgt tgtggcagga ggtgttggaa cgcgtcagcc
     6421 ccaagcggtc gtattgcgcc ataaacggca gcctcatcgc gaaaaacgag cccgccccca
     6481 aaatgagcat aggcaaggca taaatccata aaacggattg tgcgaacgaa cctttccatt
     6541 ttttaaacgg cttttcgatg cagtgataag aaatcaggga aagcagcaat atcaggacga
     6601 ttgctgccgc tgttgaataa ggcggcaggt tgtccgggcc gatatagcgc ataaaggcca
     6661 atatcggcca atgccacaga taaagcgaat aggaaatcaa accggcggca acagtgattt
     6721 tccattggaa aaatttttta agcgggtgtt cgtaatgatt gaaataaatc agcgcggcaa
     6781 cagccagaca gggaatcaaa gcggcgggtc ccgggaaata ggcggtttgt ttcgaatagg
     6841 caaacaggca ggcggacagt atgcacgcgg aaaacaatgc gccggcggcg gcacagcatc
     6901 tgccaacggc gagattccgc tgttgccggt accgcatcca cacggcggtc agcgatccga
     6961 ccagcatttc gcaggcgcgc aggtggggca ggtaatattt atcgaacgcg gaaggcataa
     7021 aggaagcggc aaggcttaag gcgcacaatg cggcgaggaa gccgaactgt acgcgcgggc
     7081 ttttgcgggc gacaagcagc agcaatatcg gaaagacaaa gtaaaattgt tcttcgaccg
     7141 acaaagacca aatgtgcagc aagggctttt cttcctgcgc gggatcgaaa taatccttcc
     7201 cccttgcaaa atacaggttg gaggcgaaac ccaaggcggt cagcgcggat ttccataaaa
     7261 gaaagaaatc atctttggtg aataaaaaga agccgcctgt cagcgttgcc gccaatacgg
     7321 cgaaaaatgc gggcagaatc cgcttgatgc ggcggatata aaatgccttc agggaaaacc
     7381 tccccccccc ccccgacatt tcgcggtgaa gaatcatcgt catcaaaaag cctgaaatca
     7441 cgaagaatat atcgacaccg agaaacccgc ccggcagcca atttttttcg atatggaaca
     7501 cgatgacgga caagacggcg gcggcgcgca atgtgtcgat gtccgggcgg tagggtaagg
     7561 cttggctcat aatgtt
//
LOCUS       DAWKOX010000098         7564 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.098, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000098 DAWKOX010000000
VERSION     DAWKOX010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7564)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7564)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7564
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.098"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            15..419
                     /locus_tag="WJK78_001384"
     CDS             15..419
                     /locus_tag="WJK78_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ7598307.1"
                     /translation="MGSLFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAG
                     HGILYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGW
                     LLFAAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WJK78_001385"
     CDS             complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WJK78_001385"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ7598308.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGQLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMVELFPERRLMLAREITKTFETFLSGTVGEIQT
                     VLSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYDLALSWKNK"
     gene            1375..1722
                     /locus_tag="WJK78_001386"
     CDS             1375..1722
                     /locus_tag="WJK78_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ7598309.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1727..2320
                     /locus_tag="WJK78_001387"
     CDS             1727..2320
                     /locus_tag="WJK78_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ7598310.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAMCDCIDSVLLEGM"
     gene            2384..2992
                     /locus_tag="WJK78_001388"
     CDS             2384..2992
                     /locus_tag="WJK78_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ7598311.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3000..3668
                     /locus_tag="WJK78_001389"
     CDS             3000..3668
                     /locus_tag="WJK78_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598312.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKEKETPKENHTKPDTPKNTPPKPHKEIL
                     DNLF"
     gene            3708..4487
                     /gene="map"
                     /locus_tag="WJK78_001390"
     CDS             3708..4487
                     /gene="map"
                     /locus_tag="WJK78_001390"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ7598313.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4642..4941
                     /locus_tag="WJK78_001391"
     CDS             4642..4941
                     /locus_tag="WJK78_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ7598314.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5179..5553
                     /locus_tag="WJK78_001392"
     CDS             5179..5553
                     /locus_tag="WJK78_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ7598315.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5740..7206)
                     /locus_tag="WJK78_001393"
     CDS             complement(5740..7206)
                     /locus_tag="WJK78_001393"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ7598316.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLRAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1966 a         2275 c         1846 g         1477 t
ORIGIN      
        1 aagaggcgga atgggtgggc agcctgttcg gcctgcacaa atctttcggt ttccttacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cggttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgccgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaagtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgt cggacacgtc gccatggtcg
      361 tcgtccaccg tgttcaaggc aaagacgtgc tgtaccgcat gacggggcgt gtccgttgat
      421 tccgttcgca ctatggtgcc ggtccgtccg gcatcatttg tttttccaag acagtgccag
      481 atcgtacaaa gctttttttc cctcgcccgt gattttggcg gcaagctccg ccgcctgttt
      541 ggtcggcagc tcggctgtga ggattttcat gatgttttgc gcggactcgg acaagccttc
      601 gtgtttttca tcctgcgccg gataaagcac caacaccatc tcgccgcgcg attggttgcc
      661 gtcggcagac aataccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt
      721 tttcgtaatt tcgcgcgcca gcattaatcg gcgttcgggg aacaattcca ccatatcggc
      781 aagcgttgcc ccgattcggt gtggcgtttc aaacatgacg ataggaaatg ccgcccgcac
      841 ccatttggca aacaatttcc tacgttcgcc cgatttcggc ggtacaaaac cgttgaaata
      901 aaaatcggat cccgccacac cagccacact caaagccgcc atcaccgcgc ttgcgccgac
      961 aacagggaca actttaaacc cgacctcacg cacgcggcgg gcgagtttcg cgcccgggtc
     1021 gcacacggcc ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata
     1081 gccgacaatc ttgtccgcca tctgccgttc gttgtgttcg cgcacgctga cgagttggcc
     1141 ctgaatgccg tacgcgctca aaagctgcgc ggtaacgcgc gtatcttcgg cacagatgat
     1201 gtccgccttt tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg
     1261 cgtggcaacc acgtataatg tccctccgac gacgctgtcg gaggctttct gcaaatgttt
     1321 ctgaaacata agaatgccgt ctgaaaaaca aacattataa aggttaaacc gattatgcgc
     1381 ctaaaccaca aacagggcga ggcaggggaa gatgccgcgc ttgccttcct ccaatcccaa
     1441 ggctgcacac tgcttgcccg caactggcac tgcgcctacg gcgaaatcga cctgattgtc
     1501 aaaaacggcg gcatgattct gtttgttgaa gtaaaatacc gcaaaaatcg gcaattcggc
     1561 ggtgccgcat acagcatttc cccatccaaa ttattgaaac tgcaacgaag tgtagagtat
     1621 tatctgcaac agaacaggtt gacaaacgta ccgtgccgcc tcgacgcggt actcatcgaa
     1681 ggcagccgcc cgcccgagtg gatacagaat attacaggtt gacgatatga cgacattaca
     1741 agaacgcgtt gccgcccatt ttgccgaaag catccgtgcc aagcaggaag ccggaaaagt
     1801 attggtcgag ccgaccgtac aggctgccga gctgatgctg caatgcctga tgaatgacgg
     1861 caaaatcctg gcctgcggca acggcggttc ggctgccgac gcgcaacact tcgccgccga
     1921 aatgaccggc cgttttgaaa aagaacgcat ggaactcgcc gctgtcgcgc tgacaacaga
     1981 cacttccgcg ctgacagcca tcggcaacga ctacggtttc gaccacgtat tcagcaaaca
     2041 ggtgcgcgcg ctcggacgtg caggcgatgt attggtcggc atttccacct ccggcaattc
     2101 cgccaacgtc atcgaagccg tcaaagccgc acacgaacgc gatatgcacg tcatcgcctt
     2161 gaccggccgc gacggcggca aaatcgccgc catactcaaa gacaccgacg ttttgctcaa
     2221 cgttccccat ccgcgcaccg cccgtattca agaaaaccac atcctgctga tacacgccat
     2281 gtgcgactgt atcgactccg tactgctgga aggaatgtaa cccttttcag acggcatggc
     2341 gcaaagcaat gccgtctgaa acgcccaaga aaggaagcac ccgatgaaac ccaaaccgca
     2401 caccgtccgc accctgattg ccgccatttt cagccttgcc cttagcggct gcgtcagcgc
     2461 agtaatcgga agcgccgccg tcggcgcgaa atccgccgtc gaccgccgaa ccaccggcgc
     2521 gcaaaccgac gacaacgtta tggcgttgcg tatcgaaacc accgcccgct cctatctgcg
     2581 ccaaaacaac caaaccaaag gctacacgcc ccaaatctcc gttgtcggct acaaccgcca
     2641 cctgctgctg ctcggacaag tcgccaccga aggcgagaaa cagttcgtcg gtcagattgc
     2701 acgttccgaa caggccgccg aaggcgtata caactacatt accgtcgcct ccctgccgcg
     2761 cactgccggc gacatcgccg gcgacacttg gaacacatcc aaagtccgcg ccacgctgtt
     2821 gggcatcagc cccgccacac aggcgcgcgt caaaatcgtt acctacggca acgtaaccta
     2881 cgttatgggc atcctcaccc ccgaagaaca ggcgcagatt acccaaaaag tcagcaccac
     2941 cgtcggcgta caaaaagtca tcaccctcta ccaaaactac gtccaacgct gactcggcaa
     3001 tgccgtctga accgccttca gacggcattg cccgacaccc caaaagcaca atcaaaatgg
     3061 caaaaaaacc gaacaaaccc ttcaggctga cccccaaact cctgatacgt gtcgtattgc
     3121 tcatctgtat caccgccatc ggcgcattgg caataggcat cgtcagcaca ttcaacccga
     3181 acggcggcaa aaccctccaa accgaaccgc aacacaccga cagcccccgc gaaaccgaat
     3241 tctggctgcc aaacggcgta gtcggacaag atgccgccca acccgaacac caccacgccg
     3301 cctcatccga acccgcacag ccggacggca cagacgaaag cggcagcgga ctgccgtccc
     3361 ctgccgcacc caagaaaaac cgggtcaaac cgcaacctgc cgacacagct caaaccgaca
     3421 ggcagccgga cgacgccgga acacaagctg aaaacacact caaagaaacc cccgtactgc
     3481 ccacaaacgt cccccgtccc gaaccccgaa aagaaacacc cgaaaaacag gcgcagccca
     3541 aagaaacacc caaagaaaaa gaaacgccca aagaaaaaga aacgcccaaa gaaaaccata
     3601 ccaaaccgga caccccgaaa aacacgccgc ccaaacccca taaagaaatt ctcgacaacc
     3661 tcttctgacc cggcacggca ggcacacccg caatccaagg aagcattatg aacggcatca
     3721 tcatcaaaac ccccgaagaa atcgaaaaaa tgcgcgagct gggcaaactc gtcgccgaag
     3781 ccctcgacta catcggacaa ttcgtcaaac ccggcgtaac caccgacgaa atcgacaaac
     3841 tcgtttacga ctaccacgtc aacgtccaag gcggctatcc cgcccccctg cactacggca
     3901 acccgcccta ccccaaatcc tgctgcacct ccgtcaacca cgtcatctgc cacggcattc
     3961 ccgacgacaa gccgctcaaa gaaggcgaca ttatcaacat cgacctcacc atcaaaaaag
     4021 acggcttcca cggcgactcc agccgtatgt ttaccgtcgg caaagtctcc cccatcgccc
     4081 aacgcctgat cgacgtaacc cacgcctcca tgatggcggg catagaagcc gtcaaacccg
     4141 gcgcgacact gggcgacgta ggttacgcct gccaacaggt tgccgaaaac gccggctatt
     4201 ccgtcgtaca ggaattctgc ggacacggca tcgggcgcgg tttccacgaa gccccgcaag
     4261 tgttgcacta cggaaaaaaa ggacagggcc ccgttctaaa accgggtatg atttttaccg
     4321 tcgaaccgat gatcaaccaa ggcaaacgcc acctgcgtat cctcaacgac ggctggacgg
     4381 tggttaccaa agaccgctcc ctctccgccc aatgggaaca cgaagtcttg gtgaccgaaa
     4441 ccggctacga aatcctcacc gtcagccccg cctccggcaa accctgaaac cggacgtatc
     4501 cgccccataa aaacaaacaa tgccgtctga aagaaacggc agatatgata tataatataa
     4561 aaacaggctt gacccggcac attacgaaaa caaagcaaat cggaatttgc cccgcaacca
     4621 gacaaactta aaggaagttt tatgaaaata tttgaaaata tagaagatgt taaagccatc
     4681 cgtaaaaaga ccgggctgaa ccagatagac ttctggggca aggtcggcgt tacccagtct
     4741 ggaggctcgc gctacgaaac cggccgcaaa atgcccaaac ccgtacgcga actgctccgc
     4801 ctcgtccata tcgaatgcat cgatttggcg aaagtcaaca aaaaagatat ggaaatcgcc
     4861 gccctgttga aaaaacacca tcccgacctg tatgccgaat tgtccaaaca gaccaagtcc
     4921 gaaagaaaaa aacaaagtta aaccgcaacc tccggatgcc cgaaggtttt tcatttccga
     4981 aaaacgcaaa caatgccgtc tgaaacaccg gacaggccgc cgtatcccgc ctgccgcccc
     5041 tgcctcaaac cgccgaaccg cccgaacccg cctttttaca aactttatcc aatttcctgt
     5101 ttatttcagg atacgccgac attagaatgt caaacagctc gaaacgggca aactccacat
     5161 ccatccaaag gaataaaaat gaaacttctg accaccgcaa tcctgtcttc cgcaatcgcg
     5221 ctcagcagta tggctgctgc tgccggcacg aacaacccca ccgttgccaa aaaaaccgtc
     5281 agctacgtct gccagcaagg taaaaaagtc aaagtaacct acggcttcaa caaacagggc
     5341 ctgaccacat acgcttccgc cgtcatcaac ggcaaacgcg tgcaaatgcc tgtcaatttg
     5401 gacaaatccg acaatgtgga aacattctac ggcaaagaag gcggttatgt tttgggtacc
     5461 ggcgtgatgg atggtaaatc ctaccgcaaa cagcccatta tgattaccgc acctgacaac
     5521 caaatcgtct tcaaagactg ttccccacgt taatcaggca acaaaaaaca gcgttttcag
     5581 aaatgaaaac gctgtttttt gactgttcca ttattcacaa aagggaaaaa acgattacct
     5641 gccccgtgta ccaaaacctg ccctgccgga tgaagggcat aaccggcagg gacggcatca
     5701 acaccatatg ggggtacggc ttttcttgaa agattcggct taaatatcca acactttcgc
     5761 ggtataggcg ataatttcat ccgccctttc agggttttcg ttcaacttga tgccgtaacc
     5821 cggtaccagc tctttcagac gaccttccca agacggggcg cgctcgggga agcattggtg
     5881 catcagccgg atcatcagcg gcacagcggt cgatgcgccc ggcgacgcgc ccagcaatgc
     5941 ggcgagtgag ccgtcggcgt gggcgacaat ctccgtacca aactggagca cgccgccttt
     6001 ttcggagtct tttttaatga tttggacgcg ttgccctgcg gtgatgagtt cccagtcgtc
     6061 ggggtttgcc tcggggtagt attccagcag ggaggcgaag cgttcttctt tggttttacg
     6121 caattcgccc agcaggtatt tggtcagcgg catattcgcc cagccggcgc gcagcatagg
     6181 atagagattg tccatatgga tggacagcgg caaatccata agcgagcctt gcttgaggaa
     6241 gttggaacgg aagcctgcgt aagggccgaa cataaggtgg cgtttgccgt ccacgttgcg
     6301 tgtgtcgagg tgcgggacgg acatcggcgg cgcgccgacg gaagcctgcc cgtacacttt
     6361 ggcgttgtgt tgttcggcgg tttcggggtt gctgttgcgg aagaacaggc cggacacggg
     6421 gaagccgccg tagcctttgc cttcggggat gccggatttt tgcagcaggg tcagcgcgcc
     6481 gccgcccgcg ccgaggaaga ggaagcgggt acggagggtg agctgcccgt cggggttgcg
     6541 ggtatcggcg gttttgagca cccacgcgcc gtcggattcg cgtttgatgt cttcgacgtg
     6601 gcggttgaac tcggttttta cgcccttgcc ctgcaaatat ttcaccattt ggcgcgtcag
     6661 ccgtccgaaa tcgacatccg tgccttcggc ggagtagttg gcggcgacgg gttggttttc
     6721 gtcccggccg cgcatcatca gcggagccca atcggaaatt ttgttccgat cggtggaaaa
     6781 ttccatattt tcaaaaagtt tttgggtttt aaacgcgtca taacgttttt gaagataaga
     6841 acaatggtct tcattcatca ccaaagacat atgcggcacg gcattgatga aggaattgtc
     6901 ttccaacttg ccttccgcga ccagcgtcgc ccaaaactgg cggctgacat gaaactgttc
     6961 ggcaatattg agggcgcgcg ccggatcgat aatcccattt gcacccaacg gcgcatagtt
     7021 caattcgcac agcgcggaat gccccgtgcc ggcgttgttc cacgcgtttg acgattccaa
     7081 cgccacatct tccaagcgtt caatcagggt gatttcccaa gacggttcga gttctttgag
     7141 caaaacgccc aaagtcgcgc tcataatgcc gccgcccacc aagacaacgt ctgtcgcttc
     7201 agccatggtt tactcctaaa aaacaggcat cttctgccct tatggttatt tgccgtacta
     7261 caaacgcctg aatcgcaaaa gcagggaaaa ccggcaatgg tgtgtgtccg agtatgctgt
     7321 ttcggggttg gaatgcgttg caagcatggc ttccgacacc gcttcagggg cttgtaatat
     7381 gttatcgtga atgtagtgga ttttactggg aaatgcaaag tttttctgtc gcccgccaag
     7441 tcgggaaact gcgaaatgaa aaataaaaat agttatttat ctatatatat caaattttta
     7501 atagataaaa aatcaaaatt gtttatatat taatttttaa aagattgtca gcatattgcg
     7561 ttaa
//
LOCUS       DAWKOX010000099         7488 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.099, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000099 DAWKOX010000000
VERSION     DAWKOX010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.099"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            161..1504
                     /locus_tag="WJK78_001394"
     CDS             161..1504
                     /locus_tag="WJK78_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ7598317.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAAPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVVALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1507..2739
                     /locus_tag="WJK78_001395"
     CDS             1507..2739
                     /locus_tag="WJK78_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ7598318.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGVQAFGALTPDLLQQNIANDWHYTLAD
                     ALGINMSSEASVLGKMLFGAIYFLPIYATVFAVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2732..3508
                     /locus_tag="WJK78_001396"
     CDS             2732..3508
                     /locus_tag="WJK78_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ7598319.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVADAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            3508..4134
                     /locus_tag="WJK78_001397"
     CDS             3508..4134
                     /locus_tag="WJK78_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ7598320.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4138..4731
                     /gene="nqrE"
                     /locus_tag="WJK78_001398"
     CDS             4138..4731
                     /gene="nqrE"
                     /locus_tag="WJK78_001398"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ7598321.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4745..5962
                     /gene="nqrF"
                     /locus_tag="WJK78_001399"
     CDS             4745..5962
                     /gene="nqrF"
                     /locus_tag="WJK78_001399"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ7598322.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVSVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6115..7170
                     /locus_tag="WJK78_001400"
     CDS             6115..7170
                     /locus_tag="WJK78_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ7598323.1"
                     /translation="MPSETRLPNFIRVLIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            7196..7411
                     /gene="nqrM"
                     /locus_tag="WJK78_001401"
     CDS             7196..7411
                     /gene="nqrM"
                     /locus_tag="WJK78_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ7598324.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
BASE COUNT         1819 a         2041 c         1897 g         1731 t
ORIGIN      
        1 ggcttccgca aggaaaaaag cagcaaatct gacaaacagg tacaattcct gatagaatct
       61 aacactttgc tacattaatt tattcaatgc ttttgatgcc acgcgacacg gtatcaaaac
      121 acgccgtttt taccttaacc atcacaagta atgcaaatat atgattaaaa tcaaaaaagg
      181 tctaaacctg cccatcgcgg gcagaccgga gcaagtcatt tatgacggcc cggccattac
      241 cgaagtcgcg ttgcttggcg aagaatatgc cggtatgcgc ccctcgatga aagtcaagga
      301 aggcgatgcc gtcaaaaaag gccaagtgct gtttgaagac aaaaagaatc cgggcgtggt
      361 gtttaccgcg ccggcttctg gcaaaatcgc cgccatccat cgcggcgaaa agcgcgtact
      421 tcagtcagtc gtgattgccg ttgaaggcaa cgacgaaatc gagtttgaac gctacgcacc
      481 cgaagcgttg gcaaacttaa gcggcgaaga agtgcgccgc aatctgatcc aatccggttt
      541 gtggactgcg ctgcgtaccc gtccgttcag caaaatccct gccgtcgatg ccgcgccgtt
      601 cgccatcttc gtcaatgcga tggacaccaa tccgctggcg gcagaccctg tggttgtgat
      661 caaagaagcc gccgaggatt tcagacgagg tttgctggta ttgagccgtt tgaccgagcg
      721 taaaatccat gtgtgtaaag cagcaggcgc agacgtgccg tctgaaaacg ccgccaacat
      781 cgaaactcat gaatttggcg gcccgcatcc tgccggtttg agtggcacgc acattcattt
      841 cattgagcct gtcggtgcga acaaaaccgt ttggaccatc aattatcaag atgtaattgc
      901 catcggacgt ttgtttgcaa caggccgtct gaacaccgag cgcgtggttg ccttgggtgg
      961 ttctcaagtc aacaaaccac gcctcttgcg taccgttttg ggtgcgaaag tatcgcaaat
     1021 tactgcgggc gaattggttg acgcagacaa ccgcgtgatt tccggttcgg tattgaacgg
     1081 cgcgattgca caaggcgcgc acgattattt gggacgctac cacaatcaga tttccgttat
     1141 cgaagaaggc cgcagtaaag aactgttcgg ctgggttgcg ccacaaccgg acaaatactc
     1201 gatcacgcgt acgaccctcg gtcatttcct gaaaaacaaa ctcttcaagt tcacgacagc
     1261 cgtcaacggt ggcgaccgcg ccatggtgcc gattggtact tacgagcgcg taatgccgct
     1321 agacatcctg cctaccctgc ttttgcgcga tttaatcgtc ggcgataccg acagcgcgca
     1381 ggcattgggt tgcttggaat tggacgaaga agacctcgct ttgtgcagct tcgtctgccc
     1441 gggcaaatac gaatacggcc cgctgttgcg taaggtgctg gaaaccattg agaaggaagg
     1501 ctgattatgg gcttgaaaca ttttctggaa aaaatcgaac cgcacttcct gccaggcggc
     1561 aaacatgaaa aatggtatgc cctctacgaa gctgcggcga cgattttcta tacatccggt
     1621 gcggtaacgc gcaaagcggc acacgtccgc gatgcgctcg actccaaacg catgatgatt
     1681 ttggtgtggc tggctttgtt ccctgccatg ttctacggta tgtacaacgt cggcgtacag
     1741 gcattcggtg cgttaacgcc tgatttgctg caacaaaaca tcgccaacga ctggcattac
     1801 acccttgccg acgctttggg catcaatatg tcgtctgaag cgagcgtgtt gggcaaaatg
     1861 ctgttcggcg cgatttactt cctgccgatt tacgcgaccg tatttgccgt cggcggtttc
     1921 tgggaagtct tgttcgccac cgtgcgcaaa cacgaaatca acgaaggttt ctttgttacc
     1981 tcgattctgt ttgccttaat cgttccgccc acgctgccgc tgtggcaggc ggctttgggt
     2041 atttctttcg gcgttgtggt tgcgaaagaa gtattcggcg gtacgggtaa aaactttatg
     2101 aaccctgcgc tggcaggccg cgccttcctg ttcttcgcct accccgccaa cttgagcggc
     2161 gatgcggttt ggacggcggt tgacggctat tccggcgcaa ccgcgctggc gcaatgggcg
     2221 gcacacggtg cagacggcct gaaaaacgcc gtaaccggtc aaaccatcac ttggatggac
     2281 gcgtttatcg gcaaactgcc cggctccatc ggcgaagtct ccactttggc actcttaatc
     2341 ggcggcgcgt ttatcgtgtt tgcccgcatc gcttcttggc gcattattgc cggcgtgatg
     2401 atcggtatga ttgcgatgtc ttcgctgttc aacttcatcg gttcggacac caacgctatg
     2461 tttgctatgc cttggtactg gcatttggtc gtcggcggct tcgccatcgg tatgctgttt
     2521 atggcgaccg accccgtttc cgcttccttt accaatgtcg gcaaatggtg gtacggcgca
     2581 ctgatcggtg tgatgtgcgt attaatccgc gtggtcaatc cggcttaccc cgaaggcatg
     2641 atgttggcga ttctgtttgc caacctgttt gccccgattt tcgactattt cgtcgcacaa
     2701 gcgaacatca aacgcagaaa ggcgcgcagc aatggctaag aaattcgata aagacagctt
     2761 cagcggtacg ctgattgtcg tgttggcggt cagcctgatt tgctcggtca tcgttgccgg
     2821 tgcggtcgtc ggcttgaaac ccatccaaga gaaacaaaaa ctccaagaca aacaaggcta
     2881 tatcttgagc gtagccggtt tgatggataa ggacaccgac atcggtaaaa cctttgccga
     2941 gcgtatcgag caacgtgttg tcgatttggc gaccggcgaa tacgtcgccg atgcgcctaa
     3001 agacttcagc gcgcgcatcg caggcaaaga ccctgcccaa agcatccgca tcaaacccga
     3061 agacgatttg gcaggcatca aaagccgtgc caaatacacc gaggtttatt tggtaaaagg
     3121 cgaagacggc aaaatcgggc aaatcatcct gcctatgcac ggtaacggtt tgtggtcggt
     3181 catgtacggc tttgtcgcca tccagcccga cggcaacacc atcaacggca ttacctacta
     3241 cgaacaaggc gaaaccccgg gcttgggcgg cgaaatcggc aatccgttgt ggcagcaaaa
     3301 attcgtcggc aaaaaactgt ttgacggaca aggcaaactc gccctgcacg tcggcaaagg
     3361 cgcgggttcg gacaaagaac acggcgtaga tgccctctcc ggcgcatcgc tgacatccaa
     3421 aggcgtgcaa ggttcgttcg cctactggtt cggcgaaaac ggctatatcc cctacctgaa
     3481 caaattgaaa tcagcaggag cgcaataatg gctgatatga aacgcttgaa acatttgatg
     3541 ttttcaccct ttatcgacaa caacccgatt gccttgcagg ttttgggtat ttgttcggct
     3601 ttggcggtta ccaccaaact tcagacggcc atcgtgatgg gtatttccgt agctttggta
     3661 accggttttt ccagcttctt catttcgctg gtacgcaact acatccccaa cagcatccgt
     3721 attatcgtgc aaatggcgat tatcgcgtcg ctggttacgc tggtcgacca actcttgcag
     3781 gcatttgcct acgaattgtc caaacagctt tccgtattcg tcggtctgat tattaccaac
     3841 tgtatcgtga tgggccgcgc cgaagcattt gcgatgaaag agccgccgct ggaaagcctg
     3901 atcgacggca tcggcaacgg cgcgggctac gggatgatgc tgcttgtcgt cgccaccgtc
     3961 cgcgaactga tcggctcggg caaactcttg ggctacaccg ttttccaaac cgtgcaggac
     4021 ggcggctggt atcagaccaa cggcttgttc ctgctcgccc ccagcgcgtt cttcatcatc
     4081 ggctttttga tttggggact gcgtacctgg aaacccgaac aggcggagga ataagctatg
     4141 gaacactatt tgagcctctt catcaaatcc gtcttcattg aaaatatggc actatccttc
     4201 tttttgggta tgtgcacgtt tttggcggta tccaaaaaag tatccaccgc attcggtttg
     4261 ggtgtggcgg taattttcgt actcgggctg tccgtccctg tcaaccaact cgtttactcg
     4321 ctgctcaaag acggcgcgat tgtcgaaggc gtggatttga cctttttgaa attcatcacc
     4381 ttcatcggcg tgattgccgc tttggtgcag attttggaaa tgttcttgga taaattcgtc
     4441 cccgccctct ataacgcgtt gggcatctac ctgccgctga ttaccgtgaa ctgcgcgatt
     4501 ttcggcgccg tatcgtttat ggcgcaacgc gaatacaact tcggcgagtc cgttgtatac
     4561 ggcttcggcg cgggcttggg ctggatgttg gcgattgtcg ctttggcggg cattaccgaa
     4621 aaaatgaaat attcggacgc tcccaaaggc ctcaaaggct tgggcattac ctttatcgcc
     4681 gccggcctga tggcgatggc gtttatgtcg ttctccggca tccagttata agaaagggac
     4741 cggtatggag attattttag gtatcgtgat gtttaccgtc atcgttttgg ttttggcact
     4801 gatgattcta tttgccaaat ccaaactggt cagcgaaggc gacatcacca tcaaagtcaa
     4861 cggcgaaaaa gagctgacga tgcccgccgg cggcaaactc ttgggcgcgc ttgccaacga
     4921 aggcatcttt atcccctccg cctgcggcgg gggcggttcg tgcggacaat gccgcgtcgt
     4981 cgtaaaaagc ggcggcggcg acatcctgcc gaccgagctg tcccacatca gcaaacgcga
     5041 agcacgcgaa ggctgccgtc tgtcgtgcca agtcagcgtc aaaaccgaca tggacatcga
     5101 agtgcccgaa gaagtgttcg gcgtgaaaaa atgggaatgc accgtcatct ccaacgataa
     5161 caaagccacg ttcattaaag aactcaagct tgccattccc gaaggcgaag aagtcccctt
     5221 ccgcgccggc ggctacattc aaattgaagc tcctcctcac actgttgcct acaaagactt
     5281 cgacattcct aaggaatatc acgaagactg ggacaaatac aatttgtggc aatacgtttc
     5341 caaagtggac gagccgattt tgcgtgccta ctctatggct tcgtatcctg aagaaaaagg
     5401 catcattatg ctgaacgtgc gtatcgccac gccgcccccg cgcgtacctg atgcgcctcc
     5461 gggacaaatg tcgtcctaca tctggtcgct caaacccggc gacaaagtta cgatttccgg
     5521 cccgttcggc gaatttttcg ccaaagacac cgatgccgaa atggtattta tcggcggcgg
     5581 tgcgggtatg gctccgatgc gttcccacat tttcgaccag ttgaaacgtt tgaactccaa
     5641 acgtaagatt accttctggt acggcgcacg ttccaaacgc gagatgttct atgtcgaaga
     5701 ctttgaccaa ctcgcggcag agttcccgaa cttcacgtgg cacgtcgccc tgtccgaccc
     5761 gctgccggaa gacaactggg acggctacac gggcttcatt cacaacgtgg tttacgaaaa
     5821 ccacctgaaa aaccacgaag caccggaaga ctgcgaattt tatatgtgcg gccctccgat
     5881 tatgaaccag tccgtcatca aaatgctcaa agacttgggc gtggaagacg aaaacatcct
     5941 cttggacgat ttcggcggtt aaatattcgg cttcaaatac aaaaggaaga aacctcggtt
     6001 tcttcctttt tctatgccga tgccatccga acacccttca gacggcatcg gcatagaaac
     6061 ataccggccg ttttgcgata taattcaaac catttgccaa aaccgtcaaa cactatgccg
     6121 tctgaaacac gcctgccgaa ctttatccgc gtcttgatat ttgccctggg tttcatcttc
     6181 ctgaacgcct gttcggaaca aaccgcgcaa accgttaccc tgcaaggcga aacgatgggc
     6241 acgacctata ccgtcaaata cctttcaaat aatcgggaca aactcccctc acctgccgaa
     6301 atacaaaaac gcatcgatga cgcgcttaaa gaagtcaacc ggcagatgtc cacctatcag
     6361 cccgactccg aaatcagccg gttcaaccaa cacacagccg gcaagcccct ccgcatttca
     6421 agcgacttcg cacacgttac tgccgaagcc gtccgcctga accgcctgac acacggcgcg
     6481 ctggacgtaa ccgtcggccc cttggtcaac ctttggggat tcggccccga caaatccgtt
     6541 acccgtgaac cgtcgccgga acaaatcaaa caggcggcat cttatacggg catagacaaa
     6601 atcattttga aacaaggcaa agattacgct tccttgagca aaacccaccc caaggcctat
     6661 ttggatttat cttcgattgc caaaggcttc ggcgttgata aagttgcggg cgaactggaa
     6721 aaatacggca ttcaaaatta tctggtcgaa atcggcggcg agttgcacgg caaaggcaaa
     6781 aacgcgcgcg gcgaaccgtg gcgcatcggt atcgagcagc ccaatatcgt ccaaggcggc
     6841 aatacgcaga ttatcgtccc gctgaacaac cgttcgcttg ccacttccgg cgattaccgt
     6901 attttccacg tcgataaaaa cggcaaacgc ctctcccata tcatcaaccc gaacaacaaa
     6961 cgacccatca gccacaacct cgcctccatc agcgtggtcg cagacagtgc gatgacggcg
     7021 gacggcttgt ccacaggatt attcgtattg ggcgaaaccg aagccttaaa gctggcagag
     7081 cgcgaaaaac tcgctgtttt cctgattgtc agggataaag gcggctaccg caccgccatg
     7141 tcttccgaat ttgaaaaact gctccgctaa acatacaaac cgattaggaa acaccatgaa
     7201 aaccctgctc cttaccttcg gcatcttcct gaccgtcatc atcggtatgg cggtcggcta
     7261 tattttctcc aaacgcagca tcaaaggcag ttgcggcggc attactgcct tgggtatgaa
     7321 aaaaatgtgc gactgcgaca caccttgcga caccctgcaa aagaaactgg atgaagaaaa
     7381 acaggcaggc ggcatacggg ttgaccgtta acgccgaaat atagtggatt aacaaaaacc
     7441 agtacagcgt tgcctcgcct tagctcaaag agaacgattc tctaaggt
//
LOCUS       DAWKOX010000100         7308 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.100, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000100 DAWKOX010000000
VERSION     DAWKOX010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7308
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.100"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            49..1557
                     /gene="nadB"
                     /locus_tag="WJK78_001402"
     CDS             49..1557
                     /gene="nadB"
                     /locus_tag="WJK78_001402"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ7598325.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRTILSQGKLAIEWLLAQGVAFDQ
                     NNNGLHLTREGGHTCRRIAHVADYTGEAVMQSLTVQIRCRPNIRVCEQQMALDIQTES
                     GAACGLTVLDCRTQATYSIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARSSENGRTFLISEAVRGEGGILTNQAGERFMPYYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYSLGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAKTSPRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRC
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            complement(1735..2400)
                     /gene="pgmB"
                     /locus_tag="WJK78_001403"
     CDS             complement(1735..2400)
                     /gene="pgmB"
                     /locus_tag="WJK78_001403"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ7598326.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRRKNDNYLEMIQAVKPEDVYLGILPLLEA
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPIGVGKAEDLGSDIALVSDTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(2413..4671)
                     /locus_tag="WJK78_001404"
     CDS             complement(2413..4671)
                     /locus_tag="WJK78_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ7598327.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFNVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALSGSQTDWQVSNSFEVEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKIAGVAFETLLEAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRSGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPYDEELGVFVQHDGFLDKGIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYQRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPGAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLDGSHAAALEK"
     gene            complement(4905..5915)
                     /locus_tag="WJK78_001405"
     CDS             complement(4905..5915)
                     /locus_tag="WJK78_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ7598328.1"
                     /translation="MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFS
                     VLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGR
                     NALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDRLTV
                     TYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDLEVF
                     DFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDRNGL
                     VIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTREATIAYGIES
                     LS"
     gene            complement(5919..7274)
                     /locus_tag="WJK78_001406"
     CDS             complement(5919..7274)
                     /locus_tag="WJK78_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ7598329.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
BASE COUNT         1599 a         2113 c         2046 g         1550 t
ORIGIN      
        1 ttaatccact ataccgtttc agacgatctc tcaaacaagg acaacaccat gcaaaccgat
       61 tgcgacgtat tgattgccgg aaacgggctg gcggcactga cgctcgccct gtcgctgcct
      121 gaatcgttcc gcatcgtcat tttgtgcaaa aaccggctgg acgacactgc cagccgtcat
      181 gcgcaaggcg ggattgcggc ggcgtggtcg ggagaggacg acatcgaaaa acacgttgcc
      241 gataccttgg aggcgggcgc gggtttgtgc gacgaagccg ccgtccgcac catcctgtcg
      301 cagggcaaac tggcaatcga atggctgctg gcgcagggcg tggcgttcga ccaaaataat
      361 aacggcctgc acctgacgcg cgaaggcggg cacacctgcc gccgaatcgc ccacgtcgcc
      421 gactacacgg gcgaagccgt catgcagagc ctgactgtcc aaatacgctg ccgcccgaac
      481 atccgcgttt gcgagcagca gatggcgttg gacatccaaa ccgaatcagg tgcggcgtgc
      541 ggactgaccg tcctcgactg ccgaacgcaa gcaacctaca gcatccgcgc ccgccatacc
      601 gtactcgcag gcggcggctt gggacagatt tacgccgcca ccaccacgcc gcccgaatgc
      661 acgggcgacg ccatcgccat ggcgatacgc gcaggctgcg cagtcgaaaa cctcgaattt
      721 atccaattcc accccacagg cttggcaaga tcgtctgaaa acggccgcac cttcctgatt
      781 tccgaagccg tgcgcggcga aggcggcatc ctgaccaacc aagcgggcga acggtttatg
      841 ccgtattacg accgccgcgc cgaactcgcg ccgcgcgaca tcgttgcccg cgccatcgcc
      901 gccgaaatcg ccaaacaaac gcaagacttc gtctcactcg atatcagcca tcaacccgca
      961 gcgttcgtcc gccggcattt cccgtccatc catcggcact gtttatccca atgcggcctg
     1021 gatatcacgc gccaagccat ccccgtccgc cccgtgcaac actacacctg cggcggcatc
     1081 caaaccgacc cctgcggcag aacttccctg ccgcagctct actccttagg cgaaaccgcc
     1141 tgcaccggct tgcacggagc caaccgcctt gccagcaact ccctgctcga atgtgtcgtt
     1201 accgccagac ttgccgccca aaccatcgca gacggacaag cattccaagc caaaacgtct
     1261 ccaaggccgt ctgaaagcct ctcctccgaa gcaggcatct tttcagacgg catccaaagc
     1321 gcattcagcc gccccgtcct gcaagcgttc aaccaacgcc atctgggcat cctccgcaac
     1381 gataccggtc tgcgctgcgc catcgcccag ctgcggcttt ggaaacaaaa ccaaaccgaa
     1441 ccgcacaccg cgtccgaata cgaaaaccgc aacctgctcg aatgcagcct cgccgtcgcc
     1501 caagccgcat acaggcggag acagaacatc ggcgcgcatt ttaatagtga ttgttaaggt
     1561 tggctggtta gaaaaaaaat cgttcaaata aatttgaata gcatggttaa gaaattggca
     1621 tttagttttt agggttgcgt aagttgggtt atcaatctgt tctaaaagca gaaaggccgt
     1681 ctgaaacact gttcagacgg ccttttactt ccttgacact ttatctgacg cgttttacct
     1741 gcccgactgt gcccacacgt tttgcaggta ggcgtaggtc agctcggcgg tatcggacac
     1801 cagcgcgatg tcgctgccca agtcttcggc tttgcccacg ccgataggca aggcgccggc
     1861 ggctttgatg gcggcgacac ctgcggcagc gtcttcaatg ccgatgcagc ggcggatgtc
     1921 cgcgcccacg ccctcggcgg cggcgaggaa gatgtcgggg gcgggtttgg aatgcgcgac
     1981 ggcggcaggg tcggcgacgg tgtcgaagaa gtgggtcagc cccatgcgtt cgagcaggaa
     2041 ggggccgttt ttactggcgg acgcaagggc gatttttttg ccgtttgctt ttaatgcttc
     2101 cagcagcggc aaaatgccga gatacacgtc ttcgggtttg actgcctgta tcatctccaa
     2161 gtagttgtcg tttttgcggc gggtcagttc ggcgaactcg gcttcgccga cggttttacc
     2221 gccgtgcgcg aggatgcgtt tgagcgaatc gtcgcgcgac acgcctttga gctgctcgtt
     2281 aaacttgcgg tcgatgccga tgcccagttc ttcggcgagt tttttccacg cgcggtagtg
     2341 gtattcggcg gtgtcggtga tgacaccgtc gagatcgaag aggactgcgg taaacgtcat
     2401 tttgcaccct ccttattttt ccaacgcggc ggcgtggctg ccgtcgagcg tgatgtcttt
     2461 gccatacacc tgcaaatcga gcggctcgcc tttgagcagg gtgaagacga cgttttcttt
     2521 gccgacggcg actttaatca gacggcctcg gtagttgata tggaaggcgt agcctgtcca
     2581 tgcgcccggc aggaacggtg cgaagctgag tttaccgccc caagttttca tttgggcgaa
     2641 accttggacg atggcgagcc acgagccggt catagaagta atgtgcaggc cgtcttcggt
     2701 gtcgttgttg tagttgtcca agtccaggcg ggcggtgcgc tggtacattt ccacggcttt
     2761 ttcttctttg cccagttcgg cggcgagaat agagtggata caaggcgaca acgagctttc
     2821 atgcacggtc atcggttcgt agaagtcgaa gttgcggcgt ttttcgtcga tattgaaacg
     2881 gtcgccgaag aaatagatgc cttgcaatac gtccgcctgt ttgataaagg gcgaacgcag
     2941 gattttgtcc cacgaccatt tctggttgag cggcaaatcg tcgggcgaaa gcgcggacac
     3001 ggggcggatg cctttgtcga ggaagccgtc gtgttgcacg aatacgccga gttcttcgtc
     3061 atacggacgg tacatattcg cgctgatgtc cgcccatttt tccaactcgg cggcgctcac
     3121 gttcaaatcc ggacgcgggt atttcgccag ggcttcgcgg gtgtagtcca atacccatgc
     3181 ggcgagggtg ttggtgtacc agttgttgtt gatgttgttt tcgtattcgt tcgggccggt
     3241 tacgccgtga atcatgtatt tgccgctgcg tttggagaag tggacgcggt ccgcccagaa
     3301 gcgggacact tcgaccaaga cttccaagcc ttctttggca agatagccct cgtcgccggt
     3361 gtagttggtg tagttgtaga tggcgtaagg aatcgcgccg ttgcggtgga tttcctcgaa
     3421 ggtgatttcc cattcgttgt ggcactcgat gcccgtaaac gttaccatcg gatagagtgc
     3481 gcccgccaag ccctgttcgc gcgcgttgtg ttgcgcctgt ggcagttggt tgcggcggta
     3541 ttgcagcagg ttgcgggtaa cttcgggttc cgccagtgcg aggtagagcg gcacggcgta
     3601 ggcttcggtg tcccaatagg tcgcgccgcc gtatttttct ccggtaaagc ctttcgggcc
     3661 gatgttcagg cgcgcgtctt cgccgtagta ggtggagaac agttggaaca gattgaagcg
     3721 gatgccttgt tgcgcttcgt cgctgccttc aataaccacg tcggcgattt cccaacggtg
     3781 cagccagcct gctttgtgcg cctccagcaa ggtttcaaac gcaacgcctg cgattttttc
     3841 cgacaaggcg cggcctgcgg ctttcactgc ttccaagccc tgataatcgc ggctggtggt
     3901 aacaataacc cgtttttcaa aggttttggg cgtgccgccg acttcgacct cgaaagaatt
     3961 ggagacttgc cagtcggttt ggctgccgct gagggctttg aagctgccgg cgaaagtttg
     4021 ctcggcgttg acgataaatt gttccacgcc gaaagggttg gcaacggttt gggcggcaat
     4081 gtaggagaga ctgtctgaaa cgcctttgtc caatacctgc cagaattttt cttcgtagtt
     4141 ggagtcttcg tttttcacgt cggcatcgat gatggaatcg atgcggactt ggtgggtttt
     4201 gccgtcaacg gatacggctt cccagcggat aaccgccagc tctttttgcg cgacggacag
     4261 gaatttgcac acattgaaac gcacaccgaa tacggtgaac gagcggcgca acacgccgtg
     4321 ctgcatatcg agttcgacgg agaagccggc aacatcgttt ttcgccaagt ccacctcttg
     4381 tccgtcgaca aagattttga ctttgctgaa attgagcgcg ttgatggctt taccgaaata
     4441 tttggggtag ccgtttttcc accagccgac gcgggttttg tcgggaaacc acacaccggc
     4501 gatgtaggta cccaagtggc tgtcggcgga ataggtttcc tcaaagctgc cgcgcatacc
     4561 catatagccg ttgcccaaac tggtcaggct ctcttgcagc cgtttgtgtt ctttttccag
     4621 ctttgccgaa cgcagcgtcc aagggctgat ttccataatt cttgtgtaca tttatgaagc
     4681 tcctgtttgg attgatttga gggaatggtg aaatcttata gtggattaac aaaaatcagg
     4741 acaaggcgac gaagccgcaa acagtacaaa tagtacggaa ccgattcact tggtgcttca
     4801 gcaccttaga gaatcgttct ctttgagcta agccgaggca acgccgtacc ggtttttgtt
     4861 aatccactat aaaaaggccg tctgcaaccg gtgttaggaa gctcctaaga aagggattcg
     4921 atgccgtaag caatcgtcgc ctccctagta tcacccttgt tcagacgaat attgccgaac
     4981 tcgggccaat tcaggctgtc gggcagcgtc tgcgcctcgg tcgccagcgc gtcgtaaacg
     5041 cccgcatcgt gccgcgcgaa atcctgcggg gcggcggtaa agatgaccaa gccgttgcgg
     5101 tcgctgtata tgctgatacg acggcggcgt ccggcttgca acacagcggc gggacggcct
     5161 atatcggacg gcacgcggta agcgtcgtca aaaccggccc gacccgtttc gcggcgcagg
     5221 gcggcaacgg cggcatccag cggcttgggc cggctgaaat caaatacttc gaggtcgtct
     5281 gaaaccgttg agacgggcag tttttcggca tcggccggaa tatgtccgcc ctgcggaata
     5341 tgcagaaccg catcgtgcag gcccgcgtcc agccgccagt aaatgtgcag cgtcgggtcg
     5401 aacaccgtgt cgccgagcgc ggtggcgcga taggtaacgg taagccggtc gtcctcgtcc
     5461 aagcggtagg aaatatccaa atccaaatcg ttgggataac cgtcggccga ctgttgcagg
     5521 cggctgcgca gcaccaccga acggccgtct gccgccaccg cgttgaaacg ggtaacggcc
     5581 agcccgtgcg aaccgccgtg cagcgcgttc ctgccttcgt tggcctccac gcggtaagtc
     5641 ctgccgttga tgtcgaacgc cgcaccgcgg atgcgtccgg ccacgcgccc tatctgcttg
     5701 ttaatctgaa acggattgtc cgcataggaa gccgcatcgt cgaacgacac cacgaggttt
     5761 tcgcgcacgc cgtctgccaa aacggaaaat tcctgcacaa tcccgcccaa gtccagcacg
     5821 cagacacgcg taccacgccg gttggacagc acatagccgg ttacggcacg cccgtcgatc
     5881 aggccgaaat cgcgggtagc gggggtatcg ctcatcgctc aaaccccgcc gtgtgtttct
     5941 ttaatcagga acacggaaaa cgcgcccagc agcaggacga cgccccctac caagaacata
     6001 gtggcctgca agccgcccag catagggaaa agcacgaaac tcaacagcga agcgacgatt
     6061 tgcggcatac agatagagcc gttaaacagg cccaagtaag tgcccatatg cttgcccgac
     6121 aaggcgttgg ttacaatcgt cagcggataa gtgataatgc ccgcccaagc gatgccgatt
     6181 aaggtataag acaacaccag cgcgtattgg ttgccgatga agaaaacgga gaaaaagccg
     6241 agcgcgccca aagccaaaca gccgaaataa cccgccttat ggtatttatt cggcactttc
     6301 gccaatacaa acgaacaaat caccgccgca accgactgca ccgccgccaa aacgccgtac
     6361 cagttgcccg cctcctgata acctacggaa gacgcatcgg tggtgtgcca gacgttttcc
     6421 gcaatcgcgc ctgccgagta agtccacata tattggaagg cgaaccagca gaaaaactgt
     6481 accagagtaa ccgtccaaaa cgctttaggc gcggttttta agagttcgaa ccagttggct
     6541 ttttcctgat tcgcggcgac atcgatgccg tggtaacggg cgtaggtttc cggatcgtat
     6601 tccttcactt tgaaaatcgt gaacgcgctg gtaatcacca gcaacgccgc acccacataa
     6661 aacgccacga ccacggtctg cggcacaacg cctttctcgg cggtgttcgc caaaccgata
     6721 tacgcaaaca caaacggcag aatcgccgcc acgaccgcgc ccgtattcgc taagaaactt
     6781 tgaatcccgt aggcgtagcc tttctgctcc tcgttgacca tgtcgccgac catcatctta
     6841 aacggctgca tcgccatatt tgacgacacg tccaacagcg caatcatcag cgcgccgaac
     6901 gacaaagccg ccagcgacgc atagccgaaa ccgaagctgc ccgagttcgg catcaaaatc
     6961 atcacaataa ccgcaatcag cgtgccataa agcagatacg gcagacggcg gccgcccaaa
     7021 cgcggcttcc aagtgcggtc ggagtaatgg ccgacaatcg gctgcaccag catccccgcc
     7081 agcggcggca ggatgaaaaa ccagcccaaa ttgtgcgggt ctgcgcctag cgtttgaaaa
     7141 atgcggctca tttgcgagct ttgcagggta aaggccgtct gaacgccgag aaagccgaaa
     7201 ctgagcatcc aaatcgtgct ttttgccagc gcgggcaaac cttgttttgc tgtttgaggc
     7261 gtatattccg acataaggta aatccttttt tgatttgaaa agtatagt
//
LOCUS       DAWKOX010000101         7218 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.101, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000101 DAWKOX010000000
VERSION     DAWKOX010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7218
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.101"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(68..427)
                     /gene="rnpB"
                     /locus_tag="WJK78_001407"
     ncRNA           complement(68..427)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WJK78_001407"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(506..1609)
                     /gene="prfB"
                     /locus_tag="WJK78_001408"
     CDS             complement(506..1609)
                     /gene="prfB"
                     /locus_tag="WJK78_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ7598330.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1712..2605)
                     /locus_tag="WJK78_001409"
     CDS             complement(1712..2605)
                     /locus_tag="WJK78_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ7598331.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2947..3396
                     /locus_tag="WJK78_001410"
     CDS             2947..3396
                     /locus_tag="WJK78_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ7598332.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3470..3778
                     /locus_tag="WJK78_001411"
     CDS             3470..3778
                     /locus_tag="WJK78_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598333.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3894..4736
                     /locus_tag="WJK78_001412"
     CDS             3894..4736
                     /locus_tag="WJK78_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ7598334.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4726..5472
                     /locus_tag="WJK78_001413"
     CDS             4726..5472
                     /locus_tag="WJK78_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ7598335.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLST"
     gene            5494..6081
                     /locus_tag="WJK78_001414"
     CDS             5494..6081
                     /locus_tag="WJK78_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ7598336.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6087..6266
                     /locus_tag="WJK78_001415"
     CDS             6087..6266
                     /locus_tag="WJK78_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ7598337.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPHCREYKRQL
                     QTIKISLAKTTRTSK"
     gene            6498..6938
                     /locus_tag="WJK78_001416"
     CDS             6498..6938
                     /locus_tag="WJK78_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598338.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1842 a         1926 c         1632 g         1818 t
ORIGIN      
        1 cacaacctaa ataaaaatgc cgtctgaacc atatttcagg tttcagacgg catttgcgtg
       61 tcggatgcac accggacggg cggtaagccg ggttctgtct cggacagtca ttcctctagg
      121 cataccgtta ccggtatgct caagcaacct acccgaacgc tcggcgggca gcgtcattgc
      181 gttctgtttg gtcttgctcc gaatggggtt tggcctgccg catattgtta ccaaatgcgc
      241 ggtgcgccct taccgcacct tttcaccctt gcctgtgctg ccaaagcagc catcggcggt
      301 tttgctttct gttccacttt ccgtcgcgtt accgcgcccg gccgttaacc ggcattctac
      361 cctgcggagc ccggactttc ctccccgtat gccttacgcg atacgcggcg actgtctgcc
      421 cgtcccgtgt gcggcgcgga ttataacacg aaacgcaaaa atgccgtctg aaacggtaca
      481 ggtttcagac ggcatacagc ctaaactaca cgccctgttt caggctggct tcgataaagc
      541 cgtccaaatc gccatccaat acggctttgg tgttgccgac ttcgtagcct gtacgcaagt
      601 ctttgatacg tgaggaatcc aaaacatacg aacggatttg gctgccccaa cctacatcgg
      661 atttaccttc ttccaacgcc tgtttctctt cattgcgttt gcgcatttcc aattcataca
      721 gtttggactt caacatttcc atcgcggcgg ctttgttggc gtgttgcgaa cggtcgtttt
      781 gacattgcac cacaatcccc gtcggctcgt gggtaatgcg cacggcggag tcggttttat
      841 tgatgtgctg accgcccgca cccgatgcgc gataggtgtc gatgcgcaaa tcggcggggt
      901 tgatttcgat ttcgatggaa tcgtcgattt cgggatagac gaacacggag gcaaacgagg
      961 tatggcgttt gttgttcgag tcaaacggag agtaacgcac caagcggtga acacctgttt
     1021 ccgtgcgcag caagccgtag gcatattcgc cttccactcg gatagtcgcg cggttgatgc
     1081 ccgcgatttc gccgtcgtct tcttcgagga tttcgatttt gaagcctttg cgctcggcgt
     1141 agcggctgta catgcggaac agcatacccg cccagtcttc cgcttccgta ccgcctgcgc
     1201 ctgcggtaat gtcgataaag cagttgttcg gatcggcggg ctggttgaac atccgtttga
     1261 actccaaatc cgccatctgt ttttccagcc ccgccacatc ttcctgcacg gcggcaaaac
     1321 cttcttcgtc gttttcttcg acggtcattt caatcagcat gcggttgtct tcgatgcccg
     1381 aagcgatgtt gtcgagcgtc aacacgatgc cttcgaggat tttgcgctct ttgccgattt
     1441 cttgggcgcg tttcgggtcg ttccaaagtt cggggtcttc ggaaagaccg acaacttctt
     1501 ccaatcggtc tttcttaccc tgataatcca tataaactcg gatgtcttcg ctgcgctttt
     1561 ccaaatcatt cagggtattg ttgagctggt tgattacttc ggcttccatg attcttttgt
     1621 tctttcaaaa ttttaggggc gtattgtacg ggattcgggt atttttttct atggataaag
     1681 ccttctggaa acacgttcgg acggcatagc gtcaataacg gtatgccgcc agtttgcgtt
     1741 tgatttcagg caatgcggca cgtgctgcct cctcacccaa ccggatggcg cgttttttct
     1801 gatcgaatcc gccgactgca cccaaatcca aaacctgcgg tttgataacc acatccgcct
     1861 gccccaactc attttgcaac gcggaaacgc tcattacgtt cagcgtctga tcgagataag
     1921 agaagaagcc ttggctgatg tttttgcccg gacgggcgga aatatcgacg gcaatcacga
     1981 aattcgcccc ctgccgccgg gcggcactga cgggcacggg ctgcgacaga ccgccgtcaa
     2041 catatgtatg cctgccgatg ataacgggtt ggaacacatt gggaatggcg gcggaagcgc
     2101 gcacagcctg cccggcattc ccttgattga aagcgacggc cttgccggtt tcaaaatcag
     2161 tagcaacagc ggcaaatttg atgggaaact gctgaatctg cctgccgccg acttttcggt
     2221 tgatgtaatt ttgcagcttt tcgcctttga taaaaccact ggtggacaag gttaaatcga
     2281 ctaaatcggt tttgcctaaa atttcggctt ccaattcgag gcggtcgggc gacatacccg
     2341 atgcaaaaag gctgccgact atcgaacctg ccgatgtgcc ggtaaccacc ttcacaggaa
     2401 taccgttttc tttcaaaacc ttaataatac ctacatgggc aaatccttta gatgcgccgc
     2461 caccgagtgc caaaccgacc actgcggcgg gtttggcggt ttgcaccggc ttgcgggcag
     2521 cattatttcc cgccgtgccg caggcggcaa gcaacgcggc ggcggcgatt gccaaaagcg
     2581 gtctgatttt tgaaaacgtt accatatttt ccattccttt atatatcgca ccccgtcaaa
     2641 aagagggatt gcttttctta acaaccccct ttgacagcca agcaaatggg ggctttgtta
     2701 agtcatcatc aaaattaata tttctttttt tcctttacgg aaattatatt tgaaggcata
     2761 ctatccaagg cgggaattat ctcacaacac cgccgttatc caaatatccc gcctttttcc
     2821 tttcctttcc atcaaaatac tttcttttta tattcattaa cttgttaaat cattggctgc
     2881 cgggtgtcag tttttccgac aaaatccgtc taatggggta tcaacagaac caaaacagga
     2941 acacttatga aaatcggaac aacttggcag acggcatccg ctatgctggt tttgcgtctg
     3001 tttgccgcat atgaattttt ggaatcgggt ttgcaaaaat ggaacgggga gaattggttt
     3061 tccgaaatca acgatcagtt tccattcccg ttcaacttgc tgccggacgc gttaaactgg
     3121 aatctcgcca tgtatgcgga gcttttactg cccgtactgt tgcttttggg tttggcaacg
     3181 cgtctgtcgg cattagggct gatggtcgtt accgccgtcg cttgggctgc ggttcacgcc
     3241 ggttcgggtt acaatgtctg cgacaacggt tataaaatgg ctttaattta tatcgtggta
     3301 ttaatcccgc tgcttttcca gggtgcgggc ggatggtcgc tggatacgct gctgaaaaaa
     3361 cggttttgcc cccaatgccg tctgaagcaa gattgattca gtcgtggaat ctgactttaa
     3421 acattccaac cttatctcgt taacttgata ttctgaaaag gaaatagaaa tgaacaaaaa
     3481 cattgctgcc gcactcgccg gtgctttatc cctgtctttg gccgccggtg cagttgctgc
     3541 caacaaaccg gcaagcaacg caacaggcgt tcataaatcc gcccatggct cttgcggcgc
     3601 gtccaaatct gccgaaggtt cgtgcggcgc ggctggttct aaagcaggcg aaggcaaatg
     3661 cggcgagggc aaatgcggtg cgaccgtaaa aaaaacccac aaacacacca aagcatctaa
     3721 agccaaggcc aaatctgccg aaggcaaatg cggcgaaggc aaatgcggtt ctaaataatc
     3781 cccccccttc aaaccaagcc gcgtttttca gtaaaatgcg gcttttttaa cggcaaacaa
     3841 agatttttta acaagcacat cattcttttg tgccatccga accgggtaaa aatatgattc
     3901 aacacgcagg cttaggctac cgccgcgact tggcggaaga ctttctctcg ctttccgaaa
     3961 acagcccgat atgctttatc gaagccgcac cggaaaactg gctgaaaatg ggcggctggg
     4021 cgcgcaaaca gtttgaccgt gtggcggaac ggctgccgct ggcgttgcac ggattgtcta
     4081 tgtcgctggg cgggcaagca ccgctggata ctgatttgat agacggcatc aaagaaatga
     4141 tgcgccgtta cgattgcacg tttttctccg accatttgag ctactgccac gacggcggtc
     4201 atctttacga tttgttgccg ctgcccttca ccgaggaaat ggtgcatcat acggcgcggc
     4261 gtatccgtga agtgcaagac cgtttgggct gccgcatcgc cgtggaaaac acgtcctact
     4321 atctgcattc cccgcttgcc gagatgaacg aggtcgagtt cctcaacgcc gtcgcacgtg
     4381 aggccgattg cggcattcat ctggatgtga acaatatcta cgtcaacgcc gtcaatcacg
     4441 gcctgttgtc gccggaggct tttttgaaaa acgttgacgc agatcgcgtg tgctatatcc
     4501 atattgccgg acatgacgtg gaaacgccgg aattgttgat tgatacacat ggcgcggcag
     4561 ttttgccgac tgtttgggac ttgctcgaac ttgcctatgc caagctgccg acgattccgc
     4621 ccaccctgtt ggaacgcgat tttaatttcc cgccttttgc cgaactcgaa gccgaagtcg
     4681 ccaaaatcgc cgattatcaa acgcgtgccg gaaaggaata ccgccgtgca gcctgaaacc
     4741 tccgcccaat accagcaccg tttcgcccaa gccatacgcg ggggcgaagc cgcagacggt
     4801 ctgccgcaag accgactgaa cgtctatatc cgcctgatac gcaacaatat ccacagcttt
     4861 atcgaccgct gctataccga aacgcggcaa tactttgaca gcgaagaatg gagccgtctg
     4921 aaagaaggtt tcgtccgcga cgcgcacgcc caaacgccct attttcaaga aatccccggc
     4981 gagttcctac aatattgcca aagcctgccg ctttcagacg gcattttggc actgatggat
     5041 tttgaatata cccaattgct ggcagaagtt gctcaaattc cggatattcc cgacattcat
     5101 tattcaaatg acagcaaata cacaccctcc cctgcggcct ttatccggca atatcgatat
     5161 gatgttaccg atgatttgca tgaagcggaa acagccttgt taatatggcg aaacgccgaa
     5221 gatgatgtga tgtaccaaac attggacggc ttcgatatga tgctgctaga aataatgggt
     5281 tcctccgcgc tttcgtttga caccctcgcc caaacccttg tcgaatttat gcctgaggac
     5341 gataattgga aaaatatttt gcttgggaaa tggtcaggct ggactgaaca aaggattatc
     5401 atcccctcct tgtccgccat atccgaaaat atggaaggca attccccggg ccaaaaccat
     5461 ctatccacat aaaattacct tgttcccgat actatgccgc tacccgacct gaccgatgcc
     5521 gaattaatag agtcgcgtaa actgcttctg cattttgcgc ggcttcagtt gcccgaccac
     5581 cctgatttgg ctgaagattt agtgcaggaa acattgctgt ccgcatacag cgcaggcgac
     5641 agttttcaag gcagggcact tgtcaacagc tggctttttg ccatattgaa aaacaaaatt
     5701 attgacgcat tacgtcaaat cggaaggcag aggaaagtct ttaccacact ggatgacgag
     5761 ctactggatg aagcatttga aagccatttt tcccaaaacg ggcattggac gccggaaggg
     5821 cagccgcaac attggaacac tccggaaaaa tcattaaaca acaacgaatt ccaaaaaatt
     5881 ctgcaaagct gcctatacaa cttgcctgaa aacaccgcac gggtatttac cctgaaggaa
     5941 atactcggtt tttcatccga cgaaatacaa caaatgtgcg gtatcagcac gtccaactac
     6001 cacaccatta tgcaccgcgc ccgagaatca ttgcgccaat gcctgcaaat caaatggttc
     6061 aaccaagaaa acccgaagta aacgttatga aaaaatgccg cgatatcgcc ctgcttcttt
     6121 ccaaacatca ggaccgggaa accaccccgg gcgagaagat ttccatatac acacacctgc
     6181 tgttctgccc acattgccga gaatataaaa gacagcttca aaccatcaaa atatcactgg
     6241 caaaaacaac cagaacttca aaataaatgc cgtctgaaaa ggcttcagac ggcataagct
     6301 gacggaaaaa aatcaaaccg atttactgtt atcggcagtt catccataat acacgcttca
     6361 aaagcagcat attcctccat acggaatata taaatacgca aaacacgaag gctgcatcaa
     6421 tttgctttat ttgccttatt tcacagacgg cgctacccct cccgcccaac ccgttctttc
     6481 tgaatgagca gatttcaatg attaaggaaa ccctaatgcg cccaatcttc ctatctttcg
     6541 ttttactccc tattttgata accgcctgca gcacaccgga caagtctgcc cgatgggaaa
     6601 atatcggcac aatctcaaac ggcaatattc atacatatat caataaagac agcgtgagaa
     6661 aaaacggaaa tctgatgatt ttccaagata aaaaagttgt taccaatcta aaacaagaac
     6721 gttttgccaa cacccccgca tacaagactg ccattgccga gtgggaaatc cactgcaaca
     6781 acaaaacata ccgcttaagt tcgctacagt tgtttgatac aaaaaacacg gaaatttcca
     6841 cacaaaacta cacagcctct tccctccgcc cgatgagcat cctgtccggg acattaaccg
     6901 aaaaacaata tgaaaccgta tgcggaaaaa aactctgatt gcaacttata cacaaactta
     6961 cccacaaacc ttatcataaa aatgccgtct gaaatactga aatatcagca tttcggacgg
     7021 cattttgcca tttctccgaa aagttatcct cgaagttatc cacattattt ttttaaacca
     7081 gcttccatcc gaaatataaa cctgctatac aatttcatta tcaaaacgta aattgttcca
     7141 ttgatacaca aaactgctta cccccataat tttgataaag catttcttac attcccggct
     7201 ccgtcccgta atcaacac
//
LOCUS       DAWKOX010000102         7197 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.102, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000102 DAWKOX010000000
VERSION     DAWKOX010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7197)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7197)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7197
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.102"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(80..187)
                     /locus_tag="WJK78_001417"
                     /pseudo
     CDS             complement(80..187)
                     /locus_tag="WJK78_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            197..499
                     /locus_tag="WJK78_001418"
     CDS             197..499
                     /locus_tag="WJK78_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598339.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            783..1031
                     /locus_tag="WJK78_001419"
     CDS             783..1031
                     /locus_tag="WJK78_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ7598340.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTDL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGDFGEFCKGLIL"
     gene            1092..2834
                     /gene="hrpB"
                     /locus_tag="WJK78_001420"
     CDS             1092..2834
                     /gene="hrpB"
                     /locus_tag="WJK78_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ7598341.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHK
                     TDLTDATGTETASGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRFHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGGTIPGTSRMKIITAGLDAAAPFILGKQQF
                     FYATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNH
                     QFYLGADYGRVSGESAQYVSGKQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQ
                     TTNTVYGFNLNYSF"
     gene            2943..>7197
                     /gene="hrpA"
                     /locus_tag="WJK78_001421"
     CDS             2943..>7197
                     /gene="hrpA"
                     /locus_tag="WJK78_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion exoprotein HrpA"
                     /protein_id="HEZ7598342.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSVSMVLPAHAQIITDKTAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDNKGAVLNNDRNNNPFLVKGGAQLILNEVRGTASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGGADYTEILARAVALQGKLQGKNLAVSTGPQKVDYASGEISAGTAAGTKPTI
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADS
                     TEASPTYLSIETTETGAAGAFISNGGRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPA
                     ATVLNAGRNLVIESKANVNNAKGSTNLSTGGRTVIKEASIQTGTTVYSSSKGNAELGN
                     NTRITGADVTVLSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGT
                     SKTLTASKDMGVEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSAKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNYSKNELNETKL
                     PVRVVAQTAATRSGWDTVLEGTEFKTTLAGADIQAGVGEKARVDAKIILKGIVNRIQS
                     EEKLETNSTVWQKQAGRGSTIETLKLPSFESPTPPKLSAPGGYIVDIPKGNLKTEIEK
                     LSKQPEYAYLKQLQVAKNINWNQVQLAYDRWDYKQEGLTE"
BASE COUNT         2131 a         1740 c         1651 g         1675 t
ORIGIN      
        1 tttgtaaaag caaggatagg gcatctgccc ttttgattgt ttgattaacg atacaaggag
       61 tttcaaaatg agagttttat agtggattaa atttaaacca gtacagcgtt gcctcgcctt
      121 gccgtaccat ttgtactgtc tgcggcttcg tcgccttgtc ctgatttaaa tttaatccac
      181 tatatgtgtt catgaaatga cttgggtcgg aggctcaggt aatgcgcaac aaagttcata
      241 ttattgcgaa atttgcgaat ctgcagggct taacgatacg ggaaatcctg ataaatcttt
      301 aggattgcca aacaatacgt tcagtaatcc gcctggttgg ggagctacaa tcggagcttt
      361 agcaggtagc cgcataggga tgcctgaatt tggtacgttt gcgagccatg ccattgaaaa
      421 tttcgactgg tcatggtatc gacgttatag ggaaattgcc gaaacgattg aacgagaata
      481 ttcaggcggt ttgccttaat agttgaggag gtcatgatgt ttgccaaaca ttatcaattc
      541 atcgcactcg gcatcatgct gcttctttat atgttgattc tctatacgac cgatttttcc
      601 aatctgacgt attggatgct gttttttatc tgttttatta caggaaaaat attagctcgt
      661 ttgttagaga aaagctttaa ataaaatagc agctagtcgc aaaaggtcgt ctgaaacctt
      721 ttcaggcggc ctttctaaaa tacatccaac ttcctaatcc ctatttttca aaaaggaaat
      781 ctatgcccca tctgcaaaac ctgtctttgg gcttaaagaa aaagctgcct gttatcctgc
      841 aaacagaaat atcagaatgc ggcttggcat gtctggcggc tgtggcggga tttcatggtt
      901 tccatacgga tttacgcgca ctgcgttcaa aatactgtcc gagacctttg caaaattccc
      961 caaaatcccc taaatgtctt ggtgggaatt ttggggattt tggggaattt tgcaaaggtc
     1021 tcattctata actgtaaata cttttaaatt tatgacagaa tagtaaatat tgctaaaata
     1081 atattaatgt catgaaattt tttcctgctc catgtctgtt ggttatcctg gctgtcatac
     1141 cccttaaaac cttagctgcc gatgaaaacg atgcagaact tatccgttcc atgcagcgtc
     1201 agcagcacat agatgctgaa ttgttaactg atgcaaatgt ccgtttcgag caaccattgg
     1261 agaagaacaa ttatgtcctg agtgaagatg aaacaccgtg tactcgggta aattacatta
     1321 gtttagatga taagacggcg cgcaaatttt cttttcttcc ttctgtgctc atgaaagaaa
     1381 cagcttttaa aactgggatg tgtttaggtt ccaataattt gagcaggcta caaaaagccg
     1441 cgcaacagat actgattgtg cgtggctacc tcacttccca agctattatc caaccacaga
     1501 atatggattc gggaattctg aaattacggg tatcagcagg cgaaataggg gatatccgct
     1561 atgaagaaaa acgggatggg aagtctgccg agggcagtat tagtgcattc aataacaaat
     1621 ttcccttata taggaacaaa attctcaatc ttcgcgatgt agagcagggc ttggaaaacc
     1681 tgcgtcgttt gtcgagtgtt aaaacagata ttcagattat accgtccgaa gaagaaggca
     1741 aaagcgattt acagatcaaa tggcagcaga ataaacccat acggttcagt atcggtatag
     1801 atgatgcggg cggcaaaacg accggcaaat atcaaggaaa tgtcgcttta tcgttcgata
     1861 accctttggg cttaagcgat ttgttttatg tttcatatgg acgcggtttg gcgcacaaaa
     1921 cggacttgac tgatgccacc ggtacggaaa ctgcaagcgg atccagaagt tacagcgtgc
     1981 attattcggt gcccgtaaaa aaatggctgt tttcttttaa tcacaatgga catcgttacc
     2041 acgaagcaac cgaaggctat tccgtcaatt acgattacaa cggcaaacaa tatcagagca
     2101 gcctggccgc cgagcgcatg ctttggcgta acaggtttca taaaacttca gtcggaatga
     2161 aattatggac acgccaaacc tataaataca tcgacgatgc cgaaatcgaa gtgcaacgcc
     2221 gccgctctgc aggctgggaa gccgaattgc gccaccgtgc ttacctcaac cgctggcaac
     2281 tggacggcaa gttatcttac aaacggggta ccggtatgcg ccaaagtatg cccgcacctg
     2341 aagaaaacgg cggcggtact attccaggca catcccgtat gaaaatcatt actgccggtt
     2401 tggacgcagc cgccccattt attttaggca aacagcagtt tttctacgca accgccattc
     2461 aagctcaatg gaacaaaacg ccgttggttg cccaagataa attgtcaatc ggcagccgct
     2521 acaccgttcg cggatttgat ggggagcaga gtcttttcgg agagcgaggt ttctactggc
     2581 agaatacttt aacttggtat tttcatccga accatcagtt ctatctcggt gcggactatg
     2641 gccgcgtatc tggcgaaagt gcacaatatg tatcgggcaa gcagctgatg ggtgcagtgg
     2701 tcggcttcag aggagggcat aaagtaggcg gtatgtttgc ttatgatctg tttgccggca
     2761 agccgcttca taaacccaaa ggctttcaga cgaccaacac cgtttacggc ttcaacttga
     2821 attacagttt ctaacctctg aattttttac tgatatttag acggtctttc cttatcctca
     2881 gaccgtcaaa ctttacctac gtacttggcg cgcagtacgt tcatcttcaa aatggaatag
     2941 acatgaataa aggtttacat cgcattatct ttagtaaaaa gcacagcacc atggttgcag
     3001 tagccgaaac tgccaacagc cagggcaaag gtaaacaggc aggcagttcg gtttctgttt
     3061 cactgaaaac ttcaggcgac ctttgcggca aactcaaaac cacccttaaa accttggtct
     3121 gctctttggt ttccgtcagt atggtattgc ctgcccacgc acaaatcatt accgataaaa
     3181 ccgcgcccaa aaaccagcag gtcgttatcc ttaaaaccaa cactggtgcc cccttggtga
     3241 atatccaaac tccgaatgga cgcggattga gccacaaccg ctatacgcag tttgatgttg
     3301 acaacaaagg ggcagtgtta aacaacgacc gtaacaataa tccgtttctg gtcaaaggcg
     3361 gtgcgcaatt gattttgaac gaggtacgcg gtacggctag caaactcaac ggcatcgtta
     3421 ccgtaggcgg ccaaaaggcc gacgtgatta ttgccaaccc caacggcatt accgttaatg
     3481 gcggcggctt taaaaatgtc ggtcggggca tcttaactac cggtgcgccc caaatcggca
     3541 aagacggtgc actgacagga tttgatgtgc gtcaaggcac attgaccgta ggagcagcag
     3601 gttggaatga taaaggcgga gccgactaca ccgagatact tgctcgtgca gttgctttgc
     3661 aggggaaatt acagggtaaa aacctggcgg tttctaccgg tcctcagaaa gtagattacg
     3721 ccagcggcga aatcagtgca ggtacggcag cgggtacgaa accgactatt gcccttgata
     3781 ctgccgcact gggcggtatg tacgccgaca gcatcacact gattgccaat gaaaaaggcg
     3841 taggcgtcaa aaatgccggc acactcgaag cggccaagca attgattgtg acttcgtcag
     3901 gccgcattga aaacagcggc cgcatcgcca ccactgccga cagcaccgaa gcatcaccga
     3961 cttatctctc catcgaaacc accgaaacag gcgcagcagg cgcatttatc tccaatggcg
     4021 gccggataga gagcaaaggc ttattggtta ttgataccgg ggaggacatc ggtttgcgta
     4081 acggagcggt cgttcaaaac aacggcaacc gccctgctgc tacggtatta aatgccggcc
     4141 gtaatttggt tatcgaaagc aaagcaaatg tgaacaatgc taaaggttcg accaatctgt
     4201 cgaccggcgg ccgtaccgtc atcaaggagg ccagtattca gactggcact accgtataca
     4261 gttccagcaa aggcaacgcc gaattaggca ataacacacg cattaccggg gcagatgtta
     4321 ccgtattatc caacggcacc atcagcagtt ccgccgtaat agatgccaaa gacaccgcac
     4381 acatcgaagc aggcaaaccg ctttctttgg aagcttcaac agttacctcc gatatccgct
     4441 taaacggagg cagtatcaag ggcggcaagc agcttgcttt actggcagac gataacatta
     4501 ctgccaaaac taccaatctg aatactcccg gcaatctgta tgttcataca ggtaaagatc
     4561 tgaatttgaa tgttgataaa gatttgtctg ccgccagcat ccatttgaaa tcggataacg
     4621 ctgcccatat taccggcacc agtaaaaccc tcactgcctc aaaagacatg ggtgtggagg
     4681 caggctcgct gaatgttacc aataccaatc tgcgtaccaa ctcgggtaat ctgcacattc
     4741 aggcagccaa aggcaatatt cagcttcgca ataccaagct gaacgcagcc aaggctctcg
     4801 aaaccaccgc attgcagggc aatatcgttt cagacggcct tcatgctgtt tctgcagacg
     4861 gtcatgtatc cttattggcc aacggtaatg ccgactttac cggtcacaat accctgacag
     4921 ccaaggccga tgtcaatgca ggatcggttg gtaaaggccg tctgaaagca gacaatacca
     4981 atatcacttc atcttcagga gatattacgt tggttgccgg caacggtatt cagcttggtg
     5041 acggaaaaca acgcaattca atcaacggaa aacacatcag catcaaaaac aacggtggta
     5101 atgccgactt aaaaaacctt aacgtccatg ccaaaagcgg ggcattgaac attcattccg
     5161 accgggcatt gagcatagaa aataccaagc tggagtctac ccataatacg catcttaatg
     5221 cacaacacga gcgggtaacg ctcaaccaag tagatgccta cgcacaccgt catctaagca
     5281 ttaccggcag ccagatttgg caaaacgaca aactgccttc tgccaacaag ctggtggcta
     5341 acggtgtatt ggcactcaat gcgcgctatt cccaaattgc cgacaacacc acgctgagag
     5401 cgggtgcaat caaccttact gccggtaccg ccctagtcaa gcgcggcaac atcaattgga
     5461 gtaccgtttc gaccaaaact ttggaagata atgccgaatt aaaaccattg gccggacggc
     5521 tgaatattga agcaggtagc ggcacattaa ccatcgaacc tgccaaccgc atcagtgcgc
     5581 ataccgacct gagcatcaaa acaggcggaa aattgctgtt gtctgcaaaa ggaggaaatg
     5641 caggtgcgcc tagtgctcaa gtttcctcat tggaagcaaa aggcaatatc cgtctggtta
     5701 caggagaaac agatttaaga ggttctaaaa ttacagccgg taaaaacttg gttgtcgcca
     5761 ccaccaaagg caagttgaat atcgaagccg taaacaactc attcagcaat tattttccta
     5821 cacaaaaagc ggctgaactc aaccaaaaat ccaaagaatt ggaacagcag attgcgcagt
     5881 tgaaaaaaag ctcgcctaaa agcaagctga ttccaaccct gcaagaagaa cgcgaccgtc
     5941 tcgctttcta tattcaagcc atcaacaagg aagttaaagg taaaaaaccc aaaggcaaag
     6001 aatacctgca agccaagctt tctgcacaaa atattgactt gatttccgca caaggcatcg
     6061 aaatcagcgg ttccgatatt accgcttcca aaaaactgaa ccttcacgcc gcaggcgtat
     6121 tgccaaaggc agcagattca gaggcggctg ctattctgat tgacggcata accgaccaat
     6181 atgaaattgg caagcccacc tacaagagtc actacgacaa agctgctctg aacaagcctt
     6241 cacgtttgac cggacgtacg ggggtaagta ttcatgcagc tgcggcactc gatgatgcac
     6301 gtattattat cggtgcatcc gaaatcaaag ctccctcagg cagcatagac atcaaagccc
     6361 atagtgatat tgtactggag gctggacaaa acgatgccta taccttctta aaaaccaaag
     6421 gtaaaagcgg caaaatcatc agaaaaacca agtttaccag cacccgcgac cacctgatta
     6481 tgccagcccc cgtcgagctg accgccaacg gtatcacgct tcaggcaggc ggcaacatcg
     6541 aagctaatac cacccgcttc aatgcccctg caggtaaagt taccctggtt gcgggtgaag
     6601 agctgcaact gctggcagaa gaaggcatcc acaagcacga gttggatgtc caaaaaagcc
     6661 gccgctttat cggcatcaag gtaggtaaga gcaattacag taaaaacgaa ctgaacgaaa
     6721 ccaaattgcc tgtccgcgtc gtcgcccaaa ctgcagccac ccgttcaggc tgggataccg
     6781 tgctcgaagg taccgaattc aaaaccacgc tggccggtgc cgacattcag gcaggtgtag
     6841 gcgaaaaagc ccgtgtcgat gcgaaaatta tcctcaaagg cattgtgaac cgtatccagt
     6901 cggaagaaaa attagaaacc aactcaaccg tatggcagaa acaggccgga cgcggcagca
     6961 ctatcgaaac gctaaaactg cccagcttcg aaagccctac tccgcccaaa ttgtccgcac
     7021 ccggcggcta tatcgtcgac attccgaaag gcaatctgaa aaccgaaatc gaaaagctgt
     7081 ccaaacagcc cgagtatgcc tatctgaaac agctccaagt agcgaaaaac atcaactgga
     7141 atcaggtgca gcttgcttac gacagatggg actacaaaca ggagggctta accgaag
//
LOCUS       DAWKOX010000103         7192 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.103, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000103 DAWKOX010000000
VERSION     DAWKOX010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7192)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7192)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7192
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.103"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(16..771)
                     /locus_tag="WJK78_001422"
     CDS             complement(16..771)
                     /locus_tag="WJK78_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ7598343.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(951..2110)
                     /gene="nirK"
                     /locus_tag="WJK78_001423"
                     /pseudo
     CDS             complement(951..2110)
                     /gene="nirK"
                     /locus_tag="WJK78_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
     gene            2490..4745
                     /locus_tag="WJK78_001424"
     CDS             2490..4745
                     /locus_tag="WJK78_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ7598344.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPDETFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDLKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPELNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTISAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLVFIGGAICVAI
                     QATKIVFGRDK"
     gene            4924..5457
                     /locus_tag="WJK78_001425"
     CDS             4924..5457
                     /locus_tag="WJK78_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEZ7598345.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5520..6704)
                     /locus_tag="WJK78_001426"
     CDS             complement(5520..6704)
                     /locus_tag="WJK78_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ7598346.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGTRMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSEFGKLSPSVFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6744..7148)
                     /locus_tag="WJK78_001427"
     CDS             complement(6744..7148)
                     /locus_tag="WJK78_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ7598347.1"
                     /translation="MTAQPCPICTAQDEDILLQTPNLRVIAIHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1608 a         1747 c         2004 g         1833 t
ORIGIN      
        1 ctataattga aggggttatc ggcttgtgca acggaagccc aagttgtgca agacgtattt
       61 ggattgcagg ctggtgcgga tgccgtagcg gaggaaggcg gcatagttgg acgagtcgct
      121 cgacccgata gacgcgccgc tgcaaaacat ttgcgcgttg gcattgccgg aagaaagcag
      181 gctgctgttg aaatcttccg tccattccca aatcagcccg tgcatatcat aaacgcccca
      241 gtagttcggg cggcctttgc cgacatcgtg caggcctttc cgtccgccgt cggcatacca
      301 atcgagaata gtgcggttgt agccgggttc gtttgagccg tttttctgcg tggcggaagc
      361 aagtccggca aattcccatt cgtcaatggt cggcaggcgt ttgccttgtg cggcgcaata
      421 ggcgttggcg gcaaaccagg aaacattggt taccggttgt tttaattcgc ccgccttcgg
      481 cgcatagctg cggctgccgt ttttcatcca atgcttcagg taagcgggtt ctgcctgttt
      541 ggaaccgatc ctgccttttt gccattgggg gtggctgttg acaaattcgg caaactcggc
      601 attggtaacg ggatatttat ccagtttgaa cggtttgact ttaatcaggc cggtatcttt
      661 tttcagataa agcgggcggt agctgccgcc ttcgatttga accatttcgg cagccgccgc
      721 ttgagtgccg gcgagtgccg cacagagaaa gagtaaccgg gcaaacttca tatcatgcct
      781 cctgacaggc agttaaaatt gatttttcag acggcatttt aaacaaaaag ccgcgaatgc
      841 cgtctgaaga atcaatcttc cgaaaggaaa gattggttgt taaaaaacca ctgccgtgcg
      901 taattaagta cggcggcagt ggttcgtttg cctaaaaatg ggtgttcaat ttagtaatcg
      961 ctttttgcag gagcagaggc tgcaggagca gaagctgcgg gagcggaagc agcaggagct
     1021 gcaccgttac cggcgtaagc ggtatcactc aatttttgag tcatgatttc agggttttct
     1081 gcaccttcta ctttcaattg acccagtgcg cctttgttga atgcgcggaa gatagagtgg
     1141 tcaaccaaag tgtagctgcc cgggatgtcg actttgaatt cgacgatggc agagccgccg
     1201 gcaggaacga tggtactttg tacgttttcg ttaatcagtt tgccgccttc aacataaact
     1261 ttgtcgaaga tttcaccgat tacgtggaag gaagacacca agttcgggcc gccgttacca
     1321 acgtacatac gtacagtttc gcctgctttg gctttcaggg cgttgtcgcc ggcgatagca
     1381 cctacgtgac cgttgaatac gacgtattca ggctgttcgg caacagcttt gtccatatcg
     1441 aacggttgca ggccttgcgc accttttttg cctttggtgt agaagtcgcc ttggacgatg
     1501 tagaactctt tatccacttt cggcaggcct tctttaggct cgaccaaaat caggccgtac
     1561 ataccgttgg cgatgtgcat accgaccggc gcgacggcgc agtggtagat gtacagaccc
     1621 ggttgcaggg ctttgaagct gaatgtggaa gtgcggcccg ggcggtaaag gtcgcggctg
     1681 caccgccgcc ctgaccggtt gcggcgtgga agtcgacgtt gtgcggaacg gtagaagaag
     1741 gattgttgga aaattccact tcaaccgtat cgccttcgcg tacgcggatc atgcgacccg
     1801 gaacgtcgcc gtcaaatgtc cagtagcggt attccacacc gtcttccatg gtcatggttt
     1861 tttcgacggt ttccattttc acgcgtactt tggcagggta gtcgcggtcg attgcaggag
     1921 gtacttctgg agcgtgtgtg gtaaccgcat cgataacggg cagttcgcct gtcggcgttt
     1981 cggcggcggt ttgtgcggcg gaacttgcgg cttctgcgga agcggcaggg gcttgcgcgg
     2041 caggttcgcc gccgcaggcg gctaatgcga ataaggaagc aatcattgca gctaaggctt
     2101 ggcgtttcat aatattttcc ttttgtaaga aaagtagagg gattggttaa gaacttggtg
     2161 tgattatgcg tttgccccat tgggggcatt ttgatttaag tcaaataatt cataaaatat
     2221 gaacttaaaa tgatacttct aatactttat agctactaaa aattacaata aataggctga
     2281 tttgcttaag gacttcggca aatcaggcaa aggcagggta gttgccgact aaagaataat
     2341 gatagttatt atcatatatg tatttgtttt atatgtgagt ttctttaaac aaatgtttat
     2401 ttgcgcggta aaccgtgata caatctttaa cattcatatt tgatgaatta atacccaacc
     2461 acttttacca aaattaagga gtacttaaaa tgggacagta caagaagctg tggtacttgc
     2521 tgtttgccgt tctggcggta tgctttacca ttcttggcta tatgggcagc gaggtttata
     2581 agaaagcccc gccttacccc gaacaggtcg tttccgcatc aggcaaagtg ctgatgacga
     2641 aagacgatat tttggcaggt cagtctgcgt ggcagagtac cggcggtatg gaagtcggtt
     2701 cgattctggg tcacggcgca tatcaggctc cggactggac ggccgactgg ctgcatcgtg
     2761 agttgtccgc ctggttggat ttgaccgcgc aacagactta cggcaaaaaa ttcgatgaag
     2821 tttcccctga agaacaagcc gttctgaaaa cccgactggc tgacgaatac cgcaaccaaa
     2881 gccgtattaa agaagacggc agcgtcgtca tcagcgatac gcgcgtgaaa gccatcgaaa
     2941 gcatcctgcc ttattaccac ggtgtttacg gcgatgatcc cgcgctgcaa accacccgcg
     3001 aacactttgc aatgaaaaac aacacattgc caagccaaga agcgcgtgaa aaactgttcg
     3061 acttcttctt ctggacttct tggtctgctt cgaccaaccg tcctgacgag acgttcactt
     3121 ataccaacaa ctggccgcac gagcctttga tcaacaacgt accgaccact gaaaactata
     3181 tgtggtcatt caccagcgtt gttcttctgc tgatgggcat cggtttgctg atgtggggtt
     3241 attccttctt gaccaaacac gaggaagtgg aagtgccgtc tgaagacccg atttccaaaa
     3301 tccaactgac cccttcgcaa aaagcattgg gcaaatacgt cttcctgacg gtcgccctgt
     3361 ttgtggtaca agtattgctg ggcggactga ccgcgcacta caccgtcgaa ggccagggtt
     3421 tctacggcat tgacgaggcg ttgggctttg aaatgtccga ctggttcccc tacgccctga
     3481 cccgtacttg gcacatccaa tccgccatct tctggattgc aaccggcttt ttgacggcag
     3541 gtttgttcct cgcgccgatt gtcaacggcg gcaaagatct caagttccaa cgtgcaggcg
     3601 tgaacttcct ctatatcgcc ctcttcatcg tggtcggcgg ttcttacgcg ggcaacttct
     3661 tcgcgttgac gcacatcctt ccccccgaat tgaatttctg gttcggacac caaggttacg
     3721 aatacctcga tttgggccgt ttctggcaac tcctgctgat ggtcggtctg ctgttgtggc
     3781 tgttcctgat gctgcgttgc accatctccg cctttaaaga aaaaggcgtg gacaaaaacc
     3841 tgctggcaat ctttgtcgct tctatggtcg gtgtgggcgt attctacgca ccgggcctgt
     3901 tctatggcga aaaatccccg attgccgtaa tggaatactg gcgttggtgg gtggttcacc
     3961 tgtgggtgga aggcttcttt gaagtatttg ccactgccgc ttttgccttt gtcttctaca
     4021 atatgggctt tgtccgccgc agtaccgcta ctgcctccac tttggccgct gccgccatct
     4081 ttatgttggg cggcgttccg ggtacgctgc accacctgta cttctccggc tctacctccg
     4141 cctctatggc aatcggtgcc tgcttctccg ctttggaagt cgtgccgctg gtgttgctgg
     4201 gccgtgaagc atacgagcat tggtcttacc aacacttgtc cgactgggcg aaacgcctgc
     4261 gttggccgct gatgtgcttc gttgcagtcg ccttctggaa tatgatcggt gccggcgtat
     4321 tcggcttcct gatcaatccg ccgatttccc tgttctatat ccaaggtttg aacacttccg
     4381 ccgttcacgc gcacgccgcc ttgtttggtg tgtacggttt cttggcattg ggcttcgtat
     4441 tgctggttgc ccgttatttg aaaccgaacg cgcagtttga cgacaaattg atgacttggg
     4501 gtttctggct gctcaacggc ggcttggtcg gtatgattgc catcagcctg ctgcctgtcg
     4561 gcgcgattca ggcatacgcc tccatcacgc acggtctgtg gtatgcccgc agcgaagagt
     4621 tcctgcaaat ggaaatcctc gataccttgc gttgggtacg tacggcagct gacttggtct
     4681 ttatcggcgg tgcaatctgc gttgccatcc aagctactaa aatcgtattc ggccgcgaca
     4741 aataagtttt gcggtatgaa atgagcaact gcacccgttt tcgggtgcag ttttttattg
     4801 cggattggga cgggaatgga aaaggatgtg gattttttat tttaatcggc tatacaattg
     4861 ctgctttcat gccgtctgaa gcacgtttca gatggcatcg gtttacatca gataaggata
     4921 aaaatgggta tttacgattt tcaaatgaaa gatgcggaag gcaatgcggt tgatttgtca
     4981 ggctatcgcg gcaaggttct gctgattgtc aacacggcaa cgcgttgcgg tctgaccccg
     5041 caatacgagg ctttgcagaa gctgtatgca caatataccg cagaaggctt ggagattttg
     5101 gattttccgt gcaaccagtt ccgcgaacag gctcccgaaa gcagcggaga aattgcccaa
     5161 gtgtgtatga tgaagtttgg cacgaagttt aagattttcg acaaaatcga agtcaatgga
     5221 gcaaataccg cgcccttgta tgcctacctg aaatccgtca aaccgcaaga taaaggcaat
     5281 catctgttta aagatttcgt gttgaagctc gcagctttgg gagagaagcg cgacgaaggc
     5341 gacatcaaat ggaactttac caaattcctc gtcaaccgcg acggcgaagt ggtcgagcgt
     5401 tttgcgccta gtgttacgcc cgaagaaatc gaagccgata ttcgggcatt gctgtaatct
     5461 gccgccgtct tgggaaatgc cgtctgaagg cttcagacgg catttgtccg tttgcgggtt
     5521 tattccgaaa tatcggcaac accgctttcg gggaagatgg gcaaatccgg cggtgggagc
     5581 agggtatcca aagtcagggc ggacgcatcg agtgtcgggt agccttcaaa cgcgaccgaa
     5641 taaccgctgt ttccgttcat acggattcgg gcgtgcgcgc ctagagggaa agtgattttg
     5701 tcggcaatgt gtccgaacgg gaagcccgtc agcacgggga ttttcgccgt gcgcgaaaca
     5761 tggttggcaa cggcagaaaa atcataagac ggatcataga catctcgaat tttttccata
     5821 cggaaattgc cgaacacgat ggcgcgctgt ttcttcaaaa tacccgaaag atacagcgta
     5881 ttgagcatac gttcgatgcg gtagggctgt tcgccgacat cttcgaggaa caaaatgccg
     5941 ccgtcgatgt cgggcatata aggcgtgccg gcgagcgagg cgaggacgct taagttgccg
     6001 ccccacaata tgccttcggt ttcgacatcg gcgcgttgga tataaggaac atcaacggtc
     6061 aggcggtttt gggttgcccc cttgataaag gcatccattg taaacacgct gggggagagt
     6121 ttgccgaatt cgctataagc catcgggccg gcaaaactca tcatattgcc ttttgccaac
     6181 aatgccagtt ggacggcgca aacatcgctg aatccgaaaa acagcgtgcc gtgttcgcgc
     6241 atccttgtgc cgagcgaagc aaaatcgata tgcggcagaa tccgcgccgc accatagccg
     6301 ccgcgcaagc ccatcagcac tttaggtgtg gcgacgcggc cggaggcgac ctcttggaaa
     6361 tcggcggcac gttgcgcgtc cgtaccggca aaccgttgga aacggcggct gcccgcctgt
     6421 tggttggtta cggtaaaacc ggcattgtaa aggcgggtta aggctgtgtt gacgcggttg
     6481 gtgtcttcgg caaatcctga cgaagcgaca acgcgcagaa ggttgccgtc cgaactttga
     6541 cggcgtggcg tttggagagg cacggttcgg gctttcacaa cggaatggga agagggaagg
     6601 ggcggaacgg atgtggcgga tgtgccgcaa gcctgaagca gccccgcgcc ggcagcggcg
     6661 gtgcaggttt tcagaaaacg gcggcgggag gtcggttcgg tcataatttc cctttcatac
     6721 ggtttcagac ggcattggcg ggcttaaagc agctttttaa gctgttccgt ccaatcttgc
     6781 ggcagggtca taccgtgttt ccggacgggg tttgcccaaa tcggcgcggg gaaagacgca
     6841 tcgttttcaa agcgggcgat aatatgccaa tgcaggtgcg gcacgacatt gcccaagctg
     6901 gcgaggttaa tcttggcagg ttgaaacact tggcgcatag cggcttcgac tttgtacacc
     6961 atttccatca attcgccgcg ttccgctgcc gaaaggtcgg tcatttcggc gatgtgctta
     7021 cgccaaatga cgcggcagaa tgcaggcgaa ccgctgtcgt tatggatggc gatgacgcgg
     7081 aggttggggg tttgcagcaa aatatcttca tcttgtgccg tgcagatggg gcagggttgg
     7141 gcggtcattt ttccttattc ctgaaagtgt ttaaaaaacg gtaggataat tt
//
LOCUS       DAWKOX010000104         7053 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.104, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000104 DAWKOX010000000
VERSION     DAWKOX010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7053)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7053)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7053
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.104"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            140..721
                     /locus_tag="WJK78_001428"
     CDS             140..721
                     /locus_tag="WJK78_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ7598348.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(783..1637)
                     /gene="folD"
                     /locus_tag="WJK78_001429"
     CDS             complement(783..1637)
                     /gene="folD"
                     /locus_tag="WJK78_001429"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ7598349.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            1860..1937
                     /locus_tag="WJK78_001430"
     tRNA            1860..1937
                     /locus_tag="WJK78_001430"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1895..1897,aa:Pro,seq:tgg)
     gene            1962..2038
                     /locus_tag="WJK78_001431"
     tRNA            1962..2038
                     /locus_tag="WJK78_001431"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1996..1998,aa:Arg,seq:tct)
     gene            2066..2141
                     /locus_tag="WJK78_001432"
     tRNA            2066..2141
                     /locus_tag="WJK78_001432"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2099..2101,aa:His,seq:gtg)
     gene            2276..2782
                     /locus_tag="WJK78_001433"
     CDS             2276..2782
                     /locus_tag="WJK78_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEZ7598350.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKGGDRPINPLENRAAVAAALESVDLVTWF
                     DEDTPAALIEAVKPEILVKGGDWAADKIVGAAETLVRGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            2779..4557
                     /locus_tag="WJK78_001434"
     CDS             2779..4557
                     /locus_tag="WJK78_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ7598351.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGEQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            4670..5494
                     /locus_tag="WJK78_001435"
     CDS             4670..5494
                     /locus_tag="WJK78_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ7598352.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAQAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADAEEIRKITSLYGKLNLKSCK"
     gene            complement(6257..7045)
                     /locus_tag="WJK78_001436"
     CDS             complement(6257..7045)
                     /locus_tag="WJK78_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ7598353.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     AGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPYTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
BASE COUNT         1506 a         1826 c         2122 g         1599 t
ORIGIN      
        1 atgtatggcg taaaggaagc gttttaacgc cgtattggga aaatgtaaag ttctttatcg
       61 ggatttcttt aagtattggc gttttcggtg tcgtggcggt agaatcgggg tcagttaaga
      121 acaattatca ggaacggata tggaagaaaa aaacgactac accgacgcgg catccgacaa
      181 ccgcaacggg caggaaattg aagtcggaat tgccggcgca ggcgaccgga tacttgccgc
      241 gctgctgaac caattgttta cctttttggt tttgttggtg ccgtttgccg gactgattgc
      301 tttcgccatc aagaatgaag gcaggattgg cggcagtgag gaaatattcg ggctgctttt
      361 gggcatgact tccttttggg taggactggc gggcattttg gtttataccg tcgttcaaat
      421 ctactatatg agcagggacg ggcagtcatt gggtaagaag atcatgagaa tcagggtgtt
      481 gaaaaccgac ggccgcaatc cgggttttgt cggcacggtt ttggtacgcg aaatcgcatg
      541 gtcggttttg gttgccatta ttgccgccgt tatcggtctt gcagtaggtg acaacggaga
      601 aaacgccatc aacctgctgg cattccttgc caactttgtc ctgctcttta tggtcaaacg
      661 cgaccgccgc acgctttacg acatactggc ggatacggtt gtcgtcaagc tgcccaaata
      721 aacggacacg gcaaaatgcc gtctgaaagc ctttcagacg gcatttttat cttcagaacc
      781 gcttaagcat cgtgcagcga agccgcgtgc aaagtgtttt ccattaatgt ggcaatcgtc
      841 atcggaccca cgccgccggg aacgggcgta atcatcgccg cccgttcttt tgccgtttca
      901 aattccacgt cgccgcacag gctgccatcg tccaaacggt tgatgcccac atcaataacg
      961 accgcgccag gtttgatcca ttcgcctttg acaaagttcg gaatgcctac gccgaccacc
     1021 aaaatatcgg ctccggcaac ctcgtctgtc agattttcgg ttgcgctgtg gcagaccgtt
     1081 accgttgcgc gcgccagcag cagttccaaa gcctgcgggc ggccgacgat attcgacgcg
     1141 ccgaccacga ccgctttttt ccccttcgga tcaatgccgt aagcttccaa aagcgtcatc
     1201 acgcccttgg gcgtacacgg gcgcatcagc ggcattttga ccgccagcct gccgacattg
     1261 taaggatgga agccgtccac gtccttatcc ggcgaaatac gttccaaaac cgcctggctg
     1321 tcgaggtgct tcggcagcgg tagctgaacc agaataccgt ccacttcgga atcggcattc
     1381 aggcggtcga ccagtgccag cagttcttcc tgcgatgttg attcgggcag ctcgtaagac
     1441 agtgatttga tgccgcattt ttggcaggcg gttttcttgt tgcggacata aaccgcgctg
     1501 gcagggtcgc ctccgaccaa aaccacggcc aggcaaggca tgtgcagatt gtcctgttgg
     1561 cgttgcgcca ccgcttcggc aaccgcctgc aggcgttttt gcgaaacttc tttaccattg
     1621 atcagttgtg ccgacatatc cgtccttttg ttaaacaggt agaaaatgct gaaaattatc
     1681 gcattttccg tttgttttta cagcaggatg ccgaaaataa atttgccctg aaataaaata
     1741 cggctgtttg gacggattaa atattttttc aaatcaaaaa actatatttt tcatcttggt
     1801 gtcttgaaaa taaatattga cgcatctttc cctgagttgt atagttcgct tcttcaagtc
     1861 ggggcgtagc gcagcccggt tagcgcatct gctttgggag cagagggtcg tgagttcgaa
     1921 tcccaccgcc ccgaccaatc aatcagcacg aatcggcatg agcgcccgta gctcaaccgg
     1981 atagagcacc gaccttctaa gtcgggggtt acaggttcga ttcctgtcgg gcgtgccaag
     2041 aatttgattg aaaaccgttt ttatggtggc tgtagctcag ttggtagagc cccggattgt
     2101 gattccggtt gtcgtgggtt cgagccccat cagccacccc agataaaggc ccgtactttt
     2161 cggtacgggt cttttcccgt ttgcgcgtac tgtccgcgcc gccggctttg cctttcgcat
     2221 atgcttctgt atcatgtagg ttttctgtct tttatggttt ttgtcggaga ctttgatggt
     2281 tgacgcttgg tctgttcctg attttgaatc gaaaatctgt ccgcccgagg cgttggcggc
     2341 gcgtttggcg ttgttgccgc gcccgctggt gtttaccaac ggctgtttcg acatcctcca
     2401 cagggggcac gttacttatc tggcgcaggc gcgttcggca ggggcggcgt tggtgctggc
     2461 gttgaatacc gatgcttcgg tgcggcgttt gggcaagggc ggcgaccgcc cgattaatcc
     2521 tttggagaac cgtgccgccg ttgccgccgc gttggaaagt gtggatttgg taacgtggtt
     2581 tgacgaggat acgccggcgg cgttgatcga ggcggtcaaa cctgagattt tggtcaaggg
     2641 cggcgattgg gctgcggata agattgtcgg cgcggcggaa acgttggtgc gcggcggtca
     2701 ggtgttttca attccgtttc tgcaccagac ttcgacaacg aagactttgg caaaaatccg
     2761 tgcggcagag ggcggaaaat gacggttttg aagccttcgc actggcgggt gttggcggag
     2821 cttgccgacg gtttgccgca acacgtctcg caactggcgc gtatggcgga tatgaagccg
     2881 cagcagctca acggtttttg gcagcagatg ccggcgcaca tacgcgggct gttgcgccaa
     2941 cacgacggct attggcggct ggtgcgccca ttggcggttt tcgatgccga aggtttgcgc
     3001 gagctggggg aaaggtcggg ttttcagacg gcattgaagc acgagtgcgc gtccagcaac
     3061 gacgagatac tggaattggc gcggattgcg ccggacaagg cgcacaaaac catatgtgtg
     3121 acccacctgc aaagtaaggg cagggggcgg caggggcgga agtggtcgca ccgtttgggc
     3181 gagtgtctga tgttcagttt tggctgggtg tttgaccggc cgcaatatga gctgggttcg
     3241 ctgtcgcctg ttgcggcagt ggcgtgtcgg cgcgccttgt cgcgtttagg tttggatgtg
     3301 cagattaagt ggcccaatga tttggttgtc ggacgcgaca aattgggcgg cattctgatt
     3361 gaaacggtca ggacgggcgg caaaacggtt gccgtggtcg gtatcggcat caatttcgtg
     3421 ctgcccaagg aagtagaaaa tgccgcttcc gtgcaatcgc tgtttcagac ggcatcgcgg
     3481 cggggaaatg ccgatgccgc cgtgttgctg gaaacgctgt tggcggaact tgatgcggtg
     3541 ttgttgcaat atgcgcggga cggatttgcg ccttttgtgg cggaatatca ggctgccaac
     3601 cgcgaccacg gcaaggcggt attgctgttg cgcgacggcg aaaccgtgtt cgaaggcacg
     3661 gttaaaggcg tggacggaca aggcgttctg cacttggaaa cggcagaggg cgaacagacg
     3721 gtcgtcagcg gcgaaatcag cctgcggccc gacgacaggc cggtttccgt gccgaagcgg
     3781 cgggattcgg aacgttttct gctgttggac ggcggcaaca gccggctcaa gtgggcgtgg
     3841 gtggaaaacg gcacgttcgc aaccgtcggt agcgcgccgt accgcgattt gtcgcctttg
     3901 ggcgcggagt gggcggaaaa ggcggatgga aatgtccgca tcgtcggttg cgctgtgtgc
     3961 ggagaattca aaaaggcaca agtgcaggaa cagctcgccc gaaaaatcga gtggctgccg
     4021 tcttcggcac aggctttggg catacgcaac cactaccgcc accccgaaga acacggttcc
     4081 gaccgctggt tcaacgcctt gggcagccgc cgcttcagcc gcaacgcctg cgtcgtcgtc
     4141 agttgcggca cggcggtaac ggttgacgcg ctcaccgatg acggacatta tctcggggga
     4201 accatcatgc ccggtttcca cctgatgaaa gaatcgctcg ccgtccgaac cgccaacctc
     4261 aaccggcacg ccggtaagcg ttatcctttc ccgaccacaa cgggcaatgc cgtcgccagc
     4321 ggcatgatgg atgcggtttg cggctcggtt atgatgatgc acgggcgttt gaaagaaaaa
     4381 accggggcgg gcaagcctgt cgatgtcatc attaccggcg gcggcgcggc aaaagttgcc
     4441 gaagccctgc cgcctgcatt tttggcggaa aataccgtgc gcgtggcgga caacctcgtc
     4501 attcacgggc tgctgaacct gattgccgcc gaaggcgggg aatcggaaca tacttaaaaa
     4561 atacaccctt tttcaacacg gggcggtatc cgtccgaatc cgtccggatt ctgccgcccg
     4621 acagactgcc gcccaggcgg gcggggtttc aaacattgag gaaattctaa tgaaatggct
     4681 cttcaccctt ttggcggtac tcaatattgc cgtattcggc ggcacggtgg gctataaatt
     4741 ggccgttaaa gcgacgggcg gcgtgccgga aaaccgggcc gtcgaaaaca cgccccccgc
     4801 aacgcccgcc gccgacaatg cggcggcatc cgtggaggat acggcggcac tgctcaaacc
     4861 gggcgacatc ctgaccgaag agcaggcgga gcagttgcgc ttgaagaaag aagcggaaca
     4921 gaaaaaactg agggagaaaa aacagcgtga agaaaaagcc cgccgcgaaa aactcgccgc
     4981 cgaaaaggcg caggcggaac gcgaaaacgg cgcggcggat gccttatgcg ccgcgcaggc
     5041 aagcctcacg atggacgaag atgactacca ccgcatcaaa ggacttttgg gcaaatggtc
     5101 gcacgttgcc agcaggagcg tcgaaaaacg caccgcccaa gccaaacctg ccgacaaaac
     5161 ctaccgcgtc gtcctgcccg tttccgccga tgccgaaaat caggcggcgg agctgtctgc
     5221 caaaggtttc aaccccatac cgtttgacgg cgcattgagt ttgggtgtcg gcaacagccg
     5281 ggaaaacgcc caagccctgc aaaaccggct tgccggcgcc ggattcggcg gggcgcatat
     5341 tgtcgaacac tttgccgaag ccgacaggca ggacgattct ttgagcgtgt cgcgtatgac
     5401 ggttttgttt accggcgtga atgccgccga tgcggaagaa attcgtaaaa tcacgtccct
     5461 atacggcaaa ctgaacctca agtcttgcaa ataggcgcga aagccggacg ataaacgcca
     5521 aacccaccgc gaaggtgggt ttggcgtttc ggttttgagt atctgatata taaaaaggga
     5581 atgtatgtct cgtatatgcc gactccaagt gtgaaagtga tgatggggaa atatggtgtt
     5641 taatggttcg gaacggacgg cttccgagtg gttttgatta tacgctaata ataataatta
     5701 tcaataaaaa tttaaaaata aatgcagatt ttttgtaata cgatgaaaaa taaacaaatt
     5761 aacctgtccg ccgatgtttg tgattcgggt cggcaaactt tcattgtgtc ggacaaatcg
     5821 gggtcggcag tcatagctga gggcttcgtg cctgacggaa ataaggttgc ccgtgtttga
     5881 acatccgtcc gattgggcgc ggacagggtt gtcattcggg ggtgtttgag cgtggattcg
     5941 gggatgcgaa agcggtaaaa ccgttgcgga tgaaggctta cggacggctt taggtatttt
     6001 taagtgtatt caaacaacaa caaaacgctt cttctattgc cgtatttagg gcttgcgcgg
     6061 cagcctgcac accgtggagg ccgagtgttt cgttggttgc ggcatcggga cgggcggcaa
     6121 ggttttccgg ccggtttttc cattttttcc gacaaagccg tgatgccggg gaatggcggt
     6181 ttgtccgttt cggaccgccg ccgttttgag ccgcgatgcc gtctgaagcc ttcagacggc
     6241 atttttgccg cctttttcaa tattccgccg aatgccaaaa cggctgtccg actgtcggcg
     6301 tgctggcttg cgctttgtcg cgtgcttcga ccggtccggc ttcaaatgcc agccgtccgg
     6361 attcgacggc gagtgcgaag gcgcgtgcca tattgactgg atcgccgctg cgggaaacgg
     6421 cggtgttcaa aagcacgccg tcaaagcccc attccatcac ttgtgccgcc tgtgagggca
     6481 aacccaagcc cgcgtcgata atcagcggcg tgtagggcag gcgttcgcgc aggacgttca
     6541 acgcgtaggc gtgaaccgcg cccaaacccg tgccgatcgg ggccgcccac ggcatcaacg
     6601 cctgacagcc cgcgtcgagc aggcggcggc aggcaatcag gtcttcggtg caataaggca
     6661 gcactttgaa gccgtcttta atcaggattt ccgccgcttc gacaagctgg aacacatccg
     6721 gctgcaaggt gtcgtcatct ccgatgagtt ccaattttat ccaatcggtt tcaaacactt
     6781 cgcgcgccat ttgcgccgtc gttaccgctt cctgcacgct ttggcagcct gccgtgttcg
     6841 gcaggacggg aacgccggtt tcttgaagca gcgaccaaaa cccctgaccg tgtgcctccc
     6901 caccgcttcc cgcgcggcgc agcgagacgg taatcatcgc aggccgggcg gttcggacgg
     6961 attgtttgag gatttcaggg gtcgggtagg cagccgtgcc gagcagcagc cgtgaaggga
     7021 aagtttctcc gtatagggtg agcataatgg gtt
//
LOCUS       DAWKOX010000105         7046 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.105, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000105 DAWKOX010000000
VERSION     DAWKOX010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7046)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7046)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7046
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.105"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..1581
                     /locus_tag="WJK78_001437"
     CDS             <1..1581
                     /locus_tag="WJK78_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ7598354.1"
                     /translation="QEGEQSAAASAVSNDPQPQKQPAPQKDRLKPLPLADIRTFQAWL
                     KTAERENPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVT
                     MTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIRRICVPVPDFITKFLENNP
                     DRQAAIIPQLAHFIAKSASDMRILEQIDQDAWAAQDLPEHCYLNLRIIDDGGQELAGG
                     RKLHELQQQLGKAAATTFRDNTQEFERDNVTTWDIGILPESIKFARGKQQLTGYLGLQ
                     KEKDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHI
                     NADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAA
                     AYAELNGKLGKHPLTHLLRLRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSS
                     NPARDAAREADIQELEQMWQEKTDSLVKQGLPISDGLAGFKWMIEELRVSLFAQELKT
                     PYPVSVKRLMKEWERLNK"
     gene            1640..3247
                     /locus_tag="WJK78_001438"
     CDS             1640..3247
                     /locus_tag="WJK78_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ7598355.1"
                     /translation="MKSENNYERIVQNSKKFQHSQKNEMQKRITDLLQQLTNGIHERD
                     QIMAVSLLGAIAGHNTFLFGPPGTAKSLISRRLACAFENPQYFEYLMNRFSTPEEVFG
                     PVSIKALKEDRYLRKIEGYLPTADFAFLDEIWKSSPAILNNLLTIINEHIFKNGDERF
                     NVPLKALIAASNEIPPENQGLEALYDRFIIRLLVPPIEQEENFNRLLDSKPSSDKPEI
                     SEDLRISYHELAKWREQLHKVRLSTDTLLIIKYIREELAAQFDKLGVYVSDRRWQRAA
                     VLLKASAFCNGRKETNHSDVILLKYCLWTTPENRESVEQIVMNAIKSCGFDTGIDLAE
                     LDREKESLDKEINKELYHSQDVYETVEMSGKKYFPVQAVFKNVHNSHANKELKIYVPY
                     SKFRSKEKFYPIDSTGNEIQEIECEFDGQGCCKLELKVRGGHWNEQYKPLKFKPNILF
                     HKGDKKSDVNERLIHSLTQSISDIRKQLIDTQKQVEKKYEKYQQYLQSPFVAQADIDV
                     AISGILDQIDKLNLRIKDCERLESLCR"
     gene            3238..4698
                     /locus_tag="WJK78_001439"
     CDS             3238..4698
                     /locus_tag="WJK78_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003758253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEZ7598356.1"
                     /translation="MSLNRKLSEQIRWIKASLQIDYADLFKQHGSLNGQIQQRLSDWQ
                     YQAKLALLQKNPFILHEEKLKKHQQTEIFNQQSVDDYRYFCKLAGVPFEKEFWQQELT
                     QSKNSKPNKQNLPLKLLTGKWQQQLDYAKSQWYLKQLNQLRQEFIDKLKQELDTIRQL
                     AEQLEQFGFEAGLWFDNSIGNLSQQNIEEMKRWLNYLTQDKNAQQIAELLGKMRQIEQ
                     SEKIEQVKQTVYTKSPQIDVNSREEIIGLRLGKDLEYVLPSELALMADEETSTLFDLK
                     FLESKLMCFELQGMTYCDAPTEIIVEQKSQEDEKLGPMILCVDTSGSMVGLPENIAKA
                     MALFLGAKAKSENRSCFVINFSTGIETFELTSKTGISNLIAFLRQSFHGGTDAAPALR
                     HALKMMEQEIYQKADLLMISDFVMNSLPDDLLASIEIQRETGNQFNSLVIGDAFMSKR
                     LKTHFDREWIYNPNVQTIQELVQFKKDIFNKQVVNS"
     gene            complement(5052..5525)
                     /locus_tag="WJK78_001440"
                     /pseudo
     CDS             complement(5052..5525)
                     /locus_tag="WJK78_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            5757..5969
                     /locus_tag="WJK78_001441"
     CDS             5757..5969
                     /locus_tag="WJK78_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598357.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            6266..6421
                     /locus_tag="WJK78_001442"
     CDS             6266..6421
                     /locus_tag="WJK78_001442"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ7598358.1"
                     /translation="MSERKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            complement(6511..6960)
                     /locus_tag="WJK78_001443"
     CDS             complement(6511..6960)
                     /locus_tag="WJK78_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ7598359.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT         2203 a         1634 c         1432 g         1777 t
ORIGIN      
        1 caggaggggg aacagagtgc cgcagcttca gcggtttcaa acgaccctca accccaaaag
       61 cagccagcac cccaaaaaga ccgtctgaaa cccctccccc tcgccgacat ccgcaccttc
      121 caagcctggc tcaaaaccgc cgaacgcgag aacccgcgcc tgctgttcct cagccgcgac
      181 gatttgatgc aacacgccgc cgcacacatt accgaagaac agttccccaa attctggcaa
      241 accgcagacg gcaagttcaa actttcctac cgctttgagc cacaccatcc gctcgacggg
      301 gtgaccatga ccgtgccgct gaccgtcctc aaccgcctgc atgcgccgtc gctcgaatgg
      361 ctggtgcccg gtatgttgcg cgaaaaaatc cagctgctga ttaaagcact gccgaagcaa
      421 atccgccgca tttgcgtgcc cgtacccgat ttcatcacca aattcctcga aaacaatccc
      481 gaccgccaag cggccatcat tccccagttg gcgcacttta tcgccaaaag cgccagcgat
      541 atgcggattc tcgagcaaat cgaccaagac gcatgggcgg cgcaagactt gcccgaacac
      601 tgctatctga atctgcgcat tatcgacgac ggcggacaag agcttgccgg cggccgcaaa
      661 ctgcacgaat tgcaacaaca gctcggcaaa gccgccgcca ccaccttccg cgacaacacc
      721 caagaattcg agcgcgacaa cgtaaccaca tgggacatcg gcatcctgcc cgaatccatc
      781 aaattcgccc gcggcaaaca acagcttacc ggctatctcg gcctgcaaaa agaaaaagac
      841 ggccgcatcg ccctgcgcct atttgacacc accgaagccg ccgaacaggc acaccgtcaa
      901 ggtgtcatcg aattaatgaa gctgcaatta aaagagcagg tgaaagattt gaacaaaggc
      961 atccagggct tcacccaagc cgccatgctg ctcaaacaca tcaacgccga caccctgcgc
     1021 gacgacctca cccaagccgt ttgtgaccgc gcctttatcg gcgaagacga gctgccgcgc
     1081 aacgaaaaag ccttcaaaga acaaatcaaa cgcgcccgca gccgcctgcc cgccgtcaaa
     1141 gaagccctca gccgctacct gcaggaaacc gccgccgcct acgccgaact gaacggcaaa
     1201 ctcggcaaac acccattgac ccaccttcta agactacgcc tgcaaaccct gctcgccgcc
     1261 ggcttcgcca cccgcacccc gtgggcacaa tggccgcgcc tccccatcta tctcaaagcc
     1321 atgaccctgc gcctcgaaaa atacagcagc aaccccgccc gcgacgcagc ccgcgaagcc
     1381 gatatccaag agctggaaca aatgtggcag gaaaaaaccg atagcttggt gaaacaagga
     1441 ttgcccattt cagacggcct tgcagggttt aaatggatga ttgaagaatt gagggtgtcg
     1501 ctgtttgcgc aggaattgaa gacaccgtat ccggtgtcgg tgaagcggct gatgaaggag
     1561 tgggagaggt tgaataagta gtgatattat ccaatacatt tacaggaaaa tttctaactt
     1621 acataaaagg tacaactcaa tgaaaagcga aaataattat gaacgtattg ttcaaaattc
     1681 taaaaaattc caacactctc agaagaatga gatgcagaaa cgcataacag atttgctgca
     1741 acaactcaca aatggcattc atgaacgcga ccaaattatg gcggtttccc tacttggtgc
     1801 gattgccgga cataatactt tcctatttgg accgccggga accgcgaaaa gtctgatttc
     1861 ccgccgtttg gcatgtgcat ttgaaaatcc gcaatacttt gaatacttga tgaaccgttt
     1921 cagcacacct gaagaagtat tcggacctgt atctattaag gcattgaaag aagaccgata
     1981 tctccgaaaa atcgaaggct atttgccaac tgccgatttt gcatttttgg atgaaatttg
     2041 gaaatccagt cctgcaattt tgaataacct gctgaccatt atcaacgagc atatttttaa
     2101 aaacggcgat gagaggttta atgtgccact taaagccctg attgcggctt ccaacgaaat
     2161 tccacctgaa aatcaaggtt tagaggcact gtatgaccgc tttattatcc gtctgcttgt
     2221 gccgccgatt gaacaagaag agaacttcaa ccgtttgctg gatagcaaac caagcagcga
     2281 caaacctgaa atcagtgaag atttacggat tagttatcat gagcttgcca aatggcgtga
     2341 acaactccac aaagtcaggc taagtacaga tacattactg attattaagt atatcagaga
     2401 agaattagca gcccagtttg ataagttagg cgtttatgta tccgaccgac gttggcaacg
     2461 tgcagccgta ttattaaagg cttctgcttt ttgcaatgga cgcaaagaaa ccaatcatag
     2521 cgatgtgatc ttgctgaaat attgtctgtg gacaacacct gaaaatcgag agtcagtgga
     2581 acaaattgtg atgaatgcca ttaaatcctg tgggtttgat acaggtattg atctggctga
     2641 attagataga gaaaaagaga gtttggataa ggaaataaat aaggaacttt atcattcaca
     2701 agatgtttat gagacggttg aaatgagtgg aaaaaaatat tttccagtac aggctgtttt
     2761 caaaaacgta cataatagtc atgctaataa agaacttaag atttatgttc catatagcaa
     2821 atttcgtagt aaagaaaaat tttatccaat agatagtaca ggaaatgaaa ttcaagaaat
     2881 tgaatgtgaa tttgatgggc aaggttgctg taaattggaa ttgaaagtgc ggggtggtca
     2941 ctggaatgag caatataagc cattaaaatt taaacccaat atcttatttc acaaaggaga
     3001 taaaaaatca gatgttaacg aacgtctaat tcattcacta acccaatcta tatctgatat
     3061 tcgcaaacaa ttgattgata cacagaaaca agttgagaaa aaatacgaaa aataccagca
     3121 gtacctgcaa agcccctttg ttgcccaagc agatattgat gttgctatat caggtattct
     3181 agaccaaatc gataaactca atttgcggat taaagactgc gaacgtttgg agtctttatg
     3241 tcgttaaaca gaaaattatc cgaacaaata agatggatta aagcttctct acaaatagat
     3301 tatgcagatt tatttaaaca gcatggttcg ttaaatggac agattcagca acgtttatca
     3361 gattggcaat atcaggccaa actggctttg ttgcagaaaa acccatttat attacatgaa
     3421 gaaaagctaa aaaaacacca acaaacagaa atttttaatc aacagtctgt tgatgattat
     3481 cggtattttt gcaaattagc aggcgtgcca tttgaaaaag aattctggca gcaggaatta
     3541 acacaaagca aaaattcaaa acccaataaa cagaatttgc ctttgaaatt gctaacagga
     3601 aaatggcagc agcaattaga ctatgccaaa tctcaatggt atttaaagca acttaatcaa
     3661 ttacgacagg aatttataga taagttaaaa caggaactcg acactatccg acagcttgca
     3721 gaacagttag agcaatttgg ttttgaagca gggctgtggt ttgataacag tatcggcaat
     3781 ttaagccagc aaaatattga agaaatgaaa cgctggctga attacttgac ccaagataag
     3841 aatgcccaac agattgctga attactaggc aaaatgcgcc aaatcgaaca atctgaaaaa
     3901 atcgaacagg taaaacagac tgtttacaca aaaagcccac aaattgatgt gaattcgcgt
     3961 gaagaaatta tcggattacg tttaggtaaa gatttagagt atgtattgcc gtctgaattg
     4021 gctttaatgg cagatgaaga aacatcgact ttatttgatt tgaagttttt ggaatccaaa
     4081 ttaatgtgtt ttgaattgca aggaatgacc tattgcgatg ccccaactga aattatagtt
     4141 gaacaaaaaa gccaagagga tgaaaagctc ggaccaatga ttttatgtgt agataccagt
     4201 ggttcaatgg ttggtctacc tgaaaatatt gccaaagcaa tggctttatt tttaggagca
     4261 aaagctaaaa gcgaaaaccg ttcttgtttt gttatcaatt tttccactgg aatagaaact
     4321 tttgaattaa caagtaaaac agggatttcc aatttgattg cttttttacg tcaatccttt
     4381 catggtggta cagatgctgc cccagcttta cgtcatgcgc taaaaatgat ggagcaagaa
     4441 atctatcaaa aggcagactt attaatgatt tccgattttg tgatgaacag cttacctgat
     4501 gatttgttgg catcaatcga aatacaacga gaaaccggta atcagtttaa ttctttggtt
     4561 attggtgatg cttttatgag taaacgccta aaaacacatt ttgatcgtga gtggatatac
     4621 aatcctaatg ttcagacaat tcaagaatta gtacagttca agaaagatat tttcaataaa
     4681 caagttgtca actcataaca ctatcctact catatgtatt tttggaagat accaccctat
     4741 acaacttgga atccatacgc agaatatgtg tggactttct aaactactcc cctttccacc
     4801 ctaaaaaagg tcgtctgaaa cccattttca gacgaccttt ttccacttcg caaaacaaga
     4861 attcccaccc ctctccccaa acgtcgcccg aaccagtaaa ctccccatat ttcaacaact
     4921 tcttggaagc caaccatgcc ccgtatccac cctcctcacc tgttcccgcc ccatatcgcc
     4981 gaacgcggcc ttttgtattt tcagcagggc aaggttcgcg atgtccgaaa aacttccgcc
     5041 gggcgttatc gggcctggcg ccgtttgctg ccggcggtct gaataatggt ggcgtcaacg
     5101 acggcagcgg atgctttctc tacttttagg tttttttcgg tcagttggcg gttaatcagt
     5161 ttgagcaatt cggacagggt gtcgtcttgc gccagccagt tgcggtaacg gcataaggtg
     5221 ctgtaatcgg ggatgctcag ttcgtcaaag cggcaaaaca ggttgaagtc gatgcgggtg
     5281 atgaggctgt gctcgagttc gggatcggag aggctgtgcc attgtccgag cagaacggct
     5341 ttgaacatgg acaacagcgg gtaggcggga cgaccgcggt ggtctcggag gtaacgggtt
     5401 ttttgacggt tcaggtattg ttcgatcggt tgccaatcaa tcacctggtc caacttcaat
     5461 agtgggaaac ggtcgatgtg tttggcaatc atggcttggg cggtttgctg aaagaaggtg
     5521 ctcatgagaa atctcctaaa tgtcttggtg ggaatttagg ggattttggg gagttttgca
     5581 aaggtctcag tctttttaaa ccacagccct tcccaactaa accaaaaggt cgtctgaacc
     5641 ctattttcag acgacctttt gccactttgt aaaacaaatc ttcccaccat cctctcccca
     5701 aacatcgccc gaaccagtaa acttctcata tttcaacaac ttcttggaag caaaccatgc
     5761 cccatatcca cccgctccac ctgttcccgc cccatatcgc cgaacgcgga ctgctctatt
     5821 ttcagcaggg caaagttggt gctgtccaaa aaacttccac cgggcgttat cgggcggagg
     5881 tatgcggttt ggaaaactat tgggtatggc tgaagctgga tagtgatttg tatattaaag
     5941 acgaaagctg cgattgccct tatgtctaaa ggtgcaaaca taccttaaat tactatatta
     6001 cataggcaaa atacaagcct ataacgaatt ggaaacaaaa tgccgtctga aagcattata
     6061 aaatctgttc accttttcag atgagtaatg tacaccccta tacaattttt gctactatac
     6121 cccataaatc cacggctaaa gatatcctta ttatgtccta tgatttatcg aaacgacttg
     6181 taatcggctt agcatcaagt gccctattcg acttatccga atcggataat atatttagaa
     6241 tggaaggggc agaaacctat aggcaatatc agagagaaaa acaaaaccat cccctaaaaa
     6301 aggcgttgtc tttccattta ttaaaaaact tctgtcaatc aatgaaataa acccaaacga
     6361 cccaacgatt gggtttattc ttttatccag aaacaatcca gatacagatt acgagtcata
     6421 actataggct taatattaca cgattctcat tccatcaagg cggaaaaccg cacaaatact
     6481 gaaacactat cgatcgattt gtaaacaagc ctacttaagt aacttgcagt ccttatcatt
     6541 tcctttaaaa taatccagcc cgtcactaca cgaactggcg gacttcttgc aaataaaggt
     6601 tactagattt tcattcatct taataataaa aggattttta tctttatcta tggctaccgc
     6661 cttcaacatg aatttactgt ctaaggcccc gcgcgcgatt ccattcaaac ggatacaaaa
     6721 gccttctgcc tctttaatcg gcaaacttgg ccatttggta gatgtttgtt taaatctccc
     6781 attctgcaga taaaactttt ccataaaatg tgcattttct aacaaggctg cccgcactgc
     6841 atttatcttt gctttctcaa cataattgcg atagctcgga taaacaatta aagcaagtac
     6901 agacaatatc aagaccactg atattaattc aaccagcgta aacccccgat tatcagtcat
     6961 tactttactt ccaataagaa cagattattc aacatatttc tttgaacaga cttactatcc
     7021 cattcagcag tatgcatatt tcccac
//
LOCUS       DAWKOX010000106         7001 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.106, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000106 DAWKOX010000000
VERSION     DAWKOX010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7001)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7001)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7001
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.106"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(74..1495)
                     /locus_tag="WJK78_001444"
     CDS             complement(74..1495)
                     /locus_tag="WJK78_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ7598360.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1510..1800)
                     /locus_tag="WJK78_001445"
     CDS             complement(1510..1800)
                     /locus_tag="WJK78_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HEZ7598361.1"
                     /translation="MQIYVKINSFFVFDRLFIKDIYLFVLNKIIYQKEHIFPSTAIRL
                     PAAFRFGKLVYPDYLLYNQSENFFQKQTGSTVRLCPGGTVPVSLPRAAQGSA"
     gene            complement(1853..2212)
                     /locus_tag="WJK78_001446"
     CDS             complement(1853..2212)
                     /locus_tag="WJK78_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ7598362.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2209..2814)
                     /locus_tag="WJK78_001447"
     CDS             complement(2209..2814)
                     /locus_tag="WJK78_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ7598363.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGILQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2861..3343)
                     /locus_tag="WJK78_001448"
     CDS             complement(2861..3343)
                     /locus_tag="WJK78_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ7598364.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3547..3644
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3855..4955
                     /gene="gcvT"
                     /locus_tag="WJK78_001449"
     CDS             3855..4955
                     /gene="gcvT"
                     /locus_tag="WJK78_001449"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ7598365.1"
                     /translation="MITLKTTPFHQAHQDAGAKLVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYCIVSNGATREKDTAQFHKVGQEFGVSFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVNNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQQA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLDKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEVDVRVLKLPFVRNGQKQFD"
     gene            5117..5503
                     /gene="gcvH"
                     /locus_tag="WJK78_001450"
     CDS             5117..5503
                     /gene="gcvH"
                     /locus_tag="WJK78_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ7598366.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            5650..6897
                     /locus_tag="WJK78_001451"
     CDS             5650..6897
                     /locus_tag="WJK78_001451"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ7598367.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPKAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYALDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         1791 a         1674 c         1959 g         1577 t
ORIGIN      
        1 gtcggaaggg gggatattga tttgattatg ccggaattta aaatgccgtc tgaatgttca
       61 gacggcatag cgtttacagc agtttgaaaa cgaaaaagat aagggtatgt acgatgaaga
      121 cgggtgtcag gaaggcgacc gaccacatca tatagccgaa gaaagtcggc atcggtacgc
      181 cgcgctgttc ggcaatggcc ttgaccatga agttcggtgc gttgccgatg taggtcagtg
      241 cgcccatgaa taccgaaccc atagaaaccg ccagcagcga atgaaacagg gtacccgtca
      301 tcaaggcttg ggcatcgccg cccgccatat tgaaaaaaac gagataagtg ggcgcgttat
      361 ccaagaatgc cgacaatatg ccgctcatcc aaaaatacat cacattaatc ggatgacctg
      421 ccgtatcgtg aaccagcgat accaccccgc ccagcgcgcc tgcctcgcct gctttcagaa
      481 tgctcaggac gggaaagatg gtgatgaaga tgccgaggaa gagtttgccc acttcggcga
      541 tgggttcaaa gttgaattcg ttgcctgcgc ggacttgttt gggcgtgatt gccatagata
      601 cggcggtcaa tgcaatcagg atgacatcgc ggacgaggtt ttgcagggcg taacggctgc
      661 cgaggatttc aaatcccggg tgttcgggtt tccaaaggcc ggacattaga accgcgccga
      721 ccacgcccga aagcaggagg aagttccatt tgccgaagat ggcgattttt tcgggttttt
      781 cctgttgtgc cggcgtatct tgtgcaatgc tttcctgttt gaagaaacgg ttgtcgatga
      841 aatagaaggc ggtcaacagg acagcggtgc tgatcaggac gggggcgaac atatgtttga
      901 ccgtccacat gaaatctacg cctttgagga agccgaggaa gagtgggggg tcgcccaaag
      961 gggtcagacc gccgccgatg tttgcaacca agaaaatgaa gaagatgacg atgtgcacgc
     1021 ggcgggtacg gttttggttg gctttcagca gcggacgaat catcagcatt gctgcgccgg
     1081 tcgttcccat gatagaggca agtgcagtac cgacggcaag cagggcggtg ttgagcttgg
     1141 gtgtgccgtt caagtcgccc caaaccaaaa tgccgcctga aatggtgtac agggcaagca
     1201 gcagcaggat gaaggggatg tattcttcaa cgagtgcgtg tgcgacggta tggataccgg
     1261 cggacgcgcc aaaaaccaaa ctgaacggga tgaggaagag caatgtccaa aaggcggtaa
     1321 ttttgccgta atggtgatgc caggtatgcg aaaaaaacaa gggacccaat gcgatagaca
     1381 gcaaaatcag ggcaaagggc aggccccaca gcaggtttag gtttgcgccg tccaaatctg
     1441 cggcgtaaac cgatgctggg aaaagcatta gtgaaaacag gggtaggtgg cgcatcgtgt
     1501 ttcctcgatt caagcactgc cttgcgcggc gcgtgggagt gatacaggca ccgtgccgcc
     1561 cggacatagg cggactgtgc tgcctgtttg tttttgaaaa aagttttccg attgattgta
     1621 aagtaaataa tcaggataaa ccagtttccc aaaccggaag gcggcgggaa ggcggattgc
     1681 cgtgcttggg aatatatgtt ctttttgata aataatttta tttaaaacaa ataaatatat
     1741 gtctttaata aataatctat cgaaaacgaa aaatgaattt attttaacat atatttgcaa
     1801 tgaaacaggt ttgccccccg tttgtttgcc cttatccctt tcagtacggc attcaagatt
     1861 cgggcctgcg ccacatccat atggcgacaa gggaacaaaa aaccgatgaa accgccccga
     1921 cccaccagcg ttggggaaac tgccaaaaca ttatcaggca ggatgcggtc atcatactga
     1981 tggcgaatat tttggctttg cgcggcactg cgccgttttg ttcccagtta tgaaccatcg
     2041 gaccgaaata gcggtgccgg tgcagccagc ggtgaaagcg cggggatgcc tttgcccagc
     2101 aggcggcgga gagcagtacg aacggcgtgg tcggcaacag cggcaaaaaa atgccgatga
     2161 tacccaacag cagggaaatg cagccgcagg caattaaaag ataacgtatc attttgaaat
     2221 atttttctta ttgtgcggat aagggcagga tgtgataccg agttttgccc agccttcatg
     2281 tcccattttt tccagcaggg cgatattgcg ttcgaatatt gccgaagcgt cgggaaaggc
     2341 ttgtgcggct ttggcaatgc tgtcttcgcg gatcagatgc agtgtcggat agggagaacg
     2401 gttggtgtag ttgccgatgt cgtcgggttc ggtattctga aagcggaatt ggggatggaa
     2461 cggtgcgatt tggaggatgc cttccaagcc gttttcgaca acggcggcat cggcaatatc
     2521 gagcatatcg ttgaatacgt cgaaatcggg gaatagggtc gggtgaacca gcagggtggt
     2581 ttccagttcg gtggcgggtg tattgcccag tcgctgcagt tcttcgtcca agtcttccaa
     2641 aaaaccgtca aggtgtttgg cttcgctgat cgcgatgcgg acaaggtttt taacgtgggg
     2701 ggctttggca aagggacaca ggttcagacc gatgacggct ttttccaacc attgtccggt
     2761 gtgttcggca acagcatctt tattttcgga agtattgata ttcattattg tcatgtaaat
     2821 gtgtttgcag attgcacgtg cgggaaaatc gggaagggca ctattccttc agcaggtggt
     2881 tgagtggcag ggaggtggtg tgtttgattt cttttaaaac aaagctcgat tgggcatcct
     2941 gtacgccgtg gtgggacagg agcgtatcca aaacaaaatg ggaaaacgcg ttcatatcgg
     3001 taaaaaacgc ctgaagcagg tagtcggttt cccctgtcag ggcgaagcag ctcaagactt
     3061 caggccattt tcgaaccgat gcggcaaagt cttcccgcgc gtcttttgct ttgcggatgg
     3121 aaacgcggat aaatgcctga agccccaggt tgacggattc cggagacagc agcgcggcat
     3181 attggcggac gatgccggca tcttccaact gcttcagacg gcgcaggcac ggagaaggcg
     3241 aaagtgcgac acgttcggac agttcgacat tggtcagcct gccgttttcc tggagaacct
     3301 gtaagatttt aatatcggtt ttgtctaaag tgagttgggg catatttgcg ttccgtttta
     3361 aggaattcgg attgtctgtc cgtatgtttg cggcaatccg cacagatgga gaccatatta
     3421 acatataaaa agttataccg tcatccggga caaattttgt tttcggaaaa tcatgtgaaa
     3481 acagaggcgg tcggtttgca tctcttttaa gacggcttgc ccaaaccgcc gattcaagac
     3541 ataatcggga aatgtgcagg agagtgttac acccaactac aatgtaacca ccgaaggcgc
     3601 agacaccctt aaatcgctca ggtatcaggg actgcacatt gaaacaaaca atctggagag
     3661 cggcgttgga ataacgtcca ccgaagggga gaaggccgtc tgaaccacca ttcagacaac
     3721 cgcgcaaagc agtgagcaga ctggtttgcc atcatgcgga tacggccgaa aatctcaggt
     3781 tcaaggacag atagggtcat ccgcgcacag gtgcgcgggt ggcatctgaa caaaaaatcc
     3841 ggagaaactt gagaatgatt actctgaaaa ccaccccatt tcatcaagcc catcaagatg
     3901 caggcgcgaa gctggtagat tttgccggct gggagctgcc catccattat ggttcgcaaa
     3961 tcgccgaaca cgaagccgtg cgcaccgacg caggtatgtt tgacgtatcc catatgcttg
     4021 ttaccgacgt agcaggcgca aatgccaaag cctttttccg caaattgatt gccaacgatg
     4081 tcgccaagct cgcttttgtc ggcaaagccc tttattccgc tttgctcaac gacaacggcg
     4141 gcgtgattga cgacttgatc gtttaccgca ccaatgaagc cgaaacccaa tactgcatcg
     4201 tgtccaacgg cgcgactcgc gaaaaagata cggcacaatt ccacaaagtc ggacaagagt
     4261 tcggcgtttc tttcaatccg cgctacgacc tcggcatgct cgccgtacaa ggcccgaaag
     4321 ccatcgagaa actcctgacc gtcaaacccg aatgggcaga tgtcgtcaac aacctcaaac
     4381 cgttccaagg cgcggatttg ggcaacgact ggtttgtcgc ccgcaccggc tacaccggcg
     4441 aagacggcgt cgaagtcatc ctgcccggca ccgaagccgt cgcattcttc aaagccctgc
     4501 aacaagccgg cgtacaaccc tgcggcctcg gcgcgcgcga taccctgcgc atggaagccg
     4561 gtatgaacct ctacggcaac gatatggacg acgacaccag cccgctcgaa gcaggcatgg
     4621 gttggacggt tgatttgaaa gacgaaagcc gcgattttgt cggtaaagcc gccttgctgg
     4681 cattgaaaga aaaaggcgtt gccgtcaaac aggtcggtct gttgctcgac aaaggcggca
     4741 tcctgcgcgc gcatatggaa gtgttgaccg acaaaggcaa aggcgaaacc accagcggcg
     4801 tattctctcc aagtctgaaa caatccatcg ccatcgcccg cgtgccgaaa gactttgacg
     4861 gcgataccgc caaagttctg attcgcggca aagaagtgga cgtacgcgta ctgaagctgc
     4921 cgtttgtgcg caacggacag aaacagtttg attgatgcgg tttcagacgg cattttcatt
     4981 tcatatgccg tctgaaagca ggttttaatt gttgtccgat acggacgttt gtagaaagca
     5041 ttgaacaagg catctgtgga tattgattca tgcagatgcc gtctgaaaat aacccctatc
     5101 aatggagtat caaaccatga gcaacaacat cccggccgaa ctgaaatacg ttgccagcca
     5161 tgaatggctg cgccttgaag aagacggtac gattaccgtc ggcattaccc accacgcgca
     5221 agagctgttg ggcgacatcg tgttcgtcga gctgcccgaa gtcggcgcga accttgccgc
     5281 tgaagagcaa gccggtgtgg ttgagtctgt aaaagccgcg tccgacgtgt acgcaccgat
     5341 tgcaggcgaa gtcgttgccg tcaacgaaga tttgccaagt gctccggaaa ctgccaacag
     5401 cgattcttac ggcgcaggct ggttcttcaa aatcaaacct gtcaatcctg ccgattacga
     5461 cggtctgctg actgccgaac aatacgcggg cgaagtggac taaatctcta tcctgataat
     5521 gggatgactg atttgagaaa ctgcactttc agacggcaag gatgcgtttg gaagtgcagt
     5581 ttttgtctgt gtcttcaaag ttcagttagg ctataataac ggtctatatt catctttacc
     5641 gattttttca tgcaacttac cgctgtcgga ctcaatcatc aaaccgcacc tttaagcata
     5701 cgggaaaagc tggcgtttgc cgccgccgcc ctgcctaaag ccgtccgcaa tcttgcccga
     5761 agcaatgcgg caacggaggc ggtaatcctt tctacctgca accgcaccga gctttactgc
     5821 gtcggtgatt cggaagaaat catccgatgg cttgccgatt accacagttt gccgattgaa
     5881 gaaatccgtc cgtatctgta cgcgctggat atgcaggaaa ccgtgcgcca tgccttccgc
     5941 gttgcctgcg gcttggattc gatggtgttg ggcgagccgc agattttagg acagattaag
     6001 gatgcggtca gggttgctca agagcaggaa agtatgggta agaaactcaa tgccctgttc
     6061 caaaaaacct tttctgttgc taaagaggtc cgtaccgata ctgccgtcgg cgaaaactcg
     6121 gtttccatgg cttccgcttc cgtcaaattg gcggaacaga tttttcccga catcggcgat
     6181 ttgaatgtct tgtttatcgg cgcaggcgaa atgattgagc tggttgccac ttattttgcc
     6241 gccaaaagtc cccggctgat gacggttgcc aaccggacgc tggcgcgtgc acaggagttg
     6301 tgcgacaagc tcggtgtcaa cgccgaaccg tgcctgctgt ccgatctgcc tgccattctg
     6361 cacgattacg acgtagtggt ttcttcaacg gcaagccagt tgcccattgt cggcaaaggc
     6421 atggtggagc gtgcattgaa acaaaggcag agtatgccgt tgttcatgct tgatttggca
     6481 gtgccgcgtg acattgaagc ggaagtcggc gatttgaatg atgcctatct ttatacggtg
     6541 gacgatatgg tcaacatcgt ccaaagcggc aaggaggcaa ggcagaaggc cgccgccgcc
     6601 gccgaaacgc tggtatccga gaaggttgcc gaatttgtca ggcagcagca gggcaggcag
     6661 agcgtcccct tgattaaagc cttgcgggac gagggcgaga aagcgcgcaa gcaggtgttg
     6721 gaaaatgcga tgaaacagct tgccaaaggc gcaacggcag aagaggtttt ggaacggctg
     6781 tccgtccaac tgaccaacaa gctgctgcat tcgccgaccc aaactttgaa taaggcgggg
     6841 gaagaagata aagatttggt tcatgccgtc gcgcagattt atcatttgga caaataacgg
     6901 tgcgccggaa aaggatgccg tctgaagggg tttcagacgg catatttttg tgctgtctga
     6961 caacatcgtg aaatcccaca ttatatcgat gtaatcacaa a
//
LOCUS       DAWKOX010000107         7000 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.107, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000107 DAWKOX010000000
VERSION     DAWKOX010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7000
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.107"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..231)
                     /locus_tag="WJK78_001452"
     CDS             complement(<1..231)
                     /locus_tag="WJK78_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ7598368.1"
                     /translation="MASSGVNNEIKDKKLSLWAKRQDGSVKWFCGQPVQRANANGANN
                     DEVTAATGKGTDKIDTKHLPSTCRDASSAVCTK"
     gene            complement(260..589)
                     /locus_tag="WJK78_001453"
     CDS             complement(260..589)
                     /locus_tag="WJK78_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ7598369.1"
                     /translation="MGGLIIEDLQEGFGKEAVKGKEITVHYTGWLENGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLAIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            complement(667..885)
                     /locus_tag="WJK78_001454"
     CDS             complement(667..885)
                     /locus_tag="WJK78_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEZ7598370.1"
                     /translation="MLKTLTFAALHFSTAFSVTYVLTGSIGVSGAVALVEPLINTVVF
                     YFHEKAWNLYEKNKTVQQTQPFQLHRCS"
     gene            1007..1960
                     /locus_tag="WJK78_001455"
     CDS             1007..1960
                     /locus_tag="WJK78_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ7598371.1"
                     /translation="MNHKKIVVLDADTLPGRVFHFDFPHELAVYGTTGADETAERVRD
                     AHIIITNKVMISADIIAHAPQLELIAVSATGVNNVDIEAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLARYAQAFGMRVVFAEHKHAPVVREGYVSFEDAVQTADVLSLHCPLNAQTENMIGEN
                     ELQQMKPGAVLINCGRGGLVDENALVAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(2035..4092)
                     /gene="metG"
                     /locus_tag="WJK78_001456"
     CDS             complement(2035..4092)
                     /gene="metG"
                     /locus_tag="WJK78_001456"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ7598372.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLDECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGVDFDEYFKADSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRLKDVSGSALLAKLAAESDTIAEQYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPILPKVAEN
                     AAKFLNLEAITWANTRETLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EESQYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYLNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(4207..6045)
                     /gene="glmS"
                     /locus_tag="WJK78_001457"
     CDS             complement(4207..6045)
                     /gene="glmS"
                     /locus_tag="WJK78_001457"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ7598373.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPTDVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSGEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGKLSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            6327..6845
                     /locus_tag="WJK78_001458"
     CDS             6327..6845
                     /locus_tag="WJK78_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598374.1"
                     /translation="MKQMLLAVGVVAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVFTGKEESMLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQHQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLF"
BASE COUNT         1465 a         1659 c         2102 g         1774 t
ORIGIN      
        1 ttttgtgcaa acggcagatg atgcgtcgcg gcaggttgac ggcaggtgct tggtgtcgat
       61 tttgtcggtg cccttgccgg tggcggcggt gacttcgtcg ttgttggcgc cgttggcgtt
      121 ggcgcgctga accggctgtc cgcagaacca ttttaccgaa ccgtcttgac gcttggccca
      181 cagggagagt tttttgtctt tgatttcgtt gtttacgccg cttgaagcca ttatgtcaga
      241 cggtattgcc cgggcagctt tattcgtaca ctttcagcag ctcgacttca aatatcaaag
      301 tggcgtgcgg gggaatcacg ccgcccgcgc cgtgtgcgcc gtagcccatt tccgaaggga
      361 tggccagctt gcgtttgccg ccttccttca tgccgccgaa gccttcgtcc cagcctttga
      421 tgacttgtcc gacaccgagc gtgatggtca gcggctggcg gcggtcgagg ctggagtcga
      481 atttggttcc gttttccagc caacctgtgt aatgcacggt aatctctttg cctttaactg
      541 cttcttttcc gaagccttct tgcaagtctt caataatcag gccgcccata tttgtccttt
      601 cgttgcttgt tggtcaaaac ggcaagggta acataccgtc cgtcgaagtc aaatgccgct
      661 caaacgtcag ctgcatcggt gcagctgaaa cggctgtgtt tgttggactg ttttattttt
      721 ttcgtaaagg ttccatgctt tttcatggaa atagaaaacg acggtgttga ttaggggctc
      781 gaccagcgcg accgcccccg atacgcctat actgcccgtc agtacatagg ttacactgaa
      841 ggcggtgctg aaatgcagtg cggcaaaagt cagggtttta agcatcatcc tctcccgaat
      901 tggacattga cggaggaatg ataaaggtta tcataaggtt gcgcggttta aatttgctat
      961 ttgttgttag tgtaaataaa tcatttttca aatggggata gaaattatga atcataaaaa
     1021 gatcgttgtt ttggatgcgg atactttacc cggccgggtt tttcattttg attttccgca
     1081 cgagcttgcg gtttacggta cgacaggtgc ggatgaaacg gcagaacggg tgcgcgacgc
     1141 gcatattatc atcaccaata aagtgatgat ttcagcggat atcattgcac acgctccgca
     1201 acttgaattg attgccgtca gtgcgaccgg tgtgaacaat gtcgatattg aggcggcgaa
     1261 ggcggcgggc gttgcggtat gcaatgtccg cgcctacgga aacgaatcgg ttgcggaaca
     1321 cgcctttatg ctgatgattg cgttaatgcg gaatttgccc gcctatcagc gtgatgttgc
     1381 ggcaggatta tgggaaaagt cgccgttttt ctgccattat ggcgcgccga ttcgggattt
     1441 gaacggtaaa acgctggcgg ttttcggacg cggcaatata ggacggacgc ttgcccgata
     1501 tgcacaggca ttcggtatga gggtagtgtt tgccgaacac aaacacgcgc ccgttgtgcg
     1561 tgaaggctat gtttcctttg aagatgcggt acagactgcc gacgtgttgt cgctgcactg
     1621 tccgctgaac gcccaaactg aaaatatgat aggcgaaaac gaattacagc agatgaagcc
     1681 cggtgcggtt ttgatcaatt gcgggcgcgg tgggctggtg gatgaaaatg cgctggttgc
     1741 cgcactcaaa tacgggcaga ttggcggggc aggtgtcgat gttttgacgg aggaaccgcc
     1801 taggggcggc aatcccttgc tgaatgcacg acttcccaat ctgattgtta cgccgcatac
     1861 cgcgtgggca agtcgtgaag cgttggacag gctgttcgat atattgttgg cgaacattca
     1921 cgcctttgtg aaaggcgagg cgcaaaaccg cgtggtttga acctgtcggg attgcggaaa
     1981 aaaatgccgt ctgaacgcct caagggttca gacggcattt tttgagattt ctgcttaacc
     2041 gactttgtcg cccggttgcg cgcctgcatc cacatccaag agcttcagtt tcccgtctgc
     2101 cgtggcggca gagagaatca tgccttcgga tacgccgaat tttgccattt tgcgcggggc
     2161 gaagttggcg acggcgatga ccatccttcc gtttaactcg gcagggttca ggtaagacgc
     2221 ggcgatgccg gagaagatga tgcgtttttc aaaaccgaaa tcgaggtcga atttcaaaag
     2281 tttggtgctg ccttcgacag cttcgcagtt caatactttg gcaacgcgca tatcgatttt
     2341 cataaagtcg tcgaagcttg cctgttcggc aactttttcg tattgacttt cttcggcggc
     2401 aggtgcggct gcggcggcga tgctttgttt gttggcttcg attaaatcgt ccacttgttt
     2461 ttgctccact cgttgcatga gatgttcgta tttgttgatg gcgtgttcgc ccaaggtttc
     2521 gcgtgtgttt gcccaagtga tggcttccaa attcaggaat ttggcggcgt tttcggccac
     2581 tttcggcaag atgggggcaa ggtaggcggt cagcatggta aaggcgttga tgagttcgct
     2641 gcatacttcg tgcaggcgtt cgtcttggcc ttcttgtttc gccagttccc aaggtttgtt
     2701 ggcatcgacg tattcgttga caatgtctgc caaggccatg atgtcgcgca gggcgcgggc
     2761 gtattcgcgg ttttcgtatt gctcggcgat ggtgtcgctt tcggcggcaa gttttgccag
     2821 caatgcgctg cctgaaacgt ctttcagacg gccttcaaag cgtttggcga tgaaacctga
     2881 tgcgcgggcg gcgatgttga cgtatttgcc gacgaggtcg ctgtttacgc gcgaaataaa
     2941 gtcttgcagg ttcaaatcga tgtcttcgat tttgctgttg agttttgcgg cgatgtagta
     3001 gcgcatccac tcggggttca ggccttgttc caaataagat ttggcagtga tgaaggtgcc
     3061 gcgcgatttg gacatttttt gtccgtctac ggtcaaaaag ccgtgtgcgt acacgccggt
     3121 cggggcgcgg tggccggaga aatgcagcat ggcaggccag aacagggcgt ggaaatagag
     3181 gatgtctttg ccgatgaagt ggtacatctc ggtttggctg tcggctttga agtattcgtc
     3241 aaaatcgacg ccgatgcggt cgcacaggtt tttaaacgac gccatgtagc cgacgggcgc
     3301 gtccagccag acgtagaagt atttgcccgg cgcgtcgggg atttcaaaac cgaaatacgg
     3361 tgcgtcgcgg gaaatgtccc agtcggacag ggtggtttct tcgccttcgc ccagccattc
     3421 tttcattttg ttgagggctt cgggttgcag atggggcttg ccgtcgtgcg gattgttgcc
     3481 ggaagtccat gctttgagga agtcggcgca ttcgtccagt ttgaagaaga agtgttcgga
     3541 ttcgcgcaat tcgggtttgg caccggaaac ggcggaatac ggattaatca gttcggtcgg
     3601 ggaataggtc gtgccgcaga cttcgcagtt gtcgccgtat tggtcttggg cgtggcattt
     3661 cgggcattcg cctttaacga aacggtcggg caggaacatt tgtttttcag ggtcgaaaag
     3721 ctgctcgatg acgcggcttt cgattttgcc gttggctttc agcgcgcggt aaatgtcttg
     3781 ggaaaactgt ttgttttcag gggaatgggt gctgtaataa ttgtcgtagc cgatgttgaa
     3841 accggtaaag tcggcgaggt gctcttcgcg cactttggca atcatgtctt cgggcgcgat
     3901 gccttgtttt tgcgcggcaa gcatcacggg cgtgccgtgg gtgtcgtcgg cgcagcagta
     3961 gtagcattcg tggccgcgca gtttttggaa gcgcacccaa acgtcggttt ggatgtgttc
     4021 gaccatgtgg ccgaggtgga tgctgccgtt ggcatagggc agggcggagg taactaagat
     4081 tttgcgtgtc atattgtgct ttgcaaacaa tgggtaaagg cggattatac cgcaaatcaa
     4141 acggggaaat gccgtctgaa gcctgaaaaa tcgggcttca gacggcattt tgccaatcgg
     4201 cgggatttat tcgacggtta cggatttcgc cagattgcgc ggcttgtcca catccgtgcc
     4261 gcgtgcgagg gcggtgtggt aggcgaggag ctgcacgggg atagtatgca cgacggggga
     4321 cagtttgccg acgtggcgcg gtgcgcggat aacgtgcaca ccttcggtgg cattaaaatt
     4381 gctgtcgagg tcggcaaaga cgaaaagttc gccgccgcgc gcgccgactt cctgcatatt
     4441 ggctttgact ttgtccaaca ggctgtcgtt gggtgcgatg acgacgacgg gcatgttttc
     4501 gtccaccaag gcaagcggcc cgtgcttcag ttcgccggca ggataggctt cggcgtggat
     4561 gtaggtgatt tccttcagtt ttaacgcgcc ttcgagggca atcgggtaat ggatgccgcg
     4621 ccccaaaaac agcgcgctgg ttttcttggc aaactgttgc gcccaagcgg caatttgcgg
     4681 ttcgaggttt aaagcgtgct gcacgctgcc gggaagctgg cggagttctt cggtataacg
     4741 tgcttcatct tcgccggata ccaagccgcg taccttcgcc agcgttaccg ccaaaccgaa
     4801 cagtgcgacc agctgcgtgg taaatgcttt ggtcgaggcg acgccgattt ccgcaccggc
     4861 acgggtataa agcacgaggc tgctttcgcg cggcagggcg gattccatca cgttgcaaat
     4921 ggagaggctg tggcggtgtc ccaaagattt ggcgtatttc aaagcctcca tcgtgtccag
     4981 cgtttcgccg gattgggaaa tggtaatgac cagttggtcc ggatcggcaa tcacgctgcg
     5041 gtatcggtat tcgctggcga tttcgacgtc ggtcggaatt ttggcgatgg attcgagcca
     5101 gtatttggcg gtcagcgcgg cgtaatagga cgtgccgcag gcaaggattt tgacgctgcg
     5161 gatgctttca aacacgcttt tggcgttttt gccgaagttt tcggggatga agccgccgtc
     5221 gaggaaaacc tccgccgtgt ctgcaatcgc gcggggctgc tcgtggattt ccttttgcat
     5281 aaagtggctg tacggcccca gctccaaaga ggcgagcgag agttcggata ccttgacttt
     5341 gcgttcggca ggcaggccgt ttttatcggt cagccttttg atgccgtctg aagccagcag
     5401 tgcgatgtcg ccgtcttcaa ggtacgccac gcggcgcgta aaggcgatga cggcggacac
     5461 gtccgaagcg ataaaggttt catcgtcgcc caaagcgacc aaaagcgggc agcccatacg
     5521 cgccacaact aattcatcag gcttgtcttg ggcaataacc gcgatggcgt atgcgccgtg
     5581 gaaacgtttg accgcttcct gcacggcttc aaacagcctg ccgccgtttt gcgcgtattc
     5641 gtgattgatg ctgtgggcga tgacttcggt atccgtttgc gattcaaacc ggtatcccaa
     5701 accttccaag cgtttgcgtt cgctttcaaa gttttcgatg atgccgttgt ggacgacggc
     5761 tatcatccca ccggaaatat gcggatgggc attcggctcg gtaacgccgc cgtgtgtcgc
     5821 ccaacgcgta tgcccgatgc cgatgccgcc gctgatgcct ttttcgcgtg ctgcgtcttc
     5881 cataagctgc acgcgtccga cgcggcgcac gcgtttgatt ttgccgtcgg tgttgacggc
     5941 aatgcctgat gagtcataac cccggtattc gaggcgtttg aggccgtcgg tcagaaaatc
     6001 gacgacgttg tgatgggcgc ggatggcgcc gacgataccg cacataactg ttccttagta
     6061 tccggttgaa aaaaaacagg cgcggacggc tcccgtgccg caccttcctc ttcggattat
     6121 aaaccgcctc ccgcgccgaa aaacagcaaa atgccgtctg aaggcttggg cttgctcaaa
     6181 aaagggaggg atttccccgc ctgaccggga tgggcgttca gacggcattg cctgccgccg
     6241 gtttatagtt tttacaaatc aatattgaca agctgaaaaa aaaaaacaat atactcgctc
     6301 ggtcttaatg ttaacggagt atggaaatga aacaaatgct tttagccgtc ggcgtggtgg
     6361 cggtgttggc gggctgcggc aaggatgccg gcggttacga gggttattgg cgcgaaaaat
     6421 cggacaaaaa agagggtatg attgccgtca aaaaagaaaa aggcaattac ttccttaata
     6481 aaatcaacgt gtttacaggt aaggaagaat ctatgctttt gtctgaaaaa gacggcgcgc
     6541 tttcgataaa cacggggata ggggaaatcc cgatcaaact ttccgatgac gggaaagagc
     6601 tgtatgtcga acgcaggcag tatgtcaaaa ccgatgcggc gatgaaggac aaaatcatcg
     6661 cccatcagaa aaagtgcgga caaacggcac aggcatatct cgacgcgcga aatgcgttgc
     6721 cgtcaaacca gacgtatcag cagcatcagg cggcgatcga gcagttgaaa cggcggtttg
     6781 aagccgagtt tgacgaattg gaaaaagaaa tcaaatgcaa cggcaaaccg acattgttgt
     6841 tttagcgtag gacaaccggg aggatgccgc cgtccgaatc ggacgtgcgg tttctgtacc
     6901 ggtacgggcg ggcaggaatg tccgcttttt ttgttcggac gcgtttgaat acccgtttga
     6961 ttccgtccgt ttgcaaaggg tatttttgtt cgggcggaaa
//
LOCUS       DAWKOX010000108         6981 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.108, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000108 DAWKOX010000000
VERSION     DAWKOX010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6981
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.108"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(111..1457)
                     /gene="mnmE"
                     /locus_tag="WJK78_001459"
     CDS             complement(111..1457)
                     /gene="mnmE"
                     /locus_tag="WJK78_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ7598375.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1588..1743
                     /locus_tag="WJK78_001460"
     CDS             1588..1743
                     /locus_tag="WJK78_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598376.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1740..2171
                     /locus_tag="WJK78_001461"
     CDS             1740..2171
                     /locus_tag="WJK78_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ7598377.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2305..6675
                     /gene="app"
                     /locus_tag="WJK78_001462"
     CDS             2305..6675
                     /gene="app"
                     /locus_tag="WJK78_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ7598378.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFTYKIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGRKYIDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPRQNGKYSFHD
                     NNNGTGKIDAKHEHNSLPNRLKTRTVQLFNVSLSETAQEPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGKVILDQQADENNKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDIATTGNNNSLDSKKEIAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLNDHWSQKEGIPRGEIVWDNDWINRTFKA
                     ENFQIKGGQAVVSRNVAKVKGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEK
                     TITDDKVIASLTNTDISGNVSLADHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNG
                     DLSLVGNAQATFNQATLNGNTSASGNASFNLSDHAVQNGSLTLSGNAKANVSHSALNG
                     NVSLADKAVFHFESSRFTGQISGSKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSATDAPRRRSRRSLLSVTPPASAESHFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAGKDNAQSLDALIAAG
                     RDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQREAETQPATTAFP
                     RARRARRDLPQPQPQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQDELDRVFAE
                     DRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTF
                     DDGIGNSARLAHGAVFGQYGIGRFDIGISTGAGFSSGSLSDGIGSKIRRRVLHYGIQA
                     RYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQ
                     HISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAA
                     AKGPQLEAQHSAGIKLGYRW"
BASE COUNT         1864 a         2015 c         1687 g         1415 t
ORIGIN      
        1 gccttgtcct gatttttgtt aatccactat aaaaccaaac ggatcggatt cccgttttta
       61 tgggataacg gaatgttcag ccggacaccg ccacgatgct ttcgatccgt ttattttccg
      121 atacaaaacc tcgaaaaaat cacgccgagc aggtcgtccg ccgtaaactc gcccgtgatt
      181 tcgccgcatg cgacctgcgc caagcgcaag tgttcggcaa acagctcgat ttgatggttg
      241 ccgcacaatg ccgccagcga caattcttcc tgcgctgctt tgagtgcgtt gacgtgccgc
      301 gtccgcgcca aaaacagccc ttcgccctcg ccctgccatc cggcctcgcg caacaacgtc
      361 cgtttcagcg cgtccaagcc gtcgccggtt ttcgccgaca gcgcgatgac ggtttccgcg
      421 cccgtaccga acccgcctgc cgcgtgtgcg tgcaaatcgg atttgctgtg gatttcgatg
      481 cgtttcaact ccggcggcaa cgcgtccaaa atcgcccgtg tcttgtcgtt cacgccttcg
      541 cgcggatcga ccaacaccag cgcgacatcg gcttcggata cggctttgcg gctgcgttcg
      601 atgccgatgc gttcgaccac gtcgtccgtc tcgcgcaaac ctgccgtatc gacaatatgc
      661 accggaacgc cgtcaatcag gatacgttcc ctgaccgcgt cgcgcgtcgt tccggcaata
      721 tcggtaacaa tcgccacttc gtcgcccgcc agcgcgttca acaggctgga tttgccgaca
      781 ttcggcgcgc cgaccaatac gacattcaga ccttcgcgca aaatcgcgcc ctgctgcgcg
      841 ttggcaagca catcatccac ggcgcggcgc aagccgtcca gtttgccgcg tgcgtctgcc
      901 gcttcgagaa aatcaatgtc ttcctcggga aaatctaacg tcgcttcgac cagcatccgc
      961 aaggtaatca agtcttcgac cagaccgtgt atccgccgcg aaaaatcgcc tttgagcgag
     1021 cgcaacgcca gacgcgccgc cgaacggctg gatgcgtcaa tcaaatccgc cacgccttcc
     1081 gcctgtgcca agtccagttt gtcgtttaaa aacgcacgct tcgtaaactc gcccggttcg
     1141 gcaaggcgcg cgcccaattc caaacagcgg ttcagcagca tatccatcac taccggcccg
     1201 ccgtgtccct gaagctcgat aacatcttcg cccgtaaaac ttgccggtgc ggcaaaaaaa
     1261 agcaaaagcc cgctgtcgat tgcctgaccg tccgcgtccg taaaatcagc ataggttgcc
     1321 acgcgcggct tgggcgtttt cccacacaaa gcctctgcca tcggcagcag gtttttcccc
     1381 gatatgcgta tcacgcccac gccgccgcgc ccgggtgcgg tagcgactgc cgcaatcgtt
     1441 ggaacgttat ccgacataaa acccccgaaa attcaaaaca gccgcgatta tagcaaatgc
     1501 cgtctgaagt ccgacggttt ggctttcaga cggcataaaa ccgcaaaaat gcttgataaa
     1561 tccgtccgcc tgacctaata taaccatatg gaaaaacgaa acacatacgc cttcctgctc
     1621 ggtataggct cgctgctggg tctgttccat cccgcaaaaa ccgccatccg ccccaatccc
     1681 gccgacgatc tcaaaaacat cggcggcgat tttcaacgcg ccatagagaa agcgcgcaaa
     1741 tgaccgaaaa cgcacaggac aaggcgcggc aggctgtcga aaccgtcgtc aaatccccgg
     1801 agcttgtcga gcaaatcctg tccgacgagt acgtgcaaat aatgatagcc cggcgtttcc
     1861 attcgggacc gttgccgccg ccgtccgact tggcgcaata caacgacatt atcagcaacg
     1921 gggcagaccg cattatggca atggcggaaa aagaacaagc cgtccggcac gaaaccatac
     1981 ggcaagacca aaccttcaac aggcgcgggc aactgtacgg cttcatcagc gtcatcctga
     2041 tactgctttt tgccgtcttc ctcgtatgga gcggctaccc cgcaaccgcc gcctcccttg
     2101 ccggcggcac agtggttgcc ttggcgggtg ctttcgtgat tggaagaagc cgagaccaag
     2161 gcaaaaatta atgacaaatc ctagggcgtg cttcatatcc gcccgaacgc cgaaccgcac
     2221 atataggcac atcccgcgcg ccgcccggaa gcggaagccg cgccctccca aacaaacccg
     2281 aatcccgtca gataaggaaa aataatgaaa acaaccgaca aacggacaac cgaaacacac
     2341 cgcaaagccc cgaaaaccgg ccgcatccgc ttctcgcctg cttacttagc catatgcctg
     2401 tcgttcggca ttcttcccca agcttgggcg ggacacactt atttcggcat caactaccaa
     2461 tactatcgcg actttgccga aaataaaggc aagtttgcag tcggggcgaa agatattgag
     2521 gtttacaaca aaaaagggga gttggtcggc aaatcaatga caaaagcccc gatgattgat
     2581 ttttctgtgg tgtcgcgtaa cggcgtggcg gcattggtgg gcgatcaata tattgtgagc
     2641 gtggcacata acggcggcta taacaacgtt gattttggtg cggaaggaag caatcccgat
     2701 caacatcgtt ttacttataa aattgtgaaa cggaataatt ataaagcagg gactaacggc
     2761 catccttatg gcggcgatta tcatatgccg cgtttacata aatttgtaac cgatgcagaa
     2821 cctgttgaaa tgaccagtta tatggatggg cggaaatata tcgatcaaaa taattaccct
     2881 gaccgtgttc gtattggggc aggcaggcaa tattggcgat ctgatgaaga tgagcccaat
     2941 aaccgcgaaa gttcatatca tattgcaagt gcgtattctt ggctcgttgg tggcaatacc
     3001 tttgcacaaa atggatcagg tggtggcaca gtcaacttag gtagtgaaaa aattaaacat
     3061 agcccatatg gttttttacc aacaggaggc tcatttggcg acagtggctc accaatgttt
     3121 atctatgatg cccaaaagca aaagtggtta attaatgggg tattgcaaac gggcaacccc
     3181 tatataggaa aaagcaatgg cttccagctg gttcgtaaag attggttcta tgatgaaatc
     3241 tttgctggag atacccattc agtattctac gaaccacgtc aaaatgggaa atactctttt
     3301 cacgacaata ataatggcac aggaaaaatc gacgccaaac atgaacacaa ttctctgcct
     3361 aatagattaa aaacacgaac cgttcaattg tttaatgttt ctttatccga gacagcacaa
     3421 gaacctgttt atcatgctgc aggtggtgtc aacagttatc gacccagact gaataatgga
     3481 gaaaatattt cctttattga cgaaggaaaa ggcgaattga tacttaccag taacatcaac
     3541 caaggtgctg gaggattata tttccaagga gattttacgg tctcgcctga aaacaacgaa
     3601 acgtggcaag gcgcgggcgt tcatatcagt gaagacagta ccgttacttg gaaagtcaat
     3661 ggcgtggcaa acgaccgcct gtccaaaatc ggcaaaggca cgctgcacgt tcaagccaaa
     3721 ggggaaaacc aaggctcgat cagcgtgggc gacggtaaag ttattttaga tcaacaagca
     3781 gatgaaaata ataaaaaaca agcctttagt gaaatcggct tggtcagcgg caggggtacg
     3841 gtgcaactga atgccgataa tcagttcaac cccgacaaac tctatttcgg ctttcgcggc
     3901 ggacgtttgg atttgaacgg gcattcactt tcgttccacc gtattcaaaa taccgatgaa
     3961 ggggcgatga ttgtcaacca caatcaagac aaagaatcca ccgttaccat tacaggcaat
     4021 aaagatattg ctacaaccgg caataacaac agcttggata gcaaaaaaga aattgcctac
     4081 aacggttggt ttggcgagaa agatacgacc aaaacgaacg ggcggctcaa ccttgtttac
     4141 cagcccgctg cagaagaccg caccctgctg ctttccggcg gaacaaattt aaacggcaac
     4201 atcacgcaaa caaacggcaa actgtttttc agcggcagac caacaccgca cgcctacaat
     4261 catttaaacg accattggtc gcaaaaagag ggcattcctc gcggggaaat cgtgtgggac
     4321 aacgactgga tcaaccgcac atttaaagcg gaaaacttcc aaattaaagg cggacaggcg
     4381 gtggtttccc gcaatgttgc caaagtgaaa ggcgattggc atttgagcaa tcacgcccaa
     4441 gcagtttttg gtgtcgcacc gcatcaaagc cacacaatct gtacacgttc ggactggacg
     4501 ggtctgacaa attgtgtcga aaaaaccatt accgacgata aagtgattgc ttcattgacc
     4561 aataccgaca tcagcggcaa tgtcagcctt gccgatcacg ctcatttaaa tctcacaggg
     4621 cttgccacac tcaacggcaa tcttagtgca aatggcgata cacgttatac agtcagccac
     4681 aacgccaccc aaaacggcga ccttagcctc gtgggcaatg cccaagcaac atttaatcaa
     4741 gccacattaa acggcaacac atcggcttcg ggcaatgctt catttaatct aagcgaccac
     4801 gccgtacaaa acggcagtct gacgctttcc ggcaacgcta aggcaaacgt aagccattcc
     4861 gcactcaacg gtaatgtctc cctagccgat aaggcagtat tccattttga aagcagccgc
     4921 tttaccggac aaatcagcgg cagcaaggat acggcattac acttaaaaga cagcgaatgg
     4981 acgctgccgt caggcacgga attaggcaat ttaaaccttg acaacgccac cattacactc
     5041 aattccgcct atcgccacga tgcggcaggg gcgcaaaccg gcagtgcgac agatgcgccg
     5101 cgccgccgtt cgcgccgttc cctattatcc gttacacctc cggcttcggc agaatcccat
     5161 ttcaacacgc tgacggtaaa cggcaaattg aacggtcagg gaacattccg ctttatgtcg
     5221 gaactcttcg gctaccgcag cgacaaattg aagctggcgg aaagttccga aggcacttac
     5281 accttggctg tcaacaatac cggcaacgaa cctgcaagcc tcgaacaatt gacggtagtg
     5341 gaagggaaag acaacaaacc gctgtccgaa aaccttaatt tcaccctgca aaacgaacac
     5401 gtcgatgccg gcgcgtggcg ttaccaactc atccgcaaag acggcgagtt ccgcctgcat
     5461 aatccggtca aagaacaaga gctttccgac aaactcggca aggcagaagc caaaaaacag
     5521 gcgggaaaag acaacgcgca aagccttgac gcgctgattg cggccgggcg cgatgccgtc
     5581 gaaaagacag aaagcgttgc cgaaccggcc cggcaggcag gcggggaaaa tgtcggcatt
     5641 atgcaggcgg aggaagagaa aaaacgggtg caggcggata aagacagcgc cttggcgaaa
     5701 cagcgcgaag cggaaaccca gccggctacc accgccttcc cccgcgcccg ccgcgcccgc
     5761 cgggatttgc cgcaaccgca gccccaaccg caacctcaac cccaaccgca gcgcgacctg
     5821 atcagccgtt atgccaatag cggtttgagt gaattttccg ccacgctcaa cagcgttttc
     5881 gccgtacagg acgaattgga ccgcgtgttt gccgaagacc gccgcaacgc cgtttggaca
     5941 agcggcatcc gggacaccaa acactaccgt tcgcaagatt tccgcgccta ccgccaacaa
     6001 accgaccttc gccaaatcgg tatgcagaaa aacctcggca gcgggcgcgt cggcatcctg
     6061 ttttcgcaca accggaccga aaacaccttc gacgacggca tcggcaactc ggcacggctt
     6121 gcccacggcg ccgttttcgg gcaatacggc atcggcaggt tcgacatcgg catcagcacg
     6181 ggcgcgggtt ttagcagcgg cagtctttca gacggcatcg gaagcaaaat ccgccgccgc
     6241 gtgctgcatt acggcattca ggcacgatac cgcgccggtt tcggcggatt cggcatcgaa
     6301 ccgcacatcg gcgcaacgcg ctatttcgtc caaaaagcgg attaccgcta cgaaaacgtc
     6361 aatatcgcca cccccggcct tgcgttcaac cgctaccgcg cgggcattaa ggcagattat
     6421 tcattcaaac cggcgcaaca catttccatc acgccttatt tgagcctgtc ctataccgat
     6481 gccgcttcgg gcaaagtccg aacgcgcgtc aataccgccg tattggctca ggatttcggc
     6541 aaaacccgca gtgcggaatg gggcgtaaac gccgaaatca aaggtttcac gctgtccctc
     6601 cacgctgccg ccgccaaagg cccgcaactg gaagcgcaac acagcgcggg catcaaatta
     6661 ggctaccgct ggtaaccgcc ggatatgccg aaaggggtct gacgatgcca ccgtgcgctg
     6721 tcaaaccctt tttctgccgc cgccttgtgc ctgctccatt gtctgataac cgtcaaattg
     6781 atttttagcc catgtttggt gggtcgggga aatctatatc ttcgtccgtg ccgaaatagt
     6841 ctgagacctt tgcaaaattc ctttccctcc cgacagccga aacccaaaca caggttttcg
     6901 tctattttcg ccccaaatac ctcctaattc tacccaaata cccccttaat cctccccgga
     6961 cacctgataa tcaggcatcc g
//
LOCUS       DAWKOX010000109         6944 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.109, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000109 DAWKOX010000000
VERSION     DAWKOX010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6944
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.109"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            74..703
                     /locus_tag="WJK78_001463"
     CDS             74..703
                     /locus_tag="WJK78_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ7598379.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            849..2510
                     /locus_tag="WJK78_001464"
     CDS             849..2510
                     /locus_tag="WJK78_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ7598380.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPTAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAVNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIGIGGGDLHTRIVWTQYGTLPHRVGDV
                     QCRYRIVLLPQNADAPQGWQTVWQGARPRNKDSKFALIRKIGENI"
     gene            2627..3232
                     /locus_tag="WJK78_001465"
     CDS             2627..3232
                     /locus_tag="WJK78_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ7598381.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEGFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            3304..3696
                     /locus_tag="WJK78_001466"
     CDS             3304..3696
                     /locus_tag="WJK78_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ7598382.1"
                     /translation="MPTSTKPYVLRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     EYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3725..3874)
                     /locus_tag="WJK78_001467"
     CDS             complement(3725..3874)
                     /locus_tag="WJK78_001467"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598383.1"
                     /translation="MPSEARIAGSDSIFNVPISNRQGQHGFNTPKQVLPINGFRLRPI
                     GQNAV"
     gene            complement(3895..4341)
                     /locus_tag="WJK78_001468"
     CDS             complement(3895..4341)
                     /locus_tag="WJK78_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ7598384.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSVKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(4473..4685)
                     /locus_tag="WJK78_001469"
     CDS             complement(4473..4685)
                     /locus_tag="WJK78_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ7598385.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(4974..6821)
                     /locus_tag="WJK78_001470"
     CDS             complement(4974..6821)
                     /locus_tag="WJK78_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ7598386.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETAGLSAS
                     VPTRPAEPEGKTLADYSSYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLKPEGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKLY
                     KQAVATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFQNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSHVGAQGLMQVMPATAREIA
                     GKIGMDAAQFYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTPL
                     EGAVYAETIPFSETRDYVKKVMTNAAYYAALFGAPHIPLKQRMGIVPAR"
BASE COUNT         1373 a         1855 c         1905 g         1811 t
ORIGIN      
        1 tggggttgaa gttgacatct acaaagttta atgtttgaat acattaaaaa aatatatttg
       61 aatgagatgt tttatgattc aaaatgttgt tacttcaata atcctgtatt ctgggacagc
      121 cgtagactta cttattatcc taatgttatt ttttgccaaa agaaaaagca gaaaagacat
      181 cattaacatc tatttaggac aatttctagg ctctgttagc ctgatattgc taagtttgct
      241 ttttgcattt gtcttagatt atattcctag taaagagatt ttaggtttgc tcggcttgat
      301 tccaattttc ctaggcatca aagttttgct gttaggagat tctgatggag aggctattgc
      361 caaagagggt ttgcgcaaag ataataaaaa cctgattttt ctagtcgcta tgattacttt
      421 tgcaagttgt ggtgctgaca atattggtgt ctttgttcca tattttacta ccttaaattt
      481 agcgaatttg atagtggctt tacttacctt tctagtcatg atttatctct tggttttttc
      541 tgcccaaaaa ttagcacaag tcccttctgt tggagaaact ttggaaaaat atagcagatg
      601 gtttgttgct gttgtttatt tgggattggg ggtatatatc ctgattgaaa acaacagttt
      661 tgatatgcta tggactgtgt cgggccagga aaaaatatta tgaaaaagat agtatctgca
      721 aagactgcca tgtgcagtct tttttgttgc cggtcttttt gtgtctgatg ccgtctgaag
      781 cagtctctgc acgacctttg tgcgaatatt tgctacactt ggcaatccgt ccatttcttc
      841 tcacgcttat gctgacctac actccgcccg atgcccgccc gcccgccaaa acccacgaaa
      901 agccgtggct gctgctgttg atggcgtttg cctggttgtg gcccggcgtg ttttcccacg
      961 atttgtggaa tcctgccgaa cctgccgtct ataccgccgt cgaagcactg gcaggcagcc
     1021 ccaccccttt ggttgcccat ctgttcggtc aaaccgattt cggcataccg cccgtgtatc
     1081 tttgggttgc cgccgcgttc aaacatttgc tgtcgccgtg ggcagccgac ccgtatgatg
     1141 ccgcacgctt tgccggcgtg tttttcgccg ttgtcggact gacttcctgc ggctttgccg
     1201 gtttcaactt tttgggcaga caccacgggc gcagcgtcgt cctgattctc atcggctgta
     1261 tcgggctgat tccagttgcc catttcctca accccactgc cgccgccttt gccgccgccg
     1321 gactggtgct gcacggttat tctttggctc gccggcgcgt gattgccgcc tcttttctgc
     1381 tcggtacggg ctggacgctg atgtcgttgg cagcagctta tccggcagca tttgccctga
     1441 tgctgccctt gcccgtactg atgtttttcc gtccgtggca aagcaggcgt ttgatgttga
     1501 cggcagtcgc ctcacttgcc tttgccctgc cgcttatgac cgtttacccg ctgctcttgg
     1561 caaaaacgca gcccgcgctg ttcgcgcaat ggctcgacga tcacgttttc ggtacgttcg
     1621 gcggcgtgcg gcacgttcag acggcattca gtttgtttta ctatctgaaa aacctgcttt
     1681 ggtttgcatt gcctgcgctg ccgctggcgg tttggacggt ttgccgcacg cgcctgtttt
     1741 cgaccgactg ggggattttg ggcattgtgt ggatgcttgc cgttttggtg ctgcttgccg
     1801 tcaatccgca gcgttttcag gataacctcg tctggctgct tccgccgctt gccctgttcg
     1861 gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc gtttgtcaac tggttcggca
     1921 ttatggcgtt cggactgttt gccgtgttcc tgtggacggg ctttttcgcc atgaattacg
     1981 gctggcccgc caagcttgcc gaacgcgccg cctacttcag cccgtattac gttcccgaca
     2041 tcgatcccat tccgatggcg gttgccgtac tgttcacacc cttgtggctg tgggcgatta
     2101 cccgcaaaaa catacgcggc aggcaggcgg ttaccaactg ggcggcaggc gttaccctga
     2161 cctgggcttt gctgatgacg ctgttcctgc cgtggctgga cgcggcgaaa agccacgcgc
     2221 cggtcgtccg gagtatggag gcatcgcttt ccccggaatt aaaacgggag ctttcagacg
     2281 gcatcgagtg tatcggcata ggcggcggcg acctgcacac gcggattgtt tggacgcagt
     2341 acggcacatt gccgcaccgc gtcggcgatg tacaatgccg ctaccgcatc gtcctcctgc
     2401 cccaaaatgc ggatgcgccg caaggctggc agacggtttg gcagggtgcg cgtccgcgca
     2461 acaaagacag taagttcgca ctgatacgga aaatcgggga aaatatataa aaaacaacag
     2521 attgagccga atttctggat taagtgccgg aaatcgcgta taattgcgcg attaaacctt
     2581 tataaatcag ccgttttaca ggcatcacac aggagcgaca attattatga tgaccctcta
     2641 ttccggcatt acctgcccct tcagccaccg ctgccgcttc gttttgtacg aaaaaggcat
     2701 ggattttgaa atcaaagacg tcgatattta caacaagccc gaagacctcg ccgtcatgaa
     2761 cccgtataac caagttcccg tgctggtcga gcgcgatttg gtgctgcacg agtccaacat
     2821 catcaacgaa tacatcgacg aacgcttccc ccatccgcag cttatgcccg gtgatcccgt
     2881 tatgcgcggc aggggccggc tggtgctgta ccgtatggaa aaagaattgt tcaaccacgt
     2941 ccaagttttg gaaaaccccg ccgccaccaa caaggaacag gcaaaagcgc gcgaagccat
     3001 cggcaacggt ctgaccatgc ttgccccttc gttcagcaaa agcaaataca tcctcggcga
     3061 aggtttttct atgattgatg tcgcccttgc tccgctgctg tggcggctcg accactacga
     3121 tgtcaaactg ggcaaaagtg ccgcgccgct gctcaaatac gccgagcgca tcttccagcg
     3181 cgaagccttt atcgaagcac tgacacccgc cgaaaaagcc atgcgcaaat aagtccgaaa
     3241 tgcttgcaaa acccaccgtt ttgcaggcat tttcctattt tggcgtacaa cacggaaccc
     3301 atcatgccca cctcaaccaa accctacgtc ctccgcgctc tctgcgaatg gtgcagcgac
     3361 aacagcctca caccgcacat ccttgtttgg gtcaacgaac acacgcgcgt ccccatgcag
     3421 tatgtccgcg acaatgaaat tatgctcaac atcggtgcga ccgccacgca aaaccttcaa
     3481 atcgacaacg attggatcag cttttccgcc cgtttcggcg gacaggcgca cgacatatgg
     3541 atacctgtcg gacacgtcct cagccttttc gcacgggaga ccggcgaagg tatggggttt
     3601 gaattggagg agtaccgccc cgacacgccg cctgaaaaca cctctgccga aaccgcgccc
     3661 cgacccgcca aaaaaggctt gaaattggtc aaataaatct atgccgtctg aacggaatcg
     3721 tgtttcagac ggcattttgt ccgatggggc gcaaacggaa tccgtttatc ggcaaaacct
     3781 gtttcggcgt attgaaaccg tgttgcccct gccgattcga tattgggaca ttgaaaatgc
     3841 tgtctgaacc tgcgatacgg gcttcagacg gcattttgtc cgatattcgg gcaatcaggc
     3901 ggtcagcacg gctttcagga ttttgttgac ttcgcccata tcggctttgc cggcaagtcg
     3961 ggttttcaat acgcccatca ctttgcccat atccgccata cctgccgcgc cggtttcggc
     4021 aacggcggca tcgaccgcag tacggatttc gccggcggag agcatttgcg gcaggtagcg
     4081 gtgcagtacc tcgatttcgg cgttttcttt gtctgccaaa tcctgacggc cggcttcagt
     4141 gtagattttc acgctgtctt tgcgctgttt gaccattttg gtcaggatgg cggtgatttt
     4201 ggcatcgtcg gcttcggtgc gttcgtccac ttcaaactgt ttgacggcgg cgttgatgag
     4261 gcggatggtg ccgagggaaa cttggtcttt ggcgcgcatc gcggttttca tgtcttcggt
     4321 aaggcggatt ttcaggctca taatgttctc gctgggatgt cggatggaaa cggcgggttt
     4381 cgatgccgtc tgaaaagcaa aacacaccgc agagcaggtc ttgcggtgtg tcctcatatc
     4441 acagggctga cctgtaatct gtacttgaac gtttagtaca ttttgggcgg cagttgttgg
     4501 ctgcgcaggc gtttttgcag gcgttttacg gctgccgctt ttttgcgttt gcgttcggta
     4561 gtcggttttt cgtaggcttc gcgggcgcgc agctcggtca gcaggccggt tttttctacg
     4621 gcgcgtttga aacggcgcat agcgacttca aagggttcgt tttcttttac gcggattgca
     4681 ggcattttat ttcctttaat aaattctgtt gttgcatctg cccatcatat cggtggaaag
     4741 ggtagggcag acggtgttga aggtttaccg tatcgctgtg ccttgcggcg gcgggatacg
     4801 cgccgtgacg gaaacatcac ctcctaacgg gtcggcttgt gccgtgtcaa gctgcttgaa
     4861 aaagcaggaa aaacaatttt cggattgtct tatatttatg gttcgccgtc aatgccgttc
     4921 gggataaaaa tgccgtctga aagaccgggc gggtttcaga cggcatcggt acgtcagcgt
     4981 gcaggaacaa tgcccatacg ctgtttgagc gggatgtgcg gcgcgccgaa gagggcggcg
     5041 tagtaggcgg cattggtcat cacttttttg acatagtcgc gcgtttcgga aaacgggatg
     5101 gtttcggcat ataccgcgcc ttcgaggggc gtgtccgcct gccatcggcg cgccctgccg
     5161 ggaccggcgt tatagcctgc ggtggcgagg acttcgttgt tttgcaggcg gcgtttggtg
     5221 tccgccatat accacgtccc catacggata ttgccgtcgg cggtgtaaaa ttgtgcggca
     5281 tccataccga ttttgccggc gatttcgcgc gcggtggcag gcataacctg catcagcccc
     5341 tgcgcgccta cgtgggattg cgcgcctata acgaagcggc tttcctgacg aatcagaccg
     5401 taaacccaag ccggatcgac attaacattt tgcgcgtggc ggattaccgt gtctttaaac
     5461 ggcgaaatat agcgcaaggt gtagttgagt ttgcggtcgg tgcgttccgc gctgttgacc
     5521 gccatatcgt aaaaaccgtg gtcgaacgcg gtttgcgcgg cggtcagcag cttgtcttcg
     5581 tcaaagccgc gtgtggcaaa acgccattcc gcctgagcct gacggcgcat tttcgcatcg
     5641 ccggcggttc ggctgttttg gaacagtacc agcgcgcgct taatcgcgcc gtcttccgcc
     5701 atacggagga cgctgttttt gccggcatcg ggaacattgt tgcgcgtatc gattttgcgc
     5761 cccaactctt cccctgccag tacggcataa aaattcctgc ccgtcgctac cgcctgtttg
     5821 tagagttttt ccgcctcttg cgtgttgccc gttgcggcgc ggctgcgtgc cagccagtag
     5881 agccaggtcg ggcttttttg cagtttttcg ggcatatgcg agattacgga agccagctcg
     5941 tcccaacgtc gggcgcgcaa ggcggcgcgg gcgtaccact cgatttggtc gtcggtcagt
     6001 tggcggcggt cggcaacctt gccgtaatag tccaaggcgg caggcacatt gaggttttgc
     6061 gactgataat gccccaatac gccccacgcg aaactgcgtt gttcgaggct taaaccgctt
     6121 tccatttcgg acagcagggc ggcggcattc ggcgatttgc gtgcttcttt gccgatgacg
     6181 ttcaacaggg catattcgcg cgaaccttgt gtaccgccgt caaacgggct gcccaatgcg
     6241 gcggcaaggt tgcgtgcgtc tgtggtttgg cggccggcca gcagtccgcg cacgcgcctc
     6301 caggcgtcgt tgccgtccaa caagccggat gcggctgcct gttccaacag tttggtgcag
     6361 cccgaaggca gtttgcccgt atttttgacc agttcggcgg cacgcgtata gtcgttgcgg
     6421 ctcgaatcgg cgtagcattc gacttcttgg gcgcgccctt caggtttgag tttggcatat
     6481 tcctgtgcaa acagcgtcca ctgtctgcgt gcgcccaaag acttcagcca ctcgttgcgg
     6541 acattttccg ccatcgcgct gtcgccggcg ttttccaaat aggcggcgac ggcggcatcg
     6601 tttttctgtt tcactgcatc cagtgcggaa gggtagctgc tgtaatctgc cagcgttttt
     6661 ccttcgggtt cggcagggcg ggtgggaacg cttgccgaaa gaccggcagt ttctatattg
     6721 tctgccaggg tcttgctgct gggcgcgtgt gtcgaagaac acgcggcaag caccagggcc
     6781 gccagcagcg gcagggaatg cttcatagag ggtaggtaca tcggatttcc ttaagaatcg
     6841 gaaccctgaa cggtcagggt tggaaaagac aaaatgccgt ctgaacaggc gtttgcccga
     6901 attatatgcc gaaactgcac cgcctttgga atgtttccga cata
//
LOCUS       DAWKOX010000110         6885 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.110, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000110 DAWKOX010000000
VERSION     DAWKOX010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6885
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.110"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(190..468)
                     /locus_tag="WJK78_001471"
     CDS             complement(190..468)
                     /locus_tag="WJK78_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598387.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
     gene            complement(475..759)
                     /locus_tag="WJK78_001472"
     CDS             complement(475..759)
                     /locus_tag="WJK78_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598388.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAAPL
                     ALAAHANATLPDTAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            complement(767..964)
                     /locus_tag="WJK78_001473"
     CDS             complement(767..964)
                     /locus_tag="WJK78_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598389.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            complement(969..1259)
                     /locus_tag="WJK78_001474"
     CDS             complement(969..1259)
                     /locus_tag="WJK78_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598390.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQPVKKG"
     gene            complement(1304..2647)
                     /locus_tag="WJK78_001475"
     CDS             complement(1304..2647)
                     /locus_tag="WJK78_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ7598391.1"
                     /translation="MEDKQGMTKAVVGVMTDALADGRKPATASNLPPLSNRGGTETET
                     AGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVRVS
                     LLEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDVLYGRVHFGGQNN
                     TILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRN
                     KGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKT
                     STWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFVQKATRIHAVKEDKVISAD
                     RYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQA
                     IHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
     gene            complement(2732..2947)
                     /locus_tag="WJK78_001476"
     CDS             complement(2732..2947)
                     /locus_tag="WJK78_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598392.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYIFRP"
     gene            complement(3235..3588)
                     /locus_tag="WJK78_001477"
     CDS             complement(3235..3588)
                     /locus_tag="WJK78_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598393.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            3824..5251
                     /locus_tag="WJK78_001478"
     CDS             3824..5251
                     /locus_tag="WJK78_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ7598394.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            5320..6723
                     /locus_tag="WJK78_001479"
     CDS             5320..6723
                     /locus_tag="WJK78_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ7598395.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
BASE COUNT         1715 a         1654 c         1730 g         1786 t
ORIGIN      
        1 ttgctagacg gctgatattt ataaagtgcc aactgcgcct gagtgataaa cggcttgttc
       61 atggttctgc ctttcaatga ttgttttgaa agcctgattt tgacaccata acttcatgcg
      121 ctcaattctt aaacagaacc gccccgatta atacgggtac ggaaacgccg agataaaaat
      181 aaaaatccat catttcaaaa cctttttcag cagggaaaca aagtaaacgg acgcgaggat
      241 gccgaatact atccaacctg tttcaagacc gctttgcagg ttgtctttcg gactgcattc
      301 cgccaataaa agccttagcg gctgaccgtc cgacatcttc cacaggctgc cgttatattc
      361 cggcctgaca atctgtccgt tttctttgat tcttggtact accaagctga aataaaggtt
      421 ttcagcctgg tgcttctcaa gacatttatt tccgacttgg tagtacatgc cgtcttactt
      481 catcactctc ttaacgatgg aaaacacaaa aagcgcggcg aaaacgccaa cgacaatcca
      541 accggcttcc ataccgtccg cttttgcggc ttccaaagcg ttttttgccg tatcgggcaa
      601 cgttgcattt gcatgtgcgg ccaaagccag gggagcagct gttacaacag ccagttttgc
      661 gccgtattta cggcaggtgt taataaattt catgatattt tcctttaaaa agtgtttggc
      721 ggtaatggat ggagcgtttt tcagacgacc gccgaacatc cgaaaatcag tctttcaaaa
      781 atccgaatac gacaaattcg tattggttgc cgatttcttc caaacctgcg ttaatcgctt
      841 cttcgaagtc gtagaaataa tcggcattgg tgattaattt ggtatgtccg atgtcgcccg
      901 tttcaggaga gagatacaga aagtcccctg ttgatacgga ctggacaaca tagactttct
      961 gcattcaatc agcctttctt aacgggttga aaaccgatga ctttcagttt ttgggttttg
     1021 cccgtagtga cgatttctac gttcaggttt gcttcgatcg gaaattgggc gtttcggaac
     1081 tgctcgaaat tggcagagcc gccgaaatcg tattcagtag tagagctgcc caatgcgttg
     1141 ccttgggagc tgtctaaggg tgtggcgaca atcaggcggc aatagtcgaa gctcttgcct
     1201 tcgatttgtc cgttgaattt tttaacgccg acgatgtggc cttgaagttg gatgttcatt
     1261 ttttggtttc cttgtgtgat taaacgtctt tcgggcagac actttaagcc catgaaatcg
     1321 gtagtcttgc gaatttgtcg taaatgaagt tgttatagct ttcttcattg ttgacgtgtt
     1381 tttgctgttc aagctgtttt tcaagattct cgtaatattc gtacatatag taagggtctt
     1441 tgtacggttt gaatgcgggc tgttcatgaa tggcttgagc tttcaaaaag gcgcagtcgt
     1501 aggcttcggg agccaaagac ttgggcagct tgtgatgact cggctcaatc agttcaaaca
     1561 gtttggcttt gtccaattcg ggaaaaatga atttcagacc gtttgccgca cgtccaaact
     1621 gtttttttac ccattcaagg tagcggtcgg ctgaaatgac cttatcttcc ttaaccgcgt
     1681 gtatgcgcgt tgccttttgg acgaatcgtt cgcaaatcgg atatgcgccg ccgaaatatt
     1741 cgcccggatt ctgcaaaact tcaaaaggga taacgatgtc ttttgctttg aattcaattt
     1801 caaagcgcgt ccatgtgctt gttttatcgc ccaactgctt gcctttttca tagacgcgga
     1861 catatttgga cgattcacgg gagccgatac cataggtctt gcctttggtc attttggctt
     1921 catcgtcttc ttcccaatct gaccccaaac attcgccttt tggtttgacg tgatgacagg
     1981 taaacatacc tttatttcgg tcttcacggg cttggttcgg gctgtattcg ccgttgaaaa
     2041 agtcttttgc gatgtcaacg cgtgtgattt ttgggcggat tgcattagtc aggaatgcga
     2101 aaagtcgtga ttcccagcct tcttttgcga cgccgcaacc ggtgccggtc agttcgaaaa
     2161 ggatggtatt gttttgtccg ccaaaatgga cgcgaccgta taggacgtct tccgaaccca
     2221 tcaaccaaca gcgctcataa aaacgaccgc ccgagccttt ggactctttg tagataccga
     2281 aaccgaaaac ttcttcggcg agcatggacg cggcgcgaat gaaatcttcg tcttccaaaa
     2341 gacttacacg aacgccgtat ttatcgaaaa aggttttttc atgaaatgaa aagctaattt
     2401 gatcaatgaa agccgaatct gatacaccgc gccgaagagg aacgcctaac aggtttcctt
     2461 taccgtccgt tatgtacgtt tcgtaacatt cgaagacttc ctgaaccctg cctgccgttt
     2521 cggtttctgt accccccctg ttagataagg ggggaagatt tgaagcggtt gccggcttcc
     2581 tgccgtccgc taacgcgtcc gtcatcacgc cgacaaccgc ctttgtcatc ccttgcttat
     2641 cttccatggt gcgaatcctc aaaaacgggc aaaaaaaagc cctgttactt gtagaaagta
     2701 aagggcgtta atttttgtta atcgtccctt cttagggacg aaatatataa ggttttaaaa
     2761 cgctaagaac aaaatccgat aacggctctg aagaagtaag tctttcttta ttgcacaaga
     2821 tagcaaactt ccacggcatt ctcgccccac ccgtgccgtc caagcctttt tcaaagacat
     2881 agatggtttt cttggcaatc acttcgtcag tttggcggtc gataatccgt atggtcgcac
     2941 ctgccaccca gtgcctgcgc agcttggaat cgacattgtt ttcgaacgtt accgcataac
     3001 gggcggggtg tatatgatta agtatttgat ttatcggaaa atctttacct gaataccgaa
     3061 taatatcgga atggttgggt tgcaggacat ccacatagcg gtattcccca tcgctaaaaa
     3121 atcctaggaa acgagcaata aaatttacgc cttcgctggt ctgtaaagcc gcattgtccc
     3181 acatcgggtc tctggttttt gcatctgccg aaacggtacg ctcaggtact accttcaaca
     3241 gcataatccc ttccacattg tccgccgtct ggtaaatctt tcccccgccg ttttgcattg
     3301 ttcgttaaac acggcttcgg cttctttgta ttttctgtcc cactcttctt gtgcctgtat
     3361 ttcttctttg atcgggccga attgtttggg aataatccaa acaaacagca tcaggatagc
     3421 ggcggcggtc aggctgcctg aaaggatttt gccggggttc cgtttgggct ttttataggc
     3481 aaagcggacg agaaaccaaa gcaacagcag catggtgccc caatagccga ttgagaatag
     3541 gatggccaaa ccttctagga aatggcgtaa atcgtttgtg gtaaacatgg gttgttcctg
     3601 tggttaaatg tgcaggctgc tttttgccga accttgccgc atctcaaaag cagcctgcgc
     3661 ttcagcgttg cgttacgcag taaaataatg aatatttgta acgacttggg tattttttgt
     3721 caatattccc gcctttccct taacagctgc cgcgctttcc gttaaaattc ctttacatat
     3781 ttatattgtt tcctgtttct atattgccaa ggttataccc gttatgtttt tctccgccct
     3841 gaaatccttt ctttctcgat acattactgt atggcgcaat gtttgggcgg tgcgcgacca
     3901 gttggaaccg cccaaacgca cggcggaaga acaggcgttt ttgcccgcgc atttggaact
     3961 gaccgatacg ccggtctctg ccgctccgaa atgggcggcg cgttttatta tggcgtttgc
     4021 gcttttggct ttgttgtggt cctggttcgg caaaatcgat attgtggcgg cggcttcggg
     4081 caaaacggtg tcgggcgggc gcagcaaaac catccagccg ctggaaacgg cggtggttaa
     4141 ggcggtacat gtgcgcgacg ggcagcatgt gaaacaggga gaaacgctgg cggaactgga
     4201 ggctgtggga acagacagcg atgtggtgca gtcggagcag gctttgcagg ctgcccaatt
     4261 gtccaaactg cgttatgaag cggtattggc ggcattggaa agccgtaccg tgccgcatat
     4321 cgatatggcg caagcacggt ctttaggtct ctccgatgcc gatgtgcaat cggcgcaggt
     4381 gttggcgcag caccagtatc aggcatgggc ggcgcaggat gcgcaattgc agtcggcttt
     4441 gcgcggccat caggcggaat tgcagtcggc caaggcgcag gagcagaagc tggtttcggt
     4501 gggggcgatc gagcagcaga aaacagcaga ctaccgccgt ttgcgggccg acaattttat
     4561 ttcggaacat gcgtttttgg agcagcagag caaatcggtc agcaattgga acgatttgga
     4621 aagtacgcgc ggtcagatga ggcagattca ggcggccatt gcacaggcgg agcagagtcg
     4681 ggtgctgaat acgcagaacc tgaaacgcga tacgctggat gcgctgcgcc aggcaaacga
     4741 acagattgac caataccgcg gccaaacgga taaggcaaag cagcggcagc agctgatgac
     4801 aatacagtcg cctgcggacg gcacggtgca ggaattggcc acctatacgg tgggcggtgt
     4861 ggtgcaggct gcccaaaaaa tgatggtggt tgcgcccgat gacgacaaaa tggacgtgga
     4921 agttttggta ttgaacaaag acatcggttt tgtggaacag ggacaggatg cggtggtgaa
     4981 gattgagagt tttccctata cgcgctacgg ttatctgacg ggcaaggtga aaagtgtcag
     5041 ccatgatgcg gtaagccacg aacagttggg cttggtttat acggcggtgg tgtcgctgga
     5101 caaacatacc ttgaatattg acggcaaagc agtgaatctg acggcgggca tgaatgtcac
     5161 ggcggagatt aaaacgggta aacggcgggt gctggattat ctgttaagcc cgctgcaaac
     5221 caaattggac gaaagcttta gggagcgata ggcggatccg tactgggcat ttgttatccg
     5281 ccggttcgga catgcagact gcctgaaacc attgcccgga tgacattgct caatctaatg
     5341 ataatgcaag attacggtat ttccgtttgc ctgacactga cgccctattt gcaacatgaa
     5401 ctattttcgg ctatgaaatc ctatttttcc aaatatatcc tacccgtttc actttttacc
     5461 ttgccactat ccctttcccc atccgtttcg gcttttacgc tgcctgaagc atggcgggcg
     5521 gcgcagcaac attcggctga ttttcaagcg tcccattacc agcgtgatgc agtgcgcgca
     5581 cggcaacaac aagccaaggc cgcattcctt ccccatgtat ccgccaatgc cagctaccag
     5641 cgccagccgc catcgatttc ttccacccgc gaaacacagg gatggagcgt gcaggtggga
     5701 caaaccttat ttgacgctgc caaatttgca caataccgcc aaagcaggtt cgatacgcag
     5761 gctgcagaac agcgtttcga tgcggcacgc gaagaattgc tgttgaaagt tgccgaaagt
     5821 tatttcaacg ttttactcag ccgagacacc gttgccgccc atgcggcgga aaaagaggct
     5881 tatgcccagc aggtaaggca ggcgcaggct ttattcaata aaggtgctgc caccgcgctg
     5941 gatattcacg aagccaaagc cggttacgac aatgccctgg cccaagaaat cgccgtattg
     6001 gctgagaaac aaacctatga aaaccagttg aacgactaca ccgacctgga tagcaaacaa
     6061 atcgaggcca tagataccgc caacctgttg gcacgctatc tgcccaagct ggaacgttac
     6121 agtctggatg aatggcagcg cattgcctta tccaacaatc atgaataccg gatgcagcag
     6181 cttgccctgc aaagcagcgg acaggcgctt cgggcagcac agaacagccg ctatcccacc
     6241 gtttctgccc atgtcggcta tcagaataac ctctacactt catctgcgca gaataatgac
     6301 taccactatc ggggcaaagg gatgagcgtc ggcgtacagt tgaatttgcc gctttatacc
     6361 ggcggagaat tgtcgggcaa aatccatgaa gccgaagcgc aatacggggc cgccgaagca
     6421 cagctgaccg caaccgagcg gcacatcaaa ctcgccgtac gccaggctta taccgaaagc
     6481 ggtgcggcgc gttaccaaat catggcgcaa gaacgggttt tggaaagcag ccgtttgaaa
     6541 ctgaaatcga ccgaaaccgg ccaacaatac ggcatccgca accggctgga agtaatacgg
     6601 gcgcggcagg aagtcgccca agcagaacag aaactggctc aagcacggta taaattcatg
     6661 ctggcttatt tgcgcttggt gaaagagagc gggttagggt tggaaacggt atttgcggaa
     6721 taaagcaggc tgaaacggtt atgaaattcc caaagcagcc tgcaccccgt ttcgaaagtg
     6781 caggctgctt tgggattgat ccgatacttt cacattctca ttgcctttaa ataaagcaca
     6841 gttaaaaaca catttaaatt aagtgcgaat taattcaaat gtata
//
LOCUS       DAWKOX010000111         6882 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.111, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000111 DAWKOX010000000
VERSION     DAWKOX010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6882
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.111"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..98
                     /locus_tag="WJK78_001480"
     CDS             <1..98
                     /locus_tag="WJK78_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HEZ7598396.1"
                     /translation="AETISNKLFFTHHPKRQTEFAVRQIRQARAE"
     gene            224..1519
                     /gene="hisS"
                     /locus_tag="WJK78_001481"
     CDS             224..1519
                     /gene="hisS"
                     /locus_tag="WJK78_001481"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ7598397.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGKRADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            1520..2149
                     /locus_tag="WJK78_001482"
     CDS             1520..2149
                     /locus_tag="WJK78_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ7598398.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFS
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            2303..3760
                     /gene="der"
                     /locus_tag="WJK78_001483"
     CDS             2303..3760
                     /gene="der"
                     /locus_tag="WJK78_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ7598399.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEKEEEEAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            3791..4690
                     /gene="rdgC"
                     /locus_tag="WJK78_001484"
     CDS             3791..4690
                     /gene="rdgC"
                     /locus_tag="WJK78_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ7598400.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLEWFSEGF
                     AAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAASLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            4742..5158
                     /locus_tag="WJK78_001485"
     CDS             4742..5158
                     /locus_tag="WJK78_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598401.1"
                     /translation="MLKHLAFLLPAMMFALPAASAVLTSYQEPGCTYDGGVGKDRLPS
                     GKGIWRCRDGRGYTGSFKNGKFDGQGVYTVAANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIKEVKLPKNK"
     gene            5224..5790
                     /locus_tag="WJK78_001486"
     CDS             5224..5790
                     /locus_tag="WJK78_001486"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ7598402.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEICETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(5854..6558)
                     /locus_tag="WJK78_001487"
     CDS             complement(5854..6558)
                     /locus_tag="WJK78_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ7598403.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEAVQDTMSA
                     RLQVAAEGRDKNAVNAEFVKKFNKFIRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDELNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAILRFK
                     ARADKLSGILGTSGYKIVKLNLGHIGSHIAGEGAAQAKMLRAMPMAASYGVEGTDSAA
                     PGVEEISISVNGTVQF"
BASE COUNT         1839 a         1870 c         1654 g         1519 t
ORIGIN      
        1 aagccgagac aatttcaaat aaattgtttt tcacacatca tcccaagcgg cagacagagt
       61 ttgcagtccg acaaatcagg caagcacgtg cagagtaagt caaatgccgt ctgaaaactg
      121 tttcagacgg cattttaccc gtccgcaaac cacccccaac ctcacaaacc cttaaaaatc
      181 cgctataatc gcccgcaatt tgatttaagc attcttactt gaaatggcac aaaaaatcca
      241 atccgtcaaa ggcatgaacg accttctgcc tgtcgagcaa aaagatttca aactgacggc
      301 tgcgttttgg caggcgtttg aggatacggt aaaccgctgg acgcgcgctt acggctatca
      361 gcaaatccgt acgccgattg tcgagcaaac cggtttgttt gtccgctcca tcggcgagga
      421 aaccgatgtg gtcggcaagg aaatgtacac cttttccgat tcaaacgatt ctttgagttt
      481 gagcctgcgt ccggaaggta cggcttcttg tctgcgtgcg gtggtcgaac acaaccttct
      541 gtacaacagc ccgcaaaagc tgtggtatat ggggccgatg ttccgccgcg agcgtccgca
      601 aaaaggccgt tatcgtcaat tccatcaggt cggtatcgag gctttgggtt ttgaagggcc
      661 ggatatcgat gcggaaatca tcgcgatgtc tgccgacttg tgggaaaaat tgggtatccg
      721 cgaatacctg actttggaaa tcaacagctt aggcaaccgt gaggagcgag cggcacaccg
      781 tgcggcgttg gttgaatatt tgacacgcta tgaagataaa ttggacgaag acagcaaacg
      841 ccgtctgaaa accaatcctt tgcgtgtttt agatacgaaa aaccctgatt tgcaggaaat
      901 ctgcaacgcc gcgccgcgtt tggtggatta tttgggcgag gcttcgcaaa accactatgc
      961 acgcttcaag gcgatgttgg acggtttggg tatccaatat attgaaaatc cgcgcttggt
     1021 tcgcggtttg gattattaca atcagacggt ttttgagtgg acgaccgaca aactcggcgc
     1081 gcaggcaact gtgtgcggcg gcggccgtta cgatggtttg attgaggaac ttggcggcaa
     1141 acctgcgccg tccatcggct ttgcgatggg catcgaacgg ctgctgcttt tggtgagcga
     1201 atacggctcg ctggaagtga acgctgcgcc tgatgtctat gcaatgcacc aaggcaaaag
     1261 ggcggacttg caggtgatga aatacgcgca agccttgcgc gcgcaaggtt tcaatgtaat
     1321 gcagcattcc ggctatcaaa gcctgaaagc gcaaatgaaa aaagccgaca acagcggtgc
     1381 gcgctttgcc ctgattgtcg cgcaagacga actggcgaac ggtacggtta cgctcaaaga
     1441 catgaacggc gcacacggtc agcaaactgt cgccgccgag gatttaaccc atactttaca
     1501 acaatggaag aacgcataaa tggcagccca tctcgaagaa caacaagagt tagacaactt
     1561 taaatatttt tggaaaacca cgggcaaatg gctgtttgcc ctgctgattt tggcagcact
     1621 cggctacttg ggatacacgg tttaccaaaa ccgtgcggct tcccaaaatc aggaagcggc
     1681 ggcggtgctg gcaaacatcg tggaaaaggc gcaaaacaaa gccccgcaaa gcgaaattaa
     1741 tgccgaattg accaaactcc aacaaagcta cccgcattct atttccgccg cccaagccac
     1801 gctgatggcg gcggcaaccg aatttgacgc gcagcgttac gatgttgccg aaggccattt
     1861 gaaatgggtg ttgtccaacc aaaaagacag cctgattcaa gcgttggcgg cgcagcgtct
     1921 gggcgttgtg ttgttgcaac aaaaaaaata cgatgccgcg cttgccgcgc tcgacacgcc
     1981 ggttgaagcg gacttctccc ccctgctgat ggaaaccaaa ggcgatgtct atgccgcaca
     2041 gggaaaaagc caggaagcct taaaaaacta cggtcaggct ttagaaaaaa tgcctcaaga
     2101 ttctgtcggt cgtgaattgg ttcaaatgaa actcgattcg ctgaaataaa tgccgtctga
     2161 aatgccgtcc attatttatc agacggcatt ttaccctccc tctttatggc ctcttgccgt
     2221 gaagaaccta tttaccgtgt ccaacggaca cctgctcgtg ttcagttctc ccgaacggca
     2281 cttgacacag aaagactcaa tcatgaaacc aaccatcgcg cttgtcggcc gccccaacgt
     2341 cggcaaatct actttattca accgtttgac gcgcaccaaa gacgcactcg tacacgacct
     2401 gcccggcctg acccgcgacc gccattacgg acacggcaaa gtcggcagca aaccttattt
     2461 ggtcatcgat accggcggtt tcgagccggt tgtggacagc ggcattttgc acgaaatggc
     2521 aaaacaaacc ttacaggctg tcgatgaagc cgatgcggtt gtgtttttgg tggacggccg
     2581 taccggtctg acgccgcaag ataaaatcat tgccgaccgt ttgcgccaaa gcccgcgccc
     2641 cgtttatttg gccgtgaata aaggagaagg cggcaataga gccgtgcttg ccgccgagtt
     2701 ctacgaactt gctttgggcg acccttatgt tatttcaggt gcgcacggtg acggcgtgta
     2761 ttatctgatt gaagatattt tggaaacctt ccctgagcct gaaaaagaag aggaagaggc
     2821 gaaacatcct gtttttgccg ttatcggtcg tccaaatgtc ggtaaatcaa ccttggtaaa
     2881 cgccattctc ggcgaagagc gcgtcatcgc cttcgatatg gcaggtacga cgcgcgacag
     2941 tatccatatc gatttcgagc gcgaaggcaa accgtttacc atcatcgata ccgcaggtgt
     3001 gcgccgtcgc ggcaaagtgg atgaagcagt ggaaaaattc tccgttatca aagcgatgca
     3061 ggcggttgaa gcggcaaacg tcgctgtttt ggtattggac gcgcagcagg acatcgccga
     3121 ccaagatgcg acgattgcag gtttcgcttt ggaggcaggc cgtgctttgg tggtggcggt
     3181 caataaatgg gacggcatca gcgaagaacg tcgcgagcaa gtgaaacgcg atatcaaccg
     3241 caaactgtat ttcctcgatt ttgccaagtt ccactttatt tccgcattga aagagcgcgg
     3301 tatagacggt ttgtttgaca gcattcaggc tgcctacaac gcggcgatga ttaagatgcc
     3361 gacgccgaaa atcacgcgcg tattacaaag cgcgatcgag cgtcagcaac cgccgcgtgc
     3421 cggcttggtg cgtccgaaaa tgcgttatgc ccaccaaggc ggcatgaacc ctcccgtaat
     3481 tgtggtacac ggcaattcgc tgcacgcgat ttccgacagc tatacgcgct atctgaccca
     3541 aacgttccgc aaagccttca atctgcaagg cacgccgctc agaattcaat acaatgtttc
     3601 ggaaaacccg tatgaaaatg cggaagacaa accgaagaaa aaaccgctgc gccgcgtcag
     3661 cctgagcaac cgtattgaga aacgcgaagg ccgcaaagaa gagaaaaacc gcttcaagaa
     3721 gaaaaccaaa gtcagtgtga aaaaacaatt cagcaaataa ttcccgacat ttcaaacaat
     3781 aggaaacatt atgtggttca agcagattag tttttatccg ctcaacaaag aaaagctgcc
     3841 tgaggcagac gtacttgccg acaaacttgc tgaagctgaa tttacccatt gccaaggctt
     3901 agagtggttc agcgaaggct ttgccgcacc ggtttcgttc tctcccgaac tcgttttccc
     3961 tgccgacttt accttgcgcg tcgccctgaa aaaagaagaa aaagtcctgc ctgccggcgt
     4021 catccgcgat attttggaag agaaggtggc ggaaatccaa aacaatgaag cccgcaatgt
     4081 cggtcgcaaa gaaaaacaag agcttaaaga gcaaattaca gacgacctgc tgccccgagc
     4141 gtttacccgc agcagccgta cagaagcggt gtttaacacc cgccacggct acctgctcgt
     4201 caataacgcg gcttccgcca aagcagaaaa catcctgacc aagctgcgcg aagctttggg
     4261 cggtttggaa gcctcgctgc cgaataccaa acaatcgccc tcttctctga tgaccggctg
     4321 gctgttgcaa gggcattgcg aaggcggttt tgaattggac agcgattgcg aactcaaagg
     4381 tacgggcgat attgttcccg tcgtcaaagt atccaaacaa gatttaaccg ccgacgaagt
     4441 ggttcaacac gtcaaaaacg gtaaaaccgt aacccagctc ggtttggttt ggcgcgaaca
     4501 aatcgccttt atcctcactc aagacttcac actcaagcgc atccaatacc tcgacgtatt
     4561 gcaggaagaa gccgaaagca acggcgacga tgccgccagc cttgccttcg cctcgcaaat
     4621 cctgatggct gaatccgtca gcaccatgtt ggaagagctg gtttcctatt tgggcggctg
     4681 gcaagattga tttttcagac ggcttttata ccgtcagcca aaatccaatg gaataaccct
     4741 tatgcttaaa catctcgcat tcctactgcc cgccatgatg ttcgccctcc ccgccgcgtc
     4801 cgccgttctg acttcctatc aagaacccgg ctgcacctac gacggcggag tcggaaaaga
     4861 caggcttcct tcaggcaaag gcatatggcg ttgccgggac gggcgcggtt ataccggttc
     4921 gtttaaaaat ggcaaattcg acggacaagg cgtttatacc gttgccgcca accgcgaaat
     4981 atttatcgaa ccgttcaatt ccgacagtac caaattccgc aacatggtac tctcgggcac
     5041 gttcaaaaaa ggcttggcac acggcagatt taccgtctcg caaaacggcg aaaccctctt
     5101 cattatgaaa tgcgaaaacg gcatgattaa agaagtgaag ctgcccaaaa acaaataagc
     5161 cccgttttca gacggcatcc cccaatgctt tgtccgaaca ctgcaagaaa caaggaaaac
     5221 attatgagca tcaagtccga caaatggata cgccgcatga gcgaagaatt cggcatgatc
     5281 gaccctttcg agccgaacca aatcaaagaa gccgacggca aacgcatcat ctcctacggt
     5341 acgtccagct acggctacga catccgctgc gccaacgaat ttaaaatctt caccaacatc
     5401 aacagcacca tcgtcgatcc caaaaacttc gacccaaaaa acttcgttac cgttgaagac
     5461 gactgctgca tcatcccgcc taattccttc gcactggcgc gcacggtcga atatttccgc
     5521 atcccgcgca acgtcctgac cgtctgcttg ggcaaatcca cctacgcccg ctgcggcatc
     5581 atcgtcaacg ttaccccgtt cgaaccggaa tgggaaggct acgttaccct cgaattttcc
     5641 aacaccaccc ccctgcccgc caaaatctac gccggcgaag gcgtggcgca agtcctcttc
     5701 ttcgagagcg acgaaatctg cgaaacctca tacaaagacc gcaacggcaa atacatggga
     5761 caaaccggcg taaccctgcc caaagcctga aatataaatg ccgtctgaac ccttatcgtc
     5821 gggtttcaga cggcatttgc cgttcacctc aaatcagaac tgaaccgtcc cattgacgct
     5881 gatgctgatt tcctccacac ccggcgcggc ggaatccgta ccctccacgc cgtaacttgc
     5941 cgccatcggc atggcacgaa gcatttttgc ctgagcagct ccttcacccg cgatatggct
     6001 gccgatgtgt cccaaattta atttgacgat tttataaccg gacgtaccca atatgcccga
     6061 caacttgtct gcacgcgcct tgaaacgcaa aatagcatct ttactgacct gatcgatgac
     6121 ctcgtttcgg cgttcgcgcg acacatggaa atccgtatat tccaatgcgg catctgcctg
     6181 aacatcggca ataaaacggt ttaactcatc aaaatccctc ccttcgacct taaattccgc
     6241 acgctcctcc caacctgttt gaatgcgtct gccgttggta tattgatagc gcggcatcgc
     6301 actgcgcgat accaattcgg ttttaaagct accatttttc gattttctga tgaacttgtt
     6361 gaatttttta acaaactcgg cattgacggc atttttgtcc cgtccttccg ccgccacctg
     6421 taaacgcgcg gacattgtat cctgaaccgc ctcgacaccg gccgattcgg aaaattcgac
     6481 aatattgtaa ttcaatgctt cagccgctgc cggaaaagat accgccaata gggaagccgc
     6541 caaaatagaa cgcagcatat ccgtatcctt acttataaaa ccgccaatct agcatatcgg
     6601 cgcgctaaat tgcgttagcg taaggcaaca atttaaatat tcggtctgcg tctgtcttat
     6661 aataaccgcc tttccgatac ggaatcccac tatgcccaaa cccttgcacg tcctcgtcat
     6721 cccctcatgg tatccgcaat ccgaacagga tgtggacggg atttttttca aaatcaggca
     6781 ctggcattgc agaggaaagg catcaaaacc gccgtgcttg caccgatgtt ccgctacttg
     6841 cggaaagaaa cagcaagcat cctgaccgac cttacggttt tg
//
LOCUS       DAWKOX010000112         6744 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.112, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000112 DAWKOX010000000
VERSION     DAWKOX010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6744
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.112"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(113..472)
                     /gene="rplT"
                     /locus_tag="WJK78_001488"
     CDS             complement(113..472)
                     /gene="rplT"
                     /locus_tag="WJK78_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ7598404.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(485..682)
                     /gene="rpmI"
                     /locus_tag="WJK78_001489"
     CDS             complement(485..682)
                     /gene="rpmI"
                     /locus_tag="WJK78_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ7598405.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(829..1350)
                     /gene="infC"
                     /locus_tag="WJK78_001490"
     CDS             complement(829..1350)
                     /gene="infC"
                     /locus_tag="WJK78_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ7598406.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(1368..3281)
                     /gene="thrS"
                     /locus_tag="WJK78_001491"
     CDS             complement(1368..3281)
                     /gene="thrS"
                     /locus_tag="WJK78_001491"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ7598407.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLGAEYVTENNDRSRPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(3335..3411)
                     /locus_tag="WJK78_001492"
     tRNA            complement(3335..3411)
                     /locus_tag="WJK78_001492"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3375..3377),aa:Val,seq:gac)
     gene            3590..4705
                     /gene="tgt"
                     /locus_tag="WJK78_001493"
     CDS             3590..4705
                     /gene="tgt"
                     /locus_tag="WJK78_001493"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ7598408.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLKGLEELDFPGLAIGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            4787..5797
                     /locus_tag="WJK78_001494"
     CDS             4787..5797
                     /locus_tag="WJK78_001494"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ7598409.1"
                     /translation="MLPFFPEPSLSYTQQNRTAVLLLNLGTPDAPTAQAVRPYLKSFL
                     TDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYEKIWFKEGSPLEVYTARQAAALAER
                     MPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLVIPMYPQYAASSSGAAVDKVCEQLL
                     LQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAEHGRGKKLMLSFHGVPQKHYDLGDP
                     YPDECRHTAKLLAEALELTEDQYVVSFQSQFGRAKWVTPSTQDLFGKLPKQGVTELDV
                     FCPGFLADCLETMEEIALMGREQFYEAGGKSYRYIPCLNDNPDWIDALVALAEENLGG
                     WR"
     gene            5989..6390
                     /locus_tag="WJK78_001495"
     CDS             5989..6390
                     /locus_tag="WJK78_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ7598410.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(6453..6743)
                     /locus_tag="WJK78_001496"
     CDS             complement(6453..6743)
                     /locus_tag="WJK78_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598411.1"
                     /translation="MAKYFTETGISVREYFDFFGEFVVLPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGDGNIGSMGLKVPR"
BASE COUNT         1718 a         1828 c         1572 g         1626 t
ORIGIN      
        1 tttaacgcaa atttatttaa aaaaatagac tttaaagaaa gaaaatcaat cacatagaat
       61 ttctgcaaac aaagaaaaaa ggaagccgca gcttcctttt caattttttg gattaagcag
      121 ccaaagcagc tttggctttt tcaaccaatt gtgcaaaagc ggctttatcg aacacggcca
      181 aatcagccaa tactttgcgg tcgatttcga tagaggcgcg tttcagacca ttcataaatt
      241 tgctgtaaga caacccgttt tcacgcgcac ctgcattgat acggacaatc cacaattgac
      301 ggaattggcg tttgcgttgg cggcggtcgc ggtatgcgta ttggccggct ttcattaccg
      361 cctgcttggc aacgcggtaa acgtttttac gacggccgcg gtagcctttg gctaacgcga
      421 agattttttg gtgacgggca cgggcggtaa caccgcgttt tacgcgtggc atattctaaa
      481 ctccttaagc gtagggtaac attttagcaa cagaagccaa atcgcgatca tttaccatag
      541 aggtaccgcg cagttggcgt ttgtttttgg tggtcttttt agtcaagatg tggcgtttga
      601 acgcatgagc gcgtttcaca ccgccgttac ccagtacttt aaagcgtttt ttcgcgctag
      661 acttggtttt cattttaggc atgggaaaac tccattcgtt atcagataag gcattagggg
      721 gttttaaaac atcggtttca aacacttgaa cccacaatac cacggttttt tgccgcaatt
      781 gaaaacttac tccgaagcgg caatcggagt aagcggagaa ttatagcttt attttttctt
      841 cggcgcaatc atcatcacca tttggcgacc ttccattttg ggaaaggact cgatttgcgc
      901 cacttcagcc aaatcttctt tcacacgttc caaaagttgc gcgccgagtt gctggtgagc
      961 catttcacgg ccgcggaaac gcaatgtcac tttgacttta tcgccgtcgg caaggaagcg
     1021 gttgatgttg cgcatcttga tttgataatc gccctcatcc gtacccggac ggaatttgat
     1081 ttccttgatt tgcacctgct tttggttttt cttggcttcg tcgcgtttct tggcctgctg
     1141 gtatttgtat ttaccgtaat ccatcagttt gcacacaggc ggtttagcag ttggggaaat
     1201 ctctaccaaa tcgacatcct gcccttcggc catagccaaa gcttcacgaa ctgaaacaac
     1261 accaagctgt tcgcctgact cactgattaa acgcacttct ttggcggtaa tttcgccgtt
     1321 gattcgtgct tcgcgttctt gagcgatgat gaatactcct ataaaaatta atgattgacg
     1381 agggcatcag tgatttcttg ctgcaattgc gcaatgaaat catccaaatc caaagaaccc
     1441 aaatcttctg ctttgcggcg taccgccact ttgttttcct gcttctcctt atcgccgaca
     1501 acgatttgat aagggaaacg gtattggctg ttgtcgcgga ttttgtaacc gattttttcg
     1561 ttacgcaaat ccaactcggc gcggaatcct gccgcctgca atttggcagc cacttcccga
     1621 caataatctg cctgattttc ggtaatattc ataatcacca tttgaaccgg agccaaccat
     1681 aacgggaaag agcctgcatg gttctcaatc agaatgccga taaatcgctc caaagaacct
     1741 aaaatggcgc gatgcaacat aacaggtcgc gagcggtcgt tgttttcggt tacatattct
     1801 gcacccaagc gttccggcaa gacgaaatcc agttgtaatg taccgcattg ccaagaacga
     1861 cccaaggcat ctctgacatg atattcgatt ttaggcccgt aaaacgcacc ctcgcccggc
     1921 aattcgcccc attccacgcc gcaggcagtc aatgcctcgc gcaaaccctg ctctgcctta
     1981 tcccacacgt catctgaacc tgcacgtttt tcagggcgaa gagaaagctt gacggataca
     2041 tcatggaaac cgaactgttt gtagatgcga accaacaatt cattgaacgc acgggcctcg
     2101 ctgacgattt ggtcttcggt acagaaaata tgcgcatcat cctgcacaaa tccacggacc
     2161 cgcatcagac catgcaatgc accgctcggc tcgttgcggt ggcaggaacc gaattccgcc
     2221 aaacgcatcg gcaaatctcg atacgaacgc aaaccgttgt taaaaatttg aacatgaccc
     2281 ggacagttca tcggtttaac cgcatattcg cgtttttccg aactggttac gaacatatta
     2341 tctttgtagt tgtcccaatg gccggatttt tcccaaaagg ttttatccat gatttgaggc
     2401 gttttgacct ctttataacc ggcggcgttc agttctttac gcatatgctg ttcaatcact
     2461 tgccacaaag cccagccttt aggatgccaa aacaccatgc ccggcgcttc gtcttgcaga
     2521 tggaacagat ccaattgctt gccaagcttg cggtggtcgc gcttttcggc ttcttcgata
     2581 cgttgaatat aggctttcaa ctcgtctttt gtcgcccaag ccgtaccgta tatgcgttgc
     2641 agcatttcat tattgctgtc gccgcgccag tatgcgcccg ccagcttggt cagtttgaag
     2701 tttttcagga aacgggtatt cggaacgtgc ggaccgcggc acatatcgac atattcctgg
     2761 tgatgataca tccccatcgc ttccacttcg ggcatatcgt caatcaggcg cagtttgtat
     2821 tcttcgccgc gctcttgaaa aattttaatc gcctccgcac gcggagtcat gattttgacc
     2881 acatcatagt cttgggcaat caattctttc atacgcgctt caatggcggc aacatcttcc
     2941 ggtgtaaacg gtttttccgt ggcgatgtcg taataaaagc cctcttcaat gacggggccg
     3001 ataaccattt ttgcattagg atagagttgc ttgacggcat gcccgacaag atgggcgcag
     3061 gaatggcgga tgatttcgat gccttcctga tctttcggag taatgatttg aacagcagaa
     3121 ttttcaacaa tcgggtcgca cgcatcgacc aatttgccgt ttaccctgcc tgccaccgcc
     3181 gccctcgcca aaccgacacc gatagacgca gcaatttgag ccacggtaac gggggattcg
     3241 tattggcgga ctgagccgtc cggcaaggta atgttcaaca tcaaaaagct ccaaaacatt
     3301 aaaaaataac ggcataaatg ccgttatggg aatttggtag gcacgattgg attcgaacca
     3361 acgaccccca ccatgtcaag gtggtgctct aaccaactga gctacgtgcc ttcaaagaat
     3421 ttttgcattt tatcgggtcg ttttaatttt tgcaagaggt atgtgcattt ctttatgcaa
     3481 cattgtggca agatttgggg atgtcgtctg aaaaaccgtg ggaattcatt tataatgccg
     3541 tcttttaaaa catatttcgc cccctgtcgc ccaactgaca ttcaatctta tgcttaaatt
     3601 taccttacac aaaaaagacg gatacgcccg acgcggcacg ctggagttga accacggcaa
     3661 aattgaaacg ccggtattta tgcctgtcgg tacttacggc tcggttaagg cgatgaaccc
     3721 gcaaaacctg cacgacatca aggcgcaaat tattttgggc aacacttatc atttgtggct
     3781 gcgtccgggc ttggaggtcg tcgaacagtt tggagggctt cacggcttta tcggctggga
     3841 caaaccgatt ctgaccgact cgggcggttt tcaggttttt tctttgtcgg atatgcgcaa
     3901 gctgacggaa gaaggctgta cgttcaaaag cccgatcaac ggcgacaagc tgtttttatc
     3961 gcctgaaatt tccatgaaaa tccaaacggt tttgaactcg gacatcgcga tgcagctgga
     4021 cgaatgcacg ccgggcgagg cgacgcgcga acaggcgcga aaatcgttgc aaatgagcct
     4081 gcgctgggcg gaacggagca aaaaagcctt tgaagatttg aaaaacccga acgcactgtt
     4141 cggcatcgtg caaggcgcga tgtatgaaga tttgcgcgaa gagtcgctga aaggcttgga
     4201 agagctcgat ttccccggct tggccatcgg cggcttgtcc gttggcgaac ctaagcccga
     4261 aatgtaccgc atgttgcgcg ccgtcggccc tatcctgccg gaacacaaac ctcattattt
     4321 aatgggcgtc ggtacgcctg aagacttagt gtacggcgtg gcacacggcg tggatatgtt
     4381 cgactgcgtc atgcctactc gcaatgcgcg taacggctgg ctgtttaccc gttttggcga
     4441 tttgaagatc aaaaacgcca aacacaagct cgacaagcgt ccgatagacg aaagctgcac
     4501 ctgctacgcc tgccaaaact tcagccgcgc ctacctgcac catctgcacc gcgccggcga
     4561 aatcttgggc gcacagctca acaccatcca caacctgcat ttctaccaag tcattatggc
     4621 ggaaatgcgc gatgccatag aacaaggcaa atttgccgac tggcaggcgc gattccacga
     4681 aaaccgtgct cgcggcacag actgactccc ggcaatgccg tctgaagccg cttcagacgg
     4741 cattttgccg ctttacccta cccgcactat ttttcagaaa ccgatcatgc ttccattctt
     4801 tccagaaccc tccctttcct atacgcaaca aaaccgtacc gccgttttgc tgttgaacct
     4861 cggcacgccc gacgcgccga ccgcgcaggc ggtacgacct tatctgaagt cctttctgac
     4921 cgaccggcgc gtcgtcgaac tgcccaaatg gctgtggtat cccattctgc atggtctggt
     4981 actgacgttg cgccccaaaa aaagcgcgca cgcctatgaa aaaatctggt ttaaggaagg
     5041 ttcgccccta gaagtttaca cagcacgcca agctgccgcg cttgccgaac gtatgcccga
     5101 cctcatcgtc cgccacgcca tgacctacgg caatccttcg gtggcagacg tattgtcgga
     5161 actgaaggcg caaggcgcgg gcagactgct ggtcatcccg atgtacccgc aatatgccgc
     5221 ttccagcagc ggagcggcag tagataaggt gtgcgaacaa ttactgctgc aacggaacca
     5281 aatgagcgtc cgcaccgttt cgcgctttta tgacgatacc ggctacattg atgcgatgaa
     5341 aaaccacatc ctccgatatt gggcggaaca cggacgtggg aaaaaactga tgttgagttt
     5401 tcacggcgta ccgcagaagc actacgacct cggcgacccc tatcccgacg agtgccgcca
     5461 caccgccaaa ctgcttgccg aagcactgga actgaccgaa gaccaatatg tcgtatcgtt
     5521 ccaaagccaa ttcggcaggg caaaatgggt tacaccgagc acgcaggatt tgttcggcaa
     5581 actgcccaaa cagggggtaa ccgagctgga cgtattctgc ccgggctttt tggcagactg
     5641 tttggaaacc atggaagaaa tcgccctgat ggggcgggaa cagttttacg aagcaggcgg
     5701 caaaagctac cgctacatcc cctgcctcaa cgacaacccc gactggatag acgcactcgt
     5761 cgcacttgcc gaagaaaacc ttggcggctg gcgttgaaac tgtttgaccc atgtctaaaa
     5821 tgccgtctga acgccgtgtt cagacggcat tttcccgcta ctttagcgta tgatggcatc
     5881 tatgccggac aacaacatca agtgcaacct tactaccgat tcggcaaaaa aatctttcac
     5941 ccgctacgca aaatcaacaa caaggtttca aacattaagg aaacaccaat gaacacaacc
     6001 cgactgccga ccgccctcgt cttgggctgc ctctgcgccg ccgcttctgc cgccgacaac
     6061 agcatcatga caaaagggca aaaagtgtac gaatccaact gcgtcgcctg ccacggcaaa
     6121 aagggcgaag gccgcggaac catgtttccg ccgctctacc gctccgactt catcatgaaa
     6181 aaaccgcagg tgctgctgca cagcatggtc aaaggcatca acggtacaat caaagtcaac
     6241 ggcaaaacct acaacggatt catgcccgca accgccatca gcgatgcgga cattgccgcc
     6301 gtcgccactt atatcatgaa cgcctttgac aacggcggcg gaagcgttac cgaaaaagac
     6361 gtaaaacagg caaaaggcaa aaaaaactaa acagacaaaa tgccgtctga aaccggcaat
     6421 ccggcttcag acggcattca aatcaaacct ttctaacgcg gtactttcag ccccatagac
     6481 ccgatattgc cgtccccgtc aacctccttc gcggtcagca taaagccgcc gatgtcaata
     6541 cggccgcact cgaccggctc ctgactgtcg gaacgcttat cgaaaagctc ggcaaggctc
     6601 aaaccctctt cgcccgcttc cagcctcaaa ccgtaagcaa gtgccaaatc acccgaacgt
     6661 gctgccggca aaacgacaaa ctcaccgaag aaatcaaaat actcacggac gctaataccc
     6721 gtctcggtaa agtatttcgc catt
//
LOCUS       DAWKOX010000113         6722 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.113, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000113 DAWKOX010000000
VERSION     DAWKOX010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6722
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.113"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            347..2194
                     /locus_tag="WJK78_001497"
     CDS             347..2194
                     /locus_tag="WJK78_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ7598412.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATVDL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLTGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMELKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            2249..6418
                     /locus_tag="WJK78_001498"
     CDS             2249..6418
                     /locus_tag="WJK78_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ7598413.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADCNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRINPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     HFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNVAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTRKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNGKGK"
BASE COUNT         1584 a         2147 c         1762 g         1229 t
ORIGIN      
        1 agaatcgttc tctttgagct aaggcgagcc aacgccgtac tggtttttgt taatccacta
       61 tgaaggttgc gttgatttgc cctatgcagt gccggacagg ctttgcttta tcattcggcg
      121 cgacggttta atttattgaa cgaaaataaa tttatttaat cccgtttatt ttccgacact
      181 attccgaaac gcagcctgtt ttccatatgc ggattagaaa caaaatacct taaaacaagc
      241 agatacattt ccagcgggcc gcaacctccg aaataccggc ggcagtatgc cgtctgaagc
      301 gtcccgcccc gtccgaacag tgttagaatc gaaatccgcc acaccgatgc acgatacccg
      361 taccatgatg atcaaaccga ccgccctgct cctgccggct ttatttttct ttccgcacgc
      421 atacgcgcct gccgccgacc tttccgaaaa caaggcggcg ggtttcgcat tgttcaaaaa
      481 caaaagcccc gacaccgaat cagttaaatt aaaacccaaa ttccccgtcc gcatcgacac
      541 gcaggatagt gaaatcaaag atatggtcga agaacacctg ccgctcatca cgcagcagca
      601 ggaagaagta ttggacaagg aacagacggg cttcctcgcc gaagaagcac cggacaacgt
      661 taaaaccatg ctccgcagca aaggctattt cagcagcaaa gtcagcctga cggaaaaaga
      721 cggagcttat acggtacaca tcacaccggg cccgcgcacc aaaatcgcca acgtcggtgt
      781 cgccatcctc ggcgacatcc tttcagacgg caacctcgcc gaatactacc gcaacgcgct
      841 ggaaaactgg cagcagccgg taggcagtga tttcgatcag gacagttggg aaaacagcaa
      901 aacttccgtc ctcggcgcgg taacgcgcaa aggctacccg cttgccaagc tcggcaacac
      961 ccgggcggcc gtcaaccccg ataccgccac cgtcgatttg aacgtcgtcg tggacagcgg
     1021 ccgccccatc gccttcggcg actttgaaat caccggcaca cagcgttacc ccgaacaaat
     1081 cgtctccggc ctggcgcgct tccaaccggg cacgccctac gacctcgacc tgctgctcga
     1141 cttccaacag gcactcgaac aaaacgggca ttattccggc gcgtccgtac aagccgactt
     1201 cgaccgtctc caaggcgacc gcgtccccgt caaagtcagc gtaaccgagg tcaaacgcca
     1261 caagctcgaa accggcatcc gcctcgattc ggaatacggt ttgggcggca aaatcgccta
     1321 cgactattac aacctcttca acaaaggcta tatcggctcg gtcgtctggg atatggacaa
     1381 atacgaaacc acgcttgccg ccggcatcag ccagccgcgc aactatcggg gcaactactg
     1441 gacaagcaac gtttcctaca accgttcgac cacccaaaac ctcgaaaaac gcgccttctc
     1501 cggcggcatc tggtatgtgc gcgaccgcgc gggcatcgat gccaggctgg gggcagagtt
     1561 tctcgcagaa ggccggaaaa tccccggctc ggatgtcgat ttgggcaaca gccacgccac
     1621 gatgctgacc gcctcttgga aacgccagct gctcaacaac gtgctgcacc ccgaaaacgg
     1681 ccattacctc gacggcaaaa tcggtacgac tttgggcaca ttcctgtcct ccaccgcgct
     1741 gatccgcacc tctgcccgcg caggttattt cttcacgccc gaaaacaaaa aactcggcac
     1801 gttcatcata cgcggacaag caggttacac cgttgcccgc gacaatgccg acgttccttc
     1861 ggggttgatg ttccgcagcg gcggcgcgtc ttccgtgcgc ggttacgaac tcgacagcat
     1921 cgggcttgcc ggcccgaacg gatcggtcct gcccgaacgc gccctcttga cgggcagcct
     1981 ggaataccaa ctgccgttta cgcgcaccct ttccggcgcg gtattccacg atatgggcga
     2041 tgccgccgcc aatttcaaac gtatggagct gaaacacggt tcgggactgg gcgtgcgctg
     2101 gttcagcccg ctcgcgccgt tttccttcga catcgcctac gggcacagcg ataagaaaat
     2161 ccgctggcac atcagcttgg gaacacgctt ctaaaccgat acggccgctt cagacggcat
     2221 tgcagcaaac tattttgaaa cagacattat gaccgatacc gcaccgacag ataccgatcc
     2281 gaccgaaaac ggcacgcgca aaatgccgtc tgaacaccgc cccaccccgc cggcaaaaaa
     2341 acgccgcccg ctgctgaagc tgtcggcggc actgctgtct gtcctgattt tggcagtatg
     2401 tttcctcggc tggctcgccg gcacggaagc gggtttgcgc ttcgggctgt accaaatccc
     2461 gtcttggttc ggcgtaaaca tttcctccca aaacctcaaa ggcacgctgc tcgacggctt
     2521 cgacggcgac aactggtcga tagaaaccga gggggcagac cttaaaatca gccgcttccg
     2581 cttcgcgtgg aaaccgtccg aactgatgcg ccgcagcctg cacattaccg aaatttccgc
     2641 cggcgacatc gccatcgtta ccaaaccgac tccgcctaaa gaagaacgcc cgccgctcag
     2701 ccttcccgac agcatagacc tgcctgccgc cgtctatctc gaccgcttcg agacgggcaa
     2761 aatcagcatg ggcaaagcct ttgacaaaca aaccgtctat ctcgaacggc tggatgcttc
     2821 ataccgttac gaccgcaaag gacaccgcct tgacctgaag gccgccgaca cgccgtggag
     2881 cagttcgtcg gggtcagcct cggtcggctt gaaaaaaccg tttgccctcg ataccgccat
     2941 ttacaccaaa ggcggactcg aaggcaaaac catacacagt acggctcggc tgagcggcag
     3001 cctgaaggat gtgcgcgccg aactggcgat cgacggcggc aatatccgcc tctcgggaaa
     3061 atccgtcatc cacccgtttg ccgaatcatt ggataaaaca ttggaagaag tactggtcaa
     3121 agggttcaac atcaatccgg ccgccttcgt gccttccctg cccgatgccg gactgaattt
     3181 cgacctgacc gccatcccgt cgttttcaga cggcatcgcg ctggaaggtt cgctcgattt
     3241 ggaaaacacc aaagccggct ttgccgactg caacggcatc cccgtccgtc aggttttagg
     3301 cggctttgtc atccggcagg acggcacggt gcatatcggc aatacgtccg ccgccctgct
     3361 cggacggggc ggcatcaggc tgtcgggcaa aatcgacacc gaaaaagaca tcctcgattt
     3421 aaatataggc atcaactccg tcggcgcgga agacgtactg caaaccgcgt tcaaaggcag
     3481 gttggacggc agcatcggca tcggtggcac gaccgcctcg cccaaaatct cttggcaact
     3541 cggcatcggc acggcgcgca cggacggcag cctcgccatt gcaagcgacc ccgcaaacgg
     3601 acagcggaaa ctggtgctcg acaccgtcaa catcgccgcc gggcaaggca gcctgaccgc
     3661 gcaaggctat ctcgagctgt ttaaagaccg cctgctcaag ctggacatcc gttcccgcgc
     3721 attcgaccct tcgcgcatca atccgcaact tccggcaggc aatatcaacg gctcaataaa
     3781 ccttgccggc gaactggcaa aagagaaatt cacaggcaaa atgcggtttt tacccggcac
     3841 gttcaacggc gtaccgattg ccggcagtgc cgacattgtt tacgagtccc gccaccttcc
     3901 gcgtgccgcc gtcgatttgc ggctggggcg gaacatcatc aaaacagacg gcggcttcgg
     3961 caaaaaaggc gaccggctta acctcaatat caccgcaccc gatttatccc gtttcggttt
     4021 cggactcgcg gggtctttaa atgtacgcgg acacctttcc ggcgatttgg acggcggcat
     4081 ccgaaccttt gaaaccgacc tttccggcgc ggcgcgcaac ctgcacatcg gcaaggcggc
     4141 agacatccgt tcgctcgatt tcaccctcaa aggttcgccc gacacaagcc gcccgatacg
     4201 cgccgacatc aaaggcagcc gcctttcgct gtcgggcgga gcggcggttg tcgataccgc
     4261 cgacctgatg ctggacggca cgggcgtgca gcaccgcatc cgcacacacg ccgccatgac
     4321 gctggatggc aaaccgttca aattcgattt ggacgcttca ggcggcatca acagggaact
     4381 tacccgatgg aagggcagca tcggcatcct cgacatcggc ggcgcattca acctcaagct
     4441 gcaaaaccgt atgacgctcg aagccggtgc ggaacgcgtg gcggcaagtg cggcaaattg
     4501 gcaggcaatg ggcggcagcc tcaacctgca acacttttcc tgggacagga aaaccggcat
     4561 atcggcaaaa ggcggcgcac gcggtctgca tatcgccgag ttgcacaatt tcttcaaacc
     4621 gcccttcgaa cacaatctgg ttttaaacgg cgactgggat gtcgcctacg ggcgcaacgc
     4681 gcgcggctac ctcaatatca gccggcaaag cggcgatgcc gtattgcccg gcgggcaggc
     4741 tttgggtttg aacgcatttt ccctgaaaac gcgctttcaa aacgaccgca tcggaatcct
     4801 gcttgacggc ggcgcgcatt tcgggcggat taacgccgat ttggacatcg gcaacgcctt
     4861 cggcggcaat atggcaaatg caccgctcgg cggcaggatt accgcctccc ttcccgactt
     4921 gggcgcattg aagccctttc tgcccgccgc cgcgcaaaac attaccggca gcctgaatgc
     4981 cgccgcgcaa atcggcggac gggtcggctc tccgtccgtc aatgtcgccg tcaacggcag
     5041 cagcaactac gggaaaatca acggcaacat caccgtcggg caaagccgct ctttcgatac
     5101 cgcgcctttg ggcggcaggc tcaacctgac cgttgccgat gccgaagtat tccgcaactt
     5161 cctgcccgtc ggacaaaccg tcaaaggcag cctgaatgcc gccgtaaccc tcggcggcag
     5221 catcgccgac ccgcacttgg gcggcagcat caacggcgac aagctctatt accgcaacca
     5281 aacccaaggc atcatcttgg acaacggttc gctgcgttcg catatcgcag gcaggaaatg
     5341 ggtaatcgac agcctgaaat tccgtcacga agggacggcg gaactctccg gtacggtcgg
     5401 tatggaaaac agcggacccg atgtcgatat cggcgcggtg ttcgacaaat accgcatcct
     5461 gtcccgcccc aaccgccgcc tgacggtttc cggcaacacc cgcctgcgct attcgccgca
     5521 aaaaggcata tccgttaccg ggatgattaa aacggatcag gggctgttcg gttcgcaaaa
     5581 atcctcgatg ccgtccgtcg gcgacgatgt cgtcgtatta ggcgaagtca aaaaagaggc
     5641 ggcggcaccg ctccccgtca atatgaacct gactttagac ctcaatgacg gcatccgctt
     5701 cgccggctac ggcgcggacg ttaccatagg cggcaaactg accctgaccg cccaatcggg
     5761 cggaagcgtg cggggcgtgg gcacggtccg cgtcatcaaa gggcgttata aggcatacgg
     5821 gcaggatttg gacattacca aaggcacggt ctcctttgtc ggcccgctca acgaccccaa
     5881 cctcaacatc cgcgccgaac gccgcctttc ccccgtcggt gcgggcgtgg aaatattggg
     5941 cagcctcaac agcccgcgca ttacgctgac ggcaaacgaa ccgatgagtg aaaaagacaa
     6001 gctctcttgg ctcatcctca accgcgccgg cagcggcagc agcggcgaca atgccgccct
     6061 gtccgcagcc gcaggcgcgc tgcttgccgg gcaaatcaac gaccgcatcg ggctggtgga
     6121 tgatttgggc tttacccgca agcgcagccg caacgcgcaa accggcgaac tcaaccccgc
     6181 cgaacaggtg ctgaccgtcg gcaaacaact gaccggcaaa ctctacatcg gctacgaata
     6241 cagcatctcc agcgcggaac agtccgtcaa actgatttac cggctgaccc gcgccataca
     6301 ggcggttgcc cgtatcggca gccgttcgtc gggcggcgag ctgacataca ccatacgttt
     6361 cgaccgcttc tccggttcgg acaaaaaaga ctccgccgga aacggcaaag gaaaataagc
     6421 ggttttcaga cggcgcgccg ccaaaccgga catttgaaaa cctgcttttc caccgtccgc
     6481 cgccgccgtc cgcctgcaag ggaacagaat cgatatagtg aattaacaaa aatcaggata
     6541 aggcgacgaa gccgcagaca gtacaaatag tacggaaccg attcactcgg tgcttgagca
     6601 ccttagagaa tcgttctctt tgagccaagg cgaggcaacg ccgtaccggt ttttgttaat
     6661 ccgctatatt ccgccatctc taagatttac agcgatacac aggtaattta aggaatgccc
     6721 ga
//
LOCUS       DAWKOX010000114         6690 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.114, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000114 DAWKOX010000000
VERSION     DAWKOX010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6690
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.114"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            558..1433
                     /gene="prpB"
                     /locus_tag="WJK78_001499"
     CDS             558..1433
                     /gene="prpB"
                     /locus_tag="WJK78_001499"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ7598414.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            1519..2673
                     /gene="prpC"
                     /locus_tag="WJK78_001500"
     CDS             1519..2673
                     /gene="prpC"
                     /locus_tag="WJK78_001500"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ7598415.1"
                     /translation="MTETTQTPTLKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            2834..3622
                     /locus_tag="WJK78_001501"
     CDS             2834..3622
                     /locus_tag="WJK78_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEZ7598416.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIAATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLTDERNPLYQMIISMF"
     gene            3700..6306
                     /gene="acnD"
                     /locus_tag="WJK78_001502"
     CDS             3700..6306
                     /gene="acnD"
                     /locus_tag="WJK78_001502"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ7598417.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRQAGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKTQKEIIDRDLYATAVLS
                     GNRNFDGRVHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPDTNRH
                     TLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
BASE COUNT         1657 a         1675 c         1737 g         1621 t
ORIGIN      
        1 ttttattaaa ttatataaaa atcaaatata taataaaata catcggattg cttaaaaata
       61 atacattgtt tttatgtata aaatatttta taagttttca ggattttgat tatcgaaaat
      121 ttttcttgat ttcctgacaa ttttattgaa acaaataatt caaaattaat ctagtttaat
      181 catggaatta aaataaaata ttaaaattat gtaatgagtc tccttaaaaa tgtttgacat
      241 tttcagtctt gtgttttaga ttatcgaaaa ataaaactac ataacactac aaaggaacat
      301 tactatgaaa ccaattcaga tgttttcccc ttttctgaat aatccccttg ttttcttctt
      361 gtctgcggtt ttgccgcata attccgaacg gtctgctgtt tttctttgat tcgttttaaa
      421 tatcaataag ataatttttc ccatatattt ttaatgattg gattgggatg cccgacgcgt
      481 cggatggctg tgttttgccg tccgaatgtg atggaagcct gtccatactg aaaaaaagtc
      541 tataaaggag aaatatgatg agtcaacact ctgccggagc acgtttccgc caagccgtga
      601 aagaatcgaa tccgcttgcc gtcgccggtt gcgtcaatgc ttattttgca cgattggcca
      661 cccaaagcgg tttcaaagcc atctatctgt ccggcggcgg cgtggcagcc tgttcttgcg
      721 gtatccctga tttgggcatt accacaatgg aagatgtgct gatcgacgca cgacgcatta
      781 cggacaacgt ggatacgcct ctgctggtgg acatcgatgt gggttggggc ggtgcattca
      841 atattgcccg taccattcgc aactttgaac gcgccggtgt tgcagcggtt cacatcgaag
      901 atcaggtagc gcaaaaacgc tgcggccacc gtccgaacaa agccattgta tctaaagatg
      961 aaatggtcga ccgtatcaaa gctgccgtag atgcgcgcgt tgatgagaac ttcgtgatta
     1021 tggcgcgtac cgatgcgctg gcggtagaag gtttggatgc cgctatcgaa cgcgcccaag
     1081 cttgtgtcga agccggtgcg gacatgattt tccctgaagc catgaccgat ttgaacatgt
     1141 accgccaatt tgcagatgcg gtgaaagtgc ccgtgttggc gaacattacc gagtttggtt
     1201 ccactccgct ttatacccaa agcgagctgg ctgaaaacgg cgtgtcgctg gtgctgtatc
     1261 cgctgtcatc gttccgtgca gcaagcaaag ccgctctgaa tgtttacgaa gcgattatgc
     1321 gcgatggcac tcaggcggcg gtggtggaca gtatgcaaac ccgtgccgag ctgtacgagc
     1381 atctgaacta tcatgccttc gagcaaaaac tggataaatt gtttcaaaaa tgatttaccg
     1441 ctttcagact gcctttcaac aaatccgcat cggtcgtctg aaaacccgaa acccataaaa
     1501 acacaaagga gaaataccat gactgaaact actcaaaccc cgaccctcaa acctaaaaaa
     1561 tccgttgcgc tttctggcgt tgcggccggt aataccgctt tgtgtaccgt tggccgtacc
     1621 ggcaacgatt tgagctatcg cggttacgac attctggatt tggcacaaaa atgcgagttt
     1681 gaagaagtcg cccacctgct gattcacggc catctgccca acaaattcga gctggccgct
     1741 tataaaacca agctcaaatc catgcgcggc ctgcctatcc gtgtgattaa agttttggaa
     1801 agcctgcctg cacataccca tccgatggac gtaatgcgta ccggcgtatc catgctgggc
     1861 tgcgttcatc ctgaacgtga aagccatccg gaaagtgaag cgcgcgacat cgccgacaaa
     1921 ctgatcgcca gcctcggcag catcctcttg tactggtatc aatattcgca caacggcaaa
     1981 cgcattgagg ttgaaagcga cgaagagacc atcggcggtc atttcctgca actgttgcac
     2041 ggcaaacgcc caagcgaatc acacatcaaa gccatgcacg tttcactgat tctgtatgcc
     2101 gaacacgagt tcaacgcttc tacctttacc gcccgcgtga tcgccggtac aggctctgat
     2161 atgtactcca gcattaccgg agcaatcggc gcgttgaaag gtccgaaaca cggcggcgcg
     2221 aacgaagtgg cttacgatat tcaaaaacgc taccgcaatg ccgacgaagc tgaagccgac
     2281 atccgcgaac gcatcggccg caaagaaatc gtgatcggtt tcggtcatcc ggtgtacacc
     2341 atttccgacc ctcgcaacgt tgtcattaaa gaagtggcac gcggtttgag caaagaaacc
     2401 ggcgatatgc gcctctttga cattgccgaa cgtttggaaa gcgtgatgtg ggaagagaaa
     2461 aaaatgttcc cgaatctgga ctggttctct gccgtttcct accaaaaatt gggcgtaccg
     2521 accgctatgt tcacaccgct gttcgtaatt tcccgtacaa ccggttggag cgcacacgtt
     2581 cttgagcaac gcaaagacgg caaaatcatc cgtccgagcg caaactacac aggccctgaa
     2641 gatttggcgt ttgtggagat tgaagaacga taattgaaga atgcaatagc agtttgttct
     2701 ttaatttcgg tatgcaaagc tgaggatttc agacgacctt gcctgattgg aaaggttgtc
     2761 tgaaataagt ttaaaaattt aacctaatag aagaagataa tcctgtattg gtgcaagtaa
     2821 caggataaga aacatggaag atttatacat aatactcgct ttgggtttgg ttgcgatgat
     2881 tgccggattt atcgatgcga ttgcgggtgg gggtggtttg attacgctgc ctgcactctt
     2941 gttggcaggt attcctcccg tgtcggcaat tgccaccaac aagctgcaag cagccgctgc
     3001 tacgttttcg gctacggttt cttttgcacg caaaggtttg attgattgga agaaaggtct
     3061 cccgattgcg gcagcatcgt ttgcaggcgg cgtggtcggt gcattatcgg tcagcttggt
     3121 ttccaaagat attctgctgg cggtcgtgcc ggttttgttg atatttgtcg cgctgtattt
     3181 tgtgttttcg cccaagctcg acggcagtaa ggaaggcaaa gccagaatgt ctttttttct
     3241 gttcggtctg acggttgcac cacttttggg tttttacgac ggtgtgttcg gaccgggtgt
     3301 cggctcgttt tttctgattg cctttattgt tttgctcggc tgcaagctgt tgaacgcgat
     3361 gtcttacacc aaattggcga acgttgcctg caatcttggt tcgctatcgg tattcctgct
     3421 gcacggttcg attattttcc cgattgcggc aacgatggcg gtcggtgcgt ttgtcggtgc
     3481 gaatttaggt gcgagatttg ccgtccgctt cggttcgaag ctgattaagc cgctgctgat
     3541 tgtcatcagc atttcgatgg ctgtgaaatt gttgacagac gagagaaatc cgctgtatca
     3601 gatgattatt tcgatgtttt aaaccctttc agacgacccc ttcaaaacgt cggctgaaac
     3661 ctcaaaccac aagaaaaaca gatccccagg agaaccgaca tggctgccaa ccaacgttac
     3721 cgcaaaccgc tgcccggtac ggatttggaa tactacgacg cgcgtgcggc gtgtgaggac
     3781 atcaagcccg gctcttacga caagctgcct tacacgagcc gcattttggc ggagaatttg
     3841 gtcaaccgcg cggacaaagt cgatttgccg acgctgcaaa gctggctggg tcagctgatt
     3901 gagggaaaac aggaaatcga ctttccttgg tatccggcgc gggtggtgtg ccacgatatt
     3961 ctggggcaga ccgcgttggt ggatttggca ggtctgcgcg atgcgattgc cgaaaaaggc
     4021 ggcgatcctg ccaaagtgaa tccggtggtg caaacccagc tcattgtcga ccactctttg
     4081 gccgttgaat gcggcggtta cgatcctgat gccttccgca aaaaccgcga aatcgaagac
     4141 agacgtaacg aagaccgttt ccactttatc aactggacaa aaaccgcatt tgaaaatgtg
     4201 gacgtgattc cggcgggcaa cggcatcatg caccaaatca atctggaaaa aatgtcgccg
     4261 gttgttcaag ttaaaaacgg cgtggcgttc cccgatacct gcgtcggcac ggattcgcac
     4321 acgccgcacg tcgatgcgct gggcgtgatt tccgtgggtg tgggcggatt ggaagcggaa
     4381 accgtaatgc tgggacgcgc gtccatgatg cgcctgcccg atattgtcgg tgtggagctg
     4441 accggcaaac ggcaggcggg cattacggcg acggatattg tgttggcgct gaccgagttt
     4501 ctgcgcaaag agcgcgtggt cggggcgttt gtcgaattct tcggcgaggg cgcgagaagc
     4561 ctgtctatcg gcgaccgcgc gaccatttcc aacatgacgc cggagttcgg cgcgactgcc
     4621 gcgatgttcg ctattgatga gcaaaccatt gattatttga aactgaccgg acgcgacgac
     4681 gcgcaggtga aattggtgga aacctacgcc aaaaccgcag gcttatgggc agatgccttg
     4741 aaaaccgccg tttatcctcg cgttttgaaa tttgatttga gcagcgtaac gcgcaatatg
     4801 gcaggtccaa gtaacccgca tgcccgtttt gcgaccgccg atttggcggc gaaagggctg
     4861 gcgaagcctt acgaagagcc ttcggacgga caaatgcccg acggcgcggt catcatcgcc
     4921 gcgattacca gttgcaccaa cacttccaac ccgcgcaacg tcgttgccgc cgcgctgttg
     4981 gcacgcaatg ccaaccgcct cggcttgaaa cgcaaacctt gggtgaaatc ttcatttgcc
     5041 ccgggttcaa aagtagccga aatctatttg aaagaagcag gcctgctgcc cgaaatggaa
     5101 aaactcggct tcggtatcgt cgccttcgcc tgcaccacct gtaacggcat gagtggcgcg
     5161 ctggatccga aaacccagaa agaaatcatc gaccgcgatt tgtacgccac cgccgtactg
     5221 tcaggcaacc gcaacttcga cggccgtgtc catccgtatg cgaaacaggc tttcctcgct
     5281 tcgcctccgt tggtcgttgc ctacgcgctg gcaggcagta tccgtttcga tattgaaaac
     5341 gacgtactcg gcgttgcaga cggcaaggaa atccgcctga aagacatttg gcctgccgat
     5401 gaagaaatcg atgccgtcgt tgccgaatat gtgaaaccgc agcagttccg cgatgtgtat
     5461 gtaccgatgt tcgacaccgg cacagcgcaa aaagcaccta gtccgctgta cgactggcgt
     5521 ccgatgtcca cctatatccg ccgcccacct tactgggaag gcgcactggc aggggaacgc
     5581 acattaagag gtatgcgtcc gctggcgatt ttgcccgaca acatcaccac cgaccacctc
     5641 tcgccgtcca atgcgatttt ggccgtcagt gccgcaggcg agtatttggc gaaaatgggt
     5701 ttgcctgaag aagacttcaa ctcttacgca acccaccgcg gcgaccactt gaccgcccaa
     5761 cgcgctacct tcgccaatcc gaaactgttt aacgaaatgg tgaaaaacga agacggcagc
     5821 gtgcgccaag gctcgttcgc ccgcgtcgaa cccgaaggcg aaaccatgcg catgtgggaa
     5881 gccatcgaaa cctatatgaa ccgcaaacag ccgctcatca tcattgccgg tgcggactat
     5941 ggtcaaggct caagccgcga ctgggctgca aaaggcgtac gcctcgccgg cgtagaagcg
     6001 attgttgccg aaggcttcga gcgtatccac cgcaccaacc ttatcggcat gggcgtgttg
     6061 ccgctgcagt tcaaacccga caccaaccgc cataccctgc aactggacgg tacggaaacc
     6121 tacgacgtgg tcggcgaacg cacaccgcgc tgcgacctga ccctcgtgat tcaccgtaaa
     6181 aacggagaaa ccgtcgaagt tcccgttacc tgccgcctcg atactgcaga agaagtattg
     6241 gtatatgaag ccggcggcgt gttgcaacgg tttgcacagg attttttgga agggaacgcg
     6301 gcttagaggt cgtctgaaaa gcaagacgta gcgtgggtcg ggttcaacat tttgctcatt
     6361 cacgtaattc tcgatatggc aggcatctac tgtaaatcgt cattcccgcg caggcgggaa
     6421 tccagaaagt ggaattgagg aaaccttatt tatccgatga gtttctgtgc ggacaaattt
     6481 ggattcccgc ctgcgcggga atgacggggt ttaataatct gccgtatcac aacacagtag
     6541 ccgtagattg tggcgaaccc cgacagtttg cggaatcaaa cggctttgtc ggagtggcag
     6601 cctaatgtac ttctggaaag tgggtgtagc gtgggctttg cccgcgaaat aaaggctgaa
     6661 ttgacatggt atagaggatt aacaaaaatc
//
LOCUS       DAWKOX010000115         6461 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.115, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000115 DAWKOX010000000
VERSION     DAWKOX010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6461
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.115"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            150..1691
                     /locus_tag="WJK78_001503"
     CDS             150..1691
                     /locus_tag="WJK78_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ7598418.1"
                     /translation="MDGRRWVVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFLDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
     gene            1720..2319
                     /locus_tag="WJK78_001504"
     CDS             1720..2319
                     /locus_tag="WJK78_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ7598419.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESQIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            2316..2909
                     /gene="nadD"
                     /locus_tag="WJK78_001505"
     CDS             2316..2909
                     /gene="nadD"
                     /locus_tag="WJK78_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ7598420.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRIL
                     SAPMHNVSSTEIRRAGVSDGIPPAAARYIREHGLYEK"
     gene            2968..3354
                     /gene="rsfS"
                     /locus_tag="WJK78_001506"
     CDS             2968..3354
                     /gene="rsfS"
                     /locus_tag="WJK78_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ7598421.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            3408..3878
                     /gene="rlmH"
                     /locus_tag="WJK78_001507"
     CDS             3408..3878
                     /gene="rlmH"
                     /locus_tag="WJK78_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ7598422.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVFLTEQLYRAVSILHNHPYHRE"
     gene            3951..4217
                     /locus_tag="WJK78_001508"
     CDS             3951..4217
                     /locus_tag="WJK78_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ7598423.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            4374..5057
                     /locus_tag="WJK78_001509"
     CDS             4374..5057
                     /locus_tag="WJK78_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ7598424.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            5181..5693
                     /gene="coaD"
                     /locus_tag="WJK78_001510"
     CDS             5181..5693
                     /gene="coaD"
                     /locus_tag="WJK78_001510"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ7598425.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            5725..6378
                     /locus_tag="WJK78_001511"
     CDS             5725..6378
                     /locus_tag="WJK78_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ7598426.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1404 a         1702 c         1859 g         1496 t
ORIGIN      
        1 gcttcgtcgc cttgtcctga tttttgttaa tccactatat ttcagacggc gggaggaagg
       61 cggatacggt atgtagtcgg attgaaatat acggtatgtg ggggcttttg ggtacaatcg
      121 caacatcagt gtttcaagtg gggaaggcga tggatggacg gcgttgggtg gtatggggtg
      181 cttttgccct gctgccttcg gcttttttgg cggtaatggt cgttgcgcct ttgtgggcgg
      241 tggcggcgta tgacggtttg gcgtggcgcg cggtgctgtc ggatgcctat atgctcaaac
      301 gtttggcgtg gacggtattt caggcagcgg caacctgtgt gctggtgctg cctttgggcg
      361 tgcctgtcgc gtgggtgctg gcgcggctgg cgtttccggg gcgggctttg gtgctgcgcc
      421 tgctgatgct gccttttgtg atgcccacgt tggtggcggg cgtgggcgtg ctggccctgt
      481 tcggggcgga cgggctgttg tggcgcggca ggcaggatac gccgtatctg ttgttgtacg
      541 gcaatgtgtt tttcaacctt cctgtgttgg tcagggcggc gtatcagggg tttgtgcaag
      601 tgcctgcggc acggcttcag acggcacgga cgttgggcgc gggggcgtgg cggcggtttt
      661 tggacattga aatgcccgtt ttgcgcccgt ggcttgccgg cggcgtgtgc cttgtcttcc
      721 tgtattgttt ttcggggttc gggctggcat tgctgctggg cggcagccgt tatgccacgg
      781 tcgaagtgga aatttaccag ttggtcatgt tcgaactcga tatggcggtt gcttcggtgc
      841 tggtgtggct ggtgttgggg gtaacggcgg cggcagggtt gctgtatgcg tggttcggca
      901 ggcgcgcggt ttcggataag gcggtttccc ctgtgatgcc gtcgccgccg cagtcggtcg
      961 gggaatatgt gctgctggcg tttgcggcgg cggtgttgtc tgtgtgctgc ctgtttcctt
     1021 tgttggcaat tgttgtgaaa gcgtggtcgg ccggcgaatc gtggcgtgtg ttaatggaaa
     1081 gtgaaacgtg gcaggcggtg tggaatactt tgcgcttctc ggcggcggcg gtgtatgcgg
     1141 cggcggtttt gggtgtggtg tatgcggcgg cggcgcggcg gtcggcgtgg atgcgcgggc
     1201 tgatgttttt gccgtttatg gtgtcgccgg tttgtgtttc ggcgggcgtg ctgctgcttt
     1261 atccgcagtg gacggcttcg ttgccgctgc tgctggcgat gtatgcgctg ctggcgtatc
     1321 cgtttgtggc aaaagatgtt ttatcagcct gggatgcact gccgccggat tacggcaggg
     1381 cggcggcggg tttgggtgca aacggctttc agacggcatg ccgcatcacg ttccccctct
     1441 tgaaaccggc gttgcggcgc ggtctgactt tggcggcggc aacctgcgtg ggcgaatttg
     1501 cggcaacctt gttcctgtcg cgtcccgagt ggcagacgct gacgactttg atttatgcct
     1561 atttggggcg tgcgggtgag gataattatg cgcgggcaat ggtgttgaca ttgctgttgt
     1621 cggcgttcgc gctgggcatt ttcctgctgt tggacaacgg cgaaggcgga aaacagacgg
     1681 aaacgttata atgtgaaccc tttttcagag gacggcaaaa tgagcgagtt ggataacatc
     1741 cttgcccata accggcagtt tgtcgagtcg ggcgaatatg aaaaatactt taccgacaaa
     1801 taccccgaac gcgggctggc agttttgtcc tgtatggatg cgcggattat cgggctgctg
     1861 cccgacgcgt tgggtttgaa aaacggcgat gccaagctga ttaaaaatgc cggcgcgctg
     1921 gttacgcacc cgtggggttc ggtgatgcgg agtcttttgg ttgccgtgtt tgaattgaag
     1981 gtcagagaga ttatggtcat cgcccatcac gattgcggta tgcaggggct gaatgccgaa
     2041 gaattcctcg ggcgcgtccg ggaaagccag attcccgaag accgtatcga aaccctgcgt
     2101 tatgccggta tcgacctcga cggctggctg accggtttcg acaacgtcga agacagcgtg
     2161 cgccacacgg tggaccttat ccgtaaccat ccgctgatgc cgcgccatat cgccgttcac
     2221 ggactggtca tccatcccgt taccggcaaa ctgacgctgg ttgtggacgg cagtgtttca
     2281 gacggcatgg acttatcgga aggaatggaa acatcatgaa gaaaatcgga ctgttcggcg
     2341 gcactttcga cccgatacac aacgggcatc tccacatcgc ccgcgccttt gccgacgaaa
     2401 tcggcttgga cgcggttgtt ttcctgccgg caggcggccc gtatcacaaa gacgcagcct
     2461 ccgcttccgc cgccgaccgc cttgccatgg tcgaactggc gacggcagaa gacgcgcgtt
     2521 ttgccgtcag cgattgcgac atcgtccgag aaggtgcaac ctatactttt gataccgtcc
     2581 aaatcttccg ccagcagttc ccatccgcgc aactctggtg gctgatgggc agcgacagcc
     2641 tgatgaagct gcacacatgg aaaaaatggc agatgctcgt gcgcgaaacc aatatcgccg
     2701 tcgccatgcg gcagggcgac agcctgcacc aaaccccgcg cgaactgcac gcgtggctgg
     2761 gcaagtccct tcaggacggc agcgtccgca tcttgtccgc cccgatgcat aatgtgtcgt
     2821 caacggaaat ccgccgcgcc ggtgtttcag acggcatccc acctgccgcc gcacgctaca
     2881 tccgcgaaca cggtttgtat gaaaaataaa gtcaaatcag taagaaacgg ctataatgcc
     2941 gtctgaaaac atcccgttag gaaaataatg aacgaacaag aactgcaaga cctgcaaaaa
     3001 atggtcgggg tcgccgtcaa cgccctcgaa gacatcaaag ccaaagacat ttccgttctc
     3061 gaaacgcaag acaaaacttc gctgtttgcc agaatgatta tcgccagcgg cgacagtacg
     3121 cgccaagtca aagcactggc caacaacgtt gccgtcgatt tgaaagaagc cggttttgaa
     3181 atcctcagta ccgaaggaga cagcggcgaa tggacgctcg ttgatgcagg agacctcgtc
     3241 gtccacgtta tgctccccgc cgtgcgcgac ttctatgata tcgacaccct ttggggcggc
     3301 gagaaaccga gttttcacgc cggaatgcag aagccgtggc acgcggcaga ctgattcccg
     3361 atgccgtctg aatgttcaga cggcattttc ctgtaaggga gaaagcattg aacattaccg
     3421 ttttggcagt cggcaccaaa atgccgcgct gggttgatga ggccgtcgcc gaatacgcca
     3481 aacgcttcgg acgcgacgtc gcctacgcac tcaaagaaat caaacccgaa aaacgcggcg
     3541 cgggcgtgaa tgccgcccaa ggtatggcgg cggaagaaaa acgcatcctc gaagccgttc
     3601 cgcaaggcgc gttcctcgtc gttcttgacg aacgcggcaa agcgccgacc tccgtcgagc
     3661 tggcggaaca cctcaaaagc tggcggcaaa acggcgaaca cgtctgcttc gtcatcggcg
     3721 gcgcggacgg catgaccgac cgcctcaaac aacaagcccg catgatgatg cgcctgtcca
     3781 gcctcaccct gccgcacggc atggtgcgcg tctttctgac cgagcagctc taccgcgccg
     3841 tttccatcct gcacaaccat ccctatcatc gggaataaga aggcttttgt ccgtatccct
     3901 aatcggttaa aatcaccccg ttatttctga acacagcaaa ggaatccgct atggcacgca
     3961 tggtattctg cgtcaagctc aacaaagaag ccgaaggcat gaaatttccg ccgcttccca
     4021 acgaattggg caagcgcatt tttgaaaacg tatcgcaaga agcgtgggcg gcgtggacgc
     4081 gccaccaaac gatgctgatt aacgaaaacc gtttaagcct cgccgatccg cgcgcgcgcg
     4141 aatacctggc tcagcagatg gagcagtatt tcttcggcga cggcgcggat gccgttcagg
     4201 gatacgttcc gcaataacgg ttttccgttt tgaacacagg ctgtccgaaa ctgcttcaga
     4261 cggcctttaa aatacgccgg acaactttat cttcacgcaa ccggacaaat tttgacattg
     4321 ggcaatgtta aaatccccca ttattcccaa ccgcgctttc aggagcagat gatatgcaac
     4381 acgacgttta cgactacacc gcgcatacgg tttctaaaaa caccgtcctg cagaaaacct
     4441 accgcctgct cggattttca ttcattccgg cagccgcagg cgcggcactt gccgccaatg
     4501 ccggtttcaa tttttacgcc gccttcggtt cgcgctggat agggtttgcc gtcgtgttgg
     4561 cgtttttcta cggtatgatc cacttcatcg agaaaaaccg ttacagcaat accggcgtta
     4621 ccctgctgat ggtattcaca ttcggtatgg gcgtattgat cggccccgtg ctgcaatacg
     4681 cgctccatat tgccgacggt gcgaaaatcg tcggcattgc cgccgcgatg accgccgccg
     4741 tctttttaac gatgtccgcc ttggcgcgcc gaacccggct cgatatgaac gcgctcggac
     4801 gcttcctgac cgtaggtgcg gtcattctga tggtcgccgt ggttgccaat ctgtttttgg
     4861 gtattcccgc actcgccctg accatttccg ccggttttgt cttgttcagt tccttaatga
     4921 ttatgtggca ggtacgcacc gtcatcgacg gcggcgaaga cagccacatc agcgcggcac
     4981 tgacactgtt tatctcgctt tacaacatct tcagcagcct gctgaacatc ctgttgtctt
     5041 taaacggcga ggattgatgc tggtaaaacg ccgtccgact atgccgtctg aaaatgcttc
     5101 agacggcatt ttactttggg catacaatac ggatgcacac gcaccaacac acagccgact
     5161 atgaagccgg gaggaatcaa atgttaccga atacaccgcg ccgcgccgtt tatgccggca
     5221 gtttcgatcc gcccacattg gggcatctgt ggatgatacg gcaggcgcaa tctatgtttg
     5281 acgaactcat cgtcgccatc ggcattaacc ccgacaaacg cagcacctat accgtcgctg
     5341 aaaggcagga tatgttgtgc gatattacta aaatgtttcc caacgtcaga accgatgtat
     5401 ttgaaaaccg atttctggtg cattacgccc gtgaggtaga tgcaggattc atcgtgcgcg
     5461 gcatccgttc tgcttcggat tacgaatacg aacgttccat gcgccatatc aacagcgacc
     5521 tcgcccccga aatatccacc gtattcctca tgccgccgcg cgaaatcgcc gaagtgtcgt
     5581 ccactatggt caaaggactg gtcgggccgg aaggctggac ggaaacgatc caccgctacg
     5641 tgccgcaagc tgtgtacgaa aaaatccttg ccgaacatca acacgaaaat tgaacccttc
     5701 tatttttgca aggcatatat ggatatgttg gaaattttgt tccgccatca agacttcgtc
     5761 gccatcaaca aaccgggcgg catatccgtc caccaagaca gcggcgagac cggactggcc
     5821 cgaacactcg ccatacagtt gggcgtagag cgtgtgtggt tgctgcaccg attggacaaa
     5881 cagaccagcg gcattttact gtttgccctc aacagagaaa gcgcgtccgc ccttagcgga
     5941 cagtttgccg gcaaaagcat caaaaaaacc tatttggcac tatccgaccg caaaccgtcc
     6001 aaaaagcagg gttggattaa aggcggaatg gaaaaatcca gacgcggaat gtggaagttg
     6061 acgcgcaata cagaaaatat cgccgttacc cgattccaca gcatcagtat cgccgaaaaa
     6121 ctgcggctgt tcatcctgga accgcatacg ggcaaaacgc accaattgag agtggcgatg
     6181 aaaagtttgg gcagtccgat tctgggcgac agcttatacg gcggaacaga atccgaaacc
     6241 atgtttctgt atgcatggaa aatacaattt gcctaccaaa accgacaaat cgaaattgtt
     6301 gcacccttaa aaaacgaatg gcagactgaa aatatctctc atgcgctgga agaattttat
     6361 atggcaaaag caggttaata aatataaatt aatttataaa caatatgata aatattttta
     6421 taaaaatttt tcaagaaaac ggttgactgc aaatctcttc a
//
LOCUS       DAWKOX010000116         6414 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.116, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000116 DAWKOX010000000
VERSION     DAWKOX010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6414
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.116"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            90..299
                     /locus_tag="WJK78_001512"
     CDS             90..299
                     /locus_tag="WJK78_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ7598427.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            388..1602
                     /locus_tag="WJK78_001513"
     CDS             388..1602
                     /locus_tag="WJK78_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ7598428.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1689..4268)
                     /gene="clpB"
                     /locus_tag="WJK78_001514"
     CDS             complement(1689..4268)
                     /gene="clpB"
                     /locus_tag="WJK78_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ7598429.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDG
                     LEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4529..5539
                     /gene="trpS"
                     /locus_tag="WJK78_001515"
     CDS             4529..5539
                     /gene="trpS"
                     /locus_tag="WJK78_001515"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ7598430.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFKEIFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAAFTQMLAEGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5545..5886
                     /locus_tag="WJK78_001516"
     CDS             5545..5886
                     /locus_tag="WJK78_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598431.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVSGKCMETDDKGGPVGW
                     AENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6206..>6414
                     /locus_tag="WJK78_001517"
     CDS             6206..>6414
                     /locus_tag="WJK78_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598432.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASA"
BASE COUNT         1540 a         1675 c         1620 g         1579 t
ORIGIN      
        1 cgatttgaat ttttcagaaa atgaagcgga cgtttgggcg gaggcaactt gtttgataag
       61 atagcaatat ttcaaaacgg agaaagatca tgccttatgt caatattaaa gtaaccggcg
      121 gcaaggaagc accgactgcc gcgcaaaaag cggaactgat cggcggcgta accgaattgc
      181 tggcacgcgt gctgggtaaa aatcccgaaa caacggttgt cgtgattgac gaagtggata
      241 ccgataactg gggaataggc ggcaaaagcg tcagcgaacg gcgcaaagag ggcaggtaaa
      301 aagcctgaaa atctcggttt gatgctttaa attccgcgtg aaaaagagta cattcccacc
      361 cattgcccaa aatttacgga acacatcatg gataaatttc ccaagtctgc aaagctcgat
      421 cacgtctgtt acgacatacg cgggccggtt cacaaaaaag cccttcagtt ggaagaggag
      481 ggcaataaaa tccttaaact caatatcggc aaccctgcgc cgttcggctt tgaagcccct
      541 gatgaaatct tggtcgatgt catccgcaac ctgccgactt cgcaaggcta ttgcgattcc
      601 aaagggctgt attccgcccg caaagccatt gttcactact atcagaccaa aggtttgcgc
      661 gatattacgg ttgatgatgt ctatatcggc aacggcgtgt ccgagctgat tacgatgtct
      721 atgcaggcat tgctcaacga cggcgacgaa atcctgattc ccgcgcccga ctaccctttg
      781 tggacggcgg cggcaacgct tgcgggcggt acggtacgcc attatctgtg cgacgaagaa
      841 aacggctggt tccccaacct tgccgatatg gaagccaaaa tcacgcccaa aactaaagcc
      901 atcgtcgtca tcaatcccaa taatccgaca ggcgcggtgt acagcaggga aatcctgttg
      961 gaaatcgccg aactggcgcg caagcacggt ttgattattt tcgccgacga gatttacgat
     1021 aaaatccttt atgacggcgc ggttcaccac cacatcgccg cgctcgcccc cgaccttttg
     1081 acggtaacgt tcaacggttt gtccaaagcc taccgtgtag ccggattccg ccaaggctgg
     1141 atggtgctca acgggccgaa acatcatgca aaaggttaca tcgagggttt ggatatgctc
     1201 tcgtccatgc gcttgtgtgc gaatacgccg atgcagcatg cgattcagac ggcattgggc
     1261 ggttatcaga gcattaacga attcattttg cccggcggac ggcttttgga acagcgtaac
     1321 agggcgtggg aattggtcaa tcagataccc ggcgtatcct gcgtcaaacc tatgggcgcg
     1381 atgtatatgt tcccaaaaat cgataccgaa atgtaccgta tccacgatga catgaaattc
     1441 gtttacgatt tgctggtgcg cgaaaaagtc ttgctggtgc agggaacggg gtttaattgg
     1501 atcaagcccg accatttccg cattgtcacg ctgccttacg tccatcagat tgaagaggcg
     1561 atgggcaggc tggcaagatt cctgcaaacc taccgccaat aaggggacgg tttgtctgcc
     1621 gaggataaaa aatgccgtct gaaacggaga ttcccgtttc agacggcatt ttcaacagca
     1681 ggaacgaatc aggcaaattt cagtctgtcg ccgtcggctt ctaccctgat ttcgctttcg
     1741 ggcgcatagt ttccggcaag cagggctttt gccagcgggt tttcgatttc cgactggatg
     1801 gcgcgtttga gcggacgtgc gccgtaaatc gggtcgaaac cggctttggc gatgatgtcc
     1861 agtgcggcat cggaaacagt caggcgcagg ttttgttttt ccaaacgttt ttccaaacct
     1921 ttgagctgga ttttcgcaat gctgcggatg tttgcctgat ccagtccgtg gaacacgact
     1981 acttcgtcga tgcggttgat catttctgga cggaaatgtt ctttcacatc ctccatcaca
     2041 acttctttta ccgcttcgta atcctgaatg cccatttgtt ggatgtgctg gctgccgatg
     2101 ttggaagtca tcacaatcac ggtattttta aaatctaccg tcctgccttg cccgtcggtc
     2161 aaacgaccgt catccaatac ttgcagcagg atgttgaaca cgtcgggatg ggctttttcc
     2221 acttcgtcca aaagaatcac gctgtacggt ttgcggcgga cttgttcggt caggtagccg
     2281 ccttcttcgt agccgacata gcccggaggc gcgccgatga ggcgggcaac ggcgtgtttt
     2341 tccatatatt cggacatatc gatacgaatc agatgatctt cactgtcaaa caggaagcct
     2401 gccaatgcct tacacaactc ggttttaccc acgccggtcg ggcctaggaa caggaagctg
     2461 ccgtagggtt tattcgggtc ggcaagaccg gaacggctgc ggcggatagc gtcggacacg
     2521 gcacgcacgg cttcgtcttg accgactacg cggcggtgca acacttcttc cattttcagc
     2581 aacttgtcgc gttcgccttc catcattttt gacacaggaa tgccggtcat acgggaaaca
     2641 acttctgcga tttcctctgc gccgacatta ttacgcaaga gtttgtttgc cggttttgtg
     2701 ctgtccgtat ctgcccgttc ggcggctgca cgctgttttt ccaaatgctc caaatcttca
     2761 tacatcaatt ttgaagccag tgccaaatcg ccttgccgtt ttgcctgttc gattttaatt
     2821 ttgacttcgt caatttgttt cttaatatta gcagcaccgt ctgaaatcgc tttttcggct
     2881 ttccagattt cgtccaaatc ggcgtattct ttttccaaac cgtcgatttc ctcatctatc
     2941 agttccaaac gttttttgct ggcatcgtct ttttcttttt caacgtgcgc cttttccatc
     3001 cgaagctgaa tcagacggcg gtcgattttg tccattgctt ccggcttggt ttctttttcc
     3061 atcttgacac ggctggcggc ttcgtcaatc aaatcaatcg ctttatcagg caggaagcgg
     3121 tcggtaatgt agcggtcgct caactccgct gcggcaacga tagcagggtc ggtaatatcg
     3181 ataccgtggt ggatttcata acgctcctgt aaaccgcgca agatagcgat ggtgtcttct
     3241 acacttggct cgccaaccaa tactttttgg aagcggcgtt cgagtgccgc gtctttttcg
     3301 atgtattggc ggtattcgtc caaggtggtc gcgccgatac agtgcaattc gccacgtgcc
     3361 aaagccggtt tcagcatatt gcccgcatcc atcgcaccgt cggttttgcc tgcgccgacc
     3421 aaagtatgga tttcgtcgat gaaaatcaga gtgttgccgt cgtctttcgc caagtcgttc
     3481 aacacgcctt tcaagcgttc ttcaaattcg ccgcggtatt tcgcgccggc aatcaatgcc
     3541 gccaagtcca aaaccagtag gcgtttgttg cgcagggatt cgggtacttc gccgttgacg
     3601 atgcgttgtg ccaaaccttc gacgatggcg gttttaccca cgcccggttc gccaatcagc
     3661 acagggttgt ttttggtacg gcgttgcaat acctgaatcg cacggcggat ttcgtcgtca
     3721 cggccgataa cggggtcgag cttaccgtct cgggcgcgtt gggtcagatc gagcgtatat
     3781 tttttcaaag catcgcgttg gtcttcggca ttggcatcgt tcacgttttg tcctcctcgt
     3841 accgcgtcaa tcgcggcatt gatgttttgt tcggtcgcgc cggcttcttt caaaattttg
     3901 ccggccgcat cgttctgctg caccaaggca agcaggaaaa gttcactggc gatataggca
     3961 tcgccgcgtt tggttgcggc tttgtccatc aggttcaaca ccgcctgcaa ttcgcggctg
     4021 ggcagaatgt cgccgccctg gccggacact ttcggcaggc tgttcaaatg ctgctgcaaa
     4081 cgctgtttca cctgcggcac gttcacgccc gcatgagcca agagcgcggc agcaccgctg
     4141 ttttggtcgt caagcagggc tttcagcaca aagcccgctt ccagatagct gctgtccgca
     4201 gccaacgcca aactctgagc ttctgcaagg gcctgttgga atttggcggt taatttgtcg
     4261 tatcgcattt ttgtttcctt ttcaaaatgt ccgctgtcga agcctatatg tgcataattg
     4321 tggataactc aagttctgtt ttctgttttt ctatatttaa ttcgatatat cattgaattt
     4381 aaagtatata aaaatgtata ataatgtgta taactatatc ttcttaatat ggaaaagtct
     4441 gttgtcggct ggatgtaggt ggcaaatcgg gtataatcgg cgcatctttt tccctttcag
     4501 acggcattga tgccgcaagg acatttttat gagcaaaaaa cgagttctga ccggcgtaac
     4561 caccaccggc atcccgcatc tgggcaacta cgtcggtgct atccgccccg ccgtccgcgc
     4621 ggcgcaaaac cctgataccg aatccttcct cttcctcgcc gattaccacg gtatcatcaa
     4681 atgccacgag ccggagatga ttcaccaatc cacccaagcc gttgccgcca cttggcttgc
     4741 ctgcggactc gaccccgagc gcaccacctt ctaccgccaa agcgacattc ccgaagtgat
     4801 ggaattgaac tggattctga cctgcatcac cgccaagggt ttgatgaacc gcgcccacgc
     4861 ctacaaagcc gccgtgcagg caaatgcgga aaacgggcag gaagaccccg atttcggcgt
     4921 ggaaatgggt ttgttcagct atccgattct gatgaccgcc gacatcctta tgttcaacgc
     4981 caacgaagtg cccgtcgggc gcgaccaaat ccaacacgtc gaaatggcgc gcgacatcgc
     5041 cggccgcttc aatcaccgct ttaaagaaat ctttaccctg cccgaagtga aaatcgacga
     5101 aaacgtcgaa ctcttggtcg gtttggacgg acgcaaaatg tccaaatcct acggcaacac
     5161 cattccgctt tgggaaaacg acaaaaaaac ccaaaaatcg gtcaacaaaa tcatcaccaa
     5221 tatgaaagag ccgggcgagc cgaaacagcc cgacgaaagc ccattgtttg aaatctacaa
     5281 agccttctcc acgccgtctg aaaccgcagc gttcacgcaa atgcttgccg aaggcttggc
     5341 ttggggcgag gcaaaaaaac ttttggcggc gaaaatcaac gccgaactcg ccgaaccgcg
     5401 cgaacgctac aacgagctga ccgccgaccc ttcgcaaatc gaagagattt tgcaggcagg
     5461 cgcgcaaaaa gcgcgtaaag aagcacgcga attgttggac aaagtacgcg atgcggtcgg
     5521 catccgcccg ttgaaataaa cccgatgccg tccgaacctc ttaaaggctt gccggaacaa
     5581 aacgtcgtcc ggctgaccgg caagcatccc aacgacttgg aagccgtcag cggcaaatgc
     5641 atggaaaccg acgataaggg cggtccggta ggctgggcgg aaaacggcgt gtgccatacc
     5701 ttgtttgcca aactggtggg caatatcgcc gaagacggcg gcaaactgac ggattacctg
     5761 atttcgcatt ccgccctgca accctatcag gcaggcaaaa gcggctatgc cgccgtgcag
     5821 aacggacgct atgtgctgga aatcgacagc gagggggcgt tttatttccg ccgccgccat
     5881 tattgaggta ttcggacatc ccggaatata tttgggtttt tcaaaccttg cgaaaaaaag
     5941 tccgcaccgc agggaaactc aaaaggaggg ggatatgtgt tacaattttc cgaactgttt
     6001 tcataaaata gttttcggac gtgtttcaat atggcattga tgccgcctta ttgttcgaga
     6061 aaaaaacctt tatatttaaa tataatgggt tttaactaaa cgggaaaccg ttttctctcc
     6121 ggccgatggg caaaatcagc cgattgatgg aacacggttc gatttttaag caaaacctta
     6181 atcaacaact caagaaggat aagacatgaa aaaattattg attgccgcaa tgatggcggc
     6241 tgccttggca gcttgttcgc aagaagccaa acaggaggtt aaggaagcgg ttcaagccgt
     6301 tgagtccgat gttaaagaca ctgcggcttc tgccgccgag tctgccgctt ctgccgtcga
     6361 agaagcgaaa gaccaagtca aagatgctgc ggctgatgca aaggcaagtg ccga
//
LOCUS       DAWKOX010000117         6382 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.117, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000117 DAWKOX010000000
VERSION     DAWKOX010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6382
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.117"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            175..1233
                     /gene="alr"
                     /locus_tag="WJK78_001518"
     CDS             175..1233
                     /gene="alr"
                     /locus_tag="WJK78_001518"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ7598433.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1297..2652)
                     /locus_tag="WJK78_001519"
     CDS             complement(1297..2652)
                     /locus_tag="WJK78_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ7598434.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVKRGGRIPAPVQSMK
                     N"
     gene            complement(2667..2939)
                     /locus_tag="WJK78_001520"
     CDS             complement(2667..2939)
                     /locus_tag="WJK78_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ7598435.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3065..3802)
                     /locus_tag="WJK78_001521"
     CDS             complement(3065..3802)
                     /locus_tag="WJK78_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ7598436.1"
                     /translation="MKKLSRIVFSIVLLGFSASLSAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAYAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGSKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIHHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4083..4982)
                     /gene="prmB"
                     /locus_tag="WJK78_001522"
     CDS             complement(4083..4982)
                     /gene="prmB"
                     /locus_tag="WJK78_001522"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ7598437.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5127..5720
                     /locus_tag="WJK78_001523"
     CDS             5127..5720
                     /locus_tag="WJK78_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598438.1"
                     /translation="MADGMGNLIGWEKTGLVAGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5832..>6382
                     /locus_tag="WJK78_001524"
     CDS             5832..>6382
                     /locus_tag="WJK78_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ7598439.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIATAAMKA
                     AIPDYMKFGEGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVAKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKGAEAVNNDTEHNAT
                     YFSHFPSKQKSTGGSRCPFLYRFP"
BASE COUNT         1740 a         1604 c         1468 g         1570 t
ORIGIN      
        1 tttgggaaag cgattatatc aggaaaagca aaccgccttc ctacctgaaa actgctgctt
       61 cggcttgaag acacaagggt ctttaatatt ttaaaagcct tgccgttgga ttataattcc
      121 ctaattgatt tcttaatttt gctaataaac acttgcttgg taaggaatga atttatgcgc
      181 cctttgaacg tgcagatcag gttgggcaac cttaggcaca attatcggat tttaaaggaa
      241 atgcacggag gcaagctgtt ggcggtagtg aaggccgacg catacggaca cggtgcggtc
      301 agatgtgctt tcgcgctggc agacttggca gacggctttg ccgtggcgac aatcgatgaa
      361 ggaatcaggc tgcgggagag cggcattacc catccgattg tccttttgga aggcgtattt
      421 gaagcatcag agtacgaagc ggtcgaacaa tactcgctct ggccggcagt cggaaaccaa
      481 tggcaacttg aggctttgct ttcccgccat tggaaaaaac ctgtcaaggt ctggttgaaa
      541 atggattcgg gaatgcaccg taccggattt ttccctcatg attacgcttc ggcatatgcg
      601 gcattgaaac agtcggaata tgtggacagt attgtcaaat tctcgcattt ctcctgtgcg
      661 gacgaacccg aaagcggtat gacggaaata cagatggaag cattcgattt gggtacggaa
      721 gggctggaag gcgaagaaag ccttgccaat tcggcggcta ttttgaatgt tcccgaagca
      781 cgcagggatt gggggcgcgc gggcttggcg ttatacggca tttccccgtt cggaggcagc
      841 gatgacaggc tgaaacccgt gatgaggctt tcaacccgta tttttggcga acgcgtttta
      901 cagccgcact cccctatcgg ttatggcgca acattttata ccagcaaatc tacgcgcgtc
      961 ggtctgattg cctgcggtta tgcggacggt tatccgcgcc gcgctccaag caattccccc
     1021 gtcgccgtcg acggtaaatt gacccgggtc atcggcaggg tctctatgga tatgatgacc
     1081 atcgagctgg acgcttcgca agaaggtttg ggacacgagg tcgaactgtg gggcgatacg
     1141 gtcaacatca atactgttgc cgaagcggcc ggaaccatcc cttacgaatt gatgtgcaat
     1201 atcaaacgtg caaaattcac ttatatcgag taatcgagtc caaacaaaaa tgccgtctga
     1261 agcctttcag acggcatttc cccatcaaaa ccgcaatcag tttttcattg attgaaccgg
     1321 agccgggatt ctgccgcccc gtttgacgaa cacttcgcac gaaccttctt tgaccggcat
     1381 tacaggcgcg tagcctaaca ggccgccgaa ctcgacgctg tcgccgacgg ttttaccggt
     1441 taccggaata atgcgcacgg cagtggtttt gctgttgatc atgccgatgg cggcttcgtc
     1501 ggcaatgatg ccggaaatgg tgtgcgcggg tgtgtcgccg ggaacggcaa tcatatccaa
     1561 gccgaccgaa caaacggcgg tcatcgcttc gagtttatcc aacgtcagca cgcctgcttc
     1621 ggcggcggca atcatacctt cgtcttcgga aacggggata aacgcgccac tcaaaccgcc
     1681 aaccgcgctc gaagccatca tgccgccctt tttcacggca tcgttcagca atgccaaagc
     1741 tgctgttgtg ccgtgcgtac cgcagacgct caaacccatt tcttcaagaa tgcgcgccac
     1801 cgagtcgccg acggcagggg tcggtgccag cgacaagtcg agaataccaa acgggatatt
     1861 cagcattttt gaggcttcgc ggccgatgag ttcgcccacg cgggtaattt tgaaggcggt
     1921 tttcttcaca acttcggcaa cttcggtcaa tgtcgttgca tccgaatttt ccaacgcggc
     1981 ttttacgaca cctgggccgg atacgccgac attaatcaca gcatccgctt cgcccgatcc
     2041 gtgaaacgca cccgccataa acggattgtc ttccaccgca ttgcagaaca cgacgatttt
     2101 cgcgcagccg aaaccttcgg gcgtaatttc agccgtgcgt ttgatggttt cgcctgccag
     2161 cttgaccgca tccatattga taccggcgcg cgtactgccg acattgatgg agctgcacac
     2221 gatgtcggtg gtcttcatcg cttcgggaat ggaacggatt aacacctcgt ctgaaggcga
     2281 catgcctttt tgcaccaacg cggaaaagcc gccgataaag gacacgccga tggctttggc
     2341 agccttatcc aaagtttgcg ccacgctgac ataggaatcg gcatgggtag ccgccgcgat
     2401 ttgggcaatc ggcgtaacgg aaatgcgctg attcacaatc ggcacgccgt atttggcaga
     2461 cagatatttt gccgtcgcca ccaagtcttt gccgaccgtg gtaattttgt tgtaaatgtt
     2521 ttggttcaac acattgatat cgctgctgat gcagtcgtgc agatcaatgc cgatggtaat
     2581 ggtgcggaca tcaaaattct ggtcggcaac cattttgacg gtttctaaaa tttcgccgga
     2641 ttggatactc atcacattcc tccgactcaa atgcggtgca tcgcttggaa gatttcttca
     2701 ttttgcatac ggatatcaag cgcgagtttt ttgctctctt ccgcaaacaa atccaaaacc
     2761 tcctgccgag atttggggca tttcgaggta tccaccaaga taatcatggt aaaaaaatca
     2821 tccatcagct gttggctgat attgaggatg ttgattcggt tttccgccaa aattttggaa
     2881 acatcgtaca cgatgccgac gcggtcttta ccgatgacgg tgatgactga attgttcaca
     2941 ggcttactcc ttgcagatat ccgttaaagt ccgaaattat accaccgttg gattttgaag
     3001 aaatattgtc aacaatatat acatacaaaa tgccgtctga aactatttca gacagcatca
     3061 agattcaggg ttcgattaaa taaccatcct tatcccactg ggttttcctg accaacttgt
     3121 catcctgata aacagcttca ctctttttag aaccatcttc ataccactct aagactactc
     3181 cattacgttt atgatgatgg atagacagtt ccgagagtaa tcgaccgctt tcatcccatg
     3241 tcagaatctt ggccggctca tcattgacca taaccatttc cgttttgata ttgccatcag
     3301 cataccattg tttccatacg ccgtttgcct tattttgttt aaactggatt tcgctttcct
     3361 tgctgccatt acggtaatag cggtaccccg taccttcact caaaccattt ttataaggca
     3421 taaccgcaga ttttttaccg ttcggatacc agttgaccca ctcaccgtcc ggcttaccct
     3481 tgctgaagcc ccccgccatt tttttctgac cattaaaatg ccacaaaatc aacataccgt
     3541 tttgcagggt aggcacaaaa gatttgattt gcgttgaagc aacgatataa ggttcggaat
     3601 atttcttcat cgacggataa taaaaatcct gcgcgtacgc aataccctcc gccacactat
     3661 attgcctgat ataagcggca gaagacatcg tcgccgtcag tttcccgttc tgattaaaat
     3721 aaacagaata ggtctgtgcc gataaagaag ccgaaaaacc caacaggaca attgaaaata
     3781 caatccgaga taattttttc attgcaatag cgatataaaa acaaggctgt gttttagtaa
     3841 tctgttgatt tcaattattt gcaagggaaa agacaattat tttccggtta ggaataaacc
     3901 tattctactg aatatattga agccaagtac gcctatcaac actatattaa aacactgcca
     3961 aaaacaatta acttataaac aatatggtaa ggatttctct gccaagcatc aaacccgaga
     4021 caacgtatcg taaaaatgcc gtctgaaaac aaatcgtctt cagacggcat ttccccttca
     4081 actcactctt cacccaataa ctgctcgcgc gtcaagagga aaacaaaacc gtcgcccccg
     4141 ctggtttcca accaagtaaa aggcaactcc ggatacgctg cttccaatac atccctgtta
     4201 tgcccgattt ccaccagcaa tacacctttg ggattcagaa actttgccgc attcagaaga
     4261 atctgcctgg tggcatccaa cccgtccgcc ccgctgccca atgccaattc cggttcgtgc
     4321 aaatactctt caggcaataa ctcaaccgat tccgcatcca cataaggcgg attggaaaca
     4381 atcaaatcat aagtgccttc caatccttca aacaaatccg tatgaataag ccggatgcgt
     4441 tcttccaaac cataatcttc gacattaatc cctgccactt ccaaagcatc caagctcaca
     4501 tcaaccgcat caatttgggc atcaggataa tgatgcgcca tctgaatggc aaggcaaccg
     4561 cttccggtgc aaagatccaa agcattatgc accaactcat cgtattctat ccaaggacga
     4621 agtccgtcac ccaacaattc ataaataaaa gaacgaggta tgattacgcg ctcatccaca
     4681 tagaaatcaa actctccctg ccatgcctgg tgtgtcaaat aagcggctgg aatgtgttcg
     4741 acagcacgac gctcaataac cgtcagcact tcctcttttt cagcttccaa gagttttgca
     4801 tcaagatatg gggcaagcat atccaaaggc aaattcaaag tatgcagaat caaataagct
     4861 gcttcatcat gcgcattatc cgttccatga ccaaaaaaga gccctgcctc attaaaacgg
     4921 ctgactgcaa aacgtaaaac atcgcggata gtcgtcaatt cttgtgctgc ctgattaaac
     4981 ataatatgaa ccattctgcg tatagatact tttaattata acagaaacaa caagcaaacc
     5041 ttttcatatc gccaaataac cacccaatct acccatacaa ctacataaat gcccgcgcga
     5101 aaaccatcgc ccgaacggaa acgacaatgg ccgacggtat gggcaacctg attggctggg
     5161 aaaaaacggg gcttgttgcc ggtaagcagt ggataaccgc aaaagacgac aaggtgtccg
     5221 atgtctgcaa tgccaacggc gagatgggcg taatcgggct ttacgagcct ttctcacacg
     5281 gcgcattgac gatacccggt catccgaact gccgatgcga ggttgtttcc gtatcgggtg
     5341 gcgaattggg ggaatttgcc gaaaaaaagg agcttcgtaa agcggctatg cagtatgcgc
     5401 gggataactt tatcggcaaa agctatgtca atgaaaacag cgggcatgaa ctgaaggtaa
     5461 cttggcaagg tgtgaaacac gctgcgtcaa aggcaaatca ggcggaatta tccatcatga
     5521 caaaacttga tgacttattg cgctacgcaa aatatgaggg ttcttattcg gataggaaag
     5581 gtcatcctaa tattattgca gcacataagt atcgtgccgt tgccaaggtt gggaatgagt
     5641 ctttaaatat cggtgtgatt gtaagggaat ttccagacga ccataaacat tacgaccatt
     5701 tcatcttgaa ggatgaataa agcccttttg cagtgtcgtt ctggagcgga tagcgttaag
     5761 gcaagtacac ttccagcctt gaaaaagggc tttaaattca gcatgccatt tatacaggca
     5821 ggagtaaacc catgacaaag ttatacgcag aaatcgccaa gatggagacg caggacgacg
     5881 acacggtcaa ggtttggggt tacgcttcaa gcgaggaaat cgattcggac ggcgaagtca
     5941 tcgcgacggc agctatgaag gcggcgattc ccgattatat gaagtttggc gaggggcgcg
     6001 agatgcacgg ctcaaacgct gcgggaacgg caattgaaat caacgttgaa gacgacggca
     6061 taaccttttt cggtgctcat atcatcgacc ccgttgtcgt ggcgaaagtc aaaacaggcg
     6121 tttacaaagg cttttccatc ggcggcagcg ttaccgcccg cgatgatttg aacaagtccc
     6181 aaatcacggg cttgaagctg acggaaatca gccttgtcga ccgccctgcc aatcccgatg
     6241 cggtgtttac ctgctttaag gcggacaaag gtgcggaagc ggtaaacaac gatacagaac
     6301 ataatgctac atattttagc catttccctt ccaaacaaaa aagcaccggc ggcagccgat
     6361 gccccttcct ttacaggttc cc
//
LOCUS       DAWKOX010000118         6340 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.118, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000118 DAWKOX010000000
VERSION     DAWKOX010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.118"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(50..1342)
                     /locus_tag="WJK78_001525"
     CDS             complement(50..1342)
                     /locus_tag="WJK78_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ7598440.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIALTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            1419..2387
                     /locus_tag="WJK78_001526"
     CDS             1419..2387
                     /locus_tag="WJK78_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598441.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSETVALATPVWQKMGMHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWGGTNGGTQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRIGKIKRLDIATDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(2588..4054)
                     /locus_tag="WJK78_001527"
     CDS             complement(2588..4054)
                     /locus_tag="WJK78_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7598442.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFENRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(4296..6340)
                     /locus_tag="WJK78_001528"
                     /pseudo
     CDS             complement(4296..6340)
                     /locus_tag="WJK78_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374912.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         1320 a         1920 c         1631 g         1469 t
ORIGIN      
        1 cctgtttgca gattttcaga cggcattgtt ttcgtcgccg gttcaaactt caatccgatt
       61 gcgacacggt aaccggtatg ccgcgcaagc gcgcaagcag cgcgtccgcc ttctgtttct
      121 gcgcggcaaa cgccgccttg tccgcctgcg tcaattcggg tgtcggcaat gcgactgaaa
      181 caggattaac gggctgcccg ttgatgcgcg cctcgtaatg caggtgcggc ccggtcgaac
      241 gcccggtcga accgacaaaa ccgatgacct cgccgccgcg cacattgcct tgtgcctgcg
      301 aaaacgcgct caagtgcgcg tacagcgttt ccacgccgtt ggcgtggcgt atcatcaccg
      361 cgttgccgta tccgcccttc cggcctttaa aggtaatcac gccgtcggcg gaagccctga
      421 ccggcgttcc ctgcggtgcg gcataatcga tgcccgtgtg cagccgccat gtgtgcagga
      481 tggggtgcat acggtagccg aacggcgaag aaatgcgcgt atagaccagc ggctcgatgt
      541 tgaagccgcc tttttcctgc aacaccctgc cgtcttcatc ataataattg ccgccccctc
      601 cgccttcctt gtccgaacgg taatagaatg cctgatgcct tgtgccgccc ttaacgactt
      661 cagccgccaa aatatcgccc gccgccacct gctgcccgtg gaaatacagg ctgtcgtaca
      721 tcaggcgcac ggcatcgcct tccttcaaac cgtcaaggct gaagcggccg gcgaaaatcc
      781 cgcttaagga ttcgcggatt tcgacgggca cttccgcccg cgccagcgaa ccgcgcgccg
      841 acgttttgac cacgaccgaa cgcagcgtcg gcaaaacctt catatccgcc tcagaagccg
      901 accgccgcca tatgccgcct ttcttttcca aagcgaccag attgcgctcg ccgtcttcgt
      961 cggtaaaaaa ctgtacttcg cgcgcgccgc cgtcgccgcc gaccaaaaca tgaaccgact
     1021 ggtcggcacg caaatgccgc aaatcggctt cgccgccata tttttccgtg attcgggcaa
     1081 tctcgtcccg cgccataccc gaacgcgcca gcacgtccgc cagcgagtcg cccggctgca
     1141 ccgcctcctg cacccaatat gccgtctgaa cgccgctgcc gccccaagac agcggcggca
     1201 gattttgttc cacgcgctgc ggtctgacgc gttccgtcct ctctgtcaaa gcaatgtatg
     1261 ccgccgacac caaaataatc gaaacggcaa gcgcgcgcag cgcgtatttc cgatgttttg
     1321 ccgaaagtgg gaagacagcc atattgttcc tttttgacgg cgtttgcgcc gaatcctcta
     1381 taatatccgc ccgatccgca tttgtcagac atcaaacgat gaaactcacc ctcgccctcc
     1441 cctcgctcaa tttggatgaa gacgaaatcc gaatacctct atgcctgccc gccttcaaca
     1501 aaatcctgca atacggctcg ctgcaccgcc aaagctgcac ggcttcggca ttttacgcgc
     1561 gttatttgtg gtgcggcaga ctggcggaac gcgcggcgca aagcctgaat atgccgtctg
     1621 aaaccgtcgc gctcgccacg cccgtctggc aaaagatggg gatgcatcag gcaaatgtgc
     1681 tgacggcgga atatttggat gtcggtacgg atgaagcgga acggctctgc cgcgatctgt
     1741 cggcgtttta cggcgatatt ccgtggcgtt tcgttcccgt cctgcccgaa ttatggctgg
     1801 tttcccttcc ccgcgcgtac cgctggggcg cgaagcccgt tttggacttg ggcggattgt
     1861 tgggcgcgga cgatcagccg gacggagaag atgcgttgga atggctgcgc gtccaaaccg
     1921 aaatccaaat gtggctggcg gcgcaccccg tcaaccataa ccgcaagaaa cgcgggctgc
     1981 ccgagttgaa cggcttatgg ctttggggcg gcacaaacgg cggcacgcaa ggcggcacgc
     2041 ttttcgccga tacggtttgg agccgtttcc accccgaccg ccgcgcattg cccgacaact
     2101 tccgcgccta tgaagaaacg gcggcacacc tgcccgacac gcaccatatc ctgtttatgg
     2161 acgatttgcg cctgaccgcc ctgacagggg acagggagcg gtatgcggca atattgcagc
     2221 agtgggaaga acgctggttc gcaccgcttt acgaagccgt ccgcatcggc aaaatcaaac
     2281 ggctggacat cgccacggac ggacaacacg gcggtacgct gaccttcaaa cccgccgaca
     2341 ggtggaaatt ttggcgcggc gcgaaaacct ttgacggaat ctggtgaacc cgcccgccgc
     2401 aaccgcgaca atgccgtctg aagcccgaat cgggtttcag acggcatttt acctcgcatc
     2461 gccgttatgc cggaaaaacc ggaatgcgtt tccgcacacg cggcggcacg caaagcaccg
     2521 cccgaaagcc gccgatgccc gccgtgatac cgccgccggc agggtttcct ccgaaaagga
     2581 acagcaatca gaacgtttta ttaaactcga caaacgcccg atttttctcg tattcgttga
     2641 acacatcgtt actccgcgtt tcgcggtgcg acaacgtcag gcgcggcgtg atgcctttga
     2701 aatgcaatgc ccggtgccaa aggctcaagg atgtgttcaa ttctttatcc ctgcgccttt
     2761 cccctttaaa accgctgaaa aagccgggtt tttcataatg ccgtttcgcc gcgccgaggc
     2821 gcaacagcga agacaggccg ctgccgcccc attcctgccc ccaggcaaag cgcaggccgt
     2881 aacggttgaa attgtcgccc cggtcggcgg ggttgcgctc gcggtaaaaa tccaaaccgc
     2941 ccatccaata ttggcgcgca ttccggtaaa acaccagcga attggaaatt tgcaaatggg
     3001 tattgtcgga acgcgcccgg cgcgtattct tcaaacgccc ccactccgcc gaagacaacg
     3061 tttgccattt cggggtttgc caacggttga aataaaggcg tgcgccgttg gtgtaagaat
     3121 aagcgtcgtt gccgtaggtg cggcgttcgt ggaacactgc cagcccggca tctttgcgcc
     3181 ggtcggcaaa accgatgccg ccggaaacgc ctgccgtcat atcgttgaat ttcttattcc
     3241 ccggataaac cctgccggac acgtcgccgc ccgccgtcgt gtaccagccg tttttcagcg
     3301 accatttttt ctccgcgccg agccggtaat tgaccgccgt gccgtccacc tgtttcggga
     3361 aagtccattt gccgtactgc tgccgtttcg gggcttggtt gatattgtgt tcgcgggtga
     3421 cgctgaagcc gccatttacc ttccacgcat cgcgttcgcg caatgccttg cggtacagct
     3481 cgacctgctc catcagctgc ggcggcaggt tttccgcctt caggcggtcg aactggtctg
     3541 ccgccgcctc gttctgcctg ttttcaaaca atgccgccgc caaacgcata cggacggcgg
     3601 gcgcgtcggg ttgggcggca atcaattccc ggtaatggga aatcgcctcc ttcaccctac
     3661 cgtctgcctg cgccaaaatc ccttgtgcat aaagtgccaa catcttatcc tgctgcgcct
     3721 gttgtaggta aatcggcaaa ataacgcgga taccggcaat attgtttgag accactgcgg
     3781 aatacatcgc gcgggacaac aattcgggat ttttcagcag ggtttctccg tcaatctgca
     3841 aaacttttcc tttttcccgc acctgccccg gtaccttctc cctgtcgatt ggtttgacct
     3901 ccgcttcatg aagcctgaac tcgggacggc ttctcaaatc cggttcgcgc ggtgtttctt
     3961 cggcatatgc cgcgcttgcc aataaaggca gcagcagcat ccatctgttt cgtgcaggca
     4021 taaatgtctt cccacaaaaa taaaaaataa ccattatcaa tcggcggatt gtatcagttt
     4081 tttatgccgc tgttccaaac cctgccgccc gatgccgcga caatgccgtc tgaagccaga
     4141 atcgggtttc aaacggcggc aaaaaaccgg cggttttccg ccggtttcat catgatgccc
     4201 cgcccttcgg ggcggcaggg ttcggattgg tttgcggggc ggcgcgcggg gccgtgccgg
     4261 tgtgccgcct gtgcgtcaaa acatttcccg acgcatcaaa acagccattt gagcgacaat
     4321 gcggcttctt tgtcgccgtc cgtccttttg ccgtatccga tgcgtgcgga catatggcct
     4381 ttccaaccgg cttcaatgcc gaaccgccct tcgagcgccg tcctgcctgc cagcgtctgt
     4441 ttttcgccgt ccatttccac gccgaaagat tttgacctgt gcaaaacatt aaaagcggcg
     4501 aaaggctgaa gattgacacc gttacgcaaa gcaaaacggg tttttgcccg aataccggcg
     4561 cggctttgcc actgaccgct gccgagcagt ccgaccgccg tcccctcgct gtcggtaaag
     4621 ccgccgttta cgcccaagta ggtaaactga gcctgcggtt gcaggtaaaa ccgcacatta
     4681 ttgccttttc cgacaacgcc ttccgccaca agcgcgttgt agccgccttc gacagaagcc
     4741 gtccaacctt tggttttgta gcgttccaca cggttttcat cattgatgcg gtgtttgaaa
     4801 cgttggtatt gcaaccagcc gtccaaatac gcacccgttt gtttatcgcg caactgatgc
     4861 cacgcagcat aaacaccccc gccataacca tgcaaataac tgcctgccgc accgcctttg
     4921 ccgttgactg atgcgtgctg gccggccctg ccgcccatca cgccgattgc cagccggctg
     4981 ccttcatttt gccgtacaaa cacctcgccg ccgatttgca cgcctttgcg ccgcccgtcc
     5041 gcagccgcgc cgccccgtat attttgatgc gaccggccgc cgatgaagcg cagccacaat
     5101 ttttgacggg acggatcggc ggcatacacg tcgtctcccc tgtcggcggc acgcagccca
     5161 aacaaagtat ttgccgcata agcctgttgg gcatataaaa ccgcttccgc ctcggggata
     5221 gccaaacgct gcacgcccaa gcaaaatccg ccttcgcatt gcttgagcaa taattcgtac
     5281 agtccctgcc ggtaattttg tttaaacgca aacgaattag ggtctgcctt ttccgccgca
     5341 atcagtttgc gcccgtcgag cgttttcaga ttttccggcc ggcgttccaa aaccacgccg
     5401 gattgtccgc tgactttgtc ttcaaaggtc agggcgggtt cgtccgactc ccgcacgtcg
     5461 tagccgaaca ggaaatccgc gccgccctga tacgctttat ggacggtcag tttttcatct
     5521 ttcgtgttca ggcggatccg ggcattatcg gaagtttcca gcatatggat gtcggaatgg
     5581 cggcgcggtt cccaaaggga atctttcagc gtcatcttgg tcagttccaa cacctgtccg
     5641 gcgacgtggg atttgttttc gattttgacg tgtaattttt tattgaagat gttgttgaga
     5701 ctagtctgtg atgtattact atgaggagtg agtacggaat cttctaccaa tttattaatt
     5761 aaatcggggt ttttctgttt gagtatacta aattttggtc caagctgttc tatatacgcc
     5821 tcctcagtcc gttttttatt ttcttcccaa gcttcgggtc ttgttttgta taaatcctgt
     5881 aattgcttct taaccgcatc ctttaaatta tccccgtaag tatctgtaat atatttctta
     5941 acaacgggca tattatcgac ggcgagtatg ccgctattgt agtttttacc ttggatattg
     6001 atttcgtcat acccatattc ggatgaattt tgatcggttt taccgctgga aaaataatgg
     6061 gaagtgccgg gtttcggctt gtctgaaaat gaaaaatcgg catcgtcgcc gattttggta
     6121 gaacgagtat ttgaaccaag ctgagctctg aacataccga agcaatcaaa agatatgctg
     6181 cacgggccgc gccaaacgtg ggaatttctg tcttccgccg cttctaaaat aaatttgttt
     6241 ttaatctcgg cttctttgac gggatcgtac gcatccgaac ctcaaacata tggcgtgcaa
     6301 aacagcgata aaacagataa tgttaataga ttaacccgac
//
LOCUS       DAWKOX010000119         6258 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.119, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000119 DAWKOX010000000
VERSION     DAWKOX010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.119"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(391..825)
                     /locus_tag="WJK78_001529"
     CDS             complement(391..825)
                     /locus_tag="WJK78_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ7598443.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(828..1490)
                     /gene="exbB"
                     /locus_tag="WJK78_001530"
     CDS             complement(828..1490)
                     /gene="exbB"
                     /locus_tag="WJK78_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ7598444.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            complement(1556..2398)
                     /locus_tag="WJK78_001531"
     CDS             complement(1556..2398)
                     /locus_tag="WJK78_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ7598445.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            2653..3291
                     /locus_tag="WJK78_001532"
     CDS             2653..3291
                     /locus_tag="WJK78_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ7598446.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            complement(3743..4543)
                     /locus_tag="WJK78_001533"
     CDS             complement(3743..4543)
                     /locus_tag="WJK78_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ7598447.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTMAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(4679..5182)
                     /locus_tag="WJK78_001534"
     CDS             complement(4679..5182)
                     /locus_tag="WJK78_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598448.1"
                     /translation="MDAFDFFMQGNFKKIATEQGLDRKYFIFQYIVCNLSAISSFCLM
                     KIIHTYTILYILIAVIGIINGFLLRSKVLSIVKNKQKFLSDMFPLEMPFFFVEYKIPI
                     LARFLNRGMKWLYLPSFFCLVAICFSIYILNEEGGWMPYFACYWFGLCYPVSTYYVFL
                     SRDYKHI"
     gene            complement(5519..6160)
                     /locus_tag="WJK78_001535"
     CDS             complement(5519..6160)
                     /locus_tag="WJK78_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ7598449.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIEWPQKVMGYLMTMSEKSGVPLYFDRAL"
BASE COUNT         1670 a         1566 c         1295 g         1727 t
ORIGIN      
        1 ggtatagcgg attaacaaaa accagtacgg cgttgcctcg ccttaactca aagagaacga
       61 ttctctaagg tgctgaagca ccaagtgaat cggttccgta ctatttgtac tgtctacggc
      121 ttcgttgcct tgtcctgatt tttgttaatc cactataaaa attagaaatg cacattttca
      181 ttattctcgc gcaggcagga ctccagactt acccatttca gtaatgtttg aaaataaaag
      241 aaaaatcaga tgtttgtatt cccgcctgcg cagaaatgga gacggtgctc tgtcgtctca
      301 tttttgtttt aatcaactat atatagctga ttaaacataa gaaatgccgt ctgaaagact
      361 ttcagacggc attcgttcaa gcgtcgaact ttattgcgcc ttggtttcgg ttacaaaacc
      421 gattttggtg attcctgcct gacgggcggc ttctaaagct ttgtttacat aatcgtattc
      481 caccgccttg tctgccgcaa tcgccacaat cacgttttca ttctgctcct tggcggcttt
      541 cagacggctt tccacttccc cgatttccac tttgcttgca gaatccccgc cgacataata
      601 gccgccgttc gcatcaatcg tcaggcgcag ggggtcttta ggctgtttgt cctgcttgtt
      661 tgtctgctcg gacgcggtcg gcagttccaa agggatggaa tgcgtcagca ccggcatagt
      721 aatcataaac acaatcagca acaccagcat cacgtccacc aacggcgtaa cgttgatgtc
      781 ggacatcgga gaatcgtcgc cggaattcat cgaaccaaat gccataatca gctatccttt
      841 tgattaagca ggcggacgtg caaatcgtgc gccatcgcat ccaaatcctg ggtcagtatt
      901 tttgtgccgc gattgaggaa gttgtatgcc aacaccgccg gaatcgccac gaacaaaccc
      961 gccgccgtcg ccaccagtgc ctcgccaatc gggccggcaa ccgccgcaat actcatctgc
     1021 ccgctttgcc cgatattgat cagggcgtgg taaatccccc aaaccgtgcc gaacagcccg
     1081 ataaacggcg cggtcgcgcc gatggaggca agcgcggtca tcccgtaatc aaaccggcgc
     1141 ataatctgcg ccatactgtt gcggatttga atgaccaaat actcgttcaa cggcaaagcc
     1201 tgcgccagtt cggacgcttc gtttcggcgg tagttgcggt aagactgcaa tgcctcttgc
     1261 gccagtttgg acaaaggcgc atcgacggcg cgcacttttt cgaccgcgtc gttcagcgac
     1321 aaagtatcgc gcatatgccg tttgacggcg gcattccctt tgcgcgcccg atacagcttg
     1381 atgcagcgca agacaaccaa acaccacgtt acgatactca tcaacagcat caacacaaac
     1441 acaccgatca ggacgggatc gcccgattca aatactaatt tcaaattcat aatgattcca
     1501 acactgaaaa aaccaatcaa acatccaagc tgccgcaaac cgctgcggca accgcctaat
     1561 tcaattcaaa cttgacgggg actttaaact ccgtccaagc attggcttga aaatgcccgt
     1621 tttgcgccgc cttgcgtgcc gcattgtcca accgagaaaa accactgctt ttcacgattt
     1681 taacggactc gacatgaccg cccggagaaa ccaaaacgct caaaacaacc gtaccctgct
     1741 cgtcattctc catagaaagc gtgggataag ccgggcgcgg aatgctgccg ttggcgcgta
     1801 aaggattgcc tttgctgctg ccggctcctt ccccgtgttc gcctttgaca ccgccgctac
     1861 ctttaccgct gccttctccg cgccccgttc cgtctccttt ggtaccggtt cccttatctt
     1921 ccccattacc ctgctcgctg tctgctttgg cagaagcatt gctgggatgt tcggcaggtt
     1981 tttcagacgg cttctcgacc ggtttttccg ccggtttcgg gacaggcttc gcttccggct
     2041 taggctctgg tttcggtttt tcttcgggtt tcggcttttc ttcaggtttc ggctcttcct
     2101 taggctgctg aatatccgca tccgcctttt tcgtaaccac cggcttcaaa accggcttgg
     2161 gcggctcgac aggtttgggc ggctcaggct caggttgcgg ctcaggcgca gcaggcgcac
     2221 ctgcgccttc gggtgcaccg tcccctccgc caaaatcacc caaatcgaca aattcgataa
     2281 catttcctga ctctatcacg ggcagcttgt gcgcctgcca gagcaatgcc accattgcca
     2341 aatgcagcag tgcgacggaa aacacgactg cgggggttaa aattcgttct ttatccataa
     2401 ttcgggcata ataatagcaa caattcctat ttgcaaccta tttttacaat ttttggtcat
     2461 atgaatgtct gttccgttca caggcaaacc gtgtttaaac gctgtattac agcaaatcat
     2521 cagataacgg gccggcagaa aaaatgattc cgtctgattt cttattccaa taaaatcagg
     2581 ttagatgata tattgccgct tctgtctgtc agccgtttcg ggctgcacac cacatctgtt
     2641 caaaggaaaa ccatgtttca aaattttgat ttgggcgtgt ttctgcttgc cgtcctgccc
     2701 gtgctgctcg ccattaccgt cagggaggtg gcgcgcggct atacggcgcg ctactgggga
     2761 gacaacactg ccgaacaata cggcaggctg acactgaacc ccctgcccca tatcgatttg
     2821 gtcggcacaa tcatcgtacc gctgcttact ttgatgttca cgcccttcct gttcggctgg
     2881 gcgcgtccga ttcctatcga ttcgcgcaac ttccgcaacc cgcgccttgc ctggcgttgc
     2941 gttgccgcgt ccggcccgct gtcgaatctg gcgatggctg ttctgtgggg cgtggttttg
     3001 gtgctgactc cgtatgtcgg tggggcgtat cagatgccgt tggctcaaat ggcaaactac
     3061 ggtattctga tcaatgcgat tctgttcgcg ctcaacatca tccccatcct gccttgggac
     3121 ggcggcattt tcatcgacac cttcctgtcg gcgaaatatt cgcaagcgtt ccgcaaaatc
     3181 gaaccttatg ggacgtggat tatcctactg ctgatgctga ccggggtttt gggtgcgttt
     3241 attgcaccga ttgtgcggct ggtgattgcg tttgtgcaga tgttcgtctg actggctttc
     3301 agacggcata aacgctccag aaaacgcggc aggacatatt gccctgccgc gttttcctgt
     3361 agtgtaatct tatttttttc atcattatta gaaccaagtt gcatgataat acctttcatt
     3421 aactgaaaca ctgattaaga aactccagtc tgtctaatga tgaggttttc acatcgccaa
     3481 aacttgccaa tcaaatgctg gatttattgc cgtctgagat ttggtcaaat ccaaaggcga
     3541 cattcttaga ccctgtgtgt aaatcagggg tatttttgcg tgaaatcgtc aaacgcttgg
     3601 atgaaggctt gaccaatcaa ataccagata aacaaactcg cattaaccac attttaaaaa
     3661 atcaagtttt tggaagtact gccacgtatg taggtagctt tgaccgatat ttgcataaaa
     3721 actcctttgc tggtgaaagg aattattttg ccaattttaa aatatttctg gcaccaaata
     3781 gtacaatgac aaagacaatc atgccaatga ttaaatcagg atagctagaa tgagtcaata
     3841 acgtcaatgc tcccgccgct atcacaccga tattgatgat aatgtcattg gatgtaaaaa
     3901 tcatgctggc tttgatatgg atttctttat tttgattttt gctcagtaga tataagcaca
     3961 gccagtttgc aatcaatgcc aaaaatgccg tgccaatcat cagttgataa ttgggcagct
     4021 gctcagcacc gataaaacgc ctaatcactt ctatcacccc aaataacgcc aatattatct
     4081 gcgttatccc cgccaaaaat gccacacgtt ttttatacgc catcgtcata ccaatggctg
     4141 atagcgccaa tatatagaca aagctgtccg ccagcatatc tagactatca gcaatcagcc
     4201 ccatagaatt agcaaaaata ccaaccgaac actctatgat aaaaaacaca aagttaatca
     4261 tgagcacttg atataataat cttttttcta agtgctcatc aggcttgtta aacactatct
     4321 tatcaacaat cacttcggtg gaaatgatat gactatcaaa attaagcggt tcaagtactt
     4381 gtaaaatcgt tgtatcttga ttatcgtgat agacggttaa gcaccgccca gcaatatcaa
     4441 actgtaattc ataaatatca gacacatctt ttaaacgcat gcgaatgagc tgttcttcgg
     4501 acgggcagtc cattttggta atgttaaaaa tggtcttttt catctattta gttccttgtt
     4561 ttgatcaggt tggctcaaat aaatctgtgt ttatattgct gcttggtaat ttttggatgg
     4621 tttgagtaaa ttgattaggt taaaatttac ctttggaagt accgccacgc ataatagttt
     4681 agatatgttt ataatctctg gataaaaaaa cgtaataagt gcttactgga taacaaagtc
     4741 caaaccaata gcaggcaaaa taaggcatcc accccccttc ttcattaagg atatatattg
     4801 agaaacaaat cgcaactaaa cagaaaaaac ttgggagata aagccatttc attcccctat
     4861 tcaagaatct agccaagata ggtattttgt attctacaaa aaagaaaggc atttccaagg
     4921 gaaacatgtc agataaaaac ttttgtttat tttttactat agatagaacc ttgcttctca
     4981 agagaaagcc attaataata ccgatgacag ctattaatat atagagaata gtataagtat
     5041 gaataatctt cattagacaa aaagaagaaa tggcagataa attacatacg atatattgga
     5101 atataaaata tttacggtct aaaccttgtt cagttgcaat ttttttaaaa ttgccttgca
     5161 taaaaaaatc aaaggcgtcc attaaactat ctttcacatt agaaatttaa aagctaaata
     5221 atacgacaaa caatgtgaag tactattcat ggtttattta aaaaataata ctattctgaa
     5281 cattatttag atacagaaat taacaaatta gaactaaaca agcttttaaa tactttaatt
     5341 ttattggaaa gctataaaag gaactataac tttacacact agtcacttct ttttaagagg
     5401 caaaagggat tgggaaggtc gtcttggaga taagcactgg tatttcggcc aatggtaaat
     5461 agagtttacc tcaaataggg tagaacctcc ttcatctgtc agttaataac agccactttt
     5521 acaatgccct gtcaaaataa agcggcacgc ccgatttttc actcatcgtc atcaaataac
     5581 ccatcacctt ttggggccat tcgatgccgc gcaccacggt cagattcctc aaaacgggga
     5641 aaaccaaaat atcctccata ccgattccgc cgttgatgcc gtctgaagca ccgtccatca
     5701 aattttccaa ctcttgcaaa tctgcgttta tgcgttcgag atattgggcg gttttattca
     5761 aattggcgga aaagctgccg atgcttttct cttttttgtc tgtaaaatat tttaccgctt
     5821 ccggcgttgc aaattcgggc agcccgattt tgatcacgcg cggctgcacc agtttgtcgt
     5881 tgtatccgcc caccttgtcc agccacgccc gtatctcggg gcggacttcg tctttcagac
     5941 ggtcttcgcg gtcgaaatgc cgcacaatgt ccaaactctc gcccataaac gaaccgtctt
     6001 ctttttgcag gacgggcact tgtttcgcac cgatcatacc gatcggcgtt gcctcgtcgt
     6061 cgtttgccag cacggcttct tcaacgtccg cgccaaacag cccggcagcc atccgcgcac
     6121 gcacacaaaa cgggcaatgg tcgtaaatat acagtttcat caaaatattc ctcgtcaacc
     6181 tgtcggtacc ggctacctta acaccccgcg ccacccgaaa caagtttatc ttcccgccta
     6241 tgcaccgtaa ataaataa
//
LOCUS       DAWKOX010000120         6117 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.120, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000120 DAWKOX010000000
VERSION     DAWKOX010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6117)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6117)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6117
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.120"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(95..2101)
                     /locus_tag="WJK78_001536"
     CDS             complement(95..2101)
                     /locus_tag="WJK78_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ7598450.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVSVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            2390..4417
                     /locus_tag="WJK78_001537"
     CDS             2390..4417
                     /locus_tag="WJK78_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ7598451.1"
                     /translation="MSLSEFIERRTSFNLMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGVLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(4508..6061)
                     /locus_tag="WJK78_001538"
     CDS             complement(4508..6061)
                     /locus_tag="WJK78_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ7598452.1"
                     /translation="MNRTYANFYGMLAAACRKNGNGTAVFDGKEKTAYRALKQEVEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASVGLSKELAGLKAQTPIEKIIWTGKSRPVGETAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQTLLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
BASE COUNT         1266 a         1428 c         1866 g         1557 t
ORIGIN      
        1 tttatgggga tttcccgcat cagggcggta ttcggggcga atcccgcatc agggcggtat
       61 tcggggcgaa tcccgcttca gacggcattg ccggtcaagg cttgtccgaa ggaggatgtc
      121 cctgttcttt ggcgggcggg aggaaaagta tgcagggatt gcttttaatc tgattccaaa
      181 aactcttaat cagattgcgg atgctgccga ttttcgtgcc gcgcgagcgc agggcgacga
      241 agagggcgag gctgaagctg acgcagaggt tgaccaggcc gatggcgagg acgctgaaaa
      301 tgccgagtac gaacgtgccc aaaccgacgt tgccgctgac ggcggcatag ccgaggttgg
      361 cggaggaaaa ggcgacgtgg cggatgtcca gcggcagccc gaggaggtgt ccgaaatagc
      421 cggtcatacc caagagcatc ccgaagatga agttgcctgc caacgagccg tagtgtttgt
      481 ggatgtaggc ggcgaggacg cggcggggcc cggggcgcat gattttacgc agcaaggggt
      541 tgaagggcag gcgttggcgc aggttgaggt agtcggcgcg gttgtcgaaa aaacctgcga
      601 tgatgccgga gcagaacagc cacagacctg caatggcggc ataccacagc gtcgggtaag
      661 cgatgatgtc tatggatttg aactggtagg cggcggtgtg ggcatcgagt atgggctgcc
      721 ggtacagatg ggcatagccg aacgatatgg cgcacgccaa aaggatggcg atggaaacgt
      781 tgccgaaaac ggcgacactt tgggaacggc atacgtcgat gaggagcttg gcgagtttgt
      841 tgtccaccgc tttgccgcct tcgttgagat cgacctgttc ggcaaagctg gcggcagtca
      901 tcgcgggctg tttggtggcg acggtgcagt gcagcatatg gatgatcata aagccgatgc
      961 cgtagttgaa cccagccgac aaggaagtca ggaaggggct gaggccgagt gtgccgatgc
     1021 ggattttgag cagcgccatc agggcgatga tgatgccgcc gcctgccgcc gagtagaaca
     1081 ttttgaaata ttctttgcgg ttgcgggtga tgtagtgttc gccgtggtgg cttttgtttt
     1141 cggtaatgct gcgggcgagc atacggatgc tgctgcggcg caggtggcgg gtgctgtatt
     1201 gttcgaccgc cgcgtagatg agggagttca tcagcgcgat ggtcaggcgg ttgctgttgc
     1261 cggcaccggt ttggatgtcg gtgagcagct ttagacggtc tacggtctgc cggagccgtt
     1321 cgagcaggtg ggcgactttg accgacgaac cggagccggc gcccgtccct ttgcggcgca
     1381 aatagtcaat ctggctgaaa cattggtcga acatcacttc gaggtgggcg gtgtcgtaag
     1441 gcgtggtgcc gttgcggtag tgttcgacca gtttggcggt ttcgcgttgg agggcgacga
     1501 aggaagaatc ggcttccagc aggcgcgggg cgatgcggat gaggtcgggt tcgatggctt
     1561 cggatgccgt ccagacagac agcatttcga tggcgcgcaa acgcgcatcg gcaaggcgga
     1621 tgcccgccgt ctgcaatttg gacggctcgg cgtggctccg gatgagttcg tataaaacca
     1681 gccattggcg gatattgagc gtttgcagcc atttgtcgtc gttttcggaa tggaaaagat
     1741 aaaggaagac ttcgcccaag ttggcaaaat ctttatatga cgggctgaag cgttcgtaga
     1801 tgcgtatgcc catttcccgg gcaaagctgt ggcgcgagaa gatgccgagt ttgatgagtg
     1861 ccggataaat gtgtatttgc gcgagccaga tgtaaaaaca ccggctgaag cgggacagta
     1921 attccctgtc ttgtttgaat gtgtcgataa tcaggtcgaa acgttccccc gcacattttt
     1981 tgccgccacg gcgcaaaaat ttaatcagtg cgttgaggac gctgacaaaa tcggtatgtc
     2041 ccaagctttc cgaaagcagg gggcgcaggt tttgaggggt aattttcttc atatcagcca
     2101 ttgtaccgca tcggcaatcc ggcgttaaac gccccgatag cggggagggc gcgcctgcgg
     2161 aaggcggcgc attttccgcc ggtttgaaat caaactatat taatgatata ataaatatcg
     2221 ataaatcaat ctgatagaat aatccgtatt gatttttaat tttttcgatt ataacaattt
     2281 cggccggttt gtgcatttcg tcatccggaa gccggtattt taccggcagg ttttgaccgc
     2341 tttgcccgat gaccgggttt gtctgttttt aacaaaggag tgagaaggtt tgtccctgtc
     2401 tgaatttata gaacgccgaa cgtcatttaa tctgatggtt attttgacga ctttgttttt
     2461 tgtgtgtgtt ttagtggtat tggttttaac cgtgccggat caggtgcaga tgtggctcga
     2521 tcgggcaaaa gaagtcattt ttaccgagtt cagctggttt tatgttttaa cgttttccat
     2581 ttttctgggt ttcctgctga tactctcggt cagcagtttg ggaaacatca ggctcggacg
     2641 ggatgaagat gtgccggaat tcggcttcct gtcgtggctg gcgatgctgt ttgcggccgg
     2701 gatgggcgtg ggtctgatgt ttttcggcgt ggcagagccg ttgatgcatt atttttcgga
     2761 cattacggcc ggcacgccgg aacacaggca gcagcaggca ttgctgcaca cggtgttcca
     2821 ttggggcgtt cacgcttggt cggtgtacgg tacgattgca ttggctttgg cttatttcgg
     2881 tttccgctac aagctgccgc ttgccctgcg ttcttgtttt taccccctgt tgaaagaaaa
     2941 aatttccgga aggttcggcg atgccattga tattatggcg ttgcttgcta cttttttcgg
     3001 catcatcacc acattggggt tcggggcttc gcaactgggc gccggattgc aggaaatggg
     3061 ctggattgcc gaaaacagct tcagcgtgca ggttttgatt atcgccgccg tcatgtccct
     3121 cgccgtcgtt tcggcaatat ccggcgtggg gaagggcgtg aaggtgttga gcgagttgaa
     3181 cctgagcctt gcgtttttgc tgctgttttt tgttttggcg gcgggtccca ctgtttacct
     3241 gttgtcggca ttcggcgaca acatagggaa ctacctcgga aatctggtgc gcctcagttt
     3301 taaaacttat gcgtacgaac gggaacacaa gccgtggttt gaatcttgga cggtgcttta
     3361 ttgggcgtgg tggtgttctt gggcgccgtt tgtgggtttg tttatcgcgc gcatttcaaa
     3421 ggggcgcacc atccgcgagt ttgtcttcgg ggttttgctc atccccggcc tgttcggcgt
     3481 tttgtggttt accgtcttcg gcaatacggc gatttggctg aatgacgggg ttgcgggggg
     3541 agtgctcgaa aagatgacct cctctccgga aacgttgctt tttaaattct ttaattacct
     3601 ccccctgccc gaattgacga gcatcgtcag cctgctggtc atttctctgt tttttgtaac
     3661 ttctgccgat tccgggattt atgtcctgaa caatattacc tctcgggaca aaggcttgag
     3721 cgcgccacgg tggcaggcgg ttatgtgggg cgtgctgatg tctgccgttg ccgttttgct
     3781 gatgcgctcg ggcggactcg gcaacctgca gtctatgacc ctgattgttt ccctgccgtt
     3841 tgccctgctg atgctgataa tgtgtttcag cctgtggaaa ggattgagtg cggataagaa
     3901 atattttgag acccgggtta accctaccag tgtattttgg acgggcggca agtggaaaga
     3961 acggctggtg cagataatga gccagacgca ggagcaggat attttaaaat tcctcaaaca
     4021 taccgcatcg cccgctatgc acgagttgca acgggagctt tcggaagaat acggcttgag
     4081 cgtccgggtc gataagatgt ttcatcagga cgagcccgca atcgagttcg tcattcggaa
     4141 agagacgatg cgcgatttta tgtacgggat taagtctgtc gggcaggatg tatccgacca
     4201 gttgattaac gacggcaagc tgccgcatat ccggcatcag acaacttaca aaccctacgc
     4261 ttattttttc gacgggcgcg tcgggtacga tgtgcagtat atgaacaagg acgagctgat
     4321 tgccgacatt ttgaaaaact acgaacgtta tttgatgttg ttggatgatg tcggtcagga
     4381 actgatggcg cacgagcagg tggaattggc agagtaagtg ccttatctcc ggcgtttgcc
     4441 aaaaaaaatg cggtgaatca gattcaccgc atttttttgc cggacggggc ttcggacggc
     4501 acggcgttca tttgtttccg tcaaactgct ccttcaacac ccgtttcaat accttgcccg
     4561 tagcgttgcg cggcagcccg tctttaaagt ggatttgttt ggggattttg aaatttgcca
     4621 gcacggtacg caggtggcgg cggatttcgt tctcgcccaa atccatacct tccttcaatt
     4681 ggacgaaggc gacgatttcc tcgtcggcat aacggtcttt cacgccgatg acggcggcgg
     4741 cttcgacggc atcgagtttg tagatttctt cttcaatctc gcgcggatag acattttgac
     4801 ctttggaaat aatcaaatct tttttgcggt cgacgataaa gataaagccg tcttcgtcta
     4861 tggtaacgaa atcgcccgtt ttcaaccagc cgttgacgat ggtttcatcg gtggcggcag
     4921 gcatattgag gtagccccgc atcaccgaac cgcccctgac gatcagttcg cccacttcgc
     4981 cgcgcggcac ttcgaccaat tcttcatcga cggctttggc ttccaaaccg ggcaggggga
     5041 tgccgacgct gcgggctttt tgcctctcgg gcgtattgac ggcgacgacg ggagaggctt
     5101 cgctcagtcc gtagccttcc agcaatttgg cgcgggggaa cttggctttg aaatcgagga
     5161 tggtttgttc cgccaaaggc gcgccgccgc tgataaacag gcgaatgcgg ttgaaccatc
     5221 tgaaatacca agggattttc gccttgctca tcgcggtgta aatcgcgggt atgcccaaaa
     5281 acacggtcgc gcgtttgagc agggtctgtt tcaaaacatt ggaaaacggg aaaacggatt
     5341 tgaccaaaat aatcgaacac gccatataaa tcggcagcag caccatagcc gtcagcgtga
     5401 agctgtggaa catcggcagg aaaacgataa agcggtcgcg tttggaaatt ttaaagatgc
     5461 gttcgatgcc gttcaggttg gcgaacaggt tggcgtaact gattagtgcg cctttgggat
     5521 gccccgtcgt gccggaggtg tagatgatgt gtgccaaatc atttatccgg ggttgtcggc
     5581 ccaagtcggg tttttcgggg aagcggcgca cgtcttcaaa aaaggcatcg ccttccgccg
     5641 tttcgccgac cggccggctt ttgcccgtcc aaatgatttt ttcgatgggc gtttgcgcct
     5701 tcaagcccgc caattctttt gacaggccga ccgaggcgaa caggaagcgc gccttgcagt
     5761 cgttcaggat atacgcgtat tcgctgtttt tcaaaaatgt gttcatcggt acggcgaccg
     5821 cgccgatggc ggagatggcg aaataggcgg taataaattc tgtggaattg gaaaccgcca
     5881 gcgcgaccgt gtcgccgaac ttcacgccga tattttgcag atacgccgcg acggcttcga
     5941 cctcctgctt gagcgcgcgg taggcggttt tttccttgcc gtcgaacact gccgtgccgt
     6001 tgccgttttt gcggcaggcg gcggcgagca ttccgtagaa attggcataa gtccggttca
     6061 tgaaacttcc tttatggttg cggacggcga acgccctcat ttgaaaacaa tatgccg
//
LOCUS       DAWKOX010000121         6023 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.121, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000121 DAWKOX010000000
VERSION     DAWKOX010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.121"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="WJK78_001539"
     CDS             complement(57..1460)
                     /gene="mtrE"
                     /locus_tag="WJK78_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ7598453.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVDTHSAELGGLFKSGTGVWL
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALTAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="WJK78_001540"
     CDS             complement(1515..4718)
                     /gene="mtrD"
                     /locus_tag="WJK78_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ7598454.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSLEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="WJK78_001541"
     CDS             complement(4730..5968)
                     /gene="mtrC"
                     /locus_tag="WJK78_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ7598455.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWASSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1359 a         1700 c         1618 g         1346 t
ORIGIN      
        1 aaagaaatgc cgtctgaaac cttatcgttt cagacggcat tttattgccc gaccggttat
       61 ttgtcggttt gggtatcccg tttcaatccg ccgccgagtg ccttgtacaa atcggcaagg
      121 ttttcggcgc gggtcagttg tgccgacaaa gccgcacctt ccgccgaata gctgctgcgt
      181 tccgcatcga gcaaatcaag cgcgccggat acgccgtgtt tgtaacgcag accgaccaaa
      241 cgcaacgctt ctttagaggc gcggctttgt ttgcttaaag catcataggc tttatccaac
      301 tgctcgcgcg cggtcaatgc gtttgccacg tcttgaaatg cggattggac ggcggattca
      361 taggcaacga tttgtgcctg ttggcgcagt tttgccacat cgaggttcgc cttgttcgta
      421 ccccaggtaa aaatcggcag ggtaatggaa ggtgcgaaca accaaacgcc ggtgccgctt
      481 ttgaacagcc cgcccaattc ggcagaatgc gtatcgacgc ttccggtcag gcggatggat
      541 gggaaaaagg cggcgcgtgc cgcaccgata ttggcgtttg cctgtttgag cgcgtgttcg
      601 gcagcacgga tatcgggacg gtcgagcaat acttcggaac tcaaaccggc cggcagcttc
      661 tcaacaaaaa actgcttgtc caacggcaaa ccggcgggca ggtcgtcggg tatcggttgg
      721 ttaatcaggg ttgccaaggc attgcgcgcc tgttcgcggc tgcgcgcggc atgggcataa
      781 tcggctttgg cagattcgat tagggcttcc tgctgacgta gggcgacggc ggaaatcacg
      841 cctgccttgt aacgtaattc ggacagcttg taggtttcct cgcgcgtttt caaaacacgt
      901 tgcgccaaag acatcgcttc ttcggcataa cgttcgttga aataggcttt ggcaacggtg
      961 gcaatcaggc tcaaatgtgc cgcatcgcgg ttggcggtgc tggcgaaata gccttgcagt
     1021 gccgcctcgc tgctgctgcg tacacgcccg aacagatcga gttcgtaaga tgccgcaccc
     1081 agtccgactt tgtagctgct gcttacattg ccgccgctca agctgccttg gcgcgagtcg
     1141 ttcgcattgg cggcaagcgt gggcaggagg ttgttgcgct caatcatgta ttgtttgcgg
     1201 tagatttcgc tgttcaatac ggcggtacgc aaactggtat tgcgctcgag tgcgatgtcg
     1261 atcagctttt gcaggcgcgg gtcggcaaaa tagtcgtgcc aacccaaatc gacggcgcgg
     1321 atgccgctgt cggcggtatc gtttttgaac gtttcggcaa cttcgacttt gggctgctcg
     1381 tattggggaa tcatggtgca ggcggataat gcgaaggctg ctgcaacaga agtcaaggtg
     1441 gttttcaatg tagtatccat aaaaaagtcc tgatgccgtc tgaaaacccg tgggcgttca
     1501 gacggcatgg ttgcttaatg ttggctgtcg tccgaaccgg tgatgcccgc ttcggcggcg
     1561 tgttttactg ccatttcgtg ttcgtgcgcg gtttctttga agaatttgcg caccaccaca
     1621 tagaaaagcg gaacaaggaa caccgacaag agcgtgccga tgagcatccc ccagaatacg
     1681 gttgtaccaa tggcgcgctg gctggcagaa cttgcaccgc cggcaatata caggggaacc
     1741 acgcccaaaa taaaggcaaa cgaggtcatg ataatcggac ggaaacgcag gcgggctgct
     1801 tccaaagcgg cttcaaccgc gcttttccct tgcgcttgaa ggtctttggc aaactcgata
     1861 atcaaaatcg cgtttttcgc actcaaaccc atcacggtaa cgaaaccgac ttgaaagtag
     1921 atgtcgttgg cgaacgaggg aacgctgccc aacagtcctt caaacaggtt gcgcccggtt
     1981 acgcccgcag ccgcaccgat caaacccaac ggaatcacaa ggatgaccgc cagcggaatc
     2041 gaccagcttt cataaagcgc ggcaagtacc aaaaatacgg ctgcaaccgc caaaccgtac
     2101 aaaatcaggg tttgcgagcc gccttttgcc tcttcgcgcg actgtccgcc ccactccagg
     2161 ctgtaaccgc cgcccaattc gtcaaccatt ttttgaaccg ccgccatagc ctgcccggtg
     2221 gaaacgccgg ttgcaggcga agcggacagc ttcatcgaag gataaccgtt gaagcgtacg
     2281 ctctgttccg taccgttttc ccaagaaaca gtagcaatgg tggaaagcgg tacggcgacg
     2341 ccggatttgt tcggcacggt caggttcaaa atatcggcag gctgcatacg ggcatcctcg
     2401 tcggcctgca ccatcacgcg ttgcagacgg ccttggttcg ggaagtcgct gacataagac
     2461 gaactcagcg cacttgccaa tgcggtgcgg atgtcggcaa acgaaatgcc ttgcgccgcc
     2521 gcggcggcac ggttgatgtc gattttcaac tgcggcgagt cttccaaacc gccggcacgg
     2581 acggtgctgg ggtcaaacaa accgctggca cgcattttct gaatcaactc gttgcgcttc
     2641 gccagcaatg cggtatggcc ggtattgttg cggtcttgca ggttgatgct cagacccgaa
     2701 ccgttgccca actccagaat cggaggcggg acgacggcga tgccaaaacc gtctttaagc
     2761 gtccccatca tcatacccgt cagcttgccg gcaatcgcaa cggcatcgct gccgggcgcg
     2821 gtacgctcgt tccaatcttt caatatggca aaacccatcg ccatattctg accgctgccc
     2881 gaaaagctga agccggaaac ggtaatgatg ttttctattt caggaatgct tttcgccagt
     2941 tgggtaactt gcgccaaagt cgcattggtg cgctcttggg tcgctcctgc aggcagttgc
     3001 acgctgacca tgacgaagcc ttggtcttcg gtcggcagga acgaagtcgg caggcgcata
     3061 aacaggaaca cgcccacaac cgccaagccg atatagacaa ccatcatgcg gaaagtctta
     3121 cgcagcactt tggcaacccg gccttcgtaa ccgtgcgtcc aactgttgaa tttcttgtta
     3181 aaccagccga agaaaccttt tttctcttcg tgatgccctt tcgggattgt cttcaacatt
     3241 gtggcacaca aagcaggggt aagggtcagc gcaaggaagg cggagaatgc gattgatgac
     3301 gccatcgtca gggcaaactg tttgtaaata ttgcccgtcg ccccgctgaa catcgccaac
     3361 ggtacgaaca cggaaatcag aacggcggta ataccgatga ccgcgcccga aatctgaccc
     3421 atcgcttttt tggtcgcttc tttgggcggc aagccttcac ccgccataat gcgctcgacg
     3481 ttttcaacca ccacaatcgc gtcatcgacc acgatgccga tgaccaaaac catcgcaaac
     3541 atggtcagta cgttaatcga catgcccata taagagatga aagcgaaacc gcccaacagc
     3601 gaaatcggta cgacgatggt cggaatcagc gtataacgga tgttttgcag gaagagatac
     3661 attacgacaa acaccagcac catcgcttcg attaaagtat gaatcacttt ttcaatcgaa
     3721 atttcgacga atttggaagt atcgtaaggg gttttccagc tcataccctg aggaaagtat
     3781 ttttccaacg tcgccatgcg ttctttaacc gcctttgccg tcgccatcgc attgccgctg
     3841 ttggacagca tcaccgccat accggtggta tttacaccgt tcagacgggt tgaggaagaa
     3901 tagtcttcca tacccagtcc gacccttgcc acatccttca ggtaaacatt agaaccgtcg
     3961 gtattggcgc ggaggatgac gttgccgaat tcttctgccg tacccaactg cccttgcgcc
     4021 gttacggtag ccgtaaccgt ctgtccgcga acggcgggaa gcgaaccgat agaacccgct
     4081 gaaatctgga cgttctgggc ggacagcgca ctgccgatat cggcaaacga caaattgtag
     4141 ttttgcagtt tcttaggatc aacccaaatc cgcatcgcgc gttgcgcgcc gaacaggcgt
     4201 acctgcccca cgccttcgat acgctgcagt tcgggaacga tattacgctg cgcgtagtcg
     4261 ttcatctctt cggttgactg cacatccgac gaaagcatca caatcatcag gaaattggaa
     4321 cgcgccttgg atacggttac gccgtattgc tggacggttg ccggcagcgt gctcaatact
     4381 tcggaaagct tgttctgcac ttccacctgc gccagattct cgtcggtatc gggcgtaaag
     4441 gtcaggctca cgctgccgct gccgctcgaa tcggcggaag tggacatata atccaaacct
     4501 tccacgccgt tcatattccg ctcgatcacg gaaagcacgc tgtcttccat tacctgcgcg
     4561 gacgcacccg gataagtggc gtgcaaagta atggtcgggg cggcgacaga cggatattgc
     4621 gaaacaggca ggcttttgat gccgaaaata cccgccgcaa taatgaaaat cgaaataacc
     4681 cacgcaaaaa tagggcggtc gataaaaaat ttagccatcg atgccttcct tattccgctt
     4741 cagaagcagt tttggcttca gatgccgtct gaacgccgga ttgaggcgcg gcggcttggt
     4801 tttcagacga cgcccattct ttgggcgtta cctttttcgc acccgttata ccggcgatac
     4861 tgatgccttc cacaaccacc ttgtccccgt ccttcagacc cgacgtaaca atccaattcg
     4921 taccctgctg ttgcgcaacc gttacctcgc ggggttccat accgccttgg gcattcacaa
     4981 tcatcacggt atctttcgca ccgcgcgtta ccgcctgctg cggcacaaca aatgcgttat
     5041 ccaccgccac ttggtccatc agcacgcgca catacaggcc gggcatcagg atattctgat
     5101 cgttcggtac ggcggcgcgc agggtaatct gaccggtcga ttcgttgacg gtcggatcgg
     5161 caaacagcag gcggcctttt tcagggtaaa ctgtaccgtc gtcaaatttg atgccgaccg
     5221 caatcacacc atccgccgcc agcagtttgc cttcggctat ctgacggcgc aatttcatca
     5281 cttcggatgc agactgggta acgttcacat acatcggatt ggtttggcgg atggttgcca
     5341 gcacggtcgt atcgcccgca ttcaacagcg taccttcgga aactttggac tgaccgataa
     5401 agccggaaat cggcgcggta atgcgcgaac ggttcagatt aatgccggca gatttgattg
     5461 ccgcctgtgc tgctttgaca cctgcctcgg cagaacgttt cgccgttacc gcagcatcgt
     5521 attcctgccg gctgacggct tcggcggcaa ccaaaggctt gtatcgcgcc aaatccgcat
     5581 ccgctttggc aagcgttgcc tgagccgttg ccagttgcgc gcgcgcactt tccagacctg
     5641 cttcataagt ggaactgtcg atctgataca gcggctgtcc ggcacggaca taactgcctt
     5701 cttggaacag gcgtttttgg atgatgccgc cgacttgggc gcggacatcg gcggtacgca
     5761 gcgattccaa acgccccggc aactcgacgg tcaatgcgac ggtttgcgga tggacggtta
     5821 cgacaccgac gacgggcgca ggggcttccc gaccagcagg ctgcccgccc tgcgccgcgt
     5881 ctccgccttt accgcaagac gacagtacca atgcaacggc ggcagccaac gcggccgcac
     5941 gcatcgcctt aaaagcataa aaagccatta tttatcctat ctgtctggtt tgatgtaaag
     6001 ggttttgcca atcaacaggc att
//
LOCUS       DAWKOX010000122         6023 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.122, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000122 DAWKOX010000000
VERSION     DAWKOX010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.122"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..361)
                     /locus_tag="WJK78_001542"
     CDS             complement(53..361)
                     /locus_tag="WJK78_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598456.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHNHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLADLDKELC
                     "
     gene            complement(345..647)
                     /locus_tag="WJK78_001543"
     CDS             complement(345..647)
                     /locus_tag="WJK78_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ7598457.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(721..3084)
                     /locus_tag="WJK78_001544"
     CDS             complement(721..3084)
                     /locus_tag="WJK78_001544"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ7598458.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVIAEVKSVEKHPDADRLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQIDAPADCGRFI
                     SRVIENVNARATTPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAARGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGNVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3120..3638)
                     /locus_tag="WJK78_001545"
     CDS             complement(3120..3638)
                     /locus_tag="WJK78_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598459.1"
                     /translation="MSEIINLTESGITFNLVKNNLFYIEPYIRKRRQEGIKTVEFIYL
                     QEDNLLFVEAKQSIPNQERSPERFDEYISEIYQKWCNALNVEILGILGREDIKETIMP
                     SAFSNLQWGSIEIKLLLVIPDVPLNYLGQLNELIKQEFNKKDTLRLISLWNISVEVIN
                     RDLAIQKGLASS"
     gene            complement(3645..4709)
                     /locus_tag="WJK78_001546"
     CDS             complement(3645..4709)
                     /locus_tag="WJK78_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ7598460.1"
                     /translation="MIKSFELENFGPISLLKADNLGKINLIIAENSKGKTFILKALYS
                     VLKSHEEAHKGKNIRDFSEELRDKLYWTFQVEEIGDLVTRGKENPNERPLKLSMTLED
                     SSSVLFSFGRTTKKLIKPELYELSPRINANSIFLPPKEVLSLFDVIKKSEEEKRFGFD
                     ATYIDLVKALDIKPTKGRNYPEAAEARKDLEALFGGYVSYNDKKKAWVYEKDRQTFSI
                     NSTAEGVKKIGILDTLLGNRFLSPGSILFIDEPEANLHPKAINQFLEILFSLSKSKLG
                     IQIFMSTHSYFVIKKLCLLARKHSESIPVFMPGKEKEQTTWVQENLQNSMPDNEIIGE
                     SIRLFREEIGVLSPETAWIG"
     gene            complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WJK78_001547"
     CDS             complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WJK78_001547"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ7598461.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
BASE COUNT         1517 a         1553 c         1276 g         1677 t
ORIGIN      
        1 attttttagc gtgtaaaaca aaaccggctg catacctgca accggcctca aatcagcaca
       61 attccttatc caaatccgcc aacaggtctt tcagaccgtc tccgatttcc tgaagcgtaa
      121 ccggacggtt gccgtccgaa cccgattccg caccttctgc atacggtgca aacgtgctct
      181 gcaatttcaa cagtttcacc acatccaaac gggtgtagcg ttcgccgccg taaccgacaa
      241 ccacaccgtg attatgctgc cattgcgcaa aaccataggg gctgatttgc aacagtccgc
      301 acaactcgtc cagcgtgaaa tagcgttttg cgggaacctt caaatcaacg ttgtttgtca
      361 tagtagtgtt ccaccatgct tttgagtttc tggctggcat ggaaagttac cacgcggcgg
      421 gcggtaatcg gcacttcctc gccggtttta ggattacgac ccgggcgttg cggcttgtcg
      481 cgcaactgga aatttccgaa accggaaatt ttgatttctt cgccgcttgc caaagtgctg
      541 cggatttctt caaaaaagag ttcgacgatt tctttggcat cgtttttggt gacgttgctg
      601 actttgtcta ccaaaatatc ggccagttct gctttagtga gagtcatatg attaccttct
      661 gttgtaacag ttgtggatta ttaccaattt ttatttaaaa ttcaagcgaa tatttatttt
      721 ttaactgcga agccgcgccc ctgccgccgt tgccgcgcca atcagttttc cgataagcgg
      781 ctcgaccgcc tcatccgtca gcgtgttttc catatcctgc aaaatcactt tgaccgccac
      841 gctcttcatc ccttcgggca gtcccgtgcc gcgatacacg tcaaacacgc tgatttcctg
      901 taccaacttg tttgccgcgc ctttcaagac aagcagcaaa tcatcatggc tcatagcttc
      961 cggcatcaca aacgccaaat cgcggcgcac cggctggaat ttcgatacgg cccgatagcg
     1021 cgttttcccg cattccaaca cggccgccat atcgatttca aataccagcg gcgcttgcgg
     1081 caggtcgtat ttttgcagcc atttcggatg cagttcgccg acaaagccga tgacgttgcc
     1141 gtctgaaacg atattggcgg cgcgtccggg atgcagggca ggatgtccgg ttttaacgaa
     1201 ctcgaccgct ttgtttttca acagattttc cacatctgcc ttaatgtcgt aaaaatccgc
     1261 attgcgcgtt ttcccgcccc attgttcggg cattgccgcg ccgtaccaca agccgccgat
     1321 gcgttcgttt tggacaaacc ggccgtctga acctttgccg aacacgcggg cgatttcaaa
     1381 cacgcgcacg cggttttgtt tgcggttcag gttgttttgc aaaatttcca ccaagccgcc
     1441 gatgagtgtg gaacgcatca cggcatattg cgccgccagc gggttttgca ggcggatggg
     1501 gtcggcgttg gcggcaaaat cttgttccca ctgctcgtca acgaaggcat agctgaccac
     1561 ttcgcggtag ccgcgcgccg ccatttcgtt gtaaacggca aaacgcgggc ggcgtgtttc
     1621 gggcagttcc agcattttca gacggcctga cgtgtaatcg tcggggatgt tttcatagcc
     1681 gtaaacgcgt ccgatttctt caatcaaatc agcctcaatt tcgatgtcaa aacggaagct
     1741 cggcgcggta acgcggaagc cttccgccgt tttctcgggc tgcaggccca agtgttgcaa
     1801 aatggtttcc acctgttcgg caggaatgtc cacgcccaac acggttttca gacggcccaa
     1861 acgcaatccg acctgcttcg cttcgggcaa ttcgccttgc gcttccacca tttcgcctgc
     1921 cgcaccgccg caaatctgca acaccaattc ggtagcacgc tcaatggcat ccgcctgcaa
     1981 acggtaatcc acgccgcgct cgaagcggaa cgacgaatcc gaaccgaaac cgtattggcg
     2041 cgatttgccg gcgatgattt cgggcgcaaa ccaagccgct tccagcacga tattttgcgt
     2101 gccgtctgaa accgcgctcg ccgcgccgcc cattaagccc gccaaactca acacgccttt
     2161 ttcgtccgcc acgaccagcg tgttttcaga cagggaaacg gttttctcgt tcaggcattc
     2221 cagcgtttcc ccttcgcgcg cgcggcggat gtgcaggctg ccggaaagtt tgtcggcatc
     2281 aaaaacgtgc atcggctgac cgatttccag catcacataa ttgccgatgt ccaccagcgc
     2341 ggaaatactg cggatgccgc tgcgctccaa acgttgtttc atccaatccg gcgtagtagc
     2401 gcgcgcgttc acgttttcaa tcacacggct gataaagcga ccgcaatcgg caggcgcgtc
     2461 aatctgcacg ggctgttttc gactgcccgt gatcggcgcg gtatggattt cgggctgcct
     2521 gaacgcgcac cccgtcaatg cggacacttc gcgcgcaatg cctttgatgc tcaagcagtc
     2581 ggcgcggtta ggcgtaattt tcaacgtaaa cagcgtatcg tccaaatcca agtattcgcg
     2641 gatattggta ccgacgggcg catcttcagg cagaatgtgc aggccgttca caccgtcgtc
     2701 gggcagaccg agttcgtcgg tggaacacaa catcccgtcc gacaccacgc cgcgcatttt
     2761 ggtcggcttg attttgaaat tgcccggcaa cactgcgccc ggcaacgaac acggcacttt
     2821 gatgcccgct ttcacattcg gcgcaccgca cacaatctgc accaacccgc ccgtacccgc
     2881 atcaactcgg gtaacgttca aacggtctgc atccggatgt ttttcaacgg atttcacttc
     2941 ggcaatcacc acgcccgcaa acgcaggcgc ggcagtttcg gcctcttcca cttccaagcc
     3001 ggacatcgtt aacagatgtt ccagcttatc ggaggaaagt tcggtatcgg cttgggtttt
     3061 cagccatgaa taggagaatt gcatgttatg ttctcaatca attaattaac tttagatttt
     3121 caagagctag ctaaaccttt ttgaatggct aagtccctat taattacttc tacagaaatg
     3181 ttccataaag aaatcaaccg caaagtatct ttcttattaa attcttgctt tattaattca
     3241 ttcaattgcc caagataatt aagcggcaca tccgggataa ccagtaataa tttgatttct
     3301 atgctacccc attgcaaatt tgaaaaagca ctaggcataa ttgtttcttt gatatcttct
     3361 ctgcctaata ttcccaaaat ttcaacattt aatgcattac accatttttg ataaatctct
     3421 gaaatatatt catcaaaacg ctcaggagat ctttcttgat ttggaatact ttgttttgcc
     3481 tcaacaaata acaaattatc ttcttgcaga tagataaact ctactgtctt aataccttct
     3541 tgccttctct tccggatata tggttctata taaaacaggt tattttttac tagattaaaa
     3601 gttatacctg attcagtgag atttattatt tcactcataa aaacctaacc aatccatgct
     3661 gtttccggag ataaaacacc tatttcttct ctgaacaatc gaatagactc accaataatt
     3721 tcattatccg gcatgctatt ttgtaaattt tcctgcaccc aagtagtctg ttccttttct
     3781 ttgccaggca taaaaacagg aatactttca ctatgctttc tagctaataa acacagcttc
     3841 ttgataacaa aatatgaatg cgtactcata aaaatctgta ttcccaattt ggatttagat
     3901 aaggaaaaca gaatttctag aaattgatta attgctttcg gatgtagatt agcttctggc
     3961 tcatcaataa ataagattga tccaggactc aaaaaccgat ttcctaatag agtgtctaat
     4021 atcccaatct tttttacccc ctctgctgta gaattgatag agaaagtttg tctatctttt
     4081 tcatataccc atgccttctt tttatcattg tagctaacat aaccgccaaa caatgcttct
     4141 agatcctttc tagcttccgc tgcctcaggg taattcctcc cttttgttgg tttaatatcc
     4201 aatgctttta ccaaatcaat gtaagtagca tcaaaaccaa atctcttttc ttcctctgat
     4261 tttttaatta catcaaatag tgatagaact tctttgggtg gtaaaaaaat agagttagcg
     4321 tttattctgg gagaaagttc gtatagctcc ggtttaatta gctttttggt agttctacca
     4381 aaagaaaaca aaactgaaga actatcttct aaagtcatac ttaacttaag aggccgttcg
     4441 tttggatttt cttttcctct tgtaactaaa tcaccaattt cctctacttg gaacgtccaa
     4501 tatagcttat ctcgcaattc ctcagaaaaa tcacgaatat tctttccttt atgagcttcc
     4561 tcatgacttt ttaaaacact atataatgcc tttaaaataa aagttttccc tttgctattt
     4621 tctgcaataa ttaaatttat tttccctaaa ttatcagcct tcaataagct aatcggcccg
     4681 aaattttcaa gctcaaatga tttaatcata taatccccct aatatatatc aacaatattt
     4741 gtacaagcca cattgtaaaa agacagcaac cacagcacca tagtaaacgc atagcaggcg
     4801 gataatggag cgacatagcg tttcatgatt tagctttctg aggtaggcac aggctgcttt
     4861 tttcattttt aggcagccta cacaatcatt ttacaaactg cttcaaaaaa ttcaaatcgt
     4921 tatcaaaaaa caagcgcaaa tcgttcacgt tgtaacgcag catcgcgaaa cggtcgagac
     4981 cgataccgaa agcgaaaccg gtgtattttt cagaatcgat attcacattt ttcaacacgt
     5041 tgggatgcac catgccgcag ccgccgactt ccagccattt gccgttttct cccataatgt
     5101 cgatttcggc agacggttcg gtgaacggga agaaagacgg gcggaaacgt acttgcaaat
     5161 catcgcgttc aaagaagcga cggataaaat ccgtgaacac tgcttttaag tcggcaaaag
     5221 ttacgccctc ttctacccac aaaccttccg cctgatggaa cataggcgag tgcgtggcat
     5281 cgctgtccac acggtaaacg cggccggggg cgataatgcg gatgggcggc tcttttttat
     5341 cgagcatata gcggatttga atcggggaag tgtgcgtacg caaaacatca ccgttttcaa
     5401 cgtaaaacgt atcctgcatc gcacgggcag gatggtttgc agggatgttc agggcttgga
     5461 aattgtgaaa atcgtcttcg atttcaggcc cgtccgccac ttcgaaaccc attccgtgaa
     5521 agagttcgac cacacgttgc aaggtcaggg ttacgggatg caggctgccg ccttcctgag
     5581 cgcgtccggg cagggtaatg tcgagggctt cggcggcaag tcgggcttgc agcttggctt
     5641 cgttgagggc atcgcgtttg gcattaaaag ccgtctgaaa ccggtttttg cattcattga
     5701 tatgcgcacc tatggttttg cgctcttcag gcgacatttg ccccaaagtt ttcagaagtc
     5761 cggtcaactc gccggttttg ccaagataac gggctttgat ttgttctaga gcgttgaagt
     5821 cttgcgcagc ttctactgcg gcaatgcctt ctgcaacgat gcggtttaca ttttccataa
     5881 tatcaagtct gtcaattaat gatatgccac ctgaaacaac gaggccgcct gtatagcctg
     5941 acatatcaga ctcttcagac gaccttattt tcttcacggt caatccattg gataaatttt
     6001 ctgtatagtg gattaaattt aaa
//
LOCUS       DAWKOX010000123         5968 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.123, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000123 DAWKOX010000000
VERSION     DAWKOX010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5968
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.123"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(48..1559)
                     /gene="ubiB"
                     /locus_tag="WJK78_001548"
     CDS             complement(48..1559)
                     /gene="ubiB"
                     /locus_tag="WJK78_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ7598462.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
     gene            complement(1594..2058)
                     /locus_tag="WJK78_001549"
     CDS             complement(1594..2058)
                     /locus_tag="WJK78_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEZ7598463.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLKENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITRRYMELETVVPPEEGEGEGEG
                     ADGEMPEYLELHGGREDDISAPSQPEPPSRNIKLLVFGLLIAFLGYLLGKIF"
     gene            complement(2055..2201)
                     /locus_tag="WJK78_001550"
     CDS             complement(2055..2201)
                     /locus_tag="WJK78_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598464.1"
                     /translation="MPSERSDGIFTFRKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            complement(2218..2556)
                     /gene="erpA"
                     /locus_tag="WJK78_001551"
     CDS             complement(2218..2556)
                     /gene="erpA"
                     /locus_tag="WJK78_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ7598465.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(2688..3374)
                     /locus_tag="WJK78_001552"
     CDS             complement(2688..3374)
                     /locus_tag="WJK78_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7598466.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3562..3834
                     /locus_tag="WJK78_001553"
     CDS             3562..3834
                     /locus_tag="WJK78_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598467.1"
                     /translation="MKKTGKYLIYTAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            4042..>5968
                     /gene="dnaK"
                     /locus_tag="WJK78_001554"
     CDS             4042..>5968
                     /gene="dnaK"
                     /locus_tag="WJK78_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ7598468.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
BASE COUNT         1704 a         1602 c         1326 g         1336 t
ORIGIN      
        1 cgatttcctt ataaacgggc ggagtcgggc gatgattcgg acaaagccta tttcaaaagc
       61 aaaatcagca gcaaaacaac cgcaatcaca gccagccaca ggctttgccg ctgctgcact
      121 ttgaccaaat ggatataggc atcacgcatt tcctgctggc ggttttcatc aatcaacgca
      181 ctgattttgc gcggcaatga agggatgatt tgcgcccagt cgggggcttc gtttttgagg
      241 ttgcgccaaa gggctttagg gccgacctgc ccgttcatcc atttcaccaa aaacggtttg
      301 gcggttttcc acaagtccaa atcgggatcg agctggcggc ccaagccttc gatgttgagc
      361 agcgtttttt gcagcagcac aagctgcggt tggatttcga cattgaagcg gcggctgact
      421 tcaaacaggc gcatcagcac caagccgaag gaaatctgcg aaatcggttt gttgaacacc
      481 ggttcgcaca cggcgcggac ggcggcttcc aattcttccg cacgcgtgtc ggcaggcacc
      541 cagcccgatt cgatgtgggc ggtggcgacg cgccggtaat cgcggttgaa aaaggcgagg
      601 aaattgatgg cgagataacg tttgtcgtaa tcggtcagcg tgccgacgat gccgaaatcg
      661 agggcgatgt agcggttgtc ggcggcaacc aaaatattgc cggggtgcat atccgcgtgg
      721 aaaaagccgt cgcggaagac ctgcgtgaaa aagatttcca cgccgtaatc ggcgagtttg
      781 tgcaaatcga tgccgtctgc tttgagtttg gcgatgtcgg caaccggcgt gccgtccatc
      841 cattcgattg tcagcacgtc gctggtgcag tagtcgtaaa acaccttggg cacaatcagc
      901 atattgctgt tttggaaatt gcgcccgagc tgtccggcat tggcggcttc gcgcatcaaa
      961 tccaactcgt cgtgcaggta tttgtcgaac tccgccacca cttcgagcgg cttcagacgc
     1021 ctgccgtctg aaaacaagcg ttcgacccag gccgcgccga aacgcatcag cgacaaatcc
     1081 tgttcgataa ggggcaaaag gttggggcgc aaaactttaa ccgccactcg ttcgcccgaa
     1141 tgcaggcggg ctttgtgtac ttgggcgatg gacgcgctgg cgatgggctc ggtttcaaat
     1201 tccgcataca gcttttcgat ggactgaccc aacgattttt cgatttgttc acgcgaaagc
     1261 cgcgcgtcaa aaggcggcac tttgtcttgc agctttgcca gttcgacggc gtaatcgtgc
     1321 ggaatcaaat cggggcgtgt ggacaaaacc tgcccgaact tgatgaaaat cggccccagg
     1381 ctttccaagg caaggcgcag acggacagca ggcggttcgt ttttcaattt ggacgactgc
     1441 ggcatcattt tcagcagagc gcatatccaa ccgctaccca tcagcgaagc acacagacct
     1501 gccagccgat agcggtaaaa agtcccgaca ataaccgtca ggcgtttcaa ccatttcata
     1561 tataaaatcc cgaatacagc atttatcgga caatcaaaaa atcttaccga gcagatagcc
     1621 caaaaaggca atcagcagcc cgaaaaccag cagtttgata ttgcgggacg gcggttcggg
     1681 ttgcgaaggt gcggaaatat catcttcccg cccgccgtga agttcaagat attcgggcat
     1741 ttccccatcc gcgccttctc cttcgccctc cccttcctcc ggcggcacga ccgtttccaa
     1801 ctccatatat ctccgggtaa taatatccaa acccaaatag ctgaaataat catgcaactc
     1861 ttcccgtttc gcccaagtgc atttttcctc aaccagcact tgaggtttgg aatcgagcga
     1921 ttcgatcaat ccttccgcct tttcctcgcc gagattctcc ttaaggcact cccggataag
     1981 cccgcgatcc acttggggcg ggtaagaaac atatacatcg tacaaatcgt ttcggtaatc
     2041 tttactcatc tcaatcataa gggaacaaat acgcctgata ccgttccgcc cgttcctttc
     2101 gggaaacccg attcatcttc aaacaatcgg attatatgtg aattcatccc gataatatat
     2161 tttctaaaag taaaaatgcc gtctgaacgt tcagacggca tcacacaaac caagcggtca
     2221 tacggaaaac gacgatccgc aaccgcaggt tgtttccgca ttcggattgc ggatgacgaa
     2281 ttgcgaaccc tgcaaacttt ccgtatagtc gatttccgca ccgaccagat attgatagct
     2341 catcggatcg accaaaaaga ccaaaccgtt tttctcaatt tcaaaatcgt cgtcgttttt
     2401 gatttcgtca aaagtaaatc cgtactggaa acccgaacag ccgccgccat tgacaaaaac
     2461 ccgcaatttc aaatcgggat tgttttcttc ggcaatcaaa tcggcaactt tggcacagca
     2521 gctgtcagta aaaataatag ggctttcatc cgacatggtg ttattcctta atataatatt
     2581 ttctgcattc tctctcaaac ccccttcaaa ggcaagcagg cttcgccttt gaaaaaggaa
     2641 ttgttccaat agataagttt gaccgcctgc aatttcaagc cccaaactca aatcgtcctg
     2701 ccgaaccact cgacacgccc gataatctcc acatcatcgg tcaaatcgtt caaattgatt
     2761 tcaaaagcag gataagcctc gtttgcagaa atcacattga taatcccgcc cggtacaatc
     2821 tgtaaacgtt taaccagcag attttcatta atccgcaaca catacagacc gtccctcggc
     2881 gtattttcac catgattgac caaaatcgaa tcgccgtcat tcaaaacccc ctccatcgaa
     2941 tcccccttga cggaaattac agacaggttt ttcgtatcgc gggtaacata attctcaatc
     3001 caatgccgtc tgaacgccat tgtaaatacc ggttcctcat gatcgacaaa ctgcccgtat
     3061 cccgcagccg cccgaatatc atatctcggc acgaagacaa actcgtccgt atcgacttca
     3121 ttgcccaaag tatcgtaagc aagggatttt tttggggctt catccggaaa cggattaccc
     3181 tccccggtca gcagccaatc gatactacac cccttcaact gcttgatttt tttcaatgtt
     3241 tcagactttg gcagaccgcc ttcattccat atcctgctga agcccgcaat cgtcatttca
     3301 atatcggatg cgatttttgc ctgcctcgct tcgcttttcc ataaaaaaac cagtctgtct
     3361 ttaaaggttt ccataaatat ccttccactc cccttcattc aatcatctaa agtaaacatg
     3421 aaatatattt taccttagct atccaaaaaa cggaacaatt atgataaact aaatttaaat
     3481 tatgattttt cttacttaat acataatttt tcagattttt ccataggttt aatcctgaat
     3541 tgacagaaaa aggatagaaa aatgaagaaa accggcaaat atcttatcta tactgcggca
     3601 tttaccgcat tctgctttgc cttccaagaa aaccgttctg aagccaaaca gcccgacatc
     3661 actttatccg catccctgtg cgaacaattc aacatactga acgccaaaga tatggatgca
     3721 gaacaagtct ccctttccaa agaatgcgac atcatcgagt cttcacacga ctgggaaaaa
     3781 gagtacggca acttgaacga acaggaaatg ctcgccggca tcgtctacga ataaacctgc
     3841 ctgccatttg aaatattatg cttgaatgca ttggagccaa atgtattaaa tcaaatataa
     3901 aaccaatata ttcataaagt tatatactta tagccatgct gtagcttgaa acagcccgcc
     3961 gcccgcccta tttacagccc atcgggacaa aatgttccaa catatttctc aaaataagca
     4021 aaatcaaata ggattatcca catggcaaaa gtaatcggta tcgacttagg tacaaccaac
     4081 tcttgtttgg ccatttccga aaacggtcaa accaaagtta tcgaaaacgc agaaggcgca
     4141 cgcaccacgc cgtccgttat cgcttatttg gacggcggcg aaatcctcgt cggcgcgcct
     4201 gccaaacgcc aagcggtaac caacgccaaa aacactattt acgccgccaa acgtttgatc
     4261 ggccacaaat ttgaagacaa agaagtccaa cgcgacatcg aatctatgcc tttcgaaatc
     4321 atcaaagcca acaacggcga cgcatgggta aaagcacaag gcaaagagct gtctcctcct
     4381 caaatttccg cagaagtcct gcgtaaaatg aaagaagccg ccgaagctta cttgggcgaa
     4441 aaagtaaccg aagccgtgat taccgttccg gcctacttca acgacagcca acgtcaagcc
     4501 accaaagacg caggccgtat cgccggtttg gacgtaaaac gcatcatcaa cgagccgacc
     4561 gcagccgctt tggcattcgg tatggacaaa ggcgacaaca aagaccgcaa agtagccgta
     4621 tatgacttgg gcggcggtac tttcgatatt tccatcatcg aaatcgccaa cctcgacggc
     4681 gacaaacaat ttgaagtatt ggctaccaac ggcgatactt tcttgggcgg tgaagacttc
     4741 gaccaacgct tgatcgacta catcattgac gagtttaaaa aagaacaagg cattgatttg
     4801 aaacaagacg tcatggctct gcaacgtctg aaagaagctg ccgaaaaagc caaaatcgaa
     4861 ttgtccagcg gccagcaaac cgaaatcaac ctgccgtaca tcaccatgga cgcaaccggc
     4921 ccgaaacact tggcgatgaa aattacccgc gccaaattcg aaagcctggt tgaagacctg
     4981 attgcccgct ctatcgagcc ttgccgcacc gcattgaaag atgccggtct gagcactggc
     5041 gacatcgacg acgtgatttt ggtcggtggt caaagccgta tgccgaaagt acaagaagcc
     5101 gttaaagact tcttcggcaa agagccgcgc aaagacgtga accctgacga agctgtcgcc
     5161 gtaggcgcag cgattcaagg cgaagtgtta agcggcggcc gcagcgacgt attgctgctg
     5221 gacgtaaccc ctctgtcctt gggtatcgaa accatgggcg gcgtgatgac caagctgatt
     5281 caaaagaaca ccaccatccc gaccaaagcg tcgcaagtgt tctctaccgc cgaagacaac
     5341 caaagcgcag taaccatcca cgtactgcaa ggcgaacgcg aacgcgcttc tgccaacaaa
     5401 tctttgggtc agttcaactt gggcgacatc gcacccgcac cgcgcggtat gccgcaaatc
     5461 gaagtcacct tcgatattga cgccaacggt atcctgcacg tttccgccaa agacaaaggc
     5521 actggcaaag cagccaacat caccatccaa ggttcttcag gtttgagcga agaagaaatc
     5581 gaacgcatgg tgaaagatgc cgaagccaat gccgaggaag ataaaaaact gactgaattg
     5641 gtcgcttccc gcaaccaagc cgaagccctg attcactctg tgaaaaaatc tttggccgac
     5701 tacggcgaca aactcgacgc agccgagaaa gaaaaaatcg aagccgcgct gaaagaagcc
     5761 gaagaagcag ttaaaggcga cgacaaagcc gctatcgatg ccaaaaccga ggcgctgggc
     5821 gcagccagcc aaaaactggg ggaaatggtt tacgctcaag cacaagctga agcccaagca
     5881 ggcgaaagcg aacaagccaa tgcttctgca aagaaagacg atgatgtcgt agatgccgac
     5941 tttgaagaag taaaagacga caaaaaat
//
LOCUS       DAWKOX010000124         5962 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.124, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000124 DAWKOX010000000
VERSION     DAWKOX010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5962
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.124"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..570
                     /locus_tag="WJK78_001555"
     CDS             <1..570
                     /locus_tag="WJK78_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ7598469.1"
                     /translation="LKNEIPSEPVVFMKPSGSILNSGGTILLPEFSRDVQFECELVLL
                     VGKDSDGTGEGKDILGCVAGYGVGLDLTARDIQCRLKEKGLPWLKAKGFRHSACVSDF
                     AAAGRIGNPENVLFSLKQNGVLKQRGDTGLMIYPIREILHKLAADYGLGKGDLVFTGT
                     PSGVGAIGAGDNLALELDGLVRASFTVGC"
     gene            complement(580..1035)
                     /gene="ruvX"
                     /locus_tag="WJK78_001556"
     CDS             complement(580..1035)
                     /gene="ruvX"
                     /locus_tag="WJK78_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ7598470.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(1028..1576)
                     /locus_tag="WJK78_001557"
     CDS             complement(1028..1576)
                     /locus_tag="WJK78_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ7598471.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(1578..2138)
                     /locus_tag="WJK78_001558"
     CDS             complement(1578..2138)
                     /locus_tag="WJK78_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ7598472.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            2466..4256
                     /locus_tag="WJK78_001559"
     CDS             2466..4256
                     /locus_tag="WJK78_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ7598473.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSARKGREGD
                     KKSKAEHKKAHGKSVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKAQI
                     SRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKALAV
                     QEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLEQKGNE
                     QQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEMSNL
                     TAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYSTA
                     PATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAAGSKIG
                     SSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            4383..5867
                     /locus_tag="WJK78_001560"
     CDS             4383..5867
                     /locus_tag="WJK78_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ7598474.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLINSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         1592 a         1400 c         1722 g         1248 t
ORIGIN      
        1 ttaaaaaacg aaataccttc cgaacctgtg gtgtttatga agccgtcagg cagcattttg
       61 aacagcggcg gtacaatctt gctgcccgag tttagtaggg atgtgcagtt tgagtgcgaa
      121 ctcgtgctgc tggtcggtaa ggattcagac ggcacgggcg agggtaaaga tattttggga
      181 tgtgtcgcag gatatggtgt agggctggac cttacggcac gggatatcca atgccgtctg
      241 aaggaaaaag ggctgccctg gctgaaggca aaagggttca ggcattccgc gtgcgtgtcg
      301 gattttgcgg cggcaggcag aatcggcaat cccgagaatg tgttgttttc attaaaacaa
      361 aacggcgtat tgaaacagcg cggggatacc ggtttgatga tttacccgat tcgggaaatt
      421 ttacacaaac tggcggcaga ttacggtttg gggaaagggg atttggtgtt taccggaacg
      481 ccctccggcg tgggcgcaat cggtgcgggg gacaatttgg cattggagct ggacggcttg
      541 gtgcgcgcct ctttcacggt agggtgttaa ccgcgccgct taaccctcac gcccgttgaa
      601 acattccgcc ggaccgccct cgaaaaaacc gtgcaagatg gcttgcgccg ccacttggtc
      661 gagcaccgat ttgcgttttt tgccgaagac ctgtgcttcc gaaagcaggc tttcggcata
      721 gacggacgac agccgttcgt caacccaata gacggggaga ttgaacctgc cgttcagcct
      781 gcgtccgaac ttgcgcgaca ggtgcgtcat ttcatgtttc gtgccgtcgg tatgcacggg
      841 cagtccgacg acaaaataac gcggctgcca ttcttgaacc agcttggcga ttgccgcgaa
      901 cttttcatcg ttgctgccgc cggtaacggt gctcaaagga tgggatagcc ctaattccgc
      961 gtctccttgt gccacgccga tacgcgcttc gccgaagtcg aatgccagtg ccgttccttt
     1021 tggaatttta tgcatggccg gctcccgaaa acagggcgag cgggtcgatg ccgagtttgg
     1081 cgaatgcggc ggcgtaacgg tgttcgtagg ggatgtcgaa caggatgtgt tcgtcggcgg
     1141 gaacagtcag ccacgcattg tcggcaagtt cgcgttcgag ctggcctttt ccccagcttg
     1201 aatagcctat gctgatcaag gctttgtcaa ccgcaccttc gcgtgaaata ttttcaatca
     1261 cgtctcggga agaagttagc gcgatattgt ctgaaacgcc gatactgctt tgccagttgc
     1321 cgatcggggt atgcacgaca taacctcgct cgacttgcac cggcccgccc atcatcacgc
     1381 tgtcgtgctg catccgcatg gggatgtttt tgccggtggc ggaaaaaatc atgtccatcg
     1441 taatcggaga gggtttgttg atggcgatgc cgagtgcgcc gtcttcatcg tgtttgcaga
     1501 tatagacgac cgattgtgaa aaaaacgcgt cttccatatc gggcatggcg acgagaaagt
     1561 ggttggagag gttcatatca gcgtttgtcg ggattttcta tcgggttgga aatcatgcag
     1621 gcgccggcaa gcaggttgcc ggaagtatcg gcttgcaccc catcggtttg cggtatgccg
     1681 ccgccgaaac aggaaaccgc gcttaaggaa tttttcggcg agccttggat gattttatcg
     1741 ctgtacacca aataggcgaa ggttttgcgt ttggggtcgt aataacggac aatctgccgg
     1801 ctcttgaacg cgaagctcgc accgtgtttg aaaacttctt tcggtttgcg cacggcggtt
     1861 tcgtcaaaag aaatcgaaga tgccgtctga acgcacgaaa ccgatgcgtc ggacgcgtcc
     1921 tcttccaaat tgaccatttc cttcaagccg cctttttttg catacgaaat ataacaggca
     1981 accccttgaa cgtcgggatc gtcgaatcct tccacttcga tacggtcgtt tttgcccagt
     2041 atgttgaaaa cggtacttgc ccgtccgatt ttatcggttt cgccgctgcc gcaggcagtc
     2101 agcaggacgg cggcagacag cagtagcagt ctgttcatca aaatttcctt atcggttgaa
     2161 tccccgtttt ccgtgaaggc ggcagggctt gctttgtttg gaggggcgca cgttcccaaa
     2221 atcgggcaac atacggtatg cggcttaatg tgctaccctg tgtgtcggaa cacaatatcc
     2281 gttgcggcat tgaaaatatg acgcacaata taaggctgtt tgagccgatt gcaagtatcc
     2341 gcgcaaagaa ggcgcaagat tgggcaaacg gcattttcag acggcataac tgacagtata
     2401 atccaaacgt ccggctgctt tcgtgcagcc ttcagtatta tccaactttt tccgaaggtc
     2461 gaaccatgcg ctacaaaccc cttctgcttg ccctgatgct cgttttttcc acgcccgccg
     2521 ttgccgccca cgacgcggca cacaaccgtt ccgccgaagt gaaaaaacag acgaagaaca
     2581 aaaaagaaca gcccgaagcg gcggaaggca aaaaagaaaa aggcaaaaat ggcgcagtga
     2641 aagataaaaa aacaggcggc aaagaggcgg caaaagaggg caaagagtcc aaaaaaaccg
     2701 ccaaaaaccg caaagaagca gagaaggagg cgacatccag gcagtctgcg cgcaaaggac
     2761 gcgaagggga taagaaatcg aaggcggaac acaaaaaggc acatggcaag tccgtgtccg
     2821 gatccaaaga aaaaaacgca aaaacacagc ctgaaaacaa acaaggcaaa aaagaggcaa
     2881 aaggacaggg caatccgcgc aagggcggca aggcggaaaa agacactgtt tctgcaaata
     2941 aaaaagtccg ttccgacaag aacggcaaag cagtgaaaca ggacaaaaaa tacagggaag
     3001 agaaaaatgc caaaaccgat tccgacgaat tgaaagccgc cgttgccgct gccaccaatg
     3061 atgtcgaaaa caaaaaagcc ctgctcaaac aaagcgaagg aatgctgctt catgtcagca
     3121 attccctcaa acagcttcag gaagagcgta tccgccaaga gcgtatccgt caggcgcgcg
     3181 gcaaccttgc ttccgtcaac cgcaaacagc gcgaggcttg ggacaagttc caaaaactca
     3241 ataccgagct gaaccgtttg aaaacggaag tcgccgctac gaaagcgcag atttcccgtt
     3301 tcgtatcggg gaactataaa aacagccagc cgaatgcggt tgccctgttc ctgaaaaacg
     3361 ccgaaccggg tcagaaaaac cgctttttgc gttatacgcg ttatgtaaac gcctccaatc
     3421 gggaagttgt caaggatttg gaaaaacagc agaaggcttt ggcggtacaa gagcagaaaa
     3481 tcaacaatga gcttgcccgt ttgaagaaaa ttcaggcaaa cgtgcaatct ctgctgaaaa
     3541 aacagggtgt aaccgatgcg gcggaacaga cggaaagccg cagacagaat gccaaaatcg
     3601 ccaaagatgc ccgaaaactg ctggaacaga aagggaacga gcagcagctg aacaagctct
     3661 tgagcaattt ggagaagaaa aaggccgaac accgcattca ggatgcggaa gcaaaaagaa
     3721 aattggctga agccagactg gcggcagccg aaaaagccag aaaagaagcg gcgcagcaga
     3781 aggctgaagc acgacgtgcg gaaatgtcca acctgaccgc cgaagacagg aacatccaag
     3841 cgccttcggt tatgggtatc ggcagtgccg acggtttcag ccgcatgcaa ggacgtttga
     3901 aaaaaccggt tgacggtgtg ccgaccggac ttttcgggca gaaccggagc ggcggcgatg
     3961 tttggaaagg cgtgttctat tccactgcac cggcaacggt tgaaagcatt gcgccgggaa
     4021 cggtaagcta tgcggacgag ttggacggct acggcaaagt ggtcgtggtc gatcacggcg
     4081 agaactacat cagcatctat gccggtttga gcgaaatttc cgtcggcaag ggttatatgg
     4141 tcgcggcagg aagcaaaatc ggctcgagcg ggtcgctgcc ggacggggaa gaggggcttt
     4201 acctgcaaat acgttatcaa ggtcaggtat tgaacccttc gagctggata cgttgatcgg
     4261 attgccgaaa cggtaggctt tatgcaaatc gtgccgatat ggtgcgctgt tccgtgaagt
     4321 ttgccgtttg ccgtacctgt attttccggt ttttggaaat caagagagaa agttaaagaa
     4381 gaatgtcgaa acctgttttt aagaaaatcg cactttatac tttgggtgca atcagcggcg
     4441 tggccgtcag tctggcggtg cagggttttg ccgccgagaa ggacaggcgg gataacgaag
     4501 tcctgccggt gcaatccatc cgcacaatgg cggaggttta cggtcaaatc aaggcaaact
     4561 actatcagga caaacccgat gccgatttgt ttgaaggtgc gatgaagggt atggtggccg
     4621 gtttggatcc gcattccgaa tatatggata aaaaaggtta tgccgagata aaggagtcca
     4681 ccagcggcga atttggcggc ttggggatgg aaatcgggca ggaagacgga tttgtcaaag
     4741 tggtttcgcc gattgaggac acgcctgcgg aacgggcggg ggtgaaaagc ggcgatttca
     4801 ttgtgaaaat cgataatgtt tcgacacgcg gcatgacggt cagcgaagcg gtgaagaaaa
     4861 tgcggggcaa gccgggtacg aagattactt tgacgctgtc gcgcaaaaat gccgacaagc
     4921 cgatagtcgt caacctgacc cgtgccatta ttaaagtgaa aagcgtccgc catcacctga
     4981 tcgaacccga ttacggctat atccgcgtgt cgcagttcca agagcggacg gtcgaaagcg
     5041 tcaataccgc cgcaaaagag ctggtaaagg aaaataaagg aaaaccgctc aaggggctgg
     5101 tgttggattt gcgcgacgac cccggcgggc ttttgactgg cgcggtcggc gtgtcggcgg
     5161 catttctgcc gtctgaagca gtcgtcgtca gcaccaaggg acgcgacggc aaagaccgca
     5221 tggtactgaa agccattcct gaagattatg tgtacgggat gggcggcgat tcgttggcgg
     5281 gcattcctgc cgagttgaaa accataccga tgacggttct gattaattcg ggttcggctt
     5341 ccgcgtcgga gattgtcgca ggtgcattgc aggatcataa acgcgcggtc atcgtcggta
     5401 cgcagagctt cggcaaaggt tcggttcaga ctttgattcc tttgtccaac ggcagcgcgg
     5461 tcaagctgac aacggcactg tattatacgc cgaacgaccg ttctattcag gcgcagggga
     5521 ttgttcccga tgtcgaagta aaagataagg aacgcatttt tgaaagccgc gaggcggatt
     5581 tggtcggaca catcggcaat cctttgggcg gcgaggatgt gaacagtgaa acccttgccg
     5641 tgccgcttga aaaagatgcg gataagcccg ctgtaaaaga aaaaggtaaa aagaaaaagg
     5701 acgaggattt gtcttcaagg cggattccca accctgccaa agacgaccag ttgcggaaag
     5761 ctttggattt agtcaagtcg cccgagcagt ggcagaagtc tttggggctg gcggcgaaaa
     5821 agccggtttc aaataaagat aagaaagata aaaaagataa gaagtaggtt ttgacgatgc
     5881 cgtctgaaag gatttcagac ggcatattat gtttgaaagg acaggttatg agcgattttt
     5941 taccggaatt tgaaccgtgc gg
//
LOCUS       DAWKOX010000125         5813 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.125, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000125 DAWKOX010000000
VERSION     DAWKOX010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.125"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(270..383)
                     /gene="rrf"
                     /locus_tag="WJK78_001561"
     rRNA            complement(270..383)
                     /gene="rrf"
                     /locus_tag="WJK78_001561"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(480..3371)
                     /locus_tag="WJK78_001562"
     rRNA            complement(480..3371)
                     /locus_tag="WJK78_001562"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3777..3852)
                     /locus_tag="WJK78_001563"
     tRNA            complement(3777..3852)
                     /locus_tag="WJK78_001563"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3817..3819),aa:Ala,seq:tgc)
     gene            complement(3858..3934)
                     /locus_tag="WJK78_001564"
     tRNA            complement(3858..3934)
                     /locus_tag="WJK78_001564"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3898..3900),aa:Ile,seq:gat)
     gene            complement(4036..5576)
                     /locus_tag="WJK78_001565"
     rRNA            complement(4036..5576)
                     /locus_tag="WJK78_001565"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1273 a         1690 c         1239 g         1611 t
ORIGIN      
        1 gatgtttacc gccgcaaggg agaaggcgca ggagaacagc atacagaaca gcacgaacat
       61 tttcttcatg gtttttcctt taagggttgc aaacaataaa ccgcatcttg cgacgataaa
      121 acgagtcatt ctaaaatgaa tatcccaaag tttcaagccg ttcctccgca aacccgaccg
      181 gacgccgtac ggatactgtc ccgccatccc cgacattttt tccgggcaaa gcaaaaaccc
      241 ccgaataatc gggggttttc tgaaagggtg tttggcagtg acctactttc gcatggaaga
      301 accacactat catcggcgct gagtcgtttc acggtcctgt tcgggatggg aaggcgtggg
      361 accaactcgc tatggccgcc aaacttaaac tgttacaaat cggtaaagcc ttaatcaata
      421 tattcggtaa tgactgaatc agtcagtaag cttttatctc ttgaagttct tcaaatgata
      481 gagtcaagcc tcacgagcaa ttagtatggg ttagcttcac gcgttaccgc gcttccacac
      541 cccacctatc aacgtcctgg tctcgaacga ctctttagtg cggttaaacc gcaagggaag
      601 tctcatcttc aggcgagttt cgcgcttaga tgctttcagc gcttatctct tccgaactta
      661 gctacccggc tatgcaactg gcgttacaac cggtacacca gaggttcgtc cactccggtc
      721 ctctcgtact aggagcagcc cccgtcaaac ttccaacgcc cactgcagat agggaccaaa
      781 ctgtctcacg acgttttaaa cccagctcac gtaccacttt aaatggcgaa cagccatacc
      841 cttgggaccg actacagccc caggatgtga tgagccgaca tcgaggtgcc aaactccgcc
      901 gtcgatatga actcttgggc ggaatcagcc tgttatcccc ggagtacctt ttatccgttg
      961 agcgatggcc cttccataca gaaccaccgg atcactatgt cctgctttcg cacctgctcg
     1021 acttgtcggt ctcgcagtta agctaccttt tgccattgca ctatcagtcc gatttccgac
     1081 cggacctagg taaccttcga actcctccgt tacgctttgg gaggagaccg ccccagtcaa
     1141 actgcctacc atgcacggtc cccgacccgg atgacgggtc tgggttagaa cctcaaagac
     1201 accagggtgg tatttcaagg acggctccac agagactggc gtctctgctt caaagcctcc
     1261 cacctatcct acacaagtga cttcaaagtc caatgcaaag ctacagtaaa ggttcacggg
     1321 gtctttccgt ctagcagcgg gtagattgca tcttcacaac cacttcaact tcgctgagtc
     1381 tcaggaggag acagtgtggc catcgttacg ccattcgtgc gggtcggaac ttacccgaca
     1441 aggaatttcg ctaccttagg accgttatag ttacggccgc cgtttactgg ggcttcgatc
     1501 cgatgctctc acatcttcaa ttaaccttcc agcaccgggc aggcgtcaca ccctatacgt
     1561 ccactttcgt gttagcagag tgctgtgttt ttaataaaca gtcgcagcca cctattctct
     1621 gcgaccctcc agggcttacg gagcaagtcc ttaaccttag agggcatacc ttctcccgaa
     1681 gttacggtat caatttgccg agttccttct cctgagttct ctcaagcgcc ttagaattct
     1741 catcctgccc acctgtgtcg gtttgcggta cggttcaatt caaactgaag cttagtggct
     1801 tttcctggaa gcgtggtatc ggttacttca tgtccgtaga cactcgtcat cacttctcgg
     1861 tgttaagaag acccggattt gcctaagtct tccacctacc ggcttaaaca agctattcca
     1921 acagcttgcc aacctaacct tctccgtccc cacatcgcat ttgaatcaag tacaggaata
     1981 ttaacctgtt tcccatcgac tacgcatttc tgcctcgcct taggggccga ctcaccctac
     2041 gccgatgaac gttgcgtagg aaaccttggg ctttcggcga gcgggctttt cacccgcttt
     2101 atcgctactc atgtcaacat tcgcacttct gatacctcca gcacacttta caatgcacct
     2161 tcatcggcct acagaacgct cccctaccat gccagtaaac tggcatccgc agcttcggtt
     2221 atagatttga gccccgttac atcttccgcg caggacgact cgaccagtga gctattacgc
     2281 tttctttaaa tgatggctgc ttctaagcca acatcctggc tgtctgggcc ttcccacttc
     2341 gtttaccact taatctatca ttggggacct tagctggcgg tctgggttgt ttccctcttg
     2401 acaacggacg ttagcacccg ctgtctgtct cccgaggaac cacttgatgg tattctgagt
     2461 ttgccatggg ttggtaagtt gcaataaccc cctagccata acagtgcttt acccccatca
     2521 gtgtcttgct cgaggcacta cctaaatagt tttcggggag aaccagctat ctccgagttt
     2581 gtttagcctt tcacccctat ccacagctca tccccgcatt ttgcaacatg cgtgggttcg
     2641 gtcctccagt acctgttacg gcaccttcaa cctggccatg gatagatcac tcggtttcgg
     2701 gtctacaccc agcaactcat cgccctatta agactcggtt tccctacgcc tcccctattc
     2761 ggttaagctc gctactgaat gtaagtcgtt gacccattat acaaaaggta cgcagtcaca
     2821 cctctagggt gctcccactg tttgtatgca tcaggtttca ggttctgttt cactcccctc
     2881 ccggggttct tttcgccttt ccctcacggt actggttcac tatcggtcga tgatgagtat
     2941 ttagccttgg aggatggtcc ccccatattc agacaggatt tcacgtgtcc cgccctactt
     3001 ttcgtacgct tagtaccgct gttgagattt cgaatacggg actgtcaccc actatggtca
     3061 agcttcccag cttgttcttc tatctcgaca gttattacgt acaggctcct ccgcgttcgc
     3121 tcgccactac ttgcggaatc tcggttgatt tcttttcctc cgggtactta gatggttcag
     3181 ttctccgggt tcgcttctct aagtctatgt attcaactta ggatactgca cagaatgcag
     3241 tgggtttccc cattcggaca tcgcgggatc attgctttat tgccagctcc cccgcgcttt
     3301 tcgcaggctt acacgtcctt cgtcgcctat catcgccaag gcatccacct gatgcactta
     3361 ttcacttgac tctatcattt caagaacttc tttgactttg cctaacattc cgttgactag
     3421 aacatcagac ttgaatttcc tactttgata aagcttactg ctttgttgtg tcttaatcct
     3481 gccttttgtg tttcaggatt aagtcgatac aatcatcacc caaatactgt gtttgttttc
     3541 ttttctctcg cgagagattt ttatcctttg caaagaataa aaaatcaaaa caaacgcttt
     3601 gtctttgttt gttgatttcg gctttccaat ttgttaaaga tcgatgcgtt cgatattgct
     3661 atctactgtg caaatcaaaa cgagctgatt attatatcag cattttgttc ttggtcaagt
     3721 gtgacgtcgc cctgaatgga ttctgttcca ttcttccgtt ttgatttgta cagtattggt
     3781 ggaggcaaac gggatcgaac cgatgacccc ctgcttgcaa agcaggtgct ctaccaactg
     3841 agctatgccc ccgttcttgg tgggtctggg aggacttgaa cctccgaccc cacgcttatc
     3901 aagcgtgtgc tctaaccagc tgagctacaa acccggattc tcttcttaag cgaatcttgc
     3961 cttcactcaa gcttcttccg catctttttc agtttaccga taagtgtgaa tgcctaaagc
     4021 ctcttctttc tctagaaagg aggtgatcca gccgcaggtt cccctacggc taccttgtta
     4081 cgacttcacc ccagtcatga agcataccgt ggtaagcgga ccccttgcgg ttaccctacc
     4141 tacttctggt atcccccact cccatggtgt gacgggcggt gtgtacaaga cccgggaacg
     4201 tattcaccgc agtatgctga cctgcgatta ctagcgattc cgacttcatg cactcgagtt
     4261 gcagagtgca atccggacta cgatcggttt tgtgagattg gctccgcctc gcggcttggc
     4321 taccctctgt accgaccatt gtatgacgtg tgaagccctg gtcataaggg ccatgaggac
     4381 ttgacgtcat ccccaccttc ctccggcttg tcaccggcag tctcattaga gtgcccaact
     4441 gaatgatggc aactaatgac aagggttgcg ctcgttgcgg gacttaaccc aacatctcac
     4501 gacacgagct gacgacagcc atgcagcacc tgtgttacgg ctcccgaagg cactcctccg
     4561 tctctggagg attccgtaca tgtcaagacc aggtaaggtt cttcgcgttg catcgaatta
     4621 atccacatca tccaccgctt gtgcgggtcc ccgtcaattc ctttgagttt taatcttgcg
     4681 accgtactcc ccaggcggtc aatttcacgc gttagctacg ctactaagca atcaagttgc
     4741 ccaacagcta attgacatcg tttagggcgt ggactaccag ggtatctaat cctgtttgct
     4801 acccacgctt tcgggcatga acgtcagtgt tgtcccagga ggctgccttc gccatcggta
     4861 ttcctccaca tctctacgca tttcactgct acacgtggaa ttctacctcc ctctgacaca
     4921 ctcgagtcac ccagttcaga acgcagttcc cgggttgagc ccggggattt cacatcctgc
     4981 ttaagtaacc gtctgcgccc gctttacgcc cagtaattcc gattaacgct cgcaccctac
     5041 gtattaccgc ggctgctggc acgtagttag ccggtgctta ttcttcaggt accgtcatca
     5101 gccgctggta ttagcaacag ccttttcttc cctgacaaaa gtcctttaca acccgaaggc
     5161 cttcttcaga cacgcggcat ggctggatca ggcttgcgcc cattgtccaa aattccccac
     5221 tgctgcctcc cgtaggagtc tgggccgtgt ctcagtccca gtgtggcgga tcatcctctc
     5281 agacccgcta ctgatcgtcg ccttggtagg cctttacccc accaactagc taatcagata
     5341 tcggccgctc gaatagcgca aggcccaaag gtcccctgct ttctctctca agacgtatgc
     5401 ggtattagct gatctttcga tcagttatcc cccactactc ggtacgttcc gatatgttac
     5461 tcacccgttc gccactcgcc acccgagaag caagcttctc tgtgctgccg tccgacttgc
     5521 atgtgtaaag catgccgcca gcgttcaatc tgagccagga tcaaactctt atgttcaatc
     5581 tctaactttt taacttctgg tctgcttcaa agaaaccaac aggacaatgt tcaaaacatt
     5641 atcttgtctg tctttcaaac agtgtgaggc tcaaggcact cacacttatc ggtaatctgt
     5701 tttgttaaag agcgttgcga attataaagt atctcttccg cctgtcaaga tatctctcga
     5761 tatccccaac attctgtgct atacttttca gttcgtccgc cgcttctgca gca
//
LOCUS       DAWKOX010000126         5792 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.126, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000126 DAWKOX010000000
VERSION     DAWKOX010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5792)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5792)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5792
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.126"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(129..890)
                     /locus_tag="WJK78_001566"
     CDS             complement(129..890)
                     /locus_tag="WJK78_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598475.1"
                     /translation="MDVNKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRDHVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMALFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            990..1241
                     /locus_tag="WJK78_001567"
     CDS             990..1241
                     /locus_tag="WJK78_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598476.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            1293..2099
                     /locus_tag="WJK78_001568"
     CDS             1293..2099
                     /locus_tag="WJK78_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ7598477.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSEDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALKKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            2406..3929
                     /locus_tag="WJK78_001569"
     CDS             2406..3929
                     /locus_tag="WJK78_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ7598478.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTDLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVES"
     gene            4027..5439
                     /gene="trkA"
                     /locus_tag="WJK78_001570"
     CDS             4027..5439
                     /gene="trkA"
                     /locus_tag="WJK78_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ7598479.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRSRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAETGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
BASE COUNT         1470 a         1726 c         1402 g         1194 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat attaatattt tgcgcccgtt
       61 ccgtgaggct ttcaagtcgg atgagaatgc aaatgccgtc tgaacacggc tttcagacgg
      121 catgacggtc agcgtttgta ttttaactcg tacttgatgt cgttgaggat tttgcggaca
      181 tcgtgttcca acacgtcttc gaccaccgcg cccgcctgct cgtgcagcat ttgctggagc
      241 tgataagtaa agagtgccat ctgcttttgc accgccgttc gaatgatgcc gttgacggta
      301 tcggtcagat gcggacgcag gcgtttgatc agccgttcgg tcagctcctg ttcggacagg
      361 cagaacactt cgcgccggtt gacggctttc gggttcagga tattgatttg gacgggcatc
      421 aacgcctctt ccgcaccgcc ttcgccgttt tccgcaaccc cgtctgccgc cgtacccgat
      481 tctgccgcat cggcgttttc cccgccttca atctgtccgg tttcaaattc ggcactgtct
      541 tttttggcat cgaacaggat tctccgccgc gattcgatgt gtttttccga aaccgacatt
      601 tgcagggaag cctgcgcgtt gagccagttt tcctgaagga caatcatcgg gtcggtttcg
      661 acttcctcgc cgcaatcggc aacggcggca ttgtgttcct cctgccattt tttcagatac
      721 gccttcaaca catggtctcg gctctcatcg tccagtttcg gcacaggcgc gtccgttccg
      781 gtttcagagg ggcgggacag cggcgcgtaa gtcggcactg ccttcatacg gcgcgtctga
      841 cgcaggtttt ccaaacgttt ttcccaattc ggctctttat tcacatccat tttcggcttc
      901 cggttcttaa tctttgcagg cagacaaacc cgcgcccaaa gcgcggtttg atataatggc
      961 gcattttaac agattcgcga ggatacatca tgggcagcat cgaacagcgt ttggaatatc
     1021 tggaagaggc gaacgacgtg ctgcgtatgc agaaccacgt cctgtccacc gcattcaaag
     1081 ccttaatccg cgcccttccc gccgaaaccg ccgaaatcgc ggtcgagtcg attcagcttg
     1141 cttttgagga cgccttggca gaattgagct atgaggacag cccccatacc gatttgttcc
     1201 acgacgttac ttatgcgttt ttccgtgaaa aagaacgtta attttatgtt aaactgattt
     1261 tttaggcttt ttgattaccg aaaggaattt tgatgaatat gaaaaaatgg attgccgccg
     1321 cccttgcctg ttccgcgctc gcgctgtctg cctgcggcgg tcagggtaaa gatgccgccg
     1381 cgcccgccgc aaaccccgac aaagtgtacc gcgtggcttc caacgccgag tttgccccct
     1441 ttgaatcttt agactcgaaa ggcaatgtcg aaggtttcga tgtggatttg atgaacgcga
     1501 tggcgaaggc gggcaatttt aaaatcgaat tcaaacacca gccgtgggac agccttttcc
     1561 ccgccttgaa caacggcgat gcggacgttg tgatgtcggg cgtaaccatt accgacgacc
     1621 gcaaacagtc tatggacttc agcgacccgt attttgaaat cacccaagtc gtcctcgttc
     1681 cgaaaggcaa aaaaatatct tcttccgaag atttgaaaaa catgaacaaa gtcggcgtgg
     1741 taaccggcta cacgggcgat ttctccgtat ccaaactctt gggcaacgac aacccgaaaa
     1801 tcgcgcgctt tgaaaacgtt cccctgatta tcaaagaact ggaaaacggc ggcttagatt
     1861 ccgtagtcag cgacagcgcg gtcatcgcca attatgtgaa aaacaatccg accaaaggaa
     1921 tggacttcgt taccctgccc gacttcacca ccgaacacta cggcatcgcg gtacgcaaag
     1981 gcgacgaagc aaccgtcaaa atgctgaacg atgcgttgaa aaaagtacgc gaaagcggcg
     2041 aatacgacaa aatctacgcc aaatattttg caaaagaaga cggacaggcc gcaaaataag
     2101 cccgcccatc cgaacacaat gccgtctgaa gccctttcag acggcattgt tcatcaatcg
     2161 gcctacaatg aactgcctgc tgatttctcc ctaccgcaaa gcaacaggca aagattacaa
     2221 atatcaaaat ccgagtaaaa cagtatttta ttaaaacaaa ttgataatca agagattaga
     2281 attatgtatt gtctttaccg tacaaacgct ggcactattt caacctgata aaaaacagcc
     2341 ttcaaaaagg ttgcttaaaa caacagcaga cacttaccgc cacaaccttg aaaaggaaca
     2401 caatcatgac cgtcatcaaa caggaagact ttatccaaag catttgcgat gccttccaat
     2461 tcatcagcta ctaccatccc aaagactaca tcgacgcgct ctataaagcg tggcagaaag
     2521 aagaaaaccc cgccgccaaa gacgcgatga cgcagatttt ggtcaacagc cgcatgtgtg
     2581 ccgaaaacaa ccgccccatc tgccaagaca caggtatcgc aaccgtgttt ttgaaagtcg
     2641 gtatggatgt gcagtgggat gcggacatga gcgtggaaga aatggttaac gaaggcgtac
     2701 gccgcgccta cacttgggaa ggcaatacgc tgcgcgcttc cgttctcgcc gacccggccg
     2761 gcaaacgtca aaacaccaaa gacaacacgc ccgccgtcat ccatatgagc atcgtgccgg
     2821 gcgacaaagt cgaagtaacc tgcgcggcaa aaggcggcgg ttctgaaaac aaatccaaac
     2881 tcgccatgct caatccttcc gacaacatcg tcgattgggt attgaaaacc atcccgacga
     2941 tgggcgcggg ctggtgtcct cccggcatct tgggcatcgg catcggcggc acgcctgaaa
     3001 aagccgtgtt gatggcaaaa gagtccctga tgagccacat cgacatccaa gaattgcagg
     3061 aaaaagccgc gtccggcgcg gaattgtcca ccaccgaagc cctgcgcctc gaactctttg
     3121 aaaaagtcaa cgcgctgggc atcggcgcac aaggtttggg cggtctgacc accgtgttgg
     3181 acgtgaaaat cctcgattac ccgacccacg ccgcctccaa accgattgcc atgattccga
     3241 actgcgccgc cacccgccac gtcgaatttg aattggacgg ctcaggccct gtcgaactca
     3301 cgccgccgcg cgtcgaagac tggcccgatt tgacttacag ccccgacaac ggcaaacgcg
     3361 tcgatgtcga caagctgacc aaagaagaag tggcaagctg gaaaaccggc gacgtattgc
     3421 tgttgaacgg caaaatcctc accggccgcg atgccgcaca caaacgcctc gtcgatatgc
     3481 tcaacaaagg cgaagaattg cccgtcgatt tcaccaaccg cctgatttac tacgttggtc
     3541 ccgtcgatcc ggtcggcgat gaagtcgtcg gtccggcagg tccgaccaca gccacccgca
     3601 tggacaaatt cacccgccaa atgctcgaac aaaccgacct cttgggcatg atcggcaaat
     3661 ccgagcgcgg cgtggccacc tgcgaagcca tcgccgacaa caaagccgtg tacctcatgg
     3721 cagtcggcgg cgcggcgtat ctcgtggcaa aagccatcaa atcttccaaa gtcttggcgt
     3781 tccccgaatt gggcatggaa gccatttacg aatttgaagt caaagacatg cccgtaaccg
     3841 tcgccgtaga cagcaaaggc gaatccatcc acgccaccgc cccgccccaa tggcaggcga
     3901 aaatcggcat catccccgtc gaatcttgag gcgccatgcc gtctgaacac aaaatctgcc
     3961 ttcagacggc atttccgccc ccggttgcgg tacaatccac catttcatca ctcggcgacc
     4021 cacaccgtga aaatcctcat tttaggcaac ggacaggtag gttctaccgt cgcacaaaac
     4081 cttgccgcca tacccaacaa cgacgtaacc gttatcgaca tcgacgaaaa agcattgcag
     4141 gaaacaggca gccgcctcga tgtccaaacc gttttcggca acggcgcatc ccccttcaca
     4201 ttagaacgcg ccggcgcgga agatgccgac ttgctgctcg cgctctcccg cagcgacgaa
     4261 accaacatcg tcgcctgcaa agttgccgcc gacctgttca acatccccgg ccgcatcgcg
     4321 cgcgtccgtt ccagcgaata cctcgaatac ctcagcccca agctcgaaaa caacgaaaac
     4381 ggcagccttt ccatattcgg cataaccgaa accatcagcc ccgaacagct cgttaccgaa
     4441 cagcttgccg gcctgataga ctgcccgggc gcattgcagg ttttacgttt tgcagacgac
     4501 cgcgtgcgga tggtcatcat acaggcgcgg cgcggcggac tgcttgtcgg acgcagcatt
     4561 gccgacatcg cccaagattt gcccgacggg gccgactgcc aaatctgcgc cgtttaccgc
     4621 aacaaccgcc tcatcgtccc cgcgccgcaa accgtcatca tcgaaggcga cgaaatccta
     4681 tttgccgccg ccgccgaaaa catcggcgcg gtcatacccg aattgcgccc caaagaaacc
     4741 agcacccgcc gcatcatgat tgccggcggc ggcaacatcg gctaccgtct cgccaagcag
     4801 ctcgaacacg catacaacgt caaaatcatc gaatgccggt cgcgccgtgc cgaatggata
     4861 gccgaaaacc tcgacaacac cctcgtcctg caaggttcgg caaccgacga aaccctgctc
     4921 gacaacgaat acatcgacga aatcgacgta ttctgcgccc tgaccaacga cgacgaaagc
     4981 aacattatgt ccgccctttt ggcgaaaaac ctcggcgcga agcgcgtcat cggcatcgtc
     5041 aaccgctcaa gctacgtcga tttgctcgaa ggcaacaaaa tcgacatcgt cgtctccccc
     5101 cacctcatca ccatcggctc gatactcgcc cacatccggc gcggcgacat cgttgccgtc
     5161 caccccatcc ggcgcggcac ggcggaagcc atcgaagtcg tcgcacacgg cgacaaaaaa
     5221 acttccgcca tcatcggcag gcgcatcagc ggtatcaaat ggccagaagg ctgccacatt
     5281 gccgccgtcg tccgcgccga aaccggcgaa accattatgg gacaccatac cgaaaccgtc
     5341 atccaagacg gcgaccacat catctttttc gtctcgcgcc ggcgcatcct gaacgaactg
     5401 gaaaaactca tccaggtcaa aatgggcttt ttcggataaa ccgccccatt ccggacatat
     5461 tgccgccaag cggtatggaa gcagaaataa tggtaggtgg gcttcagacg gcatccgccc
     5521 tccccgtcat tcccgcgcag gcgggaatct agaccttggg atagcggcaa tattcaaagg
     5581 ttatctgaaa atttagaggt tctagattcc cgttttcacg ggaatgacga agagttgcgg
     5641 gaatctagac cattggaaag cggcaatatt caaaggttag ctgaagcttt agaggttcta
     5701 gattcccgtt tccacaggaa tgacgaaagg tggcgggaat ccagaacgtc gggcaacggc
     5761 aatattcaaa agccgtctga aaatttaaaa gt
//
LOCUS       DAWKOX010000127         5791 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.127, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000127 DAWKOX010000000
VERSION     DAWKOX010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.127"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            131..565
                     /locus_tag="WJK78_001571"
     CDS             131..565
                     /locus_tag="WJK78_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ7598480.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPLNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(578..1442)
                     /locus_tag="WJK78_001572"
                     /pseudo
     CDS             complement(578..1442)
                     /locus_tag="WJK78_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241590.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(1450..2067)
                     /locus_tag="WJK78_001573"
     CDS             complement(1450..2067)
                     /locus_tag="WJK78_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ7598481.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFQTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKSNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(2230..2844)
                     /locus_tag="WJK78_001574"
     CDS             complement(2230..2844)
                     /locus_tag="WJK78_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEZ7598482.1"
                     /translation="MKTSNFSKRTSAMKTFALILAGGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLLGDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQIDLQEG"
     gene            3050..4822
                     /locus_tag="WJK78_001575"
     CDS             3050..4822
                     /locus_tag="WJK78_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ7598483.1"
                     /translation="MILPARFSDGISLSLRLKLLTGLWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRAQIDNQVAEFEKSLKRIAQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQPQQGTTVSLTGASEESLK"
     gene            4819..5475
                     /locus_tag="WJK78_001576"
     CDS             4819..5475
                     /locus_tag="WJK78_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ7598484.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPMLE
                     "
BASE COUNT         1427 a         1639 c         1343 g         1382 t
ORIGIN      
        1 ttccgattcc gccgttatgt ctgcctgccg gacatacgta cgcattatta acaaaagtta
       61 accgcgataa taccatcttt cacacgtcaa tctagtatat ttcctaaaat ttccaacaag
      121 aggaaaagcc gtgccactgc ctgctccctg ccgttttgcc aaacctgccg cctctttttt
      181 aagtatggct ttgctttcct gccagctttc ccacgccgcc acggcttata tccccctgaa
      241 cgattttcaa ccgaactgcg acatacgccg gctcggactg acacagggtc agcacaatga
      301 actgcgtaaa atccgcgccg ccttcaaaat ggcgggcgac agggcgcgtt tgaaggttat
      361 gcattccgaa cacagccgcc gccggtctgt cgtcgaaatc atttcttcgg atgtttttaa
      421 tcggaacgag gcgcgcgatt atgtcgaaag ccgctatttg tccggtatgg attttgcggt
      481 ggacgaattg gaaatccaac accgcttctt ccatatcctc acaccgcaac agcagcaaat
      541 gtggctttct tcctgcctca aataatcccc gaaacgctca cggcgcacgt tgctccggca
      601 gcctgcccgc ccagtcgcag gcaaactgcc acgcggaacg tcccgaacgg ctgccccgcg
      661 tctgcgccca ctgcaatgcc gccatctgtg cggtttcatc atacggcacg ccgaaatctt
      721 ccagccaatt ttgcaccgcc gccagataat cgttttgatc gaacggataa aaactgagcc
      781 acaatccgaa tcggtcggac agggatattt tttcttccac cgcttctttc tgatggactt
      841 cccccccgca tccccgtcgt accggcattc tcgtcaaaat attcgggcat caggtgccgt
      901 ctgttggaag tcgcgtaaac caaaacgttg gcgcaacgtt gagacagacc gccgtctaac
      961 gcggttttca atgccttata ggtttcatcg ccgctttcaa acgacaaatc gtcgcaaaat
     1021 acgataaatt tttccggacg ttccttcaaa agcgtcaaca ggtaaggcag gccgattaaa
     1081 tcgcttttat cgacttcgat caggcgcaat cccttattcg catattcgtg tagcagggct
     1141 ttgaccagcg aggatttgcc tgttccgcgc gcgccgctca tcaatacgtt attcgcgggt
     1201 ctgccgacaa tgaactgttc ggtattacgc accagcaatt cggtttgcct gccgactccc
     1261 gccagcctta ccaagggaaa ggtgtgcgga tcgggcaagt gttccaaaaa accttttttg
     1321 cccgcactct gccagcggaa ggcaagcgcg ttccaatccg tatgcccggg ttcgggcgga
     1381 agcacggcat ccaaacgccg caaaacggca taggctttat cgagaaattc gttcaattcc
     1441 atctctacct cactttgcat atctttgcgc catcagccgt tcgacggtgt cgacgattgc
     1501 ctgcgtattc ggatcgattt cgatgttgat cctgtcgccg acctttctgc tgccgaacag
     1561 cgtccgttcc aaagtttcgg gaatcagatg gacattgaaa cggccgtctt cgactttgcc
     1621 tatggtcagg ctgcaaccgt ccaagccgac gaaccctttg gtcaggatat agggtttgag
     1681 ttcatgcggg agcgaaaacc aaaccgtgcg gttgaacccg tcccgttcga tttcgacaat
     1741 aggcacggtt gccataatgt gtccgctcat gacgtgtccg ccgatttcgt ctccgaaacg
     1801 cgccgcccgt tcgatgttga cgcaatcgcc ttccttcagc agccccaaat tgctttttgc
     1861 caaagtttcc gccattaaat cgaagctgac gcggtttcct tcgatttcgg taatcgtcag
     1921 gcagcagccg ttattggcaa ccgatgcgcc gcgttgcaga ttgtccgccg cctcttgcgg
     1981 aagctcgacg acataagtct gaaatgcctc cgacgggcgg tggattgccg tcagttttcc
     2041 caatccttga acaatgcctg taaacataat cctgtttccc tgtgtcggta aaaatggtgc
     2101 aaattgtagc atctccccgc gaaaaatgcc gtctgaaatg ccttcagaca gcattatgcc
     2161 tccgattcgg gcaaaaaccg cccggtatgg cttgaccttt cctttccacg ccggtcggcg
     2221 gtcttgccct tatccctcct gcaaatcgat ttgcgtgttc aagtcggcaa aatgcccgtc
     2281 aaactcgaat ctgaccgacc gcgccctttg ctgctgcaac cagcttctta atgttttcat
     2341 acccgaaaac agatagggaa tcgcgctttg cagaatctgc gggcggatat acataatgtt
     2401 gtagtgcatc gttatcggcg tttccacata atacgcattg cacaacggtg tgcgtttcga
     2461 cacggtttca aacctcgcca ccaaatcgcc cagcagatac ggcatatcgc acggcacaac
     2521 caaaagccag tcggcagtcg ccaactgcaa atcgttggct gcggtacaca atgccgaaag
     2581 cgggccgaaa tgctgccact gccgtgcgtc cggaaaaata tgcggacttc ttcgagcata
     2641 ttcttccaaa ttccggttgg tgctgatggc gatatggctg acctgcggcc tgaccctgtc
     2701 gatgacatga tctatcagtg ccttaccccc caaaagagca agccctttgt cctcgcctcc
     2761 catacggctc gcctgaccgc cggccagtat cagggcaaaa gttttcattg cggatgttct
     2821 cttggaaaag ttcgaggttt tcatgattgc agtctgccgt tcccaatgac tcaaaatgcc
     2881 gtctgaagca gacggcaaat aaattcatat tatctgaatt ttatcataac atgatttaac
     2941 actgaagcgg tgcggattaa gttttcctta accaattctt tctgagcagt tgtatctaat
     3001 tccaaagaat gatattgttt gcattattta gaacaatttt tcgccgagca tgatactgcc
     3061 agcccgtttt tcagacggca tcagcctttc cctgcgcctg aaactcctga ccggactgtg
     3121 ggtcgggttg gcggcattgt ctgtcgtttt gacactgctg ctctctttgc gtctggaaaa
     3181 cgcggcctcc gtcatcgaag aggcgggcaa cttgagaatg caggcatacc gtctggcata
     3241 catggcgggt gaaggctcgc cccgtgcgca aattgacaat caggttgccg aatttgaaaa
     3301 aagtttaaaa cgcattgccc aaagcgatgc catccatccg ctgattcctt cggacacccc
     3361 tcttgcttat gatttgatac aatccatgct gattatagat tggcaggcac acatcctccc
     3421 cccgctccag tcctaccggc gaccgactca ggtcgatctc taccgctttg ccggaaacat
     3481 cgaactgttt ttgcaggcat tggaaaatgc caacgaaaaa aacacatggt ggctcaggcg
     3541 ttttcaatgg gcaattatgt tgatgacgct ggtgtcgtct gtactgatgc tgttttggca
     3601 ccagatttgg gttatccggc cgctgcaggc gttaagggaa ggtgcggaac gcatcggacg
     3661 gaggtgtttc gatattccgg ttcccgaagg cggtacgccg gaattcaaac aggtcgggcg
     3721 ttgtttcaat caaatgggcg gcaggttgaa aattttatat gatgatttgg aaggacaagt
     3781 cgccgagcag acacgcagtc tcgaaaaaca aaatcaaaac ctgaccctgc tgtaccaaac
     3841 tacacgggac ctgcaccaat cctacatacc gcaacaggct gcagaacatt ttctaaaccg
     3901 tatcctgccc gccgtaggag cagattccgg cagagtttgt ttggacggcg gatccgatgt
     3961 ttatgtttcc attcatcatg cggattgcgg cacagcagct tcggatttgg ggaagtacca
     4021 tgaggaaatc ttccccattg agtaccagaa cgaaacattg ggcaggctgt tgctcagctt
     4081 tccaaacggc atttctcttg atgaagacga ccgcatcctg cttcaaacac taggcaggca
     4141 attgggcgta tcgcttgccg gcgcaaaaca ggaggaagaa aaacgcctgc ttgcagtatt
     4201 gcaggaacgc aacctgattg cgcaaggatt acatgacagc atcgcacaag cattaacgtt
     4261 cctaaaccta caggtacaga tgctggaaac cgcctttgcc gaaaacaaac gggaggaagc
     4321 cgcagaaaac atcggcttca tcaaaacagg cgtgcaggaa tgttatgaag atgtccgcga
     4381 actgctgctc aacttccgta ccaaaatcag caataaagaa tttcccgaag ccgttgccga
     4441 cctattcgcc cgctttacgc aacaaaccgg gataacggtc gaaaccgcct gggaaaacgg
     4501 ttcgttcctg ccgcctcagg aagcgcagct ccaaatgatt tttatcctgc aggaaagcct
     4561 gtccaacatc cgcaaacacg cccgcgccac ccatgtaaaa ttcacccttt ccgaacacgg
     4621 cggacgcttt accatgacca tccaagacaa cggacaaggt ttcgacacgg agaaaatagg
     4681 agaacctacg ggcagccatg tcggactgca catcatgcag gagcgtgcca agcgcatcca
     4741 tgccgtttta gaaatccgtt cccaacccca acagggaacc accgtctcat tgacgggtgc
     4801 atctgaagaa agcttgaaat gaccattaaa attattctga tagacgacca caccctcttc
     4861 cgcagcggca ttaaagccct tttgtcgcgc caacacggtt ttgaagtcat cggcgaagcc
     4921 gcagacggcc tctcgggcat caaaatgatt agtcggctgc aacccgatgt cgtcctgctc
     4981 gatttggata tgcccggcat gaacggacgc gaagcactct cccaaatcat cagcatcaat
     5041 ccgcagcagg cagtgattat gctgaccgtt tccgaagaca gcgacgactt gaccgaatgt
     5101 attcgcatcg gcgcgcgcgg ttacctgctg aaaaacatca acgctgactt tctgctcgaa
     5161 agcatacgca aagccgccga aggcgataat gtattctcgc ccgagatgac cgccaaactc
     5221 gttaaaagcc tgatttcccc ccaacctgcc caagggacac aggcactctc ctcacttacc
     5281 cctcgcgaac tggaaatctt gggctatctc gccgcagggc acagcaacaa aatcatcgcc
     5341 cgccacctcg atcttgccga atccaccgtc aaagtccacg ttcaaaacct gctccgcaaa
     5401 ctcaacctca gcagccgggt gcaggccgct gtttacgcca tccggcacaa cgtcccccaa
     5461 cccatgctgg aataaggcgg gttcagacgg catattaggg gttttaatcc ccgtacggtc
     5521 attcggataa cagaccaagc atgtaagttt atgcccccat aagtacgctt ggcatagcag
     5581 taatattgtt cggttcagtg ttttccgttt gcccctatct gatactgcaa tatcagctat
     5641 gccgtctgaa aacgcatcat catgatattt tcagacggca taataaaaag cggaaatact
     5701 aatgcagggt aaaatgttcc attccgaatc ccataaatat acaatggctt atatcgttta
     5761 agcatgtgta acccaccctc atatcaatca a
//
LOCUS       DAWKOX010000128         5744 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.128, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000128 DAWKOX010000000
VERSION     DAWKOX010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5744
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.128"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(976..3252)
                     /locus_tag="WJK78_001577"
     CDS             complement(976..3252)
                     /locus_tag="WJK78_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7598485.1"
                     /translation="MAQTTLKPIVLSILLINTPLLAQAHETEQSVDLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     NKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSRADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDNAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPFPGFEALRVYLNRNDYRHDEKAGDAVENFFKNKTQNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSATSEAVKQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            3674..4264
                     /locus_tag="WJK78_001578"
     CDS             3674..4264
                     /locus_tag="WJK78_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ7598486.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRDNLPDCLEITAWTDDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            4327..5385
                     /gene="trpD"
                     /locus_tag="WJK78_001579"
     CDS             4327..5385
                     /gene="trpD"
                     /locus_tag="WJK78_001579"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ7598487.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMRGQVLPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQIAQSISQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLDGKEGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(5537..>5744)
                     /locus_tag="WJK78_001580"
     CDS             complement(5537..>5744)
                     /locus_tag="WJK78_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003792345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7598488.1"
                     /translation="TVVVPNAQSATLLPIIRKKVKPDGIVYTDTFRSYDVLDISEFSH
                     LRKFNGIPKEHLGLHLKKCQWHFK"
BASE COUNT         1404 a         1327 c         1560 g         1453 t
ORIGIN      
        1 gaaactgaac gaattagatt cccgcctgcg cgggaatgac aactcattag ttacctaaca
       61 cttaaaaaac agaaaccttt ccgcgtcatt cccacgaaag tgggaatccg ggaacttaac
      121 gttacagtga tttatcggaa acgactgaaa ccgaagagac cggattcccg cctgcgtggg
      181 aatgacaact cattagttac ttaaaactta aaaaacagaa acctttacgc gtcattccca
      241 cgaaagtggg aatccgggaa cttaacgtta cagtgattta tcggaaacgg ctgaaaccga
      301 acgaattgga ttcccgcctg cgcgggaatg acgactcatt agttacctaa aacttaaaaa
      361 aaacagaaac ctttccgcgt cattcccatg aaagtgggaa tctagaaccc aaatgctaag
      421 gcgatttatc ggaaacggct gaaaacgaag agactggatt cccgcctgcg cgggaatgac
      481 aactcattag ttacctaaaa cttaaaaaac agaaaccttt acgccgtcat tcccacgaaa
      541 gtgggaatct agaacccaaa tgctaaggcg atttatcgga aacggctgaa accgaacgaa
      601 ttggattccc gcctgcgcag gaatgacaac tcattagtta cctaaaactt aaaaaacaga
      661 aacctttaca ccgtcattcc cacgaaagtg ggaatctaga acccaaatgc taaggcgatt
      721 tatcggaaac ggctgaaacc gaatgaattg gattcccgcc tgcgcgggaa tgacgggatc
      781 ttgggtttct gcttttgatt tttctgcttt tgcgagaatg acggcgtgaa agtaagaatg
      841 atgaaacaaa aaaaatggga atgatggcat agtggtttgt tctttgtctt tgccatattt
      901 cctaacaaat tgattaaaaa gaaaaaaggt tttcagaatg ccgtctgaaa accttttttg
      961 tttgcctgtc cgattttaaa acttcacgtt cacgccgccg gtaaagctgc ggcccatttg
     1021 cggcgtatca gagagaaagc tgctgtgggc gtaaacggat tggttgagca ggttgtcggc
     1081 tttgacgtac caattccact cgccatagcg cgtattgcgg cggtagtttg cgccgaggtt
     1141 gagcatatgg tgtccgggcg tgcgcgtttc gtagcgggcg agtttgtttt gggcaaacac
     1201 gcggtagtag tccaaattgg catcgatgcg gtcggtcagc gaggctttca ggtggaagcc
     1261 gaggcgcgca gccggaacgc gaggggcgtt ttggtcgtcc tgcgcgatga aaggacggtt
     1321 gccgtaggca tcttccctgc cgggtaggga cggcaggttt ttcagacggc ctcgtacata
     1381 gtcgccggaa acgccgatgc ggtagcgcgg tgtcggtttg aagtagattt cgccttccgc
     1441 gccgtagaag tccgcaccgg attggttgta gcgcacgagc ttcatttcgc tgtcgtcttc
     1501 gatggatttg gggccgcgtc cgtcgtttaa ggtttgggcg taaatgtagt tgccgaagcg
     1561 gttgcggtag agtgccagat tgtattgcca gcggtcgcct tcgtagccca acgcgagttc
     1621 gatgttgttg gaacgctctt tgttcaggtg tttgttgccg acttcaaaag tgttggtggc
     1681 aacgtgtttg ccgtgtgcgt acagctcttg cgttgacggc aggcgttcct gatgggaggc
     1741 ggtcaggctg agtttgtgtt gcggcgtgaa ataccagttg cccgaaagtg cgaacgagcg
     1801 ggcggtttgg cggtgcgcgc cgaggtcggg cagggggtgg ttgtagtagt tttcccgatc
     1861 aatcaatgct ttgtcgtacc ggatggaggc tttttgtttt tccacgcgta cgccgccttc
     1921 aagcgtgaag ttgtcccagt ttgcctgttc tacaccgaaa aagctgtaat ggcgcacatt
     1981 gttgtcaatc aacatcggtt gtttgaccgc ttcggatgtg gcagataaag cactggattt
     2041 ttgttgtaaa tattgcacgc cccagctgcc tttcagacgg cctatgggtt ggtggcgcaa
     2101 ctcgatgcgg gcgttttgcg ttttgttttt gaagaagttt tccactgcat cgcctgcttt
     2161 ttcgtcgtgg cggtagtcgt tgcggttcaa gtatacgcgc agggcttcaa aaccggggaa
     2221 cggttgcttc cattcggcac ggagttcgta gcgtttgttg cgcaggtcta tccacggtct
     2281 gccgctgtgg gtgtgtgcgt gtgcattatc gtcgtcgtgg aagccgcagc tcaagcccgg
     2341 attgtcgtaa tcgatgtctt cttcggtcaa caggtgcgga taaagctgta aatagcgttt
     2401 gttaatcaag ctcttttgcc agatgatgtc ggcgtggcaa tcatcgtatt cgtggctgtg
     2461 ggcaggcaga ccatattggt cgcgacggtc gctgtacgct acgccgataa aacctttttc
     2521 gccaacccaa gacagcccga tgctgcccgt ttgcgaatcg gcgcggctgt cgggcaggcg
     2581 tttcagattg cggtaacgcg gtacggcgta atcgcccgat ttgcggtaca agccttccgt
     2641 atgcaataca aagtttttgc ccaagccgat attgatgcct gcggatgtca gtttttccaa
     2701 attgccgctg ctcaaacgca atccggcttc gcccgatacg ccgttttcag gcattttttc
     2761 gggaatttta ttgtcggcaa catcaaccag ccccgcgaca ttgcccgaac tatataaaag
     2821 cgtaaccggg ccgcgcagga tttcgacctg ttgcgacaag gcggtatcta ccataatggc
     2881 gtgatcgggc gaaaaatccg ccatatcgcc cgtttcgccg tgatggttca aaaccttaat
     2941 ccgcctgcct gtttgaccgc gtatcaccgg tgcggacgcg ccgccgccgt attgcgaggc
     3001 gtgaataccc ggtacgccgt ccaaagcatc gcctaagttg acggcttttt ggcgcaaggt
     3061 atcgccggag atgattttgt cggaggcggt cgaagtgtgc agcagccccg aagtggcgcg
     3121 cggacggctt ttgccgacga cgctgaccgt ttccaaatcc accgattgct cagtttcatg
     3181 cgcttgggcg aggaggggtg tgttgattaa aagaattgat aaaacaatgg gtttgagtgt
     3241 agtttgtgcc attttggttt ctcgtcgcat ttcaaaagtt tgttattata taacattaca
     3301 ttccttatat cataagattt tgagaacact cagagggcat aggcaaaagt ttttcaaatg
     3361 aaacggttgc ggcatcgggc ggtgtccatt tgtatccgcc gtccttcggg ggcgcggttg
     3421 atgttgacgc agattccgct gtgtttgccc attatgttcg gctgcgggat aaccaaaatt
     3481 tatgagtgca taaaaacggt acgttcccga acggtcgaaa aggtggcaaa atggcgtact
     3541 tgtcagaacg cgaggctctg cgccaggttc acgagggtgc atcgggcacg ctaagatata
     3601 agagggtatg gatgggggta tcggaaatgc agttaataac aaacaaatta taaatcaata
     3661 ggttaataac aaaatgcttt tgtttatcga caattacgac agttttactt acaacatcgt
     3721 ccagtatttc gctgaattgg ggcaggaagt cgccgtgcgc cgcaacgatg atattacgtt
     3781 ggaagaaatc gaggcattga atccgcaata tctcgttatc ggacccggtc cgtgttcgcc
     3841 caaagaagcg gggatttccg tggcggcgat gcgccatttt gccggccggc tgccgattat
     3901 gggcgtgtgc ctcgggcatc agacgatagg cgaggcgttc ggcggcagga tagtccgcgc
     3961 caaaacgctg atgcacggta aggtgtcgcc cgtgtcccat tcgggcaagg gtatgtttaa
     4021 aggtttgccc aatccggtta cctgtacgcg ttatcacagc ctcgttatcg atcgggataa
     4081 tttgcccgat tgtttggaaa tcacggcttg gactgacgac ggcgagatta tgggcgtgcg
     4141 ccataaggaa tatgccgtcg agggcgtgca gttccacccc gaagccctct tgaccgaaca
     4201 cggacatgat atgttgaaca attttttaat cgaatttcaa aacttcaaac cgcaaaaaat
     4261 ctgacgcgat gccgtctgaa ggcttcagac ggcattttcg tccgaatatt gaacggagga
     4321 caaaaaatga ttacaccgca acaggctatc gaacgattaa tcagcaataa cgagttgttt
     4381 tacgatgaaa tgaccgactt gatgcgtcag attatgagag gacaggttct gccggagcag
     4441 atagcggcca ttttgacagg attgcgtatc aaggttgaaa ccgtttccga aattaccgca
     4501 gctgcagccg tcatgcgcga gtttgcgaca aaagtgccgc tggagaatgc agaggggctg
     4561 gtcgatatcg tcggtacggg cggggatggt gccaaaacct tcaatatttc gacgacctcg
     4621 atgtttgttg ccgcagcggc aggcgcgaag gttgccaaac acggcgggcg ttccgtttca
     4681 tcttccagcg gcgcggcgga cgtggtggag cagatgggcg caaacctcaa cctgactccc
     4741 gaacagattg ctcaaagtat cagccagacc ggtatagggt ttatgttcgc ccccaatcac
     4801 cacagtgcca tgcgccatgt cgccccggta cgccgttcgc tcggtttccg aagcattttc
     4861 aacatattgg gtccgttgac caatcctgcg ggcgcgccga accaactttt gggcgtgttc
     4921 cacaccgatt tgtgcggcat tttgtcgcgg gtcttgcaac aacttggttc aaaacacgtt
     4981 ttggtcgttt gcggggaggg cggcttggat gaaattacac tgacgggcaa aacgcgcgtt
     5041 gccgaactca aagacggaaa aatcagcgaa tacgacatcc gcccagaaga tttcggtatc
     5101 gaaacccgcc gcaatttgga tgaaatcaaa gttgccaata ctcaggaatc tttgttgaaa
     5161 atgaatgagg tgctggatgg gaaagaaggg gctgcgcgcg atatcgtatt gcttaatacc
     5221 gccgccgccc tatatgccgg aaatgtcgcc gcttcgcttt cagacggcat atctgccgca
     5281 cgggaagcca tcgattcagg tagggcaaaa tcgaaaaaag aggagtttgt cggttttcaa
     5341 ccacaacaaa gatgccattt tcttggaaag atggagcttg ggtgatgccg ccatgattat
     5401 ggaacttttg tggcaaaaca taagcacttc acgaagagaa cttaccaaac tgtttttata
     5461 taaaaacttg gggctgtact agataaccag accaaattcc cattaactaa ttgtcttaaa
     5521 atctgaattt gagattctat ttaaaatgcc attggcattt ctttaaatgc agccccaaat
     5581 gctctttggg aatgccgtta aacttacgta aatggctaaa ttcactaata tcaagcacat
     5641 cataactacg aaaggtatcc gtgtatacaa tgccatcagg cttaactttc tttcggataa
     5701 ttggcaacaa tgtcgctgat tgcgcattag gaacaacgac ggta
//
LOCUS       DAWKOX010000129         5691 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.129, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000129 DAWKOX010000000
VERSION     DAWKOX010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5691)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5691)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5691
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.129"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            285..1232
                     /locus_tag="WJK78_001581"
     CDS             285..1232
                     /locus_tag="WJK78_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ7598489.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMAYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(1385..2509)
                     /gene="rluD"
                     /locus_tag="WJK78_001582"
     CDS             complement(1385..2509)
                     /gene="rluD"
                     /locus_tag="WJK78_001582"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ7598490.1"
                     /translation="MQNTSFDNESDYSDDSDFVSASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVQQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAADPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPKTGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            2508..3311
                     /locus_tag="WJK78_001583"
     CDS             2508..3311
                     /locus_tag="WJK78_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ7598491.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(3369..5611)
                     /locus_tag="WJK78_001584"
                     /pseudo
     CDS             complement(3369..5611)
                     /locus_tag="WJK78_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
BASE COUNT         1371 a         1814 c         1369 g         1137 t
ORIGIN      
        1 tttctccgag ctttatatgt ttcaacagag gacggcacat caagcaccgc actgcgtgtt
       61 gcccgaacga gactaccctc cgattagatt ctatcgctat aaacagatgg gtttcaaccg
      121 aaaaggaatg gggataaagt ccatttccga cacctctcgg gcgatgccgt ctgaaaacca
      181 atctccactt tcagacggca ttgtttaggc acggtcattt tgcaaattaa ggttaaggcg
      241 tgtatgcttg ccttccctta aaaacaaaca cgcaacgcat tattatgaat atcctcagta
      301 aaatcagcag ctttatcgga aaaacatttt ccctctgggc cgcgctcttt gccgccgccg
      361 cttttttcgc gcccgacacc ttcaaatggg cggggcctta tattccttgg ctgttgggca
      421 ttattatgtt cggtatgggt ttgacgctca aaccttccga cttcgatatt ttgttcaaac
      481 atcccaaagc cgtcatcatc ggcgtaatcg cacaattcgc cattatgccg gcaaccgcct
      541 ggctgctgtc caaactgttg aacctgcctg ccgaaatcgc ggtcggcgtg attttggtcg
      601 gctgctgccc gggcggtacg gcttccaatg tgatggccta tctggcgcgc ggcaatgtgg
      661 ctttgtcggt tgccgttacg tctgtttcca ccctgatttc cccattgctg actcccgcca
      721 tcttcctgat gcttgccggt gaaatgctgg aaatccaagc ggccggtatg ttgatgtcca
      781 tcgtcaaaat ggttttgctc cccattgttt tgggtttgat tgtccataag gttttgggca
      841 gtaaaaccga aaagctgacc gatgcgctgc cgctggtttc cgttgccgcc atcgtgctga
      901 ttatcggcgc ggttgttggg gcaagcaaag gcaagattat ggaaagcggc ctgctgattt
      961 ttgcggttgt cgtactccac aacggcatcg gctacctgct cggcttcttt gccgccaaat
     1021 ggaccggcct gccttatgat gcacaaaaaa cgctggccat cgaagtcggt atgcaaaact
     1081 cgggcctggc cgccgcgctt gccgccgcac actttgccgc tgcgccggtc gttgccgttc
     1141 cgggcgcatt gttcagcgtg tggcacaata tctccggctc gctgctggca acttattggg
     1201 cggccaaagc cggtaaacat aaaaaaccct aaacgccttt catcataatg ccgtctgaac
     1261 ggggcaaacg aaaccggcgg tttccgcccg accccttcag acggcctttg tttgaaatcg
     1321 gcagggacga ttgtccggct gctccgattc ggctgcctgc gttcgccccg cctttcaagc
     1381 cgcctcactc ccttacataa accacttcga catcgtagtc gtcttcgttc caatcgtcat
     1441 cgtcgtccgc gccgaatttg tcctgccatt cctcttcatt gctcaaagac gaatccaaac
     1501 cggcttcaag acggaggaca gacaacaaat gatatatgtc gtccggaatc ggtgcttcaa
     1561 acgaaacggt ttcgccggtt ttcggatgag tgaaacttaa gcggtaggcg tgcaatgcct
     1621 gacgcgcacc caaactttta acggcttctt tcaccgtgtc gccgcacgga tggcgcgggt
     1681 tgccgtaaac cgggtcggcg gcaagcggat ggttggcctc acgcatatgg acgcggattt
     1741 ggtgcgtcct gcctgtttcg agcgagcatt cgatatagct gtgcgccaga tagcgttcca
     1801 acactttgac gtgggtaacg gctggtttgc cgccgaattt gacgactgcc attttcaggc
     1861 ggttgtgcgg atcgcgtccg atttgggttt cgattttacc gtcaaaggga acgatgccgt
     1921 tggcgacggc gcggtaaatg cgtttgaccg tgcgctcttg aagctgttgc acgagggaat
     1981 tttgcgccgg cagggttttg gcaaccacca tcagcccgct ggtttctttg tccaaacggt
     2041 gtacgatgcc tgcacgaggt acttggctca attcgggaca gtgcgccaac aggccgttga
     2101 gcagcgtccc cgtccagttg cccgccgccg gatgcaccac cagtccggcc ggtttgttga
     2161 cgacgatgac ggtatcgtct tcgtaaacga tatccaaagc cataggctct ggaacaaacg
     2221 ccagattttc ctcactcgga cggacggtta cacaaatttg ctcgccgcct atcattttgt
     2281 ctttgggttg cgaaggttta tcgtttacaa taaccgcgcc ttctttaatc catgatgtca
     2341 ggcggctgcg cgagtagtcg ggcagaagtt tcgccaacac cgcatccaac cgcccgccgg
     2401 caagctcgag cggaacggtc agaccgatac ggttttcagt ttcggaagct gacacaaagt
     2461 ctgaatcatc gctataatcg gattcattat caaaggaagt attctgcatg aaaaaaattc
     2521 ttttaacggt ttcattaggt ttggcactga gtgcctgtgc cactcaaggt acggtcgata
     2581 aagatgctca gattacccaa gattggagtg tggagaaact ctatgccgaa gcccaggacg
     2641 aattgaacag cagcaattat acgcgggctg tcaagttata cgaaatcttg gaatcgcgct
     2701 tccccaccag ccgccatgcc cggcagtcgc aactggatac cgcatacgcc tattataaag
     2761 acgatgaaaa agacaaagct ctggcggcaa tcgaacgctt ccgccgcctt cacccgcaac
     2821 acccgaatat ggattacgcg ctgtatctgc gcggcttggt gctgttcaac gaagaccagt
     2881 ccttcttgaa caaactggcc tcgcaagact ggtccgaccg cgacccgaaa gccaaccgcg
     2941 aagcgtacca ggcgtttgcg gaactcgtcc aacgcttccc caacagcaaa tacgccgccg
     3001 atgcgaccgc acgcatggtc aaactggtcg atgcactggg cggcaatgaa atgtcggtgg
     3061 cgcgctacta catgaaacgc ggtgcataca tcgccgccgc caaccgcgcc caaaaaatca
     3121 tcggcagcta ccagaatacg cgttatgtcg aagaatcgct cgccatattg gaacttgcct
     3181 accaaaaact cggcaaacca cagcttgccg ccgatacgcg ccgcgtgttg gaaaccaact
     3241 tcccgaaaag cccgtttttg acgcacgctt ggcagcccga cgatatgccc tggtggcgtt
     3301 actggcatta agcccatctt cgtaatgccg tctgaagccg tttcagacgg cattttatgt
     3361 ttcaaacctc attcaaacgg ttttttctgc caatagaatt tataccctct caaacgttga
     3421 gccttcacgc cgccgcgccc caagccgaat tgcagcgcgc ctgacaaatc ggtacgcagc
     3481 agtttgatgc cgtgtgcgcg gacacggttc tgcaccgctt cggtcggatg tttgtaggcg
     3541 ttggcataac cgcttgaagc aacagcatat tcgggcgaga cggcattgag gaacacgccc
     3601 gacgaggacg tattgctgcc gtgatgtccc aacaccaaaa cctggctgta caggttgcct
     3661 ccatacttgc cgaccaggct ttcctcgccc ttcgtatcca aatcgcccgt taccagcagt
     3721 gccgcaccgc ccgccacaac acgcaaaaca caacttttcc cattatcatc gatgtttttg
     3781 cgttcagacg gcatcaaaaa ctcaaaatcc acgccgtccc attgccaacg ctgttccgca
     3841 caatgccgcg ccccctcata aaattccggc tgcccggcat aaatcccgcc gttcggtatc
     3901 ttgccgactg cctgaaaacc gccgtcgtgg tcgctgtcgt gatgcgacag aaccagcttg
     3961 tccaaacggc ggacacccgc cgcattcaaa ctcggcacaa tccccatctg cgccgccgct
     4021 gccgttccgg tgtcaaacaa aagatgatga tttgccgtct gaaccgacac cgacaaaccc
     4081 tgccccgcat cccaaaccgt aaccgcaacc tcattttccg gcacgccggg tgaacggtaa
     4141 aacacaaacc ctgccaacag caacaccgcc cacggacgca aacccaagcc gcgcggcagc
     4201 agcaacagca aagcggcaca caccgccaac accaacagcg gcaaaggtgc ggaggcaacg
     4261 gcaaactcgg gcgacacatc ggcaagccac accaaaaacc gcaaagtata ttccgccaaa
     4321 aatgccccca actgttgcaa aggcgcaaac ggcacgaccg aacccagcaa cgccagcggc
     4381 gtcaataccc aagaaaacca cggaatcgcc accgcattga ccaaagggct gattaaaggc
     4441 agcgaagcaa acagataacc gagcaaaacc aacgacaaca ccgaagccgc ccactgcccg
     4501 cgcaaagcag tttgccgttt cccctcgtgc aaacgccccg aacacgccca tatcagggcc
     4561 gccaccaaac caaaagacag ccaagtcccc acacccaaga ccgccaagtc cccacaccca
     4621 agaccgccaa agggtcgaac agcagcaccg ccgccaacgc ctgccaccac gttgcccacg
     4681 ccgacagtct tcccctgcgc caagcccacg caaacgccgc caacatcaaa acgctgcgct
     4741 gcgtcggcac ggaaaaaccg gcaagcagcg cgtaaaacag cgcgcctgca caccccgccg
     4801 ccaaaaccca cacgcgcggc cgggcaggaa ggcgcgggga acaggcaagc agccgcttcg
     4861 ccagccacgc aaacaacacc gccaccatcg taacgtgcaa acccgaaata ctgaccaaat
     4921 gcgtcagccc caacggccgg aacgcctgcc acaattcggg gcgcaatgcc gactgttcgc
     4981 ccacgctcaa cgcgcgcatc agcccgatgc cgtctgaaag cccgccgtcc gcatccgcct
     5041 gctgccaatt acggctgatg cggctgcgcc aaaccgcaat cccccaaccg cttccgccat
     5101 gcagcaaaac cctgtccgca ccgaccgtcc ccgcgccgcc tattccgttg gataatgccc
     5161 acgcctcacg gttcaaaccg cgcaggttca actccccgac gacagggtgc acacgtgccg
     5221 ttatccgcca tctgctcccg accgcccatt cgcgccgttt gtagtccgac agcagcaaat
     5281 caaacgtccg accaccgctg tccacagcct ttgccgcaaa ctgcacacgc cgcccgtccg
     5341 acctcggcat atccgccact tccaccgtca aaggcacgcc tgaaacggct tctgcccgcc
     5401 attgcgaaga cagtgccgct tccgttctga atacgccgta agccgccccc accaacacgc
     5461 acagcatcag accggcaaac gcaaaacgcc ttgcaaacac agcaaaaacc gcaaaagccg
     5521 ccagccaaaa cagccaatgc ggcacgaccg gcagcgcaaa cgaagccgcc gcaccgacaa
     5581 cccaacacgg caaaaaccaa cgacggaaca cgtctcccca ccccagatat ttcaaaaata
     5641 aacggataat aaagcaaatc cgaaaaaccg tcataacaag atttgaaaat g
//
LOCUS       DAWKOX010000130         5689 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.130, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000130 DAWKOX010000000
VERSION     DAWKOX010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5689)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5689)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5689
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.130"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            33..2432
                     /gene="mafB"
                     /locus_tag="WJK78_001585"
     CDS             33..2432
                     /gene="mafB"
                     /locus_tag="WJK78_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HEZ7598492.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNTGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPIKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLANKRHPKTKVPFDGKGFPNFEKDVKYDTRINTAVPQVNPIDEPVF
                     NPKGSVGSAHSWSITARIQYAKLPRQGRIRYIPPKNYSPSAPLPKGPNNGYSAGNLSK
                     KVLTLVYINGKLKFGPSSLPSSALKAPVPIVGKAEAPPGKAVPVGEARIPSNPKAVKG
                     TTVTLSQEQRLANGELIPKGSVVTWSDNAVKVVRPDGKKRRFNSRDWEQKALPKPQLP
                     KDYRDDINIGGNNPRFNQQRHEKIESHNPNRIEEIRQRNAVSSAERQADALKRMQTSG
                     RTRLPGQPQKGKPGAAREMSSSDNPNQTAEAFARRYLGRKPTLMERVEGEKLYGGKCV
                     GCWKAQMPDGTFVVYRPAGNASMTKGTTASVDINNPTLNNLNINLKGKPTELKFKFPA
                     R"
     gene            2443..2904
                     /locus_tag="WJK78_001586"
     CDS             2443..2904
                     /locus_tag="WJK78_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598493.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            2930..3178
                     /locus_tag="WJK78_001587"
     CDS             2930..3178
                     /locus_tag="WJK78_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ7598494.1"
                     /translation="MEIKKPDGSWEMKKGRGGKPMTNHSMFPKDWDEARIRAEVTSAW
                     EKRKELEGQKWRGTSKSGVEIEGFTEPNRTAYPLYNSK"
     gene            3205..3624
                     /locus_tag="WJK78_001588"
     CDS             3205..3624
                     /locus_tag="WJK78_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598495.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            3702..3785
                     /locus_tag="WJK78_001589"
                     /pseudo
     CDS             3702..3785
                     /locus_tag="WJK78_001589"
                     /inference="COORDINATES: protein motif:HMM:NF026862.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3782..4024
                     /locus_tag="WJK78_001590"
     CDS             3782..4024
                     /locus_tag="WJK78_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
                     /protein_id="HEZ7598496.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            4102..4347
                     /locus_tag="WJK78_001591"
     CDS             4102..4347
                     /locus_tag="WJK78_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ7598497.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            4350..4740
                     /locus_tag="WJK78_001592"
                     /pseudo
     CDS             4350..4740
                     /locus_tag="WJK78_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4767..4958
                     /locus_tag="WJK78_001593"
     CDS             4767..4958
                     /locus_tag="WJK78_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ7598498.1"
                     /translation="MRLSDGIFDTKQVTKRVFDGKGEAKIPSYTWHHHQDTGRMQLIS
                     ERKHTQTGHIGGEAMDKGK"
     gene            4961..5359
                     /locus_tag="WJK78_001594"
     CDS             4961..5359
                     /locus_tag="WJK78_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598499.1"
                     /translation="MLGLTRNNCDDLGFAILCYERNAADKKEFLDWLYGIVRTVPAES
                     FPRYLIDLIDCLESDDCSINIYNIIGFVPTTGMTKKEKDAVYGITYIRNQEFYDIPIT
                     REKALKALKKHPEIYQKFRHFFPFVELPPL"
     gene            5460..>5689
                     /locus_tag="WJK78_001595"
     CDS             5460..>5689
                     /locus_tag="WJK78_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598500.1"
                     /translation="MWKIIKEDSNDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDVGIGDIGNIVGFAPSSSLPKS"
BASE COUNT         1867 a         1072 c         1263 g         1487 t
ORIGIN      
        1 tttcattccg taccatctta aggaacatca aattgggcat ttcccgcaaa atatccctta
       61 ttctgtccat actggcagtg tgcctgccga tgcatgcaca cgcctcagat ttggcaaacg
      121 attcttttat ccggcaggtt ctcgaccgtc agcatttcga acccgacggg aaataccacc
      181 tattcggcag caggggggaa cttgccgagc gcagcggtca tatcggattg ggaaacatac
      241 aaagccatca gttgggcaac ctgatgattc aacaggcggc cattaaagga aatatcggct
      301 acattgtccg cttttccgat cacgggcacg aagtccattc ccccttcgac aaccatgcct
      361 cacattccga ttctgatgaa gccggtagtc ccgttgacgg attcagcctt taccgcatcc
      421 attgggacgg atacgaacac catcccgccg acggctatga cgggccacag ggcggcggct
      481 atcccgctcc caaaggcgcg agggatatat acagctacga cataaaaggc gttgcccaaa
      541 atatccgcct caacctgacc gacaaccgca gcaccggaca acggcttgcc gaccgtttcc
      601 acaataccgg tagtatgctg acgcaaggag taggcgacgg attcaaacgc gccacccgat
      661 acagccccga gctggacaga tcgggcaatg ccgccgaagc tttcaacggc actgcagata
      721 tcgtcaaaaa catcatcggc gcggcaggag aaattgtcgg cgcaggcgat gccgtgcagg
      781 gtataagcga aggctcaaac attgctgtta tgcacggctt gggtctgctt tccaccgaaa
      841 acaagatggc gcgcatcaac gatttggcag atatggcgca actcaaagac tatgccgcag
      901 cagccatccg cgattgggca gtccaaaacc ccaatgccgc acaaggcata gaagccgtca
      961 gcaatatctt tacggcagtc atccccgtca aagggattgg agctgttcgg ggaaaatacg
     1021 gcttgggcgg catcacggca catcctatca agcggtcgca gatgggcgcg atcgcattgc
     1081 cgaaagggaa atccgccgtc agcgacaatt ttgccgatgc ggcatacgcc aaatacccgt
     1141 ccccttacca ttcccgaaat atccgttcaa acttggagca gcgttacggc aaagaaaaca
     1201 tcacctcctc aaccgtgccg ccgtcaaacg gaaagaatgt gaaactggca aacaaacgcc
     1261 acccgaagac caaagtgccg tttgacggta aagggtttcc gaattttgaa aaagacgtaa
     1321 aatacgatac gagaattaat accgctgtac cacaagtgaa tcctatagat gaacccgtct
     1381 ttaatcctaa aggttctgtc ggatcggctc attcttggtc tataactgcc agaattcaat
     1441 acgcaaaatt accaaggcaa ggtagaatca gatatatccc acctaaaaat tactctcctt
     1501 cagcaccgct accaaaagga cctaataatg gatatagtgc cgggaattta agcaaaaaag
     1561 tcctgacttt agtttacata aacggcaaac tcaaattcgg gccaagcagt ctgccgtctt
     1621 cggcattgaa agcacctgtt cccattgtcg gcaaggctga ggctccgccc ggaaaagctg
     1681 tgcctgtcgg cgaagcccgc attccttcaa atccaaaagc ggtaaaagga acaaccgtta
     1741 ccctgtcgca ggaacaacgc ctagccaacg gagagctgat accgaaaggc tctgtggtaa
     1801 cgtggtcgga caatgcggtg aaggttgtgc ggcctgatgg gaaaaagcgg agatttaata
     1861 gtcgggattg ggaacagaag gcattgccga aaccgcaact accgaaagat tacagagatg
     1921 acatcaacat aggtggaaat aatcctagat ttaatcagca acggcatgaa aaaatcgaat
     1981 cccacaaccc aaacagaata gaggagatac gccaacgtaa tgccgtttct tctgcagaaa
     2041 ggcaggctga tgcattaaaa aggatgcaaa cgtctggccg cacccgcctg cctgggcagc
     2101 cacaaaaagg aaaacccggc gctgctagag aaatgtcctc ttcagacaat ccgaatcaaa
     2161 cagccgaggc ttttgcacgt cgatatttag gcaggaaacc tacactaatg gaacgagtcg
     2221 aaggtgaaaa attatacgga ggtaaatgtg tgggctgttg gaaagcgcaa atgccggacg
     2281 gaacctttgt ggtgtatagg ccagcaggta atgcttctat gaccaaggga actactgcgt
     2341 ctgttgatat taataaccca acattaaata acttaaatat taatttaaaa ggcaagccaa
     2401 cagagttaaa atttaaattc cctgctagat aaggatgttt taatgaattt agagacagca
     2461 gaaaatattc aatgcgaatt tgagtattta gcattagatg gttattttcc aatgcatttt
     2521 gcatcgcatg gtcaaggaaa caaagattgg caatttgcag ttgaattcat atatagatta
     2581 ttaatatgtc aattagcaac tcttgaacct atcaactttg aaacgaaaaa tgatatttta
     2641 gacttttgcc ataatttagc aaaacaaagt ccttttaata atgataatga ggtgtggtat
     2701 cagggggaaa ttgtattaac aaaaaaaggg atagatttaa taaaggaata tattccagag
     2761 gcgtttgaag agtggaatgg aaagaaattt gaattaaaca ttcctttcat taaaacatta
     2821 aaaaatatat ttgttaatta tgaggtagca tgggatgaga ataatccact attccccatt
     2881 atatctttaa acctcggcac ctgataaaca tggggtttat caagcgacag tggaaattaa
     2941 aaagcctgat ggaagttggg aaatgaaaaa aggaaggggc ggaaaaccta tgacaaatca
     3001 ttctatgttc ccaaaagatt gggatgaggc tagaattagg gctgaagtta cttcggcttg
     3061 ggagaaaaga aaggaattag aaggtcaaaa atggagaggt acaagtaaat ctggtgttga
     3121 aatagaagga tttacggaac ctaatcgaac agcttatcca ctttataata gtaaatgaag
     3181 tattgattaa aaaggtgttt ttaaatgtat aaaataaaat gtttttatga tcagtttagt
     3241 tctggtgaat tatttaacta ctgccagttt ttagataatt cttctaatca aaagataaat
     3301 acacgaggaa cggtgtatca atatattatt tatgttttaa caggagacct ttatctacaa
     3361 aaagacatag atgaaaattt agaatttatc catcaagcag aaaataatcc caatgaagtt
     3421 tattcaggag gtggacaagg tttttgctgg gatatttctg ctgaaaaagt agttttctat
     3481 cacaacgaat ttgatgaaga agacggctgg cctgatttaa gctgttcgct gcatactttt
     3541 aaaactgctt taattgcttg gaatgctttt ttgcaattgc ctaaaagtat tcattcggtg
     3601 gtggagactg tgattgagga ataagcataa ttagcttaat gaatagaatc agcgatatag
     3661 attggactgc aaatccacgc ttatacgctg tgccatgatt aacaggaaga gagcaacttg
     3721 gatgggctag tagggatggt aagcatttaa atatatcaat tgatggaaag attacacaca
     3781 aatgactaat ttaaaattag atttctactc tgaagttatt ataaaagatt cttgccctaa
     3841 tgatttgtta gaaaatggtg agactattaa aggaaaaaaa ggagtggtat taggtataag
     3901 cgaagaagat ggtataatct atggctatac tattttactt tttgatataa aatattgtat
     3961 atatatagat aagaaatata ttataccgac tggaaaaaaa ttctctcgcg atgattttta
     4021 ttagctaatt taagtaattt aagcaagttt tttagatact gaaactggta attatgttta
     4081 tgtaagcata aggagttcag attgaaggat tctacagggc aaatgaggct ggcaaccaag
     4141 gatttggcgg aagccattaa acgaggagaa gtacgtagtt ctgcttttac aacaaagcaa
     4201 ctaaaggcaa tcgaaaaagg agaatctaaa ataccggatt acacttggca tcatcatcaa
     4261 gacactggaa ggatgcaatt gattaatgaa gacttgcatc atgataccgg ccatatcggt
     4321 tggagagcga tgagtaaagg aaagtaacta tgtggaaaat cataaaagag gatagtgatg
     4381 atttaggatt tgcaattaaa tgcttattct ctcaatctat tgatttaaat gaattcaaat
     4441 tatggattga acaagtaata cgagatatgc ccatcgagga catccctttt tatatttttg
     4501 acttggcgga tttcgatggg gtaattgccg atattgacaa tattgtaggt tttgtttcga
     4561 gttacagcct atcaaaatcg aaaaaaaaat gccttgaccg gcattgcctt cttaaggggg
     4621 atagatgtct atgaccctcc cgtttcaaaa gaaaaagcat taaaagcctt agagaaatat
     4681 cctgaaattt atcagaaatt tcagcatttc tttccgtttg tagagctgcc tccgctttaa
     4741 acagtcaaaa tgccgtctga aacaatattc ggctttcaga cggcattttt gatacaaagc
     4801 aggtaaccaa aagagtgttt gacggaaaag gagaagctaa aataccgagc tatacttggc
     4861 atcatcatca ggatacggga cgaatgcagt taatatccga aagaaagcat acgcaaacag
     4921 ggcatatagg tggtgaagca atggataaag gaaaatgatt atgttggggc ttacacggaa
     4981 caattgtgat gatttgggat ttgctatatt gtgttatgag cgcaatgcag ccgacaaaaa
     5041 agaattcttg gattggttat atggaattgt caggactgtc cctgccgaaa gttttccaag
     5101 gtatctgatt gatttaatag attgtttgga atcagatgat tgttccataa atatatataa
     5161 tattattggc tttgttccaa ctaccggtat gacgaaaaag gaaaaagatg ccgtatatgg
     5221 cattacctat atacggaatc aagagtttta cgatattccg attactaggg agaaggcgtt
     5281 aaaagcctta aaaaaacatc ctgaaattta tcagaagttt cggcatttct ttccgtttgt
     5341 agaactgccc ccgctttaaa cagtcaaaat gccgtctgaa acgatattcg gctttcagac
     5401 ggtatttttg atataaagcg ggtaactaaa agagcgtttg acggcaaagg aagataatta
     5461 tgtggaaaat tataaaagag gatagtaatg atttaggatt cgcaattaaa tgcttattct
     5521 ctcaatctat tgatttaaat gaattcaagt tatggattga acaagtaata cgagatatgc
     5581 ccattgagga catccctttt tatatttttg atttggcgga tttcgatgta ggaattggcg
     5641 atattggcaa tattgtaggt tttgctccga gttccagcct gccgaaatc
//
LOCUS       DAWKOX010000131         5659 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.131, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000131 DAWKOX010000000
VERSION     DAWKOX010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5659
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.131"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            99..815
                     /locus_tag="WJK78_001596"
     CDS             99..815
                     /locus_tag="WJK78_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ7598501.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            964..1866
                     /locus_tag="WJK78_001597"
     CDS             964..1866
                     /locus_tag="WJK78_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ7598502.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1909..2682
                     /locus_tag="WJK78_001598"
     CDS             1909..2682
                     /locus_tag="WJK78_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ7598503.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEGGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2794..4482
                     /locus_tag="WJK78_001599"
     CDS             2794..4482
                     /locus_tag="WJK78_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ7598504.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSVEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFEAGKTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4575..5531
                     /gene="gshB"
                     /locus_tag="WJK78_001600"
     CDS             4575..5531
                     /gene="gshB"
                     /locus_tag="WJK78_001600"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ7598505.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALEAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1304 a         1554 c         1569 g         1232 t
ORIGIN      
        1 aaatttgtgt aatactttga tttccccgac acgatttgaa gcacagccgc cttaaaacat
       61 cttaaaaaat ttgaaagcgt aaaaatacgg aaaacatcat gaactttgaa aacgacgaca
      121 ttatccatgc gccgaccacg tcttccctga ttctcgaaga gcggcacgat tcggagctgt
      181 tccgtgttta cgccctgatt ttggacggca ttaccgatca ggtgctgctg cccggcaaaa
      241 agctgaccga atccgaactt tgccgtcaga tggtgtgttc gcgcaacacc gtccgcggcg
      301 cgctgtcgct tttggcgcac gacaagattg tcgatttgca acccaacagg ggcgcgttcg
      361 tccacgttcc cgatttgaaa gaaatgcagg atgtgttcaa tgcgcgcatc gaaatggaga
      421 cgatgatttt gaatatcctc gcagatttgc cggatttgga aacgcgcctc aagccgcttt
      481 atgcgatgat acggcgcgaa gaagaggcct ccggcagggg cgaccgcgtt ggctggaacc
      541 gcctgtccaa tgccttccac gtcgaactgg cgcgcctggt gggcaacgat gtgctgttcg
      601 acattatgaa cacgctgtgc gcgcggtctt ccctgattgt cgccgtggcg ggcgtgcatc
      661 gcgaggaaaa acacgccatc aatacgcata cgcattcaga acaccgcgaa atcctcgacc
      721 tgctgctggc gggcaggcgc aaccgcgtgg tcaaaatcct gcgccgccat ttgggcaact
      781 gtatggagcg tttggaaaag actttggaag attgaatgcc ggagcggata agccgcctga
      841 accttcaggc ggttttttaa tggcgaacct gatgccgtct gaaatatgga tgcgggtatc
      901 tgcaattttc agacggcaat ttttaaaccg cacatatcat gcggcaataa aggagagcag
      961 tagatggaca gcctgatgac attgctttcg gtattgatac cgatgtttgc cggatttttt
     1021 atccgtgtgc ccaagcctta cctgcccgct ttggataagg tgctatcggt cttggtgtat
     1081 gctgtgctgc tgctgatcgg cgtctcgttg tcgcgcgtgg aggatttggg ttcgcggttg
     1141 gacgatatgg cgttgacggt tctgtggctg tttgtttgta cggtcggggc gaacctgctt
     1201 gctttggcag tgttgggaaa gttattcccg tggcggataa aggggaaagg gaagggcgtt
     1261 tcggtcggcg tgtcgggcag tgtggggcag ctcggatgcg tgctgctcgg atttgcattc
     1321 ggcaaactga tgcgcgatat ttggatgccg tctgaaagcg cgggcatgta ttgtctgatg
     1381 ctgctggtgt tcctcatcgg cgtacagctc aaaagcagcg gcgtatcgtt gcggcaggtt
     1441 ttggtcaacc gcaggggtat tcggttgtcg gtctggttta tgctttcatc tctttcgggc
     1501 gggctgctgt ttgccgcatc gacagacggt gtgtcgtgga cgaaaggttt ggcgatggct
     1561 tccggcttcg gttggtattc cctctcgggt ttggtcatga ccgaggctta cggcgcggta
     1621 tggggcagca tcatgctgct gaacgatttg gcacgagagc tgtttgcact ggcatttatc
     1681 ccgctgctga tgaagcgttt tccggatgcg gcggtggggg ttggtggtgc gaccagtatg
     1741 gatttcacat tgcccgtgat tcagggtgcg ggcggtttgg aagtcgtgcc ggtagcggtc
     1801 agcttcggcg tggtggtcaa tatcgccgcc ccatttctga tggtggtgtt ttccgctttg
     1861 ggttgaacgc ggtaaaatcg gcatcccgat gcaaggaggc agaaaacgat gaaaccgaaa
     1921 atccaaaggc acggagagat tttaagcctt gtccgccggc atcagtttat gtcggtggac
     1981 gagcttgccg ccgcattgga cgttaccccg cagacgatac gccgcgacat ccgcgagttg
     2041 gaggagggcg gcagcctgaa acgccatcac ggcggcgcat cttcgggcgg aaacttgccg
     2101 gagggcctgc ccgccgaccg ccaaacccgg tgtcaaaacg aaaaaaacgc cattgcccgg
     2161 ctgattgcgg aacacatccc cgacggttcg tcgctgtttg tcagtatcgg cacgacgatg
     2221 gaagccgtgg catcggagct ggtcaggcgg cgcggcagcc tgcggattat taccaacaat
     2281 atccacgtcg cctccatcgt ttcggcgcgg acggattaca cggtcattat cacttccgga
     2341 gtcgtccgcc ctttggacgg cggtattacc ggcgtggcaa ccgtcgattt tatcaaccag
     2401 ttcaaagtcg attatgccgt gatgagtacg cacggcgtgg aaagcgacgg ttcgcttttg
     2461 gacgacgact acaaagaagt cagcgtgatg caggcgatga ttgccaatgc gcgcgtccgc
     2521 ttcctcggcg tggaccacag taaattccgc agcaacgcgc tggtcaggct cggcgacatt
     2581 acggcgtttg acaaagtatt taccgaccgg ctgcccgata ccgcgatgca gaagatgctg
     2641 aaagaggcgg gggtggaatg cctgattgcc gatgccgtct gaacgctatg tcaaagcgcg
     2701 caagtcgggt acaataaaca catcatcaaa ccgcttcaga cggcataagg aaccgcccca
     2761 atgccgtctg aagccatctg ttcaaagaaa actatgctca ataaagacca atttgcggac
     2821 aaccatttta tccgcacctt catcgaagaa gacctcaaaa gcggcaaaca cgaagccgtc
     2881 caaacccgtt tcccgcccga acccaacggc tacctgcaca tcggacacgc caaatccatc
     2941 tgcctgaact tcggtttggc gtatatttac gacggcttgt gcaacctgcg ttttgacgat
     3001 accaaccccg aaaaagaaaa cgacgaatac gtcaacgcca tcaaagaaga tgtcgagtgg
     3061 ctcggtttcc attgggcggg cgagccgcgt ttcgcttcca actatttcga ccagctttat
     3121 gactacgccg tcggtttgat taaagacggc aaagcgtatg tcgatgattt gacgcccgaa
     3181 gaaatgcgcg aataccgcgg tacgctgacc gaagcgggta aaaacagccc ttaccgcgac
     3241 cgcagcgtcg aagaaaacct cgacctgttc acacgcatga aaaacggcga gttccccgac
     3301 ggcagcaaaa ccctgcgcct gaaaatcgac atggcatcgg gcaacatcaa tatgcgcgac
     3361 cccgtcatct accgcatccg ccgcgcccat caccacaaca ccggcgacaa atggtgtatc
     3421 tacccgatgt acgactacac gcattgcatt tccgatgcca tcgaaggcat cacgcattcc
     3481 ttgtgtacgc ttgagtttga agcgcaccgt ccgctgtacg actgggtgtt ggataacatc
     3541 cccgcgccgc acgccacacg tccgcgccaa tacgagtttt cccgtttgga gcttttgtac
     3601 accattacct ccaaacggaa attgaatcag ttggttgtgg aaaaacacgt ttccggctgg
     3661 gacgatccgc gtatgccgac catttccggt atgcgccgtc gcggctacac gcccgaaggc
     3721 ctgcgcctgt ttgccaaacg cgccggtatt tccaaatctg aaaacatcgt cgatatgagc
     3781 gtgttggagg gtgcgattcg cgaagagctg gaaaactccg ccccgcgcct gatggcggtg
     3841 ttgaacccgc tcaaagtaac cctgaccaac tttgaagccg gcaaaaccca aagccgccgt
     3901 gccgcgttcc atccgaacca cgaagaaatg ggcgatcgcg aagtacctgt ttcacaaacc
     3961 atttacatcg aagccgacga ctttgccgaa aatccgccca aaggcttcaa acgcctgatt
     4021 cccggcggcg aagtacgctt gcgccacggc tatgtcatca agtgcgatga agtcgtcaaa
     4081 gacgaagcag gcaatgtggt tgaactcaaa tgcagcatcg accacgacac cttgggcaaa
     4141 aatccagaag gccgtaaagt taaaggcgtg attcattggg tttccgccga acacgccgcc
     4201 gaaatcaaag tccgtctgta cgaccgcctc tttaccgtcg agcgtcccga tgccgtgcgc
     4261 ggcgaagacg gcgaatacct gccgttcacc gatttcctca atccggaatc cgtcaaggaa
     4321 atcaccgcct acgccgaacc tgccgccaaa gatttgccgg cagaaagccg ttggcagttc
     4381 gagcgtatcg gctacttcgt aaccgaccgt aaagaccacg gcaaagacac gccggtgttt
     4441 aaccgcacgg tcacgctgaa agattcttgg cagcctaagt aaaaccccat ccttgccgtc
     4501 tgaatattgt tcggacggca tttccccttt gcccgcgaaa tgcggcacat tcggcacacc
     4561 ggaaaggaaa tatgatgaaa gtcctcttta tcgccgaccc gatggcaagt ttcaaaacct
     4621 acaaagacac cacctacgcc atgatgcgcg agatggcaaa acgcggttgg cggctgtttc
     4681 ataccttgag cggggaattg tcggttaaaa acggtctggt ggttgctgat gcgtctgctt
     4741 ttgagtttct cggcgcacaa gacgaccacg acaaaaactg gtttgccgcc gccgacaaag
     4801 ttcagacggc attggaagca tttgatgccg tgattatgcg taccgatccg ccgttcgata
     4861 tgcaatacct ctacgccacc caattactga cgctggcgga acagcagggc gcgaaggtct
     4921 ttaacagcgg acaggcgatg cgcgacttta atgaaaaact ggcgattttg aacttcagcc
     4981 gctttaccgc gcccacgctg gtaacgaccc gttccgccga tgtccgcgca tttttgaaag
     5041 aacacggcga catcatcatt aaaccgctcg acggcatggg cggtatgggc atcttccgcc
     5101 tgaccgaaaa agaccccaac atcggcagca tcctcgaaac cctgatgcag cttgattccc
     5161 gcaccattat ggcgcaacgc tacattcccg aaatcgtaca cggtgacaaa cgcatcctga
     5221 ttatcggcgg cgaagtcgtc ccctatgctt tggcgcgtat cccgcaaaac ggcgaaacac
     5281 gcggcaacct tgcggcaggc gggcgcggcg tggcgcagga attgggcgga cgcgaccgcg
     5341 aaattgccga aacgctcgcc cccgaactca aacggcgcgg catcctgctg gccggtttgg
     5401 acgttatcgg cagcaacctg accgaagtca acgtaaccag cccgaccgga ttccaagaaa
     5461 ttatgaaaca aaaaggcttc gatgtggcgg caatgtttgc cgatgccgtt gccgcgtggt
     5521 cggtacgtta aaccgatgcc gtctgaaagg cttttgcttc acaaccgcct ggtttgatcg
     5581 ggcaggcagg gttttccctc agtcggcaga gatacgctta ataccgtacg gacaccccgc
     5641 cgccccgttt tcagacggc
//
LOCUS       DAWKOX010000132         5622 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.132, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000132 DAWKOX010000000
VERSION     DAWKOX010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5622
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.132"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1482..1727)
                     /locus_tag="WJK78_001601"
     CDS             complement(1482..1727)
                     /locus_tag="WJK78_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598506.1"
                     /translation="MLKSIELNSHVRNRLAAYLKGRGMDFQTAMQEEEGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            1844..2269
                     /locus_tag="WJK78_001602"
     CDS             1844..2269
                     /locus_tag="WJK78_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ7598507.1"
                     /translation="MYSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYVR
                     LSDMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLILLAYQLYCGVL
                     LRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            2281..2757
                     /locus_tag="WJK78_001603"
     CDS             2281..2757
                     /locus_tag="WJK78_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ7598508.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GQRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGENAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(3107..3595)
                     /locus_tag="WJK78_001604"
     CDS             complement(3107..3595)
                     /locus_tag="WJK78_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ7598509.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPEIDRTHWKEAGRTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(3663..4718)
                     /gene="aroG"
                     /locus_tag="WJK78_001605"
     CDS             complement(3663..4718)
                     /gene="aroG"
                     /locus_tag="WJK78_001605"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ7598510.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            5070..5275
                     /locus_tag="WJK78_001606"
                     /pseudo
     CDS             5070..5275
                     /locus_tag="WJK78_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697603.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5364..>5622
                     /locus_tag="WJK78_001607"
     CDS             5364..>5622
                     /locus_tag="WJK78_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598511.1"
                     /translation="MRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVGKQLTDSVGLE
                     FDPYYRHKTICKPREIVLDGDKTKMGRSKSNEYGFRVAATFY"
BASE COUNT         1410 a         1391 c         1332 g         1489 t
ORIGIN      
        1 cagtgtcatg agaaattttc ctttgtcaag tgttaaaatt ataatgatta tatactacat
       61 tatactacat cgcaatgaaa aatcaggaaa agcaaaaaac cctccgccgt cattcccgcg
      121 aaagcgggaa tctagaattt taatgccgca agaatttatc aaggatggtc ggggtttaaa
      181 ggtctggatt cccgcctgcg cgggaatgac ggtttagaaa tcacccgaaa caagaaaaag
      241 aaccgaaacc gaacaagccg gattcccgcc tgcgcgggaa tgacgggatt tcaggttact
      301 gtttttgatt ttctgttttt gtgggaataa cgggactttg gatgatgtgc atttatcgag
      361 aaaactaaaa accctccgcc gtcattcccg cgaaagcggg aatctagacc tttcggtgcg
      421 gaaacttatc ggataaaacg gttttccctg catcctggat tcccactttc gtgcgaatga
      481 cgggatatag gtttcactac ggacgtgttc agattaccgc ctgcgcggga aagacgggat
      541 ttcaggttgc tgtttttgat tttctgtttt tgtgggaata acgggacttt ggatgatgtg
      601 catttatcgg gaaaacaaaa aaccctccgc cgtcattccc gcgaaagcgg gaatctagaa
      661 ttttaatgct gcaagaattt atcggggatg accgaggttt gaaggtctgg attcccgcct
      721 gcgcgggaat gacggtttag aaatcacctg aaacgagaaa aagaaccgaa accggacaag
      781 tcggattccc gcacgggcgg gaaggacgga atttcagatt gttgtttttg attttctgtt
      841 ttgtgggaat aacgggattt tggatgatgt gcatttatcg ggaaaactaa aaaccctccg
      901 ccgtcattcc cgtgaaagcg ggaatctaga atttcaatgc cgcaagaatt tatcggggat
      961 gtccggggtt taaaggtctg gattcccgcc tgcacgggaa tgacggttta gaaatcacct
     1021 gaaacgagaa aaagaaccga aaccagataa gtcggattcc cgcacgggag ggaaggacgg
     1081 gatttcaggt tactgttttt gattttctgt tttgtgggaa taacgggatt ttggatgatg
     1141 tgcattttcg ggaaaactaa aaaccctccg ccgtcattcc cgcgaaagcg ggaatctaga
     1201 attttaatgc ggcaaaaatt tatcggaaaa aaccgaagtt taaagaccta gattcccgcc
     1261 tgcgcgggaa tgacggttta gaaatcaccc gaaacgagaa aaagaaccga aaccgaacaa
     1321 gccggattac cgcctgcgcg ggaatgacgg ctcaaaagtt acgaaacgaa aaataaccga
     1381 aaccagacaa gtcggattcc cgcgcgggcg ggaatgacga taagcgtaat ttcaatctgc
     1441 catattgtct tttcacttgc ctgaaaacag atttcagccg cctatccctg catccggcgg
     1501 ctgatgtagt cggcaatcaa atcccgcttt tcccaaaaaa atttctgcat tttttgttcg
     1561 gaatacagtt tgcggaccag agtgggcaga ccgctgtgga cgatggcggc gatttctttg
     1621 ttgccttctt cttcctgcat tgccgtctga aaatccatgc ccctgccttt cagatatgct
     1681 gcaaggcggt tgcggacatg cgaattgagt tcgatagatt tgagcatttt tcctccgttt
     1741 tcgataacga ttatatttaa tccgtctgta tgccttattt tatcatgttt cacgatcggt
     1801 ttgcctgtac aataccgctt ttcagtatga tgtgctggca tttatgtatt cttggttcaa
     1861 gctgtttcac ttgttttttg tcatttcgtg gtttgcaggg ctgttttacc tgccgaggat
     1921 tttcgtcaat atggcgatga ttgatgcgcc gcgcggcaat cccgagtatg tgcgcctgtc
     1981 ggatatggcg gtgcggctgt accgttttat gtcgccgttg ggcttcggcg cggtcgtgtt
     2041 cggcgcggcg ataccgtttg ccgccggctg gtggggcagc ggctgggtac acgtcaaact
     2101 gtgtttgggc ttgatactct tggcttacca gttgtattgc ggcgtgctgc tgcgccgttt
     2161 tcaggattac agcaatgctt tttcacaccg ctggtaccgc gtgttcaacg aaatccccgt
     2221 gctgctgatg gttgccgcgc tgtatctggt cgtgttcaaa ccgttttgac ggagcatctt
     2281 atgccgatag aaatcgaacg ccgttttttg attggaaacg acaactggcg gcaatacgcc
     2341 gacgaaccgc tgctgttgag gcagggttat ctgtctgttg aaaaagaacg caccgtccgt
     2401 gtccgcattg ccggacaacg ggcgtggctg acgctgaaag gctatatttc ggaaatcagc
     2461 cgcagtgagt ttgaatacga aatcccgctt gccgatgcgg aaaagatgat ggaaacgatg
     2521 tgcccgttta aaatggaaaa atggcgttat ccggtcagat ggggcggcag cctgtttgaa
     2581 atcgatgttt tccttggcga aaacgcgcct ttggtcgtcg cggaaatcga gttgcccgac
     2641 gagaatgccg attttgaccg tccggactgg ctggggcgcg aaatcactgc cgacggtatg
     2701 tttaccaatg cttatttgag caggcatccg ttctcaagct ggaaaaatgc cgtctgaaac
     2761 ggcttcagac ggcattctcc gacaaccatc gcaaatccaa agacagcctc tatatcctta
     2821 tttctgcttt ctttgttcca ttattcccaa taaatcccca taacctaaaa tctcgtcatt
     2881 cccgcgcagg cgggaatccg gttctttaaa cttcggtttt ttccgataaa ttgctttagc
     2941 ttttcgtttc cggattcccg cttttgcggg aatgacgatg gaagattgtt gttatttcgg
     3001 ataaattacc ctaactttaa aatcccggat tcccatcttc gggggaataa caatattttc
     3061 tatttcagcc catcatttgc gggggatttt atagagagtt tatatttcaa tatctcaaat
     3121 aatgcacaaa agcatagcgc gtgcctttgc tgctgacgcg gcgttccgtc cgccctgcct
     3181 ctttccaatg cgtccggtct atttcgggga aaaacgcatc tccttccaca gacaaatcca
     3241 cttcggttat ccgcaaatcg gtcgccaatg gcatcgcttg tccgtatatc tgcgcgccgc
     3301 ccataatgac ggcttcttcc gcgcctgcgc acaatgccaa tgccgcctcc aaacttgccg
     3361 ccgtttccgc gcctgccgcg caataatccg cctgccggct gatgacgatg ttcctccgtc
     3421 cgggcagggg tttgacgggc agggattccc acgttttccg ccccataatg acgggtttgc
     3481 ccaaggtata ggctttgaaa aatgcgaaat cttcggggat gtgccaaggc atagcattgc
     3541 ccgccccgat gcacaggttt tccgcacacg ccgcaattag ggttattttg agcatatttc
     3601 ctccacaaaa atgccgtctg aacgcttcag acggcatttt atgacattcc gtgtcaaaaa
     3661 tctcaaccgg cgcgcgccat acgttttttg tttgcacctg ccaacaatgc caacagttct
     3721 tcagtcgcgc cccaaccgat acacgcatcg gtaatgcttt tgccgtacac ttccggctta
     3781 tcctgtctgc cttcgaccaa atggctttcc accatcacgc ccataatatt gctcccgtcc
     3841 tgttccaatt gggcagcaat atcttgtgcc acttccatct gccgggtgta atccttgcgg
     3901 ctgttggcgt ggctgcaatc tatcatcagc ttatcggtta cccctgccgc acgcagttgt
     3961 tccgccgcct cgctgacgtg tcccgcatca taattcggct cttttccgcc gcgcaaaatg
     4021 acatgacagt cgggattgcc gccggtatgg acaatggcgg aatgtccggc cttggttaca
     4081 gacaagaaat gatgcgaatg gctcgccgca ccgattgcgt cgatggcaat cttcaaattg
     4141 ccgtccgtac cgtttttaaa gccgacgggg caggacagcc cgcttgccaa ttcgcggtga
     4201 acttggcttt cggtcgtccg cgcaccgatt gccccccaag aaatcaagtc cgcataatat
     4261 tgcggcgtaa tcatatccaa aaactcggta gaggcaggca tacccatatt gttcagcgac
     4321 aacaacaggc tgcgcgcctg acgcaaaccg aaattgatat cgaacgtacc gtccaaatgc
     4381 gggtcgttaa tcaaaccttt ccaacccacc gtcgtcctcg gcttctcgaa ataaacgcgc
     4441 atcacaatca aaagctcgtt ttcatactgc ttgcggagtt tcaacaaacg ctccgcatat
     4501 tccaacgccg ctttcggatc gtgaatcgaa cacggcccga taataaccaa cagccgcttg
     4561 tccctgccgt gaaccaaatc ggaaatttcc tgacgggtgc ggtgaaccaa gcccgaagcc
     4621 tctttggaaa tcggcagctc gtaaagatgg gcaatcggcg gcaacaactc tttaacttct
     4681 ttaatcttaa tatcgtctgt ggggtaatgg tgtgtcatct tgcatctttc ctgatggttt
     4741 tttatacgcg gcttaggtta catcgtttac cttgcacaaa caagtgcaac atattactac
     4801 aaagctattt tatttcaaaa taactgatat atcttttttc atagatttta aatttcatat
     4861 ttttaatatt ttaggaattt tattccaaag aaaaagaaac agattgataa aaacaatacc
     4921 cgccattcat tcggacaaaa ccgcacggaa catccgtttt cccatttcca cgacaatccg
     4981 gtacagaaca ccccgctgcc gattccgcct gcacatccgg caaaatttca tacacaagga
     5041 aaatgttgaa aacaaaaaga actcattgct tgaaaaaaga tttaatggga atgcgggtat
     5101 ttcccacact ttttccattt atttatcctc attataggaa gaaaaacatg aaaaaaccct
     5161 gcttgcactc tcacttgcag ccgtgtccgc cgttacggta gccgatattc ccgagtctaa
     5221 cggcaaaggc aaagccatca tcggcgataa ggaaaaacac cgttaccaag catgaaaacc
     5281 ttgctttgaa agtccatggc gaaatccgcc aagatttggg ggacggatga tccctaaccc
     5341 cttgggcgga tgcatatgca gatttgcgcg gcaaaaccaa agtgatgacg acccagatgt
     5401 gtgcttcccg cgatgtcagc aaaagcgcca aaggttggag tgtcggtatc ggtctgaatg
     5461 taggcaaaca gttgaccgac agcgtcggtc tcgagtttga tccatactac cgtcacaaaa
     5521 caatctgcaa accccgtgag attgttttgg acggcgacaa aaccaaaatg ggccgctcca
     5581 aatccaacga gtacggcttc cgcgtagccg caacgttcta ta
//
LOCUS       DAWKOX010000133         5580 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.133, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000133 DAWKOX010000000
VERSION     DAWKOX010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5580
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.133"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            49..522
                     /locus_tag="WJK78_001608"
     CDS             49..522
                     /locus_tag="WJK78_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ7598512.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVEGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMPAMNHGHHHGEAHQH"
     gene            648..1751
                     /gene="mnmA"
                     /locus_tag="WJK78_001609"
     CDS             648..1751
                     /gene="mnmA"
                     /locus_tag="WJK78_001609"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ7598513.1"
                     /translation="MNTTANTTNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQSTDKPVIITR"
     gene            1822..3492
                     /locus_tag="WJK78_001610"
     CDS             1822..3492
                     /locus_tag="WJK78_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEZ7598514.1"
                     /translation="MEKIWLDSYEQGVNAEIDITQYGSVSDVFCQSVKKFAGQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFVIRKIKKMVPEYRIRETISFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIVLITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITDTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVRGPQVMKGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLIVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVRKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            3604..5238
                     /locus_tag="WJK78_001611"
     CDS             3604..5238
                     /locus_tag="WJK78_001611"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ7598515.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGVHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     TGSLAAKIYGSGHIRERHRHRYEVNNNYVPMLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            5253..5455
                     /locus_tag="WJK78_001612"
                     /pseudo
     CDS             5253..5455
                     /locus_tag="WJK78_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246312.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         1482 a         1519 c         1404 g         1175 t
ORIGIN      
        1 ctataagatt aagcacattc cccgtctgat attataagga gcagaaagat gaaaaaatta
       61 ttggcggccg tgatgatggc aggtttggca ggcgcggttt ccgccgccgg agtccacgtt
      121 gaggacggct gggcgcgcac caccgtcgaa ggtatgaaaa taggcggcgc gttcatgaaa
      181 atccacaacg acgaagccaa acaagacttt ttgctcggcg gaagcagccc cgttgccgac
      241 cgcgtcgaag tgcataccca catcaacgac aacggcgtga tgcggatgcg cgaagtcgaa
      301 ggcggcgtgc ctttggaggc gaaatccgtt accgaactca agcccggcag ctatcacgtg
      361 atgtttatgg gtttgaaaaa acaattaaaa gagggcgaca agattcccgt taccctgaaa
      421 tttaaaaacg ccaaagcgca aaccgtccaa ctggaagtca aaatcgcgcc gatgccggca
      481 atgaaccacg gtcatcacca cggcgaagcg catcagcact aatctgctga aaatgtttga
      541 aatgccgtct gaaaaagccc gggctttcag acggcatttt tatgaccgcc tttaaaatgt
      601 gttaaaatct gcctttaaaa accgccgttt ccaaccatat tctacgcatg aatacgacag
      661 caaacaccac caatatcatc gtcgggctct ccggcggtgt cgattcttcc gtaaccgccg
      721 ccctgctcaa gcagcagggt tatcaagtgc gcggtgtgtt catgcagaac tgggaagacg
      781 acgacaacga cgaatattgc agcatcaaac aggattcgtt cgatgccatc gccgttgccg
      841 atattatcgg catcgatatc gacatcgtta atttcgccgc gcaatataaa gacaaagtct
      901 ttgcttattt tcttcaggaa tacagtgcgg ggcgcacgcc gaatccggat gtgttgtgca
      961 acgccgaaat caaattcaaa tgctttttgg actacgccgt agggcagggc gcggatacca
     1021 tcgccaccgg ccactatgcg cgcaaagaag ttcgcaacgg cgtgcattac ctgctcaaag
     1081 gtttggatcg aaacaaagac caaagctatt tcctctaccg cctcaagcct ttccaactcg
     1141 aacgcgcgat ttttccgttg ggcggtttgg aaaaacccga agtgcgccgc cttgccgccg
     1201 agttcaaact gccgaccgcc gccaaaaaag acagcacggg catctgcttc atcggtgaac
     1261 gcccgtttcg cgagtttctg caaaaatacc tgccgaccga caacggtaaa atggttacgc
     1321 ccgaagggaa aaccgtcggc gaacacgtcg ggctgatgtt ctacacgctc ggacagcgca
     1381 aaggtttggg catcggcggc gcgggcgaac cgtggtttgt tgcggctaaa gatttgacga
     1441 aaaacgaact gattgtcgtg caaggacacg accatccgct gctctatacc cgcagccttg
     1501 tgatgaacga tttgagtttc acgcttcccg aacgcccgaa ggcaggacgc tatacctgca
     1561 aaacgcgtta ccgtatggcg gacgcgcctt gtgagttgcg ctatttggat gaagaaaccg
     1621 ccgagctggt gtttgacgaa ccgcaatggg cggttacgcc gggccagtct gccgtgctgt
     1681 acgacggcga catctgtttg ggcggcggca ttatccaatc aaccgacaaa cccgtcatca
     1741 tcacacgata aaggtaatgc cgtctgaaac ggttttcaga cggcattgtt ccgctcaatt
     1801 ccactttaaa gaccgatacc tatggaaaaa atctggttag acagttacga acagggcgtg
     1861 aatgccgaaa tcgacatcac gcaatacggt tccgtcagcg atgtattttg ccaaagtgtc
     1921 aagaaatttg ccggccaacc tgcttttcaa aacatgggca agacgctgac ttatgccgaa
     1981 accggcaaac tggcaacaga ttttgcttct tatctgcaaa acgtcctgaa gctgccgcgc
     2041 ggcgaacgtg ttgccattat gctgcccaac gtattgcaat acccgattgc ccttttcggc
     2101 attttgcagg caggtttggt agcggtgaac accaatccgc tctatacccc gcgcgagctg
     2161 gagcatcagt tgaaagacag cggcgcgacc gccatcatcg ttttggaaaa tttcgccaac
     2221 acgctggagc tggtgctgcc gcgcacgcag atcaaacacg tcatcgtagc ctccgtcggc
     2281 gaaatgttcg ggctgcttaa aggttcgctg atcaatttcg tcatccggaa aatcaagaaa
     2341 atggtgcccg aataccgtat tcgggaaacc atttcctttc agacggcatt gaaagagggg
     2401 gcgaagcacg ttttccaacc tgtcgcatta aaccgcgaag ataccgcgct gttgcaatac
     2461 acgggcggca cgacaggtgt tgccaaaggg gcggtgctga gccacggcaa catctgcgcc
     2521 aatatgcttc aggcaaaaga atggattaaa aaccagttgc gtgagggaaa agaaaccgtt
     2581 atcgccgcct tgccgctgta ccatattttt gccttaaccg tgaatctgat gatttttgcc
     2641 aatgccggct cgaaaattgt cctgattacc aacccgcgcg atatgaaagg ctttatcgga
     2701 gaactgaaaa aacagcgggt taatgtattt atcggcgtga acacgctgtt taacgcgatg
     2761 gttaaccgtc ctgattttgc cgaagtcgat ttttcaggat tgcggctgac tttgggcggc
     2821 ggtatggcga cccaaaaagc cgttgccgaa aaatggaaaa aaatcaccga cacgcccatc
     2881 gtcgaagcct acggtctgac cgaagccagc cccggcgtgt gctgcaaccc cttaaacatc
     2941 gaatcataca gcggcagcat cggtttgccc gtctcgtcca ccgaagtcga actgcgcgac
     3001 gcaaacggca aagaagtccc cgtcgggcag ccgggcgaat tgtgggtgcg cggcccgcaa
     3061 gtcatgaaag gctattggaa ccgtcccgaa gaaaccgcta aagccataga cgcgcgcggt
     3121 ttcttggaaa ccggcgatat tgccgtcatg gacgaaaaag gctggttgaa gctggttgac
     3181 cgtaagaaag acctcattgt tgtttctggt tttaatgttt atccgaacga aatcgaggaa
     3241 gtcatcgcgc atcacggcaa agtgatggaa gtcgcctgta tcggcgttcc cgacgaaaaa
     3301 accggagaag ctctcaaagt gtttgtcgtc agaaaagatc cgtctttgac gaaagaagaa
     3361 cttatcgcct tttgccgcac cgaattaacc gcatataaag taccgaaaaa tatcgaattc
     3421 cgcgacgagt tgcccaagtc caacgtcggc aaaatcctgc gccgcgagtt gcggcaaagt
     3481 actgggaaat aaagaaaaga tgccgtctga aaacagccgt ccaccgttca gacggcatcc
     3541 gtccgtttgc cagaaccgcg cgcttcaagt taaaatcgca cattccaaca tgggtattcc
     3601 atcatgacca aattcatttt cgtaaccggc ggcgttgtct cctcactggg taaaggtatc
     3661 gccgccgctt ctattgccgc tatcctcgaa tcgcgcggct tgaacgttac catgctcaag
     3721 cttgatcctt atatcaacgt cgatcccggc acgatgagcc cgtttcaaca cggcgaagtg
     3781 ttcgtaaccg acgacggcgc ggaaaccgac ctcgacttag gacactacga acggtttatc
     3841 gattccacga tgacccgccg caacagcttc agcacggggc aggtgtacga aaacgtcatc
     3901 gccaaagaac gacggggcga ctacctcggc ggcacggttc aagtcatccc gcacattacc
     3961 gacgaaatca aacgccgcat ccacgaaggc gcggcaggtt acgatgtggc gattgtcgaa
     4021 atcggcggca cggtcggcga catcgaatcg ctgccgtttt tggaagccat ccgccagatg
     4081 cgaagccagt tgggacgcaa caacaccctg ttcgcccact tgagctacgt cccctacatc
     4141 gccgctgcag gcgaaatcaa aaccaagccg acccagcaca ccgttaaaga aatgttgagc
     4201 atcggtttgc aacccgacat cctgatttgc cgtatggaca ggacaatgcc tgcggacgaa
     4261 cgccgcaaaa tcgccttgtt ctgcaacgtg gaagaacgcg cgattgtcgg cagctacgat
     4321 gtggacagca tctacgaatg ccccgaaatg ctgcacgacc aaggcatcga caacatcatt
     4381 accgagcagt tgcagcttaa tgtgcagcag gcggatttga ccgcgtggaa aaaaatcgtc
     4441 cacgccatcc aaaacccgaa acacaccgtc aaaatcgcca tggtcggcaa atacgtcgat
     4501 ttgaccgaat cctacaaatc actgattgaa gccttgaaac acgcaggtgt tcacaccgaa
     4561 accgacgtac aaattacctt tgttgacagc gaaagcatcg agaaaaacaa cggcgacgtt
     4621 tctatgctca aagatatgga cgccatcctc gttcccggcg gtttcggttc gcgcggcgtg
     4681 gaaggcaaaa tcgccgctgt gcgctatgcc cgcgaaaaca acgtgccata cttgggcatc
     4741 tgcctcggta tgcagattgc gctgatcgaa tacgcccgcg acgtggcagg tttgaaaggt
     4801 gcgaattcca ccgagttcga cctcaaatgc gccgcccccg tcgttgccct gattgacgaa
     4861 tggcaaactg ccgacggcag cgtcgaaacc cgcgacgaat ccgccgattt gggcggcacc
     4921 atgcgtttgg gcgcgcaaga agtcgaattg aaaacaggca gcctcgccgc caaaatctac
     4981 ggcagcggac acatccgcga acgccaccgc caccgctacg aagtcaacaa caactatgtt
     5041 cctatgctgg aacaggcagg tttggtcatc ggcggcgtat ccgccggacg cgaacgcttg
     5101 gtcgaaacca tcgaactgcc gaaccatcct tggttcttcg cctgccagtt ccaccccgag
     5161 tttacctcca atccgcgcaa agggcatcct ttgttcaccg cgtttgtcaa agctgcgttg
     5221 aacaataaaa aagcctgata aagcgttact tgatgatcaa aatgccgtct gaaagcctga
     5281 atgaagactt tcagacggca ttttcgcaaa tcggggatta taaaagccat caatttaatt
     5341 tttatggttt tatctaatat ttaccaactg aatattgtta agcggggcgt gaaactcaag
     5401 ttgagacctt tgcaaaattc cccaaaatcc cctaaattcc caccaagaca tttaggagca
     5461 ccttcttccg gcaaaccgcc caagccatga ttgccaaaca catcgaccgt ttcccgctat
     5521 tgaagttgga ccgggtgatt gattggcagc cgatcgaaca atacctgaac cgtcaaaaaa
//
LOCUS       DAWKOX010000134         5562 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.134, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000134 DAWKOX010000000
VERSION     DAWKOX010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5562
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.134"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            98..904
                     /locus_tag="WJK78_001613"
     CDS             98..904
                     /locus_tag="WJK78_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ7598516.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            complement(962..2227)
                     /locus_tag="WJK78_001614"
     CDS             complement(962..2227)
                     /locus_tag="WJK78_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003420866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEZ7598517.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDDTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGITLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKIVAVSTVDVAIYNENGLDMEAIIKEFQTKGFITNE
                     AGYGKEISNAELLALEVDVLAPCALENQLTSENAGKVRATIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            2634..3341
                     /locus_tag="WJK78_001615"
     CDS             2634..3341
                     /locus_tag="WJK78_001615"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ7598518.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLSNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKEE"
     gene            3398..3859
                     /gene="recX"
                     /locus_tag="WJK78_001616"
     CDS             3398..3859
                     /gene="recX"
                     /locus_tag="WJK78_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ7598519.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            3933..4094
                     /locus_tag="WJK78_001617"
     CDS             3933..4094
                     /locus_tag="WJK78_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598520.1"
                     /translation="MSEQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWAGVLALVF
                     FLVFRFWLS"
     gene            4247..4729
                     /locus_tag="WJK78_001618"
     CDS             4247..4729
                     /locus_tag="WJK78_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ7598521.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(4936..>5562)
                     /locus_tag="WJK78_001619"
     CDS             complement(4936..>5562)
                     /locus_tag="WJK78_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ7598522.1"
                     /translation="RAWNGMTDNMLSIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQT
                     PVKPAAQPPVQSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVV
                     ADFGGNNKGVDIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQ
                     KLLVGEGQQVKRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT         1438 a         1626 c         1294 g         1204 t
ORIGIN      
        1 aaaagacagt tttcagacag caaatccgtc ttcacacgat acctattttg ttataacata
       61 acaaaatctt taacccacac gagacaaagg ctgcaccatg aagaaaacat tgacactgct
      121 cgccgtttcc gccctatttg ccacatccgc ccacgcccac cgcgtctggg tcgaaaccgc
      181 ccacacgcac ggcggcgaat accttaaagc cgacttgggc tacggcgaat ttcccgaact
      241 cgaacccatc gccaaagacc gcctgcacat cttcagcaaa ccgatgcagc tggttaccga
      301 aaaaggcaag gaaaacatga ttcaacgcgg cacatacaac taccagtacc gaagcaaccg
      361 tcccgttaag gacggcagtt acctcgtcat cgccgaatat cagcctactt tctggtcaaa
      421 aaacaaagca ggctggaaac aggcgggcat caaagaaatg cctgacgcaa gctattgcga
      481 acaaacccgt atgttcggca aaaacatcgt caacgtcgga cacgaaagcg cggacaccgc
      541 catcatcacc aaaccggtcg gacaaaactt ggaaatcgtc ccgctggaca atcccgccaa
      601 cattcacgta ggcgaacgct tcaaagtccg cgttctgttc cgtggcgaac cgctgcccaa
      661 tgccaccgtt accgccacct ttgacggctt cgacaccagc gaccgcagca aaacgcacaa
      721 aaccgaagca caggctttct ccgacagcac agacgacaaa ggcgaagtgg acatcatccc
      781 cttgcgccaa ggcttctgga aagccaatgt cgaacacaaa gccgacttcc ccgatcaaag
      841 cgtgtgccaa aaacaggcga actactcgac tttaaccttc caaatcggcc attcgcacca
      901 ttaatcccgc ccgcacaaaa atgccgtctg aaggcttcag acggcatttt ttgttcaaac
      961 atcaatacca accgcgcagt ttcatcgctt tttcaacacg gcggatactc atcatataag
     1021 acgcggttcg caaatcgaca tcgtattctt gagccaagtt ccaaatatcg cggaacgctc
     1081 ggcgcaggac gacggtttct ttctcttgaa cttcgtcaaa ctcccaataa tagccttgca
     1141 ggttttgcac ccactcgaaa taggaaacga ccacgccgcc gcagttcgcc agaatatcag
     1201 gcacgaccaa tacgccgttt tgacgcagga taacgtctgc ctctggagta gtcgggccat
     1261 ttgcgccttc gaccacgatt gtcgcgcgga ctttaccggc attttcagaa gtcagttggt
     1321 tttccagtgc gcaaggggca agtacgtcca cttccagagc caaaagttcg gcattgctga
     1381 tttctttacc gtagccggct tcattggtga tgaaaccttt ggtttggaat tctttgatga
     1441 ttgcttccat atccaagcca ttttcattgt agatggcaac gtcaacagta gaaacggcaa
     1501 cgattttcgc accggattga tgcgcgtaat aacctgtgtg gtagccgaca ttaccgaaac
     1561 cttgaatggc gtaagtggca cccttcacgt ctttgcccag tttttccaaa gcttggacgg
     1621 cagcgagatt cacgccgtaa ccggtggctt cggtacgcgc caaagagccg ccgaactcaa
     1681 ccggtttgcc ggtaaatacg cccggtgcag aatgtttcac cacgttttca taggcatcaa
     1741 ccatccaaga catgattttg ccgttggtgt tcacatcagg tgcgggaata tcgattttct
     1801 cgccaatcag cggagaaatg gcttcggaat aagcgcgggc gatgcgttcc agttccgcct
     1861 cggaataatc gcgcggatcc aaggtaatgc cgcctttgcc gccgccataa ggaatacccg
     1921 caacgcagca tttgatggtc atccaaatcg acagggcttt gacttcgtcc agattcacac
     1981 caggatgaaa gcgcacgccg cctttatagg ggccgacggc gttgttgtgt tgcgaacggt
     2041 agcccgtgaa ggttttgacc gtgtcgtcgt cgagtttgac ggggaaattg acttccaaca
     2101 cgcgggtcgg actcttcagg atttcataaa cggccggatc ggttttcagc cggtcgcagg
     2161 cggttttgac ctgtttgcgc gcgatttcaa acggattgag ggtttctttt gcaagggctt
     2221 cagacatttt gcttcctttt cacaaaaaga ttttcagggg cgtgcatttc gctcattact
     2281 ataaccaatt tcccgacaaa atgtaatagc gtgtagtcgg cataagcccg atttgattaa
     2341 tctatatatg attttatttt tcaagccgca cggaatcagc ccggactccg cctgaaaaag
     2401 cagcgcgcgc atccgaaaaa taaatgtcaa attaaataaa gatataggca tccttttatt
     2461 ttttaaaaat ttaattggaa catcgccggg atttcaaacc cttgcccgat tccgccccga
     2521 aatccgaaaa caccgcctgc aaaacctgtt gcgattgtta acaatctata cattagaagc
     2581 cctgtgcaaa cgatgttaaa ataaaccctt tcaacccgac aggaaatcag attatgaatg
     2641 cagccatcga acacgtccaa gccgtcgcct tcgatttgga cggcacactg tgcgattccg
     2701 tccccgacct tgccgccgcc gcagaagcga tgttggaaca actcggtatg aaaccgctgc
     2761 ccgccaaagt ggtcgaaagc tatgtgggcg acggcatcgg caaactggtt caccgcgtcc
     2821 tctccaacga ccgcgaccgc gaagccgatt ccgaactgtg ggaaaaaggt ttcgtatcct
     2881 atatgaaata ctaccgcgac catttgagcg tcttcacccg cccctatccc gaaaccgaag
     2941 ccgggctggc attgctcaaa tctttgggca tcccgctggc agtcattacc aataaaaacg
     3001 aaatccttgc cgccgaactg ttgaaacagc tcggacttgc cgactacttc agcctgatac
     3061 tcggcggcga cagcctgccc gaaaaaaaac ccagccccct gccgctgcgg cacgccgccg
     3121 aagttttggg tatcgatgtt gcaaacatgg ttatggtcgg cgactcgcgc aacgacatca
     3181 tcgccgccaa agccgccggc tgcctgagcg tcggcgttac cttcggttac ggcgatatga
     3241 cgctgctctc gcaagacgat gcgacccgcc ccgactggat tatcggctcg ctgcccgaaa
     3301 tttacgaaaa cctgcaaccg cagaaaaata aagaagagta ggcattcgga cggcacgcta
     3361 tgccgtctga aacctgccgc acgccgaaac tgccgccatg aaaccgcaaa aatccctacg
     3421 cgcccgcgcg atggacatcc tctcgcgcca agaagtcagc cgcatcggtc tgaaacgcaa
     3481 acttgcaccg cacgccgaaa gcgaagaaga gttggaaaac gtgttaaacg aatttgccga
     3541 acgcaactgg cagtcggatt tgcgctatgc cgaagcctat atccgcagca aaagccgcaa
     3601 acacggttca ttgaggctga aacaggcttt ggcgcaacag ggcatagatg aagaaaccag
     3661 ccgcaacctg cttcccgacc gctcaagcga aaaacaggcc gccatagacg tgttgcgtaa
     3721 aaaattcaaa caccccgccg ccgaccttaa agaaaaacaa aaacaggcgc gtttcctcgc
     3781 ctatcgcgga ttcgatgccg ataccgttca gacggcattg aaacacgctt gggacgaaaa
     3841 ttgggaagac ggctgctgac cttccttctt gaatcttttt gcacggcaac ataaccttac
     3901 gcccgtttcc aacttttccg attgagaaca aaatgtccga acaacccgaa aaacaccaca
     3961 cctcccccat cgaagacgaa cgcaaaaacc cggtttaccg tatgggacgg gctgttgccg
     4021 gattcatgct cgtcgtttgg gcgggcgtat tggcactcgt gtttttcctg gtcttccgtt
     4081 tttggctttc ctaaacaaaa tgccgtctga aaccttcaga cggcatcggc agcccatttc
     4141 ggcaggctat cccatcatag ctttttttag cttgaattcc actttcccat tccctaaaat
     4201 ttttccacac ccatttcaaa ataccctttc ttaaaacagg tacactatga cacaacaacg
     4261 ccaactgcct tcccacgaac tcattatgtc cgaactgatg atgccggaca ccgccaattt
     4321 cagcggcaac gtacacggcg gcgaactcct gctcctgctc gaccaggttg cctattcctg
     4381 cgccagccgt tacagcggca attattgcgt taccctgtcg gttgacaaag tcctgtttaa
     4441 agaacccatc cacatcggcg atttggttac cttttacgcc gctgtcaact acacgggacg
     4501 cacctcgatg gaaatcggca tccgtgtcga agcacaaaac atccgcaccg gcgaaatccg
     4561 ccacaccaac agctgctact tcacgatggt tgcggtcaaa gacggcaaac ccgtccctgt
     4621 ccctccgctg gaaatcctga ccgaccgcca acgctgccgc tacgaaaaag ccaaaaaacg
     4681 cagagacatc agcctgcaag cctctgaaga catgtcctgc ggctgctgac ggcggactat
     4741 gccgtctgaa agacaggcac atcgcgccat ccgtttctac tgcaaacgga tgaaatcaag
     4801 caaataccca aacacagtca aacaaattta tatgccccgt cccttccgaa tgatttgaaa
     4861 acacagccgc caaaaacaaa aatgccgtct gaaaaccttt cagacggcat ttccaacttg
     4921 atttcaggca gaaagtcaga acgcgatata gctgttcggg ttaaccggtt tgccgttttg
     4981 ccgcacctcg aaatgaagct gcgttctgga agcgtcggta ttgcccatca aagcgacctg
     5041 ctgcccgcgt ttgacctgct ggccttcgcc gaccagcaat ttttggttgt gcccgtatgc
     5101 ggtcaggaag gaagaattat gctggatgat gaccagattg ccgtatcccc tcaaaccgga
     5161 acctgcataa accactttgc cgtcagccgc cgccaaaacg ggctgtcccg cattaccggc
     5221 aatatcgaca cccttgttgt tgccgccgaa atcggcaacc actttacctt gcgtcggacg
     5281 ctgccaaaca atgccgccga ccgaacgcgt tccggaaggc gaagcggcag gagattgcgg
     5341 ggcgggcgcg ggaaccgctt tattttccgc agcgggcgcg gcaggttgcg gcgcggactg
     5401 cacaggcggt tgcgcggcgg gtttcacagg ggtttgcacg gcagccggta cggcgggcct
     5461 gctttctacg gctgcggttt tcggtgcggc atatcctgcc ggtttgactt taacaatctg
     5521 accgatgctc aacatattgt cggtcatgcc gttccacgca cg
//
LOCUS       DAWKOX010000135         5535 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.135, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000135 DAWKOX010000000
VERSION     DAWKOX010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5535
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.135"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(59..880)
                     /locus_tag="WJK78_001620"
     CDS             complement(59..880)
                     /locus_tag="WJK78_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ7598523.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            1291..3675
                     /gene="ppsA"
                     /locus_tag="WJK78_001621"
     CDS             1291..3675
                     /gene="ppsA"
                     /locus_tag="WJK78_001621"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ7598524.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMRH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFSINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYSGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            3894..5153
                     /gene="rho"
                     /locus_tag="WJK78_001622"
     CDS             3894..5153
                     /gene="rho"
                     /locus_tag="WJK78_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ7598525.1"
                     /translation="MHVSELQTLHISKLLELAEEHAIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEAAEFLIGKIKASKNNDDFFELMRGK"
     gene            5459..>5535
                     /locus_tag="WJK78_001623"
     CDS             5459..>5535
                     /locus_tag="WJK78_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7598526.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTART"
BASE COUNT         1452 a         1612 c         1298 g         1173 t
ORIGIN      
        1 tgccgtctga aacctgattt cagacggcag ttccgccttc aaaccgaatc aaagcccgtc
       61 aaaacctgcg tttgagcttg cacgcctgaa ggatgtgtac cgccaattcc tcaaccgatt
      121 tatccgtcgt attcgcaaac ggaatgccat gccgtctgaa catactctgc gcgtccgcca
      181 cctcgctgcg gcatgtatcg attttggcat aagttgaatt cgggcggcgc tcttggcgga
      241 tggcctgcaa acgttccggc tggatggtca acccgaacag cttatcccta taaggcttga
      301 ccatacgcgg cagatcggcc gattccaaat cgtcgggaat cagcggatag tttgccgcac
      361 ggatgccgta ttgcagggcg aggtaaaggc aggtcggcgt tttgcccgaa cgcgatacac
      421 ccatcaagat tacatccgct tcctgaaggt tcttatcgct gaccccgtca tcgtggttca
      481 atgagaaatt caccgcctcc atacgcgcat cgtaacgctt cgtattaccg atactgtgat
      541 gcccctgctc ggatgccgtg gcttcggtat tgagttcttt ctccaacagt cccaaaaaag
      601 tctcaaagaa attaatctga aaagcatccg cccctttgat aatccgacgg atttcgtcat
      661 caaccacact gacaaacgca atcggacgct gaccgttttc ctgccggctc cgattgacct
      721 tctccaccac cgcgcgcgcc ttttccggcg tatcgacaaa cggatgcgta tggcgtttga
      781 acgacagatt gccaaactgg ttcagcaaag cctcgccgat attctcggca gtcagaccgg
      841 tacggtcgga aatgtaaaac acatggcgcg gactgctcat cttccatcct taaatacaga
      901 ataaaaatat catcataaca gcagcggcag acacaaggaa agcacccgca gcacgcctac
      961 ctcggattac acccaaacag acacaatata attttgaaat aaaattattt atataaagta
     1021 ttttttggca gaaaatttta aaaaataaac aaaaaaatca aacagaaaaa acattaacct
     1081 attcaaacca cctgttttac aaagaaaata cccaaaaaaa gaagtatacc ggctgcaagt
     1141 ttcaaaccgc tacacacgcc gaaaccgcaa tttttcagac ggcatcatga ttttaaaatg
     1201 gataaaacac atgacagcag aggaacgaat cgcttaaaat aagcacgcgg atttgtttct
     1261 tttttaacat attttggatt ggacacacaa atggccgaca actacgtaat ctggtttgaa
     1321 aacctgcgta tgacagatgt tgaacgcgtg ggcggtaaaa acgcctcgct gggcgaaatg
     1381 atcagtcagc tgaccgaaaa aggcgttcgc gtccccggcg gctttgccac cacagccgat
     1441 gcctaccgcg cattcctcgc acacaacggt ctgagcgaac gcatttccgc cgcactggca
     1501 aaattggatg tcgaagacgt tgccgaactg gcacgcgtcg gcaaagaaat ccgccaatgg
     1561 attttggata cgcctttccc cgaacagctc gatgccgaaa tcgaagcggc atggaacaaa
     1621 atggttgccg atgccggcgg cgcggacatt tccgttgccg tacgttcttc cgcaaccgcc
     1681 gaagacctgc ccgacgcatc atttgccggc caacaggaaa ccttcctgaa tatcaacggc
     1741 ttggaaaacg ttaaagaagc gatgcgccat gtattcgcct ccctgtacaa cgaccgcgcc
     1801 atttcttacc gcgtccacaa aggcttcgaa cacgacatcg tcgccctttc cgccggcgtg
     1861 cagcgtatgg tgcgttccga cagcggcgcg tccggcgtga tgttcaccct cgataccgaa
     1921 tccggttacg accaagtcgt ctttgtcact tcatcctacg gtctgggcga aaacgtcgta
     1981 caaggcgcag tcaatcccga cgaattctat gtgttcaaac ccacgctgaa agcaggcaaa
     2041 cctgccatcc tgcgcaaaac catgggctca aaacacatca aaatgatttt taccgacaaa
     2101 gcagaagccg gcaaatcggt aaccaacgtc gatgtccccg aagaagaccg caaccgcttc
     2161 tccattaccg acgaagaaat caccgagttg gcgcattacg cactgaccat cgaaaaacac
     2221 tacggccgcc cgatggacat cgaatgggga cgcgacggct tggacggcaa actctacatc
     2281 ctgcaagccc gtcccgaaac cgtcaaatcc caggaagaag gcagccgcaa cctgcgccgc
     2341 ttttctatca acggcgaaaa aaccgtcttg tgcgaaggcc gcgccatcgg tcagaaagtc
     2401 ggtcagggca aggtacgcct gattaaagat gcttccgaga tggattccgt cgaagccggc
     2461 gacgtactgg ttaccgacat gaccgaccca gattgggaac cggtgatgaa acgcgcttcc
     2521 gccatcgtga ccaacagggg cggacgtacc tgccacgccg ccatcatcgc gcgcgaactg
     2581 ggtattcctg ccgttgtcgg ctgcggcaat gcaaccgaat tgctgaaaaa cggtcaagaa
     2641 gttaccgtat cctgtgccga aggcgatacc ggcttcatct actccggcct gctggacgta
     2701 caaattaccg atgttgcttt ggacaacatg cctaaagcac ctgtaaaagt catgatgaac
     2761 gtcggcaatc ccgaactcgc attcagcttc gccaacctgc ccagcgaagg catcggcttg
     2821 gcgcgtatgg aatttatcat caaccgccaa atcggtatcc accccaaagc cttgttggaa
     2881 tttgacaaac aagacgacga attaaaagcg gaaattaccc gccgtatcgc cggttacgcg
     2941 tcccctgtcg acttctacgt cgataaaatc gccgaaggcg tggcgacatt ggccgcatcg
     3001 gtttatccgc gtaaaaccat cgtccgtatg tccgacttca aatccaacga atacgccaac
     3061 ctggtcggcg gcaacgtata cgaaccgcat gaagaaaacc cgatgttggg cttccgtggt
     3121 gcggcgcgtt atgtcgccga caacttcaaa gactgtttcg ccttggaatg caaagccttg
     3181 aaacgcgtcc gcgatgaaat ggggttgacc aacgttgaaa tcatgattcc gttcgtccgc
     3241 actttgggcg aagccgaagc cgttgtcaaa gccctgaaag aaaacggttt ggaacgcggc
     3301 aaaaacggcc tgcgcctgat tatgatgtgc gaactgccga gcaacgcggt attggcggaa
     3361 caattcctgc aatacttcga tggcttctcc atcggctcga acgacatgac ccaactgacc
     3421 ctcggtctcg accgcgacag cggcttggtg tccgaatcgt ttgacgaacg caaccctgcc
     3481 gtcaaagtga tgctgcacct tgccatctcc gcctgccgca agcagaacaa atatgtcggc
     3541 atctgcggtc aaggcccgtc cgaccatccg gactttgcca aatggctggt tgaggaaggc
     3601 atcgaaagcg tgtctctgaa cccggatacc gtcatcgaaa cttggctgta tttggcgaat
     3661 gaattaaaca aataatcaat gcccataccc ccgtgcctga aaagcgcggg ggtatttttt
     3721 ccaagcagct ccgctcagac ggcatttcct gccgatgccc cgtccgcgat aatatttgac
     3781 acccacgcgc cgactgccta caattcccct ttctccgagc aaccgccaac ggtcagcttc
     3841 ttctttcaga cggcatctgc ctgtcttttt cctcttcaaa atacatcatt attatgcacg
     3901 tctccgaatt acaaaccctg cacatttcta aacttttaga gttggcagaa gaacacgcta
     3961 tcgaaaatgc caaccgtttc cgcaaacaag acctcgtatt tgccatcgtc cgccagatga
     4021 tgaaaaaagg cgagggtttc acctgctccg gcacgcttga aatcctgccc gacggcttcg
     4081 gcttcctccg cagcgcggac acctcctatc ttgccggccc cgacgacatc tatgtctcac
     4141 ccacccaaat ccgccgcttc aacctgcata cgggcgacac catcgaaggc agcgtccgcg
     4201 tccccaaaga caacgaacgc tattttgccc tggtcaggct tgataccatc aacggcgacc
     4261 acccggaagt atgccgccat aaaatcctgt ttgaaaacct gaccccgctg tttccgaccg
     4321 aacagttgaa gctggaacgc gacttaaagt ccgaagaaaa ccttaccgga cgcgccatcg
     4381 acctgatttc gcccatcggt aaaggtcagc gcgccctctt ggttgctccg cccaaaagcg
     4441 gtaaaaccgt gatgctgcaa aacattgccc acgccgttac cgcaaactat cccgaagtcg
     4501 aactcatcgt cctcttgatt gacgagcgtc ccgaagaagt aaccgaaatg agccgttccg
     4561 tccgcggcga agtggtttcc tccacctttg acgaaccggc gcaacgccac gtccaagttg
     4621 ccgaaatggt gcttgaaaaa gccaagcgta tggtagaaca caaaaaagac gtggtcatcc
     4681 tgctggattc gattacccgc cttgcccgcg cctacaatac cgtcgtcccc acctcgggca
     4741 aaatcctgac cggcggtgtc gatgccaacg cgctgcaccg ccccaaacgt ttcttcggcg
     4801 cggcgcgcaa cgtggaagaa ggcggttcgc tgaccatcat cgccaccgca ttggttgaaa
     4861 ccggcagccg tatggacgat gtgatttacg aagaattcaa aggcaccggc aatatggaat
     4921 tgcaccttga ccgccgtatg gcggaaaaac gcctcttccc cgccatcaac atcaacaaat
     4981 ccggcacgcg ccgcgaagag ctgcttgtgc cgaacgacca gttgcaacgt atgtggctct
     5041 tacgcaagtt cctgcacccg atggacgaaa tcgaggcagc cgaattttta atcgggaaaa
     5101 tcaaagcctc taaaaacaac gacgatttct ttgaactgat gcgcggcaaa taaacgcgcc
     5161 gcccgcatta atgcgaaatg ctgtctgaag cctgaaaatc gggtttcaga cggcactttc
     5221 attcacacgg tcggcgcagc tcctccctcc ccccgttaac ggcgcaaccg tcggcagtgt
     5281 ccgtgtccgc ttgccgaaag cgcggccttt gcaaaaccgg cttgaacgca tccgtaccgg
     5341 caatgaaaac cgatgcggga acttgattca aggttgcgcc gaaccgcgct catttttgta
     5401 taaatttggg gctgtcctag ataactaggg aaattcaaat taagttagag ttgcctttat
     5461 gagaaaaagt cgtctaagcc ggtataaaca aaataaactc attgagctat ttgtcgcagg
     5521 tgtaactgca agaac
//
LOCUS       DAWKOX010000136         5469 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.136, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000136 DAWKOX010000000
VERSION     DAWKOX010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5469
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.136"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            181..2424
                     /locus_tag="WJK78_001624"
     CDS             181..2424
                     /locus_tag="WJK78_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7598527.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTPPPAGPSIETTPVNQPAVGAAMRLLRRNTAFHREDGTAIPNSKQAEEELSFKEE
                     DILFLYGSKKDQRKQLEDKIHQRNPNVKIRTSENENGKDSYKFVDAGYVYAKGEDEIK
                     RISNYRQISNRLGYDGFVYYSGEHPSQSLPSAGMVEYSGNWQYMTDAKRRRTGQAVAS
                     EDLGYTTYYGNEIGATSYAARDADDRERHPAKYTVDFYKKTLTGQLIKNQYVQNKSNL
                     NEPKNPLTIYNITAKLDGNRFTGSASVNPDLATNHANKEHLFFHTNADQRLEGGFFGD
                     KGEELAGRFISNDNSVFGVFAGKQKTEAANAADTKPALPSGKHTKILDSLKISVDEAA
                     DKKARPFEVSSMPDFGHPDKLLVEGREISLLKDTQTIVLADGRKKTIRACCDFLNYVK
                     IGRMQTERPAVKPKAQDEEGDEEDAGVDNGEDEEEIAEESEDEVSEDEGEEAEVSEDE
                     SEEDEEIVEEETEEEAEPEEAEETEEESPAESGSGSNAILPAPEAPGRDIDLFLKGIR
                     TAETDIPKTGEARYTGTWEARIGKPIQWDNQADEKAAKAVFTVDFGKKSISGTLTEQN
                     GVKPAFHIENGKIEGNGFYATAHTRDTGINLSGTGSTNPTTFQANGLRVEGGFYGPQA
                     EELGGIIFNNDGKSLGITEGTENKAEAEAEAEAEVEAGVEQLKPEIKPQFGVVFGAKK
                     DNKEVEK"
     gene            2421..5252
                     /gene="lbpA"
                     /locus_tag="WJK78_001625"
                     /gene_synonym="tbpA"
     CDS             2421..5252
                     /gene="lbpA"
                     /locus_tag="WJK78_001625"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ7598528.1"
                     /translation="MNKKHGFQLTLTALAVATAFPSYAVNPETATPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTHDIQSNKTGQFFLVEGENTLK
                     PVAKLAGYGIYLNNQLNRWVKERIEKKQPLSAEEEAMVREAQARHENLSAQAYTGGGR
                     ILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEADKFR
                     DKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVRGIGLKYSRTKFIDEHHRRRRMGLLYR
                     YENEAYSDNWADKVVLSFDKQGVATDNNTLKLNCAVYPSVDKSCRASADKPYSYDSSD
                     RFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAISRPEQLSHNAARISESTG
                     FDDKNQDKYLLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFD
                     FSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQE
                     LFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADH
                     KTQLPDSTGRLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNRI
                     KPKSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAY
                     LAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAES
                     TANRHGGDSNYGRYAAPGRNFSLALEMKF"
BASE COUNT         1576 a         1267 c         1450 g         1176 t
ORIGIN      
        1 atgtaggttc gtgggaatga cgggatgtag gttcgtggga atgacggaat gtatctgtac
       61 tgtctgcggc tcgtcgcctt gtccggattt ttgttaattc actataaaaa cggcttgata
      121 ttatctgtac atattaatat aatgataatt attattaatc aaataggagg aaaagtaggg
      181 atgtgtaaac cgaattatgg cggcattgtc ttgttgccct tacttttagc atcttgtatc
      241 ggcggcaatt tcggcgtgca gcctgttgtc gaatcaacgc cgaccgcgta ccccgtcact
      301 ttcaagtcta aggacgttcc cactcccccc cctgccgggc cttctataga aaccacgccg
      361 gtcaaccagc ccgccgttgg tgcggcaatg cggctgttga gacggaatac tgcttttcat
      421 cgtgaagatg gcacggcaat tccaaatagc aaacaagcag aagaagagct gtcgtttaaa
      481 gaggaagata tcctgttttt atacggttca aaaaaagatc aacgtaagca gcttgaagat
      541 aaaattcatc aacgcaatcc taatgtaaaa attaggacat cagaaaatga aaatggaaaa
      601 gatagttata aatttgtaga tgcaggttat gtatatgcaa agggagaaga tgaaattaag
      661 cggatttcaa attacaggca gatttctaat cgtttaggct atgacggttt tgtatattat
      721 tccggagaac atccttccca atctttaccg agcgcgggaa tggtggaata ttccggtaac
      781 tggcaatata tgaccgatgc caaacgtcgt cggacaggtc aggcggttgc cagtgaggat
      841 ttgggttata ccacatatta tggtaatgag attggtgcaa cttcttatgc ggctagggat
      901 gccgatgacc gagaaaggca tcctgccaaa tatacggttg atttttataa gaaaactttg
      961 acgggtcaat taattaaaaa tcagtatgtg caaaataaaa gtaatctaaa tgagcccaaa
     1021 aacccactga ccatttacaa cattactgca aaattggacg gcaaccgctt taccggcagt
     1081 gccagtgtca atcctgattt agcgacaaac catgccaata aggagcattt gtttttccat
     1141 accaatgctg atcagcggct tgagggcggt tttttcggcg ataaggggga agagcttgcc
     1201 ggacggttta tcagcaacga caacagcgta ttcggcgtat tcgcaggcaa acaaaaaaca
     1261 gaggcagcaa acgcagcaga tacaaaacct gccctgccgt ctggaaaaca caccaaaatc
     1321 ttggattctc taaaaatttc cgttgacgag gcggctgata aaaaagcccg tccgtttgag
     1381 gtttcctcta tgcccgattt tggtcatccc gacaaacttc ttgtcgaagg gcgtgaaatc
     1441 tccttgctca aagatactca aaccatcgtt cttgccgacg gcaggaaaaa gacaatccga
     1501 gcctgctgcg attttctgaa ctatgtgaaa atcggacgga tgcaaaccga acgccccgcc
     1561 gtcaaaccga aggcgcagga tgaagagggg gacgaagagg atgcaggcgt tgataacggc
     1621 gaagacgaag aagaaatcgc cgaagaaagc gaagacgaag tttccgaaga tgaaggcgaa
     1681 gaagccgaag tttccgaaga tgaaagcgaa gaagacgaag aaatcgtcga agaagaaacc
     1741 gaagaagaag ctgaacccga agaagccgaa gaaaccgaag aagaatcgcc ggcagaaagc
     1801 ggcagcggtt caaacgccat cctgcctgcc ccggaagccc ctggcaggga catcgacctt
     1861 ttcctgaaag gtatccgcac ggcggaaacg gatattccga aaactggaga agcacgctat
     1921 accggcactt gggaagcgcg tatcggcaaa cccattcaat gggacaatca ggcggatgaa
     1981 aaagcggcaa aagcagtatt taccgttgat ttcggcaaga aatcgatttc tggaacgctg
     2041 acggagcaaa acggtgtaaa acctgctttc catattgaaa acggcaagat tgagggcaac
     2101 ggtttctacg cgacagcaca cactcgggat accggcatca atctttcggg aactggttcg
     2161 accaacccca caaccttcca agctaatggt cttcgtgtag aaggaggatt ttacggcccg
     2221 caggcggagg aattgggcgg tattattttc aataatgatg ggaaatctct tggtataact
     2281 gaaggtactg aaaataaagc tgaagctgaa gctgaagctg aagctgaagt tgaagctggt
     2341 gttgaacagt taaaacctga aattaaaccc caattcggcg tggtattcgg tgcgaagaaa
     2401 gataataaag aggtggaaaa atgaataaga aacacggttt tcagcttacc ctgaccgcct
     2461 tggctgttgc aaccgccttc ccgtcatatg cggtaaaccc tgaaacggcg acaccagatg
     2521 cggcgcagac ccaatccctg aaagaggtta ccgtccgtgc cgccaaagtg ggacggcgat
     2581 cgaaagaggc gaccggtttg ggcaaaatcg tcaaaacgtc ggaaacgttg aacaaagaac
     2641 aggtactcgg tatccgagat ctgacgcgct acgatccggg cgtggcggtt gtcgaacaag
     2701 gcaacggcgc gagcggcggc tactcgatac gcggcgtgga taaaaaccgt gtggcggttt
     2761 cggttgacgg cgttgcccaa atacaggcgt ttaccgtgca gggatcgttg agtggatacg
     2821 gcggacgcgg cggcagcggt gcaatcaacg aaatcgaata tgaaaacatc agcacggtgg
     2881 aaatcgacaa aggcgccggt tcgtccgatc acggcagtgg cgcactcggc ggcgcggtcg
     2941 ctttccgcac caaagaagcg gcagacctga tttcagacgg caaaagctgg gggatacagg
     3001 caaaaaccgc ctacggcagt aaaaaccgcc aatttatgaa gtcgctcggc gcggggttca
     3061 gcaaagacgg ttgggaaggg ctgctaatcc gtaccgaacg tcaagggcgg gaaacgcgcc
     3121 cgcacggcga tattgcagac ggggtggcat acggcataaa ccgtttggat gcgttccgcc
     3181 agacacacga tattcaaagc aataaaacag ggcaattttt cttagtagag ggcgagaata
     3241 cactcaagcc cgtggcaaaa ttggcgggct acgggatata tttgaacaac cagctcaacc
     3301 gctgggtaaa agaacgtatt gaaaaaaaac agcctttaag tgctgaagaa gaagcgatgg
     3361 tgcgggaggc gcaggcgcgc cacgaaaacc tgtccgccca agcttacacg ggcggcggca
     3421 ggatattgcc cgatccgatg gattaccgca gcggctcttg gcttgccaag ctgggctacc
     3481 gcttcggcgg caggcattat gtcggcggcg tgtttgagga taccaaacag cgttacgaca
     3541 tccgcgatat gacggaaaaa cagtattacg gtacggacga ggcggacaag tttagagaca
     3601 agagcggggt gtacgacggc gacgatttcc gcgacggctt gtattttgtg ccgaatatag
     3661 aagagtggaa gggcgataaa aagttggtca ggggcatagg tttgaaatat tcccgcacca
     3721 aatttattga cgaacatcac cgccgccgcc gtatgggttt gctgtatcgt tatgaaaacg
     3781 aagcgtattc tgacaattgg gcggacaagg tggtgttgtc gtttgacaaa cagggcgtgg
     3841 caaccgacaa caacacgctg aagctgaatt gcgccgtgta tccttccgtg gacaaatcct
     3901 gccgcgcgtc ggcggacaaa ccgtattcct acgacagcag cgaccgtttc cactaccgcg
     3961 aacagcacaa tgttttgaat gcctcgtttg agaaatcgct gaaaaacaaa tggacgaaac
     4021 accatctgac tttgggcttc ggttacgatg cttccaaagc gatctcccgc cccgaacagc
     4081 tttcccacaa tgcggcaagg atttcggaat ccacgggatt cgatgataaa aatcaagata
     4141 agtatctttt gggtaagccc gaagtcgtcg aagggtcggt ctgcggctac atcgaaactt
     4201 tgcgttcccg caaatgcgtg ccaagaaaaa tcaacggcag caatatccac atttctttga
     4261 acgaccgttt ttcaatcggc aaatattttg atttcagctt gggcggcagg tacgaccgga
     4321 aaaacttcac cacgtcggaa gaactcgtcc gcagcgggcg gtatgttgac cgttcgtgga
     4381 acagcggcat cgtgttcaaa ccgaaccggc atttttcttt gtcttaccgc gcctccagcg
     4441 gcttcagaac gccctcattc caagagcttt tcgggataga catttatcac gattatccga
     4501 aaggctggca gcgtcccgcc ctgaaatcgg aaaaggcagc caaccgcgaa atcggtttgc
     4561 agtggaaggg cgatttcggc tttttggaaa tcagcagctt ccgcaaccgc tataccgata
     4621 tgattgccgt tgccgatcac aaaacccaat tgccggattc aacaggacga ttgacagaga
     4681 ttgatatacg cgattattac aatgcccaaa atatgtcgct ccaaggcgtt aatatattgg
     4741 gaaaaatcga ctggaacggc gtgtacggca aactgcccga aggtttgtac accacattgg
     4801 cgtacaaccg tatcaaaccg aaatcggtat ccaaccggcc gggactgtcc ctccgcagct
     4861 atgctttgga tgcggtacag ccgtcgcgtt atgttttggg gttcggatac gaccagcccg
     4921 aggggaaatg gggcgcaaac attatgctga cctattccaa agggaaaaac cctgacgagc
     4981 ttgcttatct ggcaggcgat caaaaacgat attcgacaaa aagagcgtcg tcttcttggt
     5041 cgacggcaga cgtttccgcc tatctgaatc tgaaaaaacg gctgaccttg agggcggcta
     5101 tctacaatat cggcaactac cgctacgtta cttgggaatc cttgcgccag accgcggaaa
     5161 gcacggcaaa ccggcacggc ggcgacagca actatggaag gtatgccgca ccgggcagga
     5221 acttcagcct cgcgctcgaa atgaagtttt aaaggaaata ccgtctgaaa gcttgatctg
     5281 caccccaaaa gtcggactaa accgccaact gattaaggtg caggtttttt tgattcaata
     5341 taaacaagat ttccgtcgtc attcccgcgc aggcgggaat ctagacattc aatgctaagg
     5401 caatttatcg ggaatgactg aaactcgaaa aactggattc ccacttttgt gggaatggcg
     5461 gcagagcgg
//
LOCUS       DAWKOX010000137         5397 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.137, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000137 DAWKOX010000000
VERSION     DAWKOX010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5397
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.137"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(124..200)
                     /locus_tag="WJK78_001626"
     tRNA            complement(124..200)
                     /locus_tag="WJK78_001626"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(164..166),aa:Pro,seq:ggg)
     gene            411..869
                     /gene="nudB"
                     /locus_tag="WJK78_001627"
     CDS             411..869
                     /gene="nudB"
                     /locus_tag="WJK78_001627"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ7598529.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            971..1504
                     /locus_tag="WJK78_001628"
     CDS             971..1504
                     /locus_tag="WJK78_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ7598530.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            1612..1845
                     /locus_tag="WJK78_001629"
     CDS             1612..1845
                     /locus_tag="WJK78_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598531.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            1838..2437
                     /gene="rdgB"
                     /locus_tag="WJK78_001630"
     CDS             1838..2437
                     /gene="rdgB"
                     /locus_tag="WJK78_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ7598532.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAEYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELAGKTDKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHREQALADLIRKLAL"
     gene            2465..3334
                     /gene="galU"
                     /locus_tag="WJK78_001631"
     CDS             2465..3334
                     /gene="galU"
                     /locus_tag="WJK78_001631"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ7598533.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            3353..4729
                     /gene="argH"
                     /locus_tag="WJK78_001632"
     CDS             3353..4729
                     /gene="argH"
                     /locus_tag="WJK78_001632"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ7598534.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIRSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIRREITAELLG
                     FEQICQNSLDAVSDRDFAVEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSKLPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMSA"
     gene            4786..5256
                     /locus_tag="WJK78_001633"
     CDS             4786..5256
                     /locus_tag="WJK78_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HEZ7598535.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGWEQELVLIW
                     RAEADIGNGGILQFVCNWSFPAAEKTCSVLKKIGAIHSAMLIHRAADALDKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
BASE COUNT         1409 a         1653 c         1318 g         1017 t
ORIGIN      
        1 aagataaaga aatgccatct gaacggtttt cggacggcat ttgaatgtct gtcgccgcgt
       61 actctacatc ataatcatac ggacggcaaa aaagccgctt ttgaaagcgg ctttcggaat
      121 ttttggtcgg agtgaaagga ttcgaacctt cgaccccttg caccccatgc aagtgcgcta
      181 ccagactgcg ccacactccg actcgataag tttcggatta tagtttccgc ccgacgcttt
      241 ggcaagcatt aaaatcacaa ccgcccttat ctttttgaca caacggaaaa tttaccggca
      301 aacaccggcg cgtcccatcc gtgcagaaaa aaggatacgg aaaaggataa acgccataac
      361 gtgcggcgtt tgctataatc cgccccttca ttaccgcagc ccgccgaaag atgccgatgg
      421 caaaaccgct caaatacccc gtctccgcac tggtcgtcct ttatagcggg gacggcggca
      481 tcctgctcat cgaacgcacg catccggaag gattttggca gtcggtaacc ggcagcctcg
      541 aaccgggcga aaccgtcgcc caaacggcaa ggcgcgaagt ttgggaagaa accggcatcc
      601 tgctggcgga cgggcagctt caagactggc acgacagcac ggtttacgaa atctaccacc
      661 actggcggca ccgctatcca aaaggcgtgt ttgaaaaccg cgaacacctc ttctctgccg
      721 aaatcccgcg tgatacgccc atcgccctgc aacccgaaga acacgtctcc tacggctggt
      781 tcggcttgga agaagcggcg gaaaaagtgt tttccccgtc caacaggcgc gcgattctgg
      841 aactgggcag gtttttgggc aaacggtaac acgcgcccgt acaccctttc agacggcatc
      901 gggcgcattt tcagccggac gtttgtgcta tactttcaaa cttcaaactt tcccaaacaa
      961 aggaaaccaa atggcagact tcaaccaaat cctgaccccc ggcgatgtgg acggcggcat
     1021 catcaacgtc gtcaacgaaa tccccgccgg cagcaaccac aaaatcgagt ggaaccgcaa
     1081 actggccgca ttccaactcg accgcgtcga acccgccatc ttcgccaaac cgaccaacta
     1141 cggcttcatt ccccaaactt tggacgaaga cggcgacgaa ttggacgtgc tgctcgttac
     1201 cgaacaacct ttggcaaccg gcgtattctt ggaagcgcgc gttatcggcg tgatgaaatt
     1261 cgttgacgac ggcgaagtgg acgacaaaat cgtctgcgtt cctgccgacg accgcaacaa
     1321 cggcaacgcc tacaaaactt tgtccgattt gccgcaacag ctgatcaaac aaatcgagtt
     1381 ccacttcaac cattacaaag acctgaaaaa agcaggtacg accaaagtcg aatcgtgggg
     1441 cgatgcggaa gaagcgaaaa aagtcatcaa agaatccatc gaacgttgga acaaacaggc
     1501 ataacgcccg ccatgccgtc tgaacgccgt ttcagacggc atttttccaa gctctaggga
     1561 ataccgtccc aatcggctat aatccgaaca taccgtttcc gaccgaacgc catgaaccgc
     1621 cgaaaaatct atctgttgtc tgttgccctc ttcacactgg catttatgct gctcgtcctc
     1681 ttgggtgctt atctgctgac cgtcggcagc aaagccttcg ccgtcgcctc ctttcttttc
     1741 gcattcggcg cactgttcgg acaaatcggc agcctcgccc tctacctgcg gcacaaatcc
     1801 ctacgcgccg cccaatccgc cgcaaaggaa aaccgctatg tctgaaaaac cggaaaaaat
     1861 cgttttggca agcggcaatg ccggcaagct cgaagaattc ggcaacttat tcaaacctta
     1921 cagcatcacc gtattgccgc aatccgcatt cggcataccc gaatgccccg aaccctatcc
     1981 cacctttgtc gaaaacgcgc tggcaaaagc acgccatgcc gccgaataca gcgggctgcc
     2041 cgcgcttgcc gacgacagcg gcatctgtgc cgccgcccta aacggcgcgc cgggcatcca
     2101 ttccgcacgt tacgcgggcg acaatcccaa atccgatacc gccaacaacc tgaaacttgc
     2161 cgccgaactt gccggcaaga ccgacaaaag ctgctgctac gtctgcgtat tggtttttgt
     2221 ccgccataaa gacgacccgc gtccaattat cgccgagggc gtatggcacg gacaatggaa
     2281 cggcgttccc gccggtgaaa acggtttcgg ttacgacccg tatttttatc tgcccggaca
     2341 cggcaaaacc gccgccgaat tggattcgga ggtcaaaaac cgcgaaagcc accgcgagca
     2401 ggcactcgcc gatttaatcc gcaaactcgc cctttaaaca tcaaaacaat acaaaggaaa
     2461 aagaatgaaa ccgataaaaa aagccgtctt ccccgtcgca gggatgggaa cacgcttcct
     2521 gcccgccacc aaggcaagcc cgaaagaaat gctgcccatc gtcgacaagc cgctgatcca
     2581 atacgccgta gaagaagccg tggaagccgg ctgcacggaa atggtgtttg ttaccggacg
     2641 caacaaacgc agcatcgaag accatttcga caaggcatac gaactcgaaa ccgagttgga
     2701 aatgcgccat aaagacaaat tgttggaaca cgtccgcaac atcctgccgc cgaacattac
     2761 ctgcctctac atccgtcagg cggaagcact gggcttggga cacgccgtct tgtgcgcccg
     2821 cgccgccatc ggagacgaac cctttgccgt tatccttgcc gacgacctga ttgatgcccc
     2881 caaaggcgcg ctcaaacaaa tggtcgaagt gtacgggcgc agcggcaaca gcattttggg
     2941 cgtagaaacc gttgaagcat cgcaaaccgg ctcatacggc atcgtcgaaa ccgaacagct
     3001 caaacagttc caacgcatta ccggcattgt cgaaaaaccc aagcccgaag acgcgccctc
     3061 caaccttgcc gttgttggac gctacatcct caccccgcgc attttcgact tactgaccgg
     3121 actgccgcgc ggcgcgggca acgaaatcca gcttacagac ggcatcgcca agctgctcga
     3181 tcacgaattt gtcctagcgc acccctttga aggcacgcgc tacgactgcg gcagcaaact
     3241 gggctatctg gaagccaccg tcgcctacgg cctgaaacac cccgaaaccg gcgaaccctt
     3301 ccgccgcctt ttggaaaaat accgtaccga ataaccacat caaggaatcc ttatgcacga
     3361 caaaacctgg tccggacgtt tcaacgaacc cgtttccgaa ctcgtcaaac aatacaccgc
     3421 ctccatcggt ttcgaccgac gccttgccga atgggacatc caaggctcgc ttgcccacgc
     3481 gcaaatgctg aaagaaaccg gcgtgttgga cgaaggcgat ttggcggaca tccgtcgggg
     3541 catggcggaa atcctcgaag aaatccgcag cggcaaaatc gaatggtcgt ccgatttgga
     3601 agatgtccac atgaacatcg aacgccgcct gaccgacaaa atcggcgacg cgggcaaacg
     3661 cctgcacacc ggccgcagcc gcaacgacca agtcgccacc gacatccgcc tttggctgcg
     3721 cgaccagatt accgtcatcc gaagcctgat tcaaagcctt cagacggcat tgctggattt
     3781 ggcggaacaa aacgccgaaa ccgtcatgcc aggctttacc cacctgcaag tcgcccagcc
     3841 cgtcagcttc ggacaccata tgctcgccta cgtcgaaatg ctcggccgcg ataacgaacg
     3901 gatggcggac tgccgccgcc gcgtcaaccg tatgccgctc ggcgcagccg cccttgccgg
     3961 tacgacctac ccgattcggc gcgaaattac cgccgaatta ctgggtttcg agcaaatctg
     4021 ccaaaactcg ctcgatgccg tatccgaccg cgattttgcc gtcgagttca cggctgccgc
     4081 ctcgctggtt atggttcacc tgagccgcct gtctgaagaa ttgattttgt ggatgagtcc
     4141 gcgtttcggc tttatcgaca tcgccgaccg tttctgcaca ggttcgtcca tcatgccgca
     4201 gaagaaaaat cccgacgtgc ccgaactcgt gcgcggcaaa tccggccgag tcatcggaca
     4261 ccttatcggc ttgattaccc tgatgaaatc gcagcccttg gcgtacaaca aagacaatca
     4321 ggaagacaaa gaacccttgt tcgacaccgc cgacacgctt atcgacacgt tgcggattta
     4381 cgccgatatg atgcgcggcg taaccgtcaa acccgacaat atgcgcgccg ccgtgatgca
     4441 gggcttcgct accgccaccg atttggcaga ttacttggta aaaaaaggca tgcctttccg
     4501 cgatgcccac gaagtcgtcg cccaagccgt gcgccacgcc gaccaagcgg gtgtcgattt
     4561 gagcaaactg ccgctcgaag tcttacaagg tttcagcgat ttgattgccg acgacgttta
     4621 cggcgtgctg acacccgaag gcagcttaaa cgcgcgcaac cacttgggcg gtaccgcgcc
     4681 tgaacaagtc cgtttccaag tcaaacgctg gcgggaaatg tcagcttaac ccccgatgcc
     4741 gtctgaagaa atgttcagac ggcattttta aaagacaaga acactatgac cgatacggat
     4801 acccaagccg accgcttcga acagatgatg tggcaggcgg tggacaaact ttttgaacag
     4861 catgacggca aactcgaaag catggacggg tgggaacagg agctggtttt aatttggcgg
     4921 gcagaagccg atatcggcaa cggcggcata ctgcaatttg tctgcaactg gagtttcccc
     4981 gccgccgaaa agacttgttc cgttctgaaa aaaatcggcg cgatacacag cgcaatgctg
     5041 atccatcggg cggcagacgc attggacaaa gaaatccgcc acctccaatc ggaaggtaaa
     5101 aacctgaaag aaatgtggga tataacaaaa catctcgaca acaaaaccgc ctcactgccg
     5161 aacagtctgg atgaacaata ttggcaagac cccgacaaac tgtatctgcc gggatggcaa
     5221 tactattccg gcaaccctgt tcagacgctg ttttaaagag aggggttctc aagcattccg
     5281 acaaatcaaa atgccgcctt tacccacatt ccgccacgca ttgcccgccg cttccgcctt
     5341 acgggcgcga tgcacggaaa aaatacaagt cagaacaaac cataaccgga tcggata
//
LOCUS       DAWKOX010000138         5322 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.138, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000138 DAWKOX010000000
VERSION     DAWKOX010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.138"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            296..1729
                     /locus_tag="WJK78_001634"
     CDS             296..1729
                     /locus_tag="WJK78_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ7598536.1"
                     /translation="MNEYSQLIKHPDISLPPVSDGIKVDNPATGETLAFVRKTDSDKL
                     KNLIQKAAAAQKLWAAKTALERADVLWRWYFLIKENKEALARLMTMEQGKGLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALAVLAYEAGVPQDLLPVVSGSASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGTLASKF
                     RNSGQTCVCTNRVYAQSGIYEEFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALSKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            1838..2626
                     /locus_tag="WJK78_001635"
     CDS             1838..2626
                     /locus_tag="WJK78_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ7598537.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALAYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEEIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            2994..4550
                     /locus_tag="WJK78_001636"
     CDS             2994..4550
                     /locus_tag="WJK78_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ7598538.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADSQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDSTTALGAIELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELAPQLNLPQQQEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4567..5313
                     /gene="surE"
                     /locus_tag="WJK78_001637"
     CDS             4567..5313
                     /gene="surE"
                     /locus_tag="WJK78_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ7598539.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEQALWTLLAHFFKNPPQSPILWNIN
                     IPAVEPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAVFWHAD"
BASE COUNT         1246 a         1340 c         1516 g         1220 t
ORIGIN      
        1 tgtttggatt tttgccatac tctaccacac gttgcaactg caatctttgt tccttatata
       61 ttattaaagg gctgcattac ttttctttct aaattaccat tgtataaaaa gtatttttct
      121 taaacgacag ggattgcgcc cgctccatat tcagacaccg cccggatgtt gcgctgcccg
      181 atcggatgct tcagacggca tcggaagggt ttgcagtttt ggaatatgaa gatgataatg
      241 tccgcgagat tgacggcatt tgaaagcggt tattccgcat accggaggat acgaaatgaa
      301 cgaatattcc caattaatca agcatcccga tatttccctt cccccggttt cagacggcat
      361 caaagtcgat aatccggcaa cgggcgagac tttggcgttt gtccgcaaga cggattcgga
      421 caagctgaaa aacctgattc aaaaggcggc ggcagcgcaa aaattatggg cggcaaaaac
      481 cgcgttggaa cgcgccgatg tgttgtggcg ttggtatttt ttgataaagg aaaacaaaga
      541 agcactggcg cgtctcatga cgatggagca gggcaaaggc ctgaccgagg cgcgcggcga
      601 aatcgattat gcggcttcgt ttgtgcgctg gtttgccgaa gaggcgcggc ggattgacgg
      661 cgatgtgctg acgagtgtga aagcgtcgca aaaactggtc gtgttgaaac agcctgtcgg
      721 tgttaccgcc gcgattacgc cgtggaactt tccgtccgcg atgattgcgc gcaaggctgc
      781 gccagctttg gcagtgggtt gcgcgatgat agtcaaaccc gcgtcgctca cgcctttgag
      841 cgcgtatgcg ttggccgtgt tggcttacga agcgggcgtg ccgcaggatt tgctgcctgt
      901 tgtcagcggc agtgcttcgg aaatcggccg tgaatttgcc acaaatccga ttatccgcaa
      961 aatcagtttc accggctcta ccgaagtcgg cgcgaaaatt tttgccgaca gcgcggcaga
     1021 cattaaaaaa ctcagcttgg aactgggcgg caacgcgccg tttatcgtgt ttgacgatgc
     1081 cgatttggac aaagctgtcg aaggtacact tgccagcaag ttccgtaata gcggtcagac
     1141 ctgcgtctgc accaaccgcg tttacgctca atccggcatt tacgaggaat tttgccgcaa
     1201 attgagtgaa aaagcagccg cgctcaaatt gggcaacggc ttggaggatg gcgtaaacca
     1261 agggccgctg attgaggaaa aagcggtaga aaaagtcgag cagcacatcg ccgacgcgct
     1321 ctcaaaaggc gcggtctgtc tgaccggcgg caaacgcagc gcgttgggcg gaacgttttt
     1381 tgagccgacc gtcttaagcg gtgtaacggc gcaaatggcg gtagctcgcg aggaaacttt
     1441 cgggcctttg tgtccggtat tccgttttga aaccgaagcc gaggtcatcg aggctgcgaa
     1501 caatacggaa tacggtttgg cagcttacct tttcaccgcc gacaccgccc gccaatggcg
     1561 cgtcggcgaa gccttggaat acggcatggt cggcatcaat acgggcttaa tcagcaatga
     1621 agcggcaccg ttcggcggcg tgaaacgcag cggtttggga cgtgaaggca gcaaatacgg
     1681 tgcggacgaa tatctagaat tgaaatattt gtgtatggat gtcgggtgag ggatgccatc
     1741 cgaacggcag ttcgccggac tgtgccgcat tttaagcagt ctctatctgt tgtacaatgc
     1801 gccctgtttt tacggttatt tttgatttga acaagatatg atggaaaacg gaaaaacagt
     1861 cccgagatgg cgttttgcct tgaaaagtgc gggctggcac ctcttaatca gcctatcggt
     1921 tgcaggactg gcggcattgc tggtttttaa ggtttggtat ccttatcctt atgccgagct
     1981 gacgggaggg ctgtcgcttt atcagctggt ggtggctgtc gatatcgtat gcggcccgct
     2041 gctgacttta attttggcaa gcccgaagaa aaagacaaag gcacgcatgg tcgatttttc
     2101 catggtcggc atcatccagc tggcggcttt ggcgtacggt ctgcacagcg tttcgctggc
     2161 gcgtcctgtg gtggaagcgt ttgaacagga tcgtatgacc attgttacgg cggcggaagt
     2221 cgtggtcgaa gatttgcaca aagcccccga agggctgcaa agcctgtcgt ggttcggcat
     2281 ccgccgcatt gcattgaaag aacctgagga tgcggatgag aagaacaaga cgctggattt
     2341 gtccctgaaa ggtatcgagc cgagtatgcg tcccgaccgg tggctgccgt attccgacaa
     2401 ggaagcagaa gaaatccgca aacatctgaa accgctgaaa gtcttggcgg atgcgagaaa
     2461 aacgacggtt gcggacattc tgaaacaggc aggtctcgcc gaaggggagg agctgtatta
     2521 cctgccgttt accagcagca ggcagaaaga gtggatagtc attaccgata aagagggcaa
     2581 caccaaaggc tacgcgccga tagacggctt catcatcacc ccttaagcgt tgggactccg
     2641 tccgcactcg aacatccgtt cttcgcggcg gtagaatcag actgtatttg agagaggcgc
     2701 aacccctcaa tcagggcaac acatagggga aggctttatg tgccgtccgt gtgttgaaac
     2761 atttcaaaat aagctcatgc cgtccgaaca tcctttcaga cggtatggcg ttttgccatt
     2821 gccccgataa gctgttaaac tatttaaatt atttcgaccg aaggtacacg cacatgcaag
     2881 accccgagca gagcagcaag cccgcccgcc gttttttgtg cgtaccgtct gttcaggcag
     2941 cttgagcgct tcaggctgcc ttttcgcgtt tgaacttgag gaatacgaaa atcatggatt
     3001 tcagttggtt ggcagaaccg catacctgga taggttttgc cacgcttttg gtgttggaag
     3061 tcgtattggg gatagacaat cttgtctttg tggcgatttt ggcaaacaag gtccagcccg
     3121 cacggcgcga ccgcgcacgg attatcgggc tggggctggc agtcgtcatc cgcatcatta
     3181 tgcttgcttt tatggcgcac atcatcacgc tgaccgagcc gctgttccaa atcggcggcc
     3241 tcgccgtttc cggcaaggac atgattatgc tcgcgggcgg tattttcctg ctttacaaag
     3301 ccaccaccga actgcatgaa cgcctcgaag ggcacaaccg ttttaccgtt gccgacagcc
     3361 aaaaaaaaca cgcgccgttt tggggcgtgg tcgcgcaaat cctgatactg gatgccgtgt
     3421 tttccatcga ttcggtcatt actgcggtgg cgatggtcga tcatatcgtc gtggcgatgg
     3481 gtgcggtcgt cgtcgcaatg gctgtaatga tttctgccag caaactcttg accgaatttg
     3541 tcgacagaca ccctaccgtc gtgatgctct gccttggttt tttgttgatg atcggtttca
     3601 gcctgattgc cgaagccttc catttccaca ttcccaaagg ctacctctac gccgccatcg
     3661 gcttctcgat tttaatcgaa ctgtttaacc agatttccca gcgcaacagc cgcaaaaacg
     3721 actacatcgg cagctcgtgg cgcaaacgga ctgctgaaaa tgtcttgggt atgatgggca
     3781 tacgcgaaag cgtgcttgcc gatgcgggcg gcgaatctgg ggacgacgcg cattttgaag
     3841 aaaacgaaaa atcgatgata cgcagtgtgc tgacgcttgc cgaacgcccg attatggggg
     3901 tgatgatccc acgccgcgac atcgaacggc tggacatttc ccaaagccgc gaagaacagt
     3961 atgcccaact gcaaaacacg ccttacagcc gcctgctcgt tgtcggaaag gcgggcgtgg
     4021 acgaaccttt gggctacatc aacaaaaaag acctgctgtc ccaactgctg gaaacaggcg
     4081 gtctcgacat tcagacggca ttgcgccagc cgctcgtttt gcccgacagc actaccgcgc
     4141 tgggcgcaat cgaactcttc cgccaaagca gcgcggatta tgctttggtg gtggacgagt
     4201 tcggcgcggt attgggcatg gtaaccatga aagacctgct cgaaaccatc gcaggcgagt
     4261 tccccgaaga atttgagcgc gaagaagaac cagccgttca ggggaatccc gatgaaagcc
     4321 tgacggtgga aggcgcgttg gaatatgtgg aactcgcacc gcaactcaac ctgccgcagc
     4381 agcaggaaga tgccgatttc catacggttg ccgggctgat tatggaagaa ttgcaaacca
     4441 tccccgatgt cggcgatttt gccgatttcc acggctggcg gtttgaagtg gtcgaaaaag
     4501 aagggcagcg catcgagcgg gtcaaaatca ccaaattgcc cgaagaataa gcattcagga
     4561 tagaaaatga acgttttgat ttccaacgac gacggctacc tctccgaagg tattgccgtt
     4621 ttggcgcgcg ttacggcgga atttgccaac gtcagggtgg ttgcgcccga acgcgacagg
     4681 agcggggtca gcaattcgct gacgctggaa cgccctttgc agttgaaaca ggcgcaaaac
     4741 gggttctact atgtcaacgg cacgccgacc gactgtatcc acatcgggca gtctgtattt
     4801 tcggattttc aggccgattt tgtcttttcg ggcatcaacc ggggcgcgaa tatgggggac
     4861 gacacgcttt attcggggac ggttgcggcg gcaaccgaag cctaccttat gggcataccc
     4921 gctgtggcgt tttccttaaa cgacgcttcc ggacgctatt gggcgaccgc agaacaggca
     4981 ctgtggacat tgttggcgca ttttttcaaa aaccccccgc agtcccctat tttgtggaac
     5041 atcaatatcc ccgccgtcga gccggaagat gtgcggggca ttaaaatcgc ccgtttgggc
     5101 aggaggcatc acggtcagaa cgtcatcccc gcgcgcaatc cgcgcggcga acagatttat
     5161 tggataggcc cggtaggcag ggtttccgac aaagaagagg gaacggattt cggtgaatgc
     5221 ggcgcaggtt tcattaccgt aacgccgctg caaatcgacc tgaccgccta tccggacatg
     5281 gcggaaacag cggtgttctg gcatgcggac tgaccgtttc at
//
LOCUS       DAWKOX010000139         5312 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.139, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000139 DAWKOX010000000
VERSION     DAWKOX010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5312
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.139"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(234..2978)
                     /gene="tbpA"
                     /locus_tag="WJK78_001638"
     CDS             complement(234..2978)
                     /gene="tbpA"
                     /locus_tag="WJK78_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ7598540.1"
                     /translation="MQQQHLFRLNILCLSLMTALPVYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKSVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEAAGRGVQSFNRLVPVEDDNQYAHFVVEEECKSGYETCKANPK
                     KDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHTQ
                     QTFDTRDMTVSAFLTKAVFDENKKQAGSLSGNGKYAGDHKYGGLFTNGENGALVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGSN
                     LRHQDYYFQNAKRAYSLKTPPKNGNKNISPNGSTSTPYWVSIGGGNVVTGQICLFGNN
                     TYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTLS
                     WNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGDKIKAVKIDPEKSFNKEAGIV
                     FKGDFGNLEASWFNNAYRDLIVRGYEAQIQNGKETAKGDPAYLNAQSARITGINILGK
                     IDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGYDQ
                     PEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTIK
                     KHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEMKF
                     "
     gene            complement(3065..5161)
                     /locus_tag="WJK78_001639"
     CDS             complement(3065..5161)
                     /locus_tag="WJK78_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7598541.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGGSFDLDSVDTEAPRPAPK
                     YQDVSSEKPQAQKDQGGYGFAMRFKRRNWYQKANPKEDEIKLSENDWEQTDNGDIKNP
                     SKQKNIINALPGNNGGASLQDSSQENQGISKVTDYHNFQYVWSGFFYKQIKNTIEKNG
                     SSITAARNGPDGYIFYKGKNPSRQLPVLGQVTYKGTWDFLTDVKINQKFIDLGNTSTK
                     PGDRYSAFSGELDYIVNKDSDKKDGHVGLGLTTEITVDFEKKTLSGKLIKNNSVSNND
                     ANAKYTTQYYSLDAQITGNRFNGKATATDKPGNGETKQHPFVSDSSSLSGGFFGPKGE
                     ELGFRFLSDDQKVAVVGSAKTKDNTANGNTEAASGGTGAAASGGAADMPSENSKLTTV
                     LDAVELTHGGTAIKNLDNFSNAAQLVVDGIMIPLLPKDSESGNTNQGTNGGTAFTRKF
                     DYTPKSDEKDTQAGTPTNGAQTASGTEGVNGGQAGTKTYAVEVCCSNLNYLKYGLLTR
                     KTAGNTGEGGNGSQTAAAQTDAQSMFLQGERTDENKIPSEQNVVYRGSWYGHIANGTS
                     WSGNASDKEGGNRAEFTVNFADKKLDGTLTAGERTSPTFTITATIQGNGFEGTAKTGD
                     GGFALDPKNTEASHKASINATVTGGFYGPKAEELGGWFAYPGDSQAQPSASGSGTSAA
                     NSATVVFGAKRQQLVQ"
BASE COUNT         1107 a         1359 c         1339 g         1507 t
ORIGIN      
        1 gggaatgacg ggatttgagg tttctgtttt tgattttctg ttttcgtagg aatgacggtt
       61 tagagttacc cgaaacctca aaaaaaaccg aaaccgaacg gtctggattc ccgcctgcgc
      121 ggaaatgacg ggtttcaaga ttacggtatt atcgaggatg atggaaaaca gtggggattg
      181 tgtaaaaaat gccgtctgaa gcctttcaga cggcatttgc ggcgtttgga cgtttaaaac
      241 ttcatttcca agctaaatgt gtagtttcgg ccgggggcgg catatcggtt gtaaacgccg
      301 acatttttgt gttgattgac tgcgccgccg gcagtttgcc gcacattttc ccaagtaaca
      361 tagcggtagt tgaggaggtt gtacacgccc gcacggaggg tgaagtgttt tttaatcgtg
      421 taataaccgg acacatccac aatataccaa gggcgggtac ggcgtgcggt ggcttttgta
      481 ttgcggctgt tgccgttgag caaagcccgg ctgcccaaca actctgtgat ttccttggct
      541 ttggaataag tcagcatacc gttcacaccc catttgcctt ccggttggtc atagcccaag
      601 ccgacgacat agcgcgaagg ttggatggca tcaaacagat gtgattgaat atcggtgcgg
      661 tctgcgcgtt ttttgatgtc gcggacacgg acacgattat aggcaaatgt agaataccaa
      721 ccttcgggca atttatccca tacgccgttc caatcgattt tgcccaaaat attgatgccg
      781 gtaatccgcg cgctttgggc attgaggtaa gccgggtcgc ctttggctgt ttctttgccg
      841 ttttgaattt gcgcttcata accccggaca atcaaatcgc ggtaggcatt gttgaaccaa
      901 cttgcctcca agttgccgaa atcgccttta aacacgatgc cggcttcttt gttgaacgat
      961 ttttccggat cgattttgac ggcttttatt ttatcgcccg cccgccagcc gtacatttcc
     1021 gcaaacgagg gcaggcggaa gccggttgaa gtgcggtaag tcaaatccag ccagtcggca
     1081 ggtttgagga cgatgcctgc gttccaggac agggtgcggt gcgtgccggt ggaaacgctg
     1141 ccgtcgtccg aatgcgtgct gcggtagtcg tagcgcaagc ccgcgccgac atccgcccac
     1201 ctgcccaaac ggacattgtc ccgaactgcc gcgtaatagc ttttgccgtt gatgctgcgc
     1261 ggcgtgcagt ccgtataagt attgttgcca aagaggcaga tttgccccgt aaccacattt
     1321 cccccgccta tgctgaccca atagggagtg cttgtgctgc cgttggggct gatgttttta
     1381 ttgccgtttt tagggggcgt tttcaacgaa taggcgcgtt tggcattttg aaaataataa
     1441 tcctgatggc ggagattaga gccaaagcgg tcaaatccga gattcacgct caggttgtgg
     1501 cggattttgg cggtatcgaa ggattttttg aatgccgcct gcaagagcct gtggctttcc
     1561 ccgtaaatca cgcggtcgga tttgtaatag gaaaacggct tgtcggcact cgggcggcaa
     1621 tatttgtccg aaccgtcggc agaacagtgc gtctgctgaa aatgattgtc caaaccgata
     1681 ccctgccggt cgtaagagag gcgggcataa tccgcccaag tgtctttatc ggcattggta
     1741 tagacatatt ccaaaccgta gcggcttttg gtgtgcgtct cgtcgtaaaa cacgcccgta
     1801 ccgtattccg cgcccaccag cgcaccgttt tcgccgttgg taaacagtcc gccgtatttg
     1861 tggtcgcccg cgtatttgcc gttgccggac aaagaacccg cctgtttttt attttcatca
     1921 aaaaccgcct tggtcaggaa tgccgaaacc gtcatatcgc gcgtgtcgaa agtttgttgc
     1981 gtgtgttcga gtatgccgcc gatgtagtgc cgtttgtttt caaaacgaaa acccgggcgg
     2041 aacagccacg atcggctttc atatgaaagc gggtcggcga ggaagcggtt tggacccgtg
     2101 tagtctcggg tagaaaccgt ttgacgttcg tctttgccga caacatcttt tttcggattc
     2161 gctttacacg tttcataccc gcttttgcat tcttcttcga ccacgaaatg agcgtattgg
     2221 ttgtcgtcct caaccggcac cagcctgttg aagctctgaa cgccgcgtcc ggcggcttcg
     2281 tgggcgcgga tttcccccgc gcgccgaccg gtgtggatca gcaaagcctc cgcaccgccg
     2341 atgcgccccg ccagcgcgat ggattgggta agccctcggt ttttaccgga ataggcggtt
     2401 ttactctgaa tcccccactg cctgccttcc ccgataacat cgtcggcggt tttggtttga
     2461 aatgcgaccg aacctgccaa tgcgccgctg ccttgttcga ccgagtttga gcctttgctg
     2521 atttcgacag atttgacgtt ttcatactcg atttcattga ttgcgccgct gctgcccgcc
     2581 gtcctcgtcc cgcccaatgc cgcctgcgcg gtgtaggact gtatttgcgc caagccgtct
     2641 accgtcaagg aaacgcggtt tttgtccata ccgcgtatcg agtagcccga gcttgcgccg
     2701 cgcccctgtt cgacgacggc gatgccgggg tcgtaacgcg tcaggtcgcg gatatcgagt
     2761 acctgttcct tgctgagggt gtcggcggtt ttgaccaatt tgcccaaacc ggttacttcg
     2821 ttatcgcggc gggttttctg ttttttggct tttacctgta tggtatccaa ctgtttttcc
     2881 tgtgcttgtc cggcttgcac attttctgca taaacgggca gcgcggtcat taaagacagg
     2941 cataaaatat ttaatcggaa caaatgttgc tgttgcatag tgtttcccta ctcttcgctt
     3001 tcagacggca tcggaaggag cgatgccgtc tgaagcctta ttctcgattg ttcggcagcc
     3061 gtgcttattg cacaagctgt tggcgtttcg caccgaatac cacggtcgcg ctgttggcgg
     3121 ctgacgtacc tgaccccgaa gcggacggct gcgcctgact gtcgcccgga taggcaaacc
     3181 atccgcccaa ctcttcggct ttgggcccgt aaaaaccgcc ggttacagtg gcattgatgc
     3241 tcgctttatg ggaggcttcc gtatttttcg gatccagcgc aaagccgcca tcaccagttt
     3301 tcgccgtacc ttcaaatccg ttgccctgaa tcgtggcggt aatggtaaac gtgggagacg
     3361 tacgctcccc agccgtcagc gttccgtcga gttttttatc ggcaaaattc acagtaaatt
     3421 ccgccctgtt gccgccctct ttatctgaag cattgccgct ccagcttgtg ccgttggcaa
     3481 tatgcccgta ccaagacccc cgataaacga cgttttgctc gcttggaatc ttgttttcat
     3541 cggtgcgctc gccttgtaag aacatactct gcgcgtccgt ttgggcggcg gcggtttggc
     3601 tgccgttgcc gccttccccc gtattgccgg cagttttgcg cgtcagcaac ccgtatttca
     3661 gataattgag gttggaacag cagacttcga ctgcataggt ttttgttcct gcctgcccgc
     3721 cgttaacgcc ctcagtaccc gaagcagttt gcgccccatt cgtcggcgta cctgcttggg
     3781 tgtctttttc atcgcttttc ggcgtgtaat caaatttgcg ggtaaaggct gttccgccgt
     3841 ttgtaccttg attggtattc ccgctttcgg aatccttggg caggagcgga atcataatgc
     3901 cgtcgacaac cagttgggcg gcgttgctga agttgtcgag atttttgatt gctgtgccgc
     3961 cgtgcgtcag ctcgaccgca tccaaaaccg tggtcagctt actgttttca gacggcatat
     4021 ctgccgcacc gcccgatgct gccgcacctg tgccgcctga agccgcctca gtattgccat
     4081 ttgcggtgtt gtctttggtt ttcgcgctgc cgacaacggc aactttttga tcgtcgctca
     4141 aaaagcggaa acccaattcc tcacccttcg ggccaaaaaa gccgccgctc aaagaagacg
     4201 agtcggaaac aaaaggatgt tgtttggttt cgccgttgcc gggtttgtcg gttgccgttg
     4261 ccttgccgtt gaagcggttg cctgttattt gggcatcaag gctgtagtat tgggtggtgt
     4321 atttagcgtt agcatcatta ttgcttacac tgttgttttt aattaatttt ccgctgaggg
     4381 tttttttctc aaaatcaacc gttatttccg ttgttaatcc caaacctacg tgcccgtctt
     4441 tcttatcgct atctttattg acgatataat ccaactcccc ggaaaaagca ctatatcggt
     4501 cgccgggttt cgtagaagta ttccctaaat ctataaattt ctgatttatt ttcacatcag
     4561 ttaagaaatc ccaagtccct ttatacgtaa cctgtcccaa tacagggagt tgtctcgagg
     4621 gatttttgcc tttataaaaa atataaccgt caggaccgtt tctggctgcg gttatagatg
     4681 agccgttttt ttcaattgta tttttaatct gtttataaaa aaaacccgac catacgtatt
     4741 ggaaattgtg atagtccgta accttagata taccctgatt ttcttgactg gaatcttgca
     4801 atgatgctcc tccattattt ccaggtaagg cattaataat atttttttgt ttggaagggt
     4861 ttttgatatc accattatct gtttgttccc aatcattttc agagagtttt atctcatctt
     4921 ctttaggatt cgccttctga taccaattcc tccgcttgaa gcgcatcgca aaaccgtatc
     4981 cgccttggtc tttttgggct tgcggttttt cggaagaaac atcttgatac tttggcgcgg
     5041 gacgcggggc ttcggtatcg acagaatcaa gatcgaagct gccgccgcct ccgcccagac
     5101 aagcactcaa caaaaacacc ggcagcacca tagcagcctg atttaccaat ggattgttca
     5161 tataaaccta attcaattaa agaatgataa agattattat tttatttatt tttaataaat
     5221 ttgcaaatgc ttttttattt ttttagggaa tacaccaaaa tcccgtcatt cccgcgcagt
     5281 cgtgaatccg aacgcgtccg cacggaaacc ta
//
LOCUS       DAWKOX010000140         5264 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.140, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000140 DAWKOX010000000
VERSION     DAWKOX010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5264
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.140"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            113..808
                     /gene="pgl"
                     /locus_tag="WJK78_001640"
     CDS             113..808
                     /gene="pgl"
                     /locus_tag="WJK78_001640"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ7598542.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            789..1775
                     /locus_tag="WJK78_001641"
     CDS             789..1775
                     /locus_tag="WJK78_001641"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ7598543.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1825..2673
                     /gene="hexR"
                     /locus_tag="WJK78_001642"
     CDS             1825..2673
                     /gene="hexR"
                     /locus_tag="WJK78_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ7598544.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2794..4440
                     /gene="pgi"
                     /locus_tag="WJK78_001643"
     CDS             2794..4440
                     /gene="pgi"
                     /locus_tag="WJK78_001643"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ7598545.1"
                     /translation="MKHFHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGSQKHDSSTERLINLYLQTNRK"
     gene            4454..5005
                     /locus_tag="WJK78_001644"
     CDS             4454..5005
                     /locus_tag="WJK78_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ7598546.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQLWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKVSELACKTVETEARLEELY
                     NRKKALIDEMVREADKKELPKRL"
BASE COUNT         1341 a         1465 c         1393 g         1065 t
ORIGIN      
        1 aaagcagtcc cgatatttgg tatcaaaagc ataaacaact gttcgaccgg catattgctc
       61 aacccgtttc cataacggaa tatgccgtct gaaataaaaa aaggacacaa atatgtttgt
      121 ttggcacgaa tacgaaaatg cggcagaagc ggcgcagtct ttggctgacg cagtggcgga
      181 tgctttgcag ggcgcactgg acgagaaggg cggtgcggtg ttggcagttt ccggcggacg
      241 ttcgccgatt gcatttttca acgccctgtc gcaaaaagat ttggattgga aaaacgtcgg
      301 catcaccttg gcagatgaac gcatcgtgcc gaccgtccac gccgacagca ataccggttt
      361 ggtgcgcgaa tacctgttga agaacaaagc ggaagcggca atgtggattc ctatggtgga
      421 agacggaaaa actgaaaccg aattacatcc cgatgctgtt gtcgattatg cactgaaaca
      481 ttacaaacag cccgatgttt tggttttggg tatgggaaac gacgggcata cggcttcgat
      541 tttcccgaaa gctccgcagt ttcagacggc aatcgacggt tcggcaggtg tcgcgctggt
      601 gcataccacg cccgttaccg cgccgcacga gcgcgtcagt atgaccttgg atgcgattgc
      661 ccatacgggg catgtgtttt tggcgatacg gggcgaagag aaaaaagccg tgttcgacca
      721 agccgcacaa ggcgaaaacc gcgaatatcc gatcaacctc gttttgaacc atcaaggagt
      781 gaactgccat gtcttctacg ccgaataaac aagccggata tccccgactg gtcgccgata
      841 tcggcgggac gaatgcacgc tttgcgctgg aaaccgcgcc gcgcgtcatt gaaaaagccg
      901 ccgtgcttcc gtgtaaagac tacgatacgg ttaccgatgc ggtgcgtgcc tatctgaatc
      961 aaagcggtgc aacagccgta cggcacgcgg catttgccat cgccaacccg attttgggcg
     1021 actgggtgca gatgaccaac caccattggg cgttttccat cgaaaccacc cgtcagactt
     1081 tggggctgga caccctcatc cttttgaacg actttaccgc gcaggcattg gcggtaacgc
     1141 agacttcaag caaagacctg atgcaggtag gcgggcaaaa gcctgtcgaa tttgccccca
     1201 aagccgttat cggccccggt accggcctgg gcgtgagcgg attggtgcac agccacgcag
     1261 gctgggtggc tttggcgggc gagggcgggc ataccagttt cccgccgttt gacgatatgg
     1321 aagtgctgat ttggcagtac gccaaaaaca aatacggcca tgtttccgcc gaacgctttt
     1381 tgagcggcgc gggcttgagc ttggtttacg aggctttggc tgcaaaacag aaagccaaac
     1441 ccgccaaact gatgccgtct gaaatcacgg aaaaggcttt gagcggcgcg tcgcctttgt
     1501 gccgtcagac tttggacatc ttctgcgcca tgctcggcac ggttgcttcc aacctcgccc
     1561 tgacgctggg cgcgcgcggc ggcgtgtacc tgtgtggcgg cattattccc cgcgtgttgg
     1621 aatatttcaa aacttccccg ttccgcagcc gtttcgagaa caagggcagg tttgaagcat
     1681 atcttgccgc gattcccgtg tatgtcgtct tgagcgagtt tcccggaatt tctggtgcgg
     1741 ctgcggctct cgacaaccat ttgagaaacg tttaaccaca gcggctcctt gcagcggggc
     1801 tgcattatcg aagggcatat cattatgtta agcaaaatca gcgaatcact ggcaaacctt
     1861 tccggtgcgg aacgcaaagt cgccgaatgt gcattggcgg aacccaaatg gttcgtccat
     1921 gccgccgttg ccgaaattgc cgaacgtgcg tccgtcagcc agccgaccgt catccgattc
     1981 tgccgcagct tgggttataa agggctgccc gagttcaagc tcgcgttgtc cgccagcatc
     2041 ggtcatgagg gtatgcccta tgtccatgaa gaactcaacg ccgacgacga tatggcaagc
     2101 gtggtcgaga aagtgttggg caatgccgcc gcctcgctgt tgggcgaacg ccgcttcctg
     2161 aaagagtcgg agctggaaaa cgccattgcc acgctgatgc acgcccgccg cgtcgagttt
     2221 tacggtgtcg gcaattccgg tatcgttgcg caggacgcgc aacacaagtt tttccgtttc
     2281 ggaatgtcca cggtcgccta tgtcgatacg cacacgcagc tgatggcagc atccgttttg
     2341 agcgatcagg atgttttggt tgccatttcc aacacgggtt cgtctatcga acttttggat
     2401 gcggtcagca tcgccaaaga aaacggcgcg tccgtcatcg cactgacccg caacgattcg
     2461 cctctggcgc aacttgccga ctgcgtgttg agcgttgcca cacaggaaaa tgccgaactc
     2521 tacacgccca tggtttcccg cctcttgcag cttgccgtca tcgacattct cgccatcgga
     2581 cttgccctgc gcttgggcga tgctgccagc ctgcaattgc agaaaagcaa aaaaagcata
     2641 cacaacaagc acatcgatta cgacaaagat tgaccttcag acggcatccc acaaatgccg
     2701 tctgaaatgc cgaacaacgg ccgtcggcgg cttgcggcag tttccagcag ccttttcatc
     2761 ccacaacaaa aaacctcatt caggagcata tagatgaaac actttcacga cttacccgca
     2821 tggtcgaaat tgtggaacca ctttgacgac agcaaaacat tgcatatgcg cgaaatgttc
     2881 gagcaagacc cgcagcgtgc ggaacgctac tggctgcaag tcggcggact gacgctggac
     2941 tactccaaaa accgcatcaa cgacgaaacc atgtcgcttt tgttcgagct tgcccgagaa
     3001 gcaggcgtgc cggagcggat gcggcagatg ttccacggcg aaaaaatcaa taccaccgaa
     3061 aaccgcgccg tcctgcatgt cgcccttcgc aaccgcacca attcgccgat tgtggttgac
     3121 ggtgaagatg tgatgcccaa agtcaaccgc gttttgcaac gtatgggcga atttgcacac
     3181 gaagtccgca gcggaagctg gctgggctat accaaccaag tcattaccga cgttgtcaac
     3241 atcggcatcg gcggatcgga tttgggcccg ctgatgatgt gtaccgcgct caaacctttc
     3301 ggtcatccgc gcctcaatat gcacttcgtc tccaacgtgg acggctccca actgcgcgac
     3361 gtattgtcca aagtccaccc cgaaaccacg ctgttcatca tcgcctccaa aacatttacc
     3421 acgcaggaaa cgctgaccaa cgcgctgacc gcgcgcgaat ggtttttgaa tcatgcgggc
     3481 gacgaagaag ccgttgccaa acacttcgcc gccgtttcca ccaatcaaaa agccgtcgcc
     3541 gaattcggca tcgacaccgc caatatgttt gaattttggg attgggtcgg cggtcggtac
     3601 agcctgtggt ccgccatcgg attgccgatt atgctgtatc tcggcgaaga aaacttcatt
     3661 gaaatgctca acggcgcgca cctgatggac caacacttca tcaacacacc gctcgagcgc
     3721 aacctgcccg tcattctcgc cctcatcggc atctggtata tcaactacta cggcggcggc
     3781 agccacgtca tcgcgcctta cgaccaacat ttgcaccgcc tgcccaaatt catccagcag
     3841 ctcgatatgg aaagtaacgg caaacaggtt acgttggacg gcaaagcagt cggacacgaa
     3901 acctcgccga ttatctgggg cgaaacgggc attaacggcc agcacgcctt cttccaactg
     3961 ctgcaccaag gcacgcacat tacccccatc gacctgattg cctcgcttga aaaacgcagc
     4021 aacctgcccg gacaccacga aatcctgctt gccaacgtct tcgcccaagc agaagccttt
     4081 atgcgcggca aaacccccga cgaagtccgc gccgaactca aagcgcaggg tatggatgag
     4141 gcgcgcatcg aagagctggt cccgcacaaa accttctccg gtaaccgccc gaccaacctc
     4201 atcctgatgg acaaggtcaa cccgcgtaat atgggcagcc tgattgccat gtacgaacac
     4261 aaaaccttcg tacaaggcat catttggggc atcaacagct tcgaccagtg gggcgtggaa
     4321 ctcggcaaac aactggctaa aaccattttg ggcgaactga ccggcgaaac cgggtcgcaa
     4381 aagcacgaca gctcgaccga acgcctgatc aacctctacc tgcagaccaa ccgcaaataa
     4441 aacctgcgga aaaatgccgt ctgaacgccg accgtttcaa acggcatttt tatcgaacag
     4501 gaaaaccgtc ggtaaacttg cagagcgtgt gcaatcccga tatgatggtt tgcataaatt
     4561 taaacatata tgttccgcag ctatggcact gattaaagag ccgttggaca aagcgaaaca
     4621 aaggaacgaa gaacttgaag cggcagaaga agcggcggcg caggaggcat tgggtcggga
     4681 gcaggaagtc gaccgcgtat ccgaatggga agaacgctac aagctgtcgc gcagcgagtt
     4741 cgagcagctc tggaaaggat tgcctcaaac cgtacagaat aagctgcaag cctcacagaa
     4801 aacatggaaa agcggtatgg acaaaatctg tgccaacaat gcgaaagccg aaggtgaaac
     4861 gccaaacggc ataaaagtca gcgaactggc atgcaaaacg gtggaaaccg aagcacgctt
     4921 ggaagagctg tacaaccgta aaaaagccct tatcgacgaa atggtcaggg aagcggacaa
     4981 gaaagaactg ccaaagcggc tctgaacagc gcggttcagg cactgcccgc cgatattgcc
     5041 gaaaccgtca tgcccgagta ccgcaactga caaaacggtt tgaatgccaa atgcgccgac
     5101 ggcgacgaat acggcgtggc acaatctgac tgccgtacca gagaaatcaa tgcgaaaacc
     5161 aaagaaatcc aaggttatct gattgactga aacttggatg cgggaatgtc ggcggctttt
     5221 gcgtttttgt cgtttttata gtgaattaaa tttaaaccga taca
//
LOCUS       DAWKOX010000141         5219 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.141, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000141 DAWKOX010000000
VERSION     DAWKOX010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5219)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5219)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.141"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(85..501)
                     /gene="dksA"
                     /locus_tag="WJK78_001645"
     CDS             complement(85..501)
                     /gene="dksA"
                     /locus_tag="WJK78_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ7598547.1"
                     /translation="MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(648..1439)
                     /locus_tag="WJK78_001646"
     CDS             complement(648..1439)
                     /locus_tag="WJK78_001646"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ7598548.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRERLQKEL
                     GVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLPVDTLSRYLGG
                     TRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVTLAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1488..1898)
                     /locus_tag="WJK78_001647"
     CDS             complement(1488..1898)
                     /locus_tag="WJK78_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ7598549.1"
                     /translation="MEIRTIKYTAMAALLAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPPSLEGYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRRR
                     DGKPLIDETFKQEGFDCLKKQGLRRNGLSERVRW"
     gene            complement(1898..2584)
                     /locus_tag="WJK78_001648"
     CDS             complement(1898..2584)
                     /locus_tag="WJK78_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ7598550.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGRKPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVALAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNTAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2704..3747
                     /locus_tag="WJK78_001649"
     CDS             2704..3747
                     /locus_tag="WJK78_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ7598551.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3910..5136
                     /locus_tag="WJK78_001650"
     CDS             3910..5136
                     /locus_tag="WJK78_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ7598552.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVHSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
BASE COUNT         1287 a         1632 c         1179 g         1121 t
ORIGIN      
        1 ttcctccccc tcctctgact ggtgcgcctt tgtgaatatg ccgtctgaaa ctcggggctt
       61 cagacggcat tttgtttgcc gccatcagtc ggcaaactgt tttttcatcc tctctcggcg
      121 ttcttgggac tcaacagata aagtggctgt cgggcgtgcc agcagccgct tcagaccgat
      181 aggctctccc gtatcggcac agaatccata atccccttca tcaatattgc ggatggtcgc
      241 ctgtatttta ctgagaagtt ttcgttcccg atcgcgggta cggagttcca atgcgtactc
      301 ttcttcctgt gtggcacggt cggcaggatc gggggctgat tcgtgttctt ggagatgccc
      361 tgtcgtagcg gaagcatttt cgatgagttc gtcttgcatt tttaccagca attcgcggaa
      421 aaaagccaaa tggtcgtcat tcatataatc gtcttccggc ccgctccaat tcaaaatatc
      481 ttgttctgtc agctttgcca taatgtatat cctctcggtt caccgaaaaa aacaaagcac
      541 cacaaagtgg ctttattcct ttgattttta taaggcttat tgcctaaggc gtttttgaaa
      601 acgcgcatca taacacgttt tggattggtt tttttatttt ctttacatta ttgatattgc
      661 cgttccattt cctgcgaacg gcgcacacag gcacaaacgc cctcacttat ggcttcggcg
      721 acacgatgcc gcctgaaggc ttccacggct tcgtgggttg tcccgccttt tgacgttaca
      781 tttttttgaa gcttctcgaa atcttcaccc gtctgctcgg caagggtaac cgctccttta
      841 aacgttgcca gactgagcgc gcgtgcttct gccatatcaa acccttgtcg gatggcggca
      901 ttttgcaatg cgtccagcag ataaaacaca tatgccggcc cgctgccgct gataccggta
      961 atgctgtgca tttgcgcttc atcttccaac caaacagtca aaccgactga tttcatgatt
     1021 cgatcggcaa tcctgcggtc tgtttccgat acttccgctt cggcatacat accggatacg
     1081 cccagcccga tttttccggg tgtattcggc ataacccgga caatgcggcg tgttcccccg
     1141 aggtaacggc tgagcgtatc gaccggcaat ccggctgcga cagaaagcac caatgcgccg
     1201 ttggtgcgga tatttttgca cgcggcttcc atatcctgcg gcttgacggc aaggattaaa
     1261 acatcgtcgg aatgaagctc cggcaaggtt tcagaagttt cgacccccaa ctctttttgc
     1321 aaacgttcgc gcttttccgc accccggttg gcaatatgga tgcggtaacc gccttgtttg
     1381 accaatccgc ccgcaacggc agccgccata ttgccgccgc cgagaaaata aacattcatt
     1441 atttctaccc tattcaaaat tacctgacta aattcattcc caatttttta ccatcggacg
     1501 cgctcggaca gaccgttgcg ccgcaacccc tgctttttca aacaatcaaa accttcctgt
     1561 ttgaacgtct catcaatcaa aggtttgccg tcacgcctac gccaatccaa cccgcaggct
     1621 tcaaacttcc ctattttcct gtaaaagtaa gattgttgtg cggattcata ttcgtttgcc
     1681 ctgacggaac gattgccgtc tgaaagcggt atctcgtagc cctctaaaga cggcggactc
     1741 tcgccgccaa tatcccaaaa atcgatggcg gcaggttttc tcggcttaca ccagccggac
     1801 agggacgaac actcatacca acctgccaac cggcagcctg caaccgtaaa tgcaagcaac
     1861 gcagccattg ccgtatattt tattgtccga atttccatca gccccttttc ccgaaaatcg
     1921 cgctgccgat acggacgtgt gtcgcaccgc actcaatggc ggcaggcata tcgtccgaca
     1981 tccccataga cagcacgtca gccttaacgc cagccgtatt gaggtcggca agcagtttcc
     2041 gcatcgtttg aaattgcacc ttcaactccg tttcactgct gttggctttg gcaacacaca
     2101 tcagtccgcg tacgacgata ttcggcagct tcgccacttc cacagcaagc gcgactgctt
     2161 cttcgggcgc gacaccgtgc ttcaccgcct cgcccgcaat gttcacctca atacacacct
     2221 gcaaaggcgg cattgaggaa ggacgttgcc cgctcagccg gacagcggtc tttagacggc
     2281 atacggtatg cacccaatgc gcgcgttcgg cgacaaactt ggttttgttg gactgcacat
     2341 cgccgatgac gtgccacacg atgtcggtca aatccgccaa ctcttccgtt ttgccgtacc
     2401 actcctgaat atagttctcg ccgaaatcac gctgtccggc ggcgtaaact tcgcggatgc
     2461 cgtctgaagg gaaagtctta ccgacggcaa tcaggctgac ggaatgcggc ttccttcccg
     2521 cctgcagaac caattttcca atacggtcgg acacctcccg ataacgttct tgcaacaccg
     2581 tcatagatta tcccctaatt aaaaatgatt aaacagttga aacccctcca gtcagggcgg
     2641 tacaatcaag gttgttagaa ccattccaac caatcgaaac attatactaa acagagccgc
     2701 attatgcaga ttaccgactt actcgccttc ggcgctaaaa acaaagcatc cgaccttcac
     2761 ctgagttcgg gcatatcccc tatgattcgg gttcacggcg atatgcggcg catcaacctt
     2821 cccgaaatga gcgcggaaga ggtcggtaat atggtaactt cggtgatgaa cgaccaccag
     2881 cggaaaatct accagcaaaa cttggaagtc gacttctcgt tcgaactgcc caacgtcgcc
     2941 cgattccgcg tcaacgcctt caacaccggc cgcggtcccg ccgccgtatt ccgcaccatt
     3001 cccagcaccg tcttatcgct ggaagaattg aaagccccga gcattttcca aaaaatcgca
     3061 gaatcgccgc gcggcatggt attggttacc ggccctaccg gttcgggcaa atcgaccacg
     3121 cttgccgcga tgatcaacta catcaacgaa acccagccgg cacacatcct gaccatcgaa
     3181 gacccgatcg aattcgtcca ccaaagcaaa aaatccctga ttaaccagcg cgagctgcac
     3241 cagcacaccc tcagcttcgc caacgcgctg cgttccgcat tgcgcgaaga ccccgacgtt
     3301 atccttgtcg gcgagatgcg cgaccccgaa accatcggct tggcactgac cgccgccgaa
     3361 accggacact tggttttcgg cacgctgcac acgaccggcg cagcaaaaac cgtcgaccgt
     3421 atcgtggacg tattcccggc gggagaaaaa gaaatggtgc gctctatgct gtccgaatcg
     3481 ctgaccgccg tcatctccca aaacctgctg aaaacgcacg acggcaacgg ccgtgtcgcc
     3541 tcgcacgaaa tcctgattgc caaccccgcc gtccgcaacc tcatccgcga aaacaaaatc
     3601 acgcagatta actccgtcct gcaaaccggg caggcgagcg gtatgcagac aatggaccaa
     3661 tcgctgcaat cgctggtgcg ccaagggctg atcgcaccgg aagtcgcacg cagacgcgcg
     3721 caaaacagcg aaagtatgag tttctgacac acaaccgcct tccggccata ccggcgggaa
     3781 aacaaggcgc aaacacgcgg ggcgggacgc agcatcccgc ccggctacct ttccgaacaa
     3841 gaagcgtccg ccttcctgtt gaaacctgcc gccgcaaact gcaaggctta aaccgaaaag
     3901 aagctaacga tgaataccga taacctgcac gacatcttgg acgaaatggt tcaagtgtat
     3961 tctcaaaaaa aacaaagccg atccgaaacc ccggccgaaa tcggcgcaca cttccacccg
     4021 ctgctcgacc gcctgtgcga aaccgcagaa gcacaaaacg cgtccgacat ccttatcagc
     4081 aaaggattcc cgccctcgtt gaaaatcaac agcgcattaa ccccgcagcc gcaaaaggcg
     4141 ctgacgggcg aggaaaccgc cgccatcgcc gcatcgacga tgaacgccga acaatcggaa
     4201 atattccggc gcgacggcga aatcaactac tccgtccagt cgcgcagcgg cacgcgctac
     4261 cgcgccaacg cctaccacag ccaaggcagc gcaggtttgg ttttgcggcg catcaaccac
     4321 gtcatcccgc aaatgcagga attaggcctg cccgaaaaac tcaaagacct cgccgtcgca
     4381 ccgcgcgggc tgctgattat cgtcgggcct accggttcgg gcaaatccac cacgatggcg
     4441 actatgctcg aacaccgcaa caaaaccctg cccagccata tcgttaccat cgaagacccg
     4501 attgagttta tctacaaacc gcgccgctgc atctttaccc agcgcgaaat cggcgtcgac
     4561 accataaact ggcagacggc ggtacaaaac gctatgcgcc aatcccccga cgtggtctgc
     4621 atcggcgaag tccacagcag ggaaagtatg gaatacgcga tgcagctcgc ccaaaccggc
     4681 cacctgtgca tttttacgct ccacgccaac accgcgccgc agtcgctcga acgcatactc
     4741 aacttctacc ccaaagaaca gcacaaccaa atactgatcg acatcgccct caacctgacc
     4801 ggcatcatct gccaacgcct cgccctcaaa caagacaaaa cgggcaggac ggcggttgtc
     4861 gacttgctca tcaacacgcc cgccatccaa gacttcatcc tgaagggcga cctgatgaac
     4921 atcagtaaaa tcatggaaac cgccaaaacc gacggaatgc agacgatgga tcaaaacctt
     4981 ttcgaactgt accgtcacgg catcatcagt tacgaagaag ccctgcgcca gtccgtttcc
     5041 gccaacaacc tgcgattgca catccaactg cacaaagaag gcaaaacgcc cgaactcctt
     5101 tacgacaggg tcaacggtct caacctcatt tcctgatccg caaaacccaa tgccgtctga
     5161 aaaccgcatc cccgttttca gacggcatga ttttatccgc cccattcatg tgctacact
//
LOCUS       DAWKOX010000142         5187 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.142, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000142 DAWKOX010000000
VERSION     DAWKOX010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5187)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5187)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5187
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.142"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(396..707)
                     /locus_tag="WJK78_001651"
     CDS             complement(396..707)
                     /locus_tag="WJK78_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ7598553.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(704..1071)
                     /locus_tag="WJK78_001652"
                     /pseudo
     CDS             complement(704..1071)
                     /locus_tag="WJK78_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            complement(1887..1972)
                     /locus_tag="WJK78_001653"
     tRNA            complement(1887..1972)
                     /locus_tag="WJK78_001653"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1936..1938),aa:Leu,seq:gag)
     gene            complement(1986..2336)
                     /gene="secG"
                     /locus_tag="WJK78_001654"
     CDS             complement(1986..2336)
                     /gene="secG"
                     /locus_tag="WJK78_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ7598554.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(2343..3116)
                     /locus_tag="WJK78_001655"
     CDS             complement(2343..3116)
                     /locus_tag="WJK78_001655"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ7598555.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            3300..3803
                     /locus_tag="WJK78_001656"
     CDS             3300..3803
                     /locus_tag="WJK78_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ7598556.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRF
                     EASRQAA"
     gene            3905..4561
                     /locus_tag="WJK78_001657"
     CDS             3905..4561
                     /locus_tag="WJK78_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ7598557.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALEEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRRGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            4640..4963
                     /locus_tag="WJK78_001658"
     CDS             4640..4963
                     /locus_tag="WJK78_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ7598558.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
BASE COUNT         1025 a         1180 c         1522 g         1460 t
ORIGIN      
        1 aacgtcggcg ttaagggaag gggatcgaga atttgagccg ttgtttcaaa atgccgtctg
       61 aaatcgtttg agattcagac ggcatttaaa cagttctgcg cccgcccgtt ttgccttcaa
      121 gcccgcgccg cttaaatcca atcccccctg caacgggcgc aaaaaaatct ccgtgcctcg
      181 cggtcgggga tgtttcgggt ttcacgcccg tctgcgccgt gccttgctgt cgggctatgc
      241 cgtctgcacc gccgccgttt cggcttggtt tgatgcggtc gggcatttat gcggctacgc
      301 cctgatattc agttcggcgg tcttgcctgt tttggcaggc atattcagca gcgcgtctat
      361 tgtgaacttg ctgattttgc cgtttgccaa gtcggctacg caatggcttc gatacccttg
      421 tttttgacga tggtcagcag cttcaacgcc gcgccgctgg gctttttaac gccccgctcc
      481 caagccgaaa cgtgattttt tcccacgttg agatagatgg cgaaagcggc ttgcgatagt
      541 gcctccttct ccctgattgc cttgatgtct ccgccgctca acggtttgat ttcggtcagg
      601 caggacttgt caaagccgcg catagtcttt ttgtcgattg cgccgatgtt gtaagcccct
      661 tccatcattt catgaatggc ggctaatgcc tcgcttttgt atttcatgat tctatctccg
      721 tgataatgcc gtcttctttc aaagccgcca gctctgcccg cgtgtatttc agataatatg
      781 cggcggcttt tcggtaaacg tccagttctt tatccgaaat gttttccctg tcgttcttgg
      841 caaaggcgta aacgaaaatg ccctatctgc ctgtttgaac aatatcaggc tgcgatagcc
      901 gccgcttctg ccttgtcctt gccttgctat gcgctgctta atcacaccgc cgcctaaatc
      961 tgcgtctatc agcccgttat ccgcccgctc taccgcttcc agcagctcgg aatcgttgat
     1021 tttgtgcttc ttggcaaatt tcactatcca ttggtttttg aatatccgca ttgtgtagcc
     1081 gttgattagt gatacttgga attataccag agacagacaa cacggcaagc tgcctttttt
     1141 atgccccgca atttctccgt ttatgccgcc tgaaacactg gcggctaacc tgattatttt
     1201 ttaatcaatc gcttttaatg gctcaaattg cgtttttagc gcgtttcgct gtcttcctat
     1261 gtccccatat ataaccaagt ggtttaaccg ccattcctgc tcaaaatagg cgcggttccg
     1321 tgcgttttgg cttttcattc cgctacgctc ccactgccaa gacggtgaaa aaccggaaaa
     1381 ccccaaaagt tgttaccgat tcgttaccat ttgttaccgc atttgttacc gcatttgtta
     1441 ccaatttttt atctttttct tattttatag tgaattaaat ttaaaccggt acggcaaggc
     1501 gaggcaacgc cgtaccggtt taaatttaat ccactatagt ataggttttt tccaaaaacc
     1561 caaaaaaaaa ccgctctgca tcttggacgg tttccccctc attccctacg gtgcgtcagt
     1621 attccccgca agctatttcc cgcttggcat tcctgatttg gtggtcgttc agctttattt
     1681 ttacggtatt ttctcgcggt attttcggat gctgtaaaaa atcaggttag ttcaattagg
     1741 gtggattgga cgggattgta cggtcaggaa gggggacggc aggataacaa tcagcctgaa
     1801 agccttgtat tgattgggat tggttgacgg cattagacag gattaaacga aaaaaaacgc
     1861 ttagaatttc taagcgtttt gtgtgttggt gccgacagcg agatttgaac tcgcacagcc
     1921 tacggccact accccctcaa gatagcgtgt ctaccaattt caccatgtcg gcatttgaaa
     1981 aactgttatt tctgctgctg aggaacaggg gcagaaggtt cggtattgct tacgggtttg
     2041 ggtgcttgct gagtttgttg tacgttgctg aagtccaaac cgtgttttgt tgtgtgggtg
     2101 tgaatataca ccatagccat gcaggttgca aagaaaaatg ttgctgcaac ggcggtcgag
     2161 cggctgagga agttagcgtt gccggcagag ccgaatacgc cttgcgcgct gccgcttccc
     2221 gatccgaaag tcgcgccggc atccgcgcct ttgccgtgtt ggagcaatac taacacgatg
     2281 acggccaaag cggaaattat attaacaatc caaattaggg ttttgaaggc ttccatattt
     2341 ttctacgcat tttgtgcggc actgatgatg gcggtaaagg agtcgtacga caatgacgcg
     2401 ccgccgacga gtgcgccgtc cacataaggt actgcgaaga tgtcggccgc gttgtccgct
     2461 ttcacacttc cgccgtaaag gacgcggatt ttaacatcgc ttccgcacaa agacaagatt
     2521 tctttgtaga tgaatgcgtg catatcggca atctgttcga cggtggcgac tttgccggtg
     2581 ccgatcgccc agacgggttc gtaggcgacg gcgatgtttt tggtatccag cccttgcagg
     2641 atggaaagct gatgggcgat gacttcgtgt tctttgccgg cttcgcgctc ttcgaggctt
     2701 tcgccgacgc acaataacgg gatgagtccg acgttgagga cgttttccat tttgcggcgt
     2761 tggatttcgt ttttttcgcc gaaataaagg ctgcgttcgg agtgtccgat gaggacgatg
     2821 tctgtgccgg tgtcggcgag catttcggcg gacacttcgc cggtgtacgc gccgttgtcg
     2881 gggaagcggc tcacgtcttg ggcgcaggtg aggatgcggt tgtttaagac gatttgcatg
     2941 gcgttgtgca gttgcagcag gtaaacggtc ggggcggcga gtccgatgag gacgcgttcg
     3001 gcggtgggga ggatgcggaa gcggtgcatg agcgaattgt tgttctggag ccggccgttc
     3061 attttccagt tgccgatgac ccatttttga tcccacattc cgatttggtg atacatcttt
     3121 tttgctccgt gtcgtgtttt ttctgtctgc cgcgtgtggc gcgttgcaat gtgaagttta
     3181 gtggatatgc ggcgggttcg caacttgggg cgggcggctg cgggggcggt ttggaatgtt
     3241 gtttcgggca ggttgtttta taatggccgc ctgatatgta tgcaactata ggagatgtga
     3301 tgcacgcgct tcatttttcg gcttcggaca aggccgcgct ttatcgggag gtgttgccgc
     3361 agattgagtc tgtggtggcg gacgagacgg attgggtggc gaatttggcg aacacggcgg
     3421 cggttttgaa ggaggcgttc ggttggtttt gggtgggttt ttatttggtc gatacgcgtt
     3481 cggacgaatt ggttttggca ccgtttcagg ggcctttggc gtgtacgcgg attccgttcg
     3541 gtcgcggggt gtgcggtcag gcttgggcga agggcgggac ggtggtcgtc ggggatgtgg
     3601 acgcgcatcc cgaccatatt gcctgttcgt ctttgtcgcg ttcggagatt gtcgtgccgc
     3661 tgttttcaga cggccgctgt atcggcgtgt tggacgcgga cagcgaacat ttggcgcagt
     3721 ttgatgagac agatgctttg tatttgggcg aactggcgaa gattttggag aagcggtttg
     3781 aggcttcgcg ccaggcggct tgagtgatgg aaaggggcgg gcggcgcgtg ccgaagttgg
     3841 cgcggcggga gtgtggtttt ataatgcctg ccattgttga aacaattatt tgacggagca
     3901 ctaaatggat tttgaaaaag cgcggttcaa tatggtcgaa cagcaaatcc gtccttggga
     3961 tgtattggat tttgacgttt tggacgcttt ggaggagatt ccgcgcgagc tttttgtcga
     4021 tgaggatttg cagggtttgg cgtatgcgga tatggcgctg ccgcttgcca acggtcataa
     4081 gatgctggag ccgaaagtcg tggcgcggct ggcgcagggc ttgaagctga cgaaaaacga
     4141 tacggttttg gaaatcggca cgggttcggg ctatgcgacc gcgcttttgg caaaattggc
     4201 tggtcgtgtg gtgtcggacg acatcgatgc cgaacagcaa aaccgcgcca aagcggtgtt
     4261 ggacggcttg tctttggaaa acattgatta tgtgcaaaac aacgggttga ccgaactttc
     4321 cgcaggtgcg ccgtttgatg cggtttatgt cggcggtgcg gtaaaccttg tgcctgaagt
     4381 gttgaaagaa cagttgaaag atggcggacg catggtggtt atcgtaggac gcaagcctgt
     4441 tcaacgcgcg cttttgatta cgcgcagggg cgatgtgttt gaagagaagg tgctgttcga
     4501 taccttggtg gcgcatttgg atgataagga tgccgatccg tttggtggtt ttcagttttg
     4561 atgttcggat tgcgatgccg tctgaaagcg ggtttggggc ttcagacggc attttgcttg
     4621 gttttttttg gggggtgcga tggatattgt gcaacttggg tcggcggaat tgaaggcgtg
     4681 gatggacgaa gggcggatgt tttgtttgtt ggacgtgcgt acggatgaag aaacggcggt
     4741 ttgttcgctg ccaaatgcgc tgcatatccc gatgaatctg attccgctgc ggcagaacga
     4801 gctgccggat gatgtgccgc ttgtggtgta ttgccaccac ggtatccgca gcctgcatac
     4861 ggcgatgtat ctggcggacg cgggttttga aaacctgtac aaccttcagg gcggcatcga
     4921 tgcatgggcg gccgagattg acggcaacat gatgcgttat tgaggcaggc atttcagacg
     4981 gcattcctta aatgcgtgta cctgtggtgt tccaaaaggt cgtctgaaag tgcagcttct
     5041 gcgaagctaa agcgcggtat caacgaagtt aaaatttgcc tgaaccttaa aggcagcctg
     5101 caccccaatc ccctctcccg tgggagaggg ctaggacgag gctggcaaac tgaaagtttg
     5161 cttgggcggc attttcaatg tgcaggc
//
LOCUS       DAWKOX010000143         5076 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.143, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000143 DAWKOX010000000
VERSION     DAWKOX010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5076
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.143"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..744
                     /locus_tag="WJK78_001659"
     CDS             <1..744
                     /locus_tag="WJK78_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7598559.1"
                     /translation="KLGVKTGLSIDKNRLPYLDEYYKTTKPAGTLFEPDYEALNAYKP
                     QLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDALAQIFGKQAEADKLKA
                     EIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWLHKDIGVPAVDEAIKEG
                     SHGQPVSFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNPLVAETTAWKKGQVVYL
                     VPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            762..911
                     /locus_tag="WJK78_001660"
     CDS             762..911
                     /locus_tag="WJK78_001660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598560.1"
                     /translation="MPSETRMQTASCVSDGIARYGGFKQGFPLRRFGLPCLNLLRRNA
                     FPFCL"
     gene            908..1876
                     /locus_tag="WJK78_001661"
     CDS             908..1876
                     /locus_tag="WJK78_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7598561.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGASQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFIGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDILGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            1866..2840
                     /locus_tag="WJK78_001662"
     CDS             1866..2840
                     /locus_tag="WJK78_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ7598562.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELAVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            2885..3511
                     /locus_tag="WJK78_001663"
     CDS             2885..3511
                     /locus_tag="WJK78_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598563.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAFMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGVGPAGRFARRNLLSFGAGEINGTLALRRRDTGKTVAVSLNAALQPFAPE
                     MRELMPKTVGGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3595..4353
                     /locus_tag="WJK78_001664"
     CDS             3595..4353
                     /locus_tag="WJK78_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7598564.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLACTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDFADRYLTELSGGQRQRAMIAMVFCQRTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPDDIFTAANIKTLFDMDVSVLDHQSKKLIVHHI"
     gene            complement(4412..4750)
                     /locus_tag="WJK78_001665"
     CDS             complement(4412..4750)
                     /locus_tag="WJK78_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ7598565.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            4845..5057
                     /locus_tag="WJK78_001666"
     CDS             4845..5057
                     /locus_tag="WJK78_001666"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598566.1"
                     /translation="MPETVIPAQAGIPISAFQQYLKVSVNPNFHIPNRTETTAFDLKT
                     YGSSCPPLYFLQLSAYPALGKNQKNR"
BASE COUNT         1061 a         1523 c         1340 g         1152 t
ORIGIN      
        1 aaattgggcg tgaaaaccgg tttatccatc gataaaaacc ggctgcctta tttggacgaa
       61 tattacaaaa ccacgaaacc tgccggaact ttgttcgagc cggattacga agccttaaac
      121 gcctacaagc cgcagctcat catcatcggc agccgcgccg ccaaggcgtt tgacaaattg
      181 aacgaaatcg cgccgaccat cgaaatgacc gccgataccg ccaacctcaa agaaagtgcc
      241 aaagagcgta tcgacgcgct ggcgcaaatc ttcggcaaac aggcggaagc cgacaagctg
      301 aaggcggaaa tcgacgcgtc ttttgaagcc gcgaaaactg ccgcgcaagg caaaggcaaa
      361 ggtttggtga ttttggtcaa cggcggcaag atgtcggctt tcggcccgtc ttcacgactg
      421 ggcggctggc tgcacaaaga catcggcgtt cccgctgttg acgaagccat caaagaaggc
      481 agccacggcc agcccgtcag ctttgaatac ctgaaagaga aaaatcccga ctggctgttc
      541 gtcctcgacc gaagcgcggc catcggtgaa gagggtcagg cggcgaaaga cgtgttggat
      601 aatccgctgg ttgccgaaac aaccgcttgg aaaaaaggac aagtcgttta ccttgttcct
      661 gaaacttatt tggcggccgg tggcgcgcaa gagctgctga atgcaagcaa acaggttgcc
      721 gacgctttta acgccgcgaa ataatgaaac ggcggcattc gatgccgtct gaaacacgga
      781 tgcaaaccgc ttcctgtgtt tcagacggca ttgcccgata cggaggcttc aaacaaggct
      841 ttccgctccg acggttcgga ctgccttgtt tgaatcttct acgccgtaac gcttttccct
      901 tctgtttatg actgccaaac ctttttccct caacctgact aacctcctgc tgctggcggt
      961 gttgtttgcc gtcagcctgt cggtcggcgt tgccgatttc cgctggtcgg atgtgttttc
     1021 gctgtccgac agccagcagg ttatgttcat cagccgcctg ccgcgcacgt ttgcgattgt
     1081 gctgacgggc gcgtcgatgg cggtggcggg gatgattatg cagattctga tgcgcaaccg
     1141 ttttgtcgaa ccttctatgg cgggcgcgag ccaaagtgcg gctttgggtt tgcttctgat
     1201 gtccctgctg ctgcctgccg cgccgctgcc ggtcaaaatg tcggttgccg ccgttgccgc
     1261 gctaatcgga atgctggtgt ttatgatgct tatccgccgc ctgccgccga cggcgcaact
     1321 gatggtgccg ctggtgggga ttattttcgg cggcgtggtt gaggcggtgg cgacctttat
     1381 cgcgtatgaa aacgaaatgc tgcaaatgct cggcgtgtgg cagcagggcg atttttcgag
     1441 cgtgctgctg gggcggtacg agctgctttg gattacgggc ggtttggcgg tgtttgccta
     1501 tctgattgcc gaccggctga cgattttggg gctgggcgag acggtcagcg tgaatttggg
     1561 tttgaaccgg acggcggtgt tgtggtcggg gctgattatt gtggctttga ttacgtcgct
     1621 ggttatcgtt acggtcggca atattccgtt tatcgggctg gtcgtgccga acatcatcag
     1681 ccgcctgata ggcgacaggc tgcgccaaag cctgcctgcg gtggctttgt tgggcgcgtc
     1741 tttggtttta ttgtgcgata ttttgggacg cgtgattgtg tttccgtttg aaattccggt
     1801 ctcgaccgtc ttcggggtat tgggtacggc gttgtttttg tggcttttat taaggaaacc
     1861 tgcccatgcc gtctgaaaaa aatatcggtt ttatggcagg aagcagccgt ccgttgtggg
     1921 tagcttttgc attgttgctg gtttcctgcg tcctgtttat gacgctcaac gtcaaaggcg
     1981 attgggattt tgtactgcac ctgcgtctga ccaaacttgc cgcgctgctg atggtcgcct
     2041 atgcggtcgg cgtgtccacg caactcttcc aaacgctgac caacaatccg attctgaccc
     2101 cttcaatttt gggtttcgat tcgctgtatg tgtttttgca gaccttgctg gtgtttacgt
     2161 tcggcggcgt gggctatgct tccctgccgt tgacgggcaa attcggcttt gaacttgccg
     2221 ttatgatggg cggctcgctg ctgctgtttt acacgctcat ccgtcagggc ggacgcgatt
     2281 tgccgcgtat gattttaatc ggcgtgattt tcgggatttt gttccgcagc ctgtcgtcgc
     2341 tgctttcgcg catgatcgac cccgaagaat ttacggcggc gcaggcgaat atgtttgccg
     2401 gattcaatac cgtccacagc gagcttttgg gcataggcgc gctgattctg ctcgtcagcg
     2461 cggcggtcgt ttggcgcgaa cgctaccgct tggacgtaca ccttttgggg cgcgaccaag
     2521 ccgtcaattt gggcatcagc tacacgcgca acaccttgtg gatactgctt tggattgccg
     2581 cattggtggc gacggcgacc gccgtggtcg gcccggtaag ctttttcggg cttctcgccg
     2641 cctcgcttgc caaccacttt tccccgtccg tgcgccattc cgtccgcctg ccgatgacgg
     2701 tttgtgtcgg cggcatcctc ctggtcggcg gacagaccgt attcgaacac ttcttgggca
     2761 tgaaggcggt attaagcgtg gtggtcgaat ttgcgggcgg actcgttttc ctctatctcg
     2821 ttttaaaaca caaaaaatga cggatgccat ctgaacggca gcccgccccg aaaggacaaa
     2881 ccatatgacg caagaacgtt tacccgaatt tttcgaccgc gccccgacgc tgaccgtaca
     2941 agacccgctt gccgcattcc tcggcgcggc cgaaaacggc atcctcactt accgctacgc
     3001 cgatgccgtg cgcctgtgcg gacattcctg cccgaccgtc gcgggcgcgt acctgatggt
     3061 tatcaaaggt ctgaaagcac tttacggcga agagctgccc gaacgcggcg gcatcgaagc
     3121 ctttatgcag ggcgcgcgcg acgaaggcac ggtcggcgta accgcgtccg tcgtccaact
     3181 ccttaccggc gccgcacccg aaaccggctt tggcggcgta ggccctgccg gacgctttgc
     3241 ccgccgcaac ctcttgtcct ttggtgcagg cgaaatcaac ggcacactcg cgctccgccg
     3301 ccgcgatacc ggcaaaaccg tcgccgtcag cctcaacgcc gccctgcaac ccttcgcacc
     3361 cgaaatgcgc gaacttatgc ccaaaaccgt cggcggcagc gcaagcgcag aagaactcga
     3421 acgcttcgga caactctggc aggcacgcgt taaagcattt ttgaccgaat cggcggacga
     3481 cccgcagttc gtcatcgtcc gcgaagtgtg agcgttcaga cggcattccg aatttcaaat
     3541 gccgtccgaa cccccgccaa acaacaacaa acctacgccc gacaagcatc cgccatgatt
     3601 accatccgca acgtcagcta ccgcatcggc acacgcccca tcctcgacaa cgtcagcctc
     3661 gacatccccg aaggcggcat taccgccctc gtcggcccca acggtgcggg caaatccacc
     3721 ctgttttcct ttatggcgcg gctgcgcccg cttgaaagcg gcagcatcgc ctaccgcggc
     3781 aaaaaccttg cctgcacccc caccgccgaa ctcgccaaaa ccctgtccat cctcacccaa
     3841 gaaaacagca tcatgagccg catcaccgtg cgcgacctgc tcatgttcgg ccgctatccc
     3901 taccatcaag gcagaccgac tgccgaatgc cgccgtatcg ttaacggtgc aatcgaagaa
     3961 ttccacctgc aagacttcgc cgaccgctac ctgaccgagc tttccggcgg acaacgccaa
     4021 cgcgccatga ttgccatggt gttctgccag cgcaccgact acgttttgct ggacgaaccg
     4081 ctgaacaacc tcgacatgta tcatgcccgc tccctcatgc aaatcctgcg ccggctgacc
     4141 gacgaacaca agcgcaccac cgtcgtcgta ttacacgaca tcaaccaggc cgccgcctac
     4201 gccgaccacg tcgtcgccat gaaaaacggc caagtcgcca tgcagggcaa gcccgacgac
     4261 attttcaccg ccgcaaacat caaaaccctg ttcgatatgg atgtgtccgt cctcgaccac
     4321 caaagcaaaa aactcatcgt ccaccatatc tgaagctcaa aaagaaaatg ccgtctgaaa
     4381 acctttcaga cggcatttcc attccaaacg ctcaaaccgc cgcgtccgca cgttcgcccg
     4441 tgcggatacg gattgcctcc tcgaccggca gcacaaaaat cttgccgtcg ccgatttttc
     4501 ccgaacgcgc cacctcgaca atcacgtcaa tcgcgcgttc cacagcgtca tccgccaaca
     4561 ccagctcgat tttgaccttg ggcaggaaat cgacagcgta ttccgcgccc cggtaaatct
     4621 ccgtatgccc cttctgcctg ccgaaccctt tgacctcgct gacggtcata cccgtaatgc
     4681 cgatttccgt caacgcctcg cgcacgtcgt cgagtttgaa cggtttgaca atcgcctcga
     4741 tttttttcat cacattctcc attaattaac gtaaacaaac gacaaatata gcagaaaccg
     4801 ccggcaaacg ataaacggta ctgttcgccc ggcgatgcgg cgatttgccg gaaaccgtca
     4861 ttcccgcgca ggcgggaatc ccgatctctg catttcagca atatttaaag gtttctgtaa
     4921 atccaaactt ccatattcct aaccgtacgg aaacgacggc atttgatcta aaaacatacg
     4981 gaagcagttg cccgcccctc tacttcctgc aattatccgc atacccggct ttgggtaaaa
     5041 atcagaaaaa cagataaaac ccttattcct taatat
//
LOCUS       DAWKOX010000144         4991 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.144, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000144 DAWKOX010000000
VERSION     DAWKOX010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4991)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4991)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4991
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.144"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            243..4931
                     /gene="iga"
                     /locus_tag="WJK78_001667"
     CDS             243..4931
                     /gene="iga"
                     /locus_tag="WJK78_001667"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HEZ7598567.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWSASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLDTYKDKNRFSSFVRVGAGRQLVYEKGAYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNTHYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADEIKQRDNAGTIKG
                     NGEHHWNITFGTNSHIGSTAVRLAGNERDANNGQNVTFEDNGTLVLDQNINQGAGGLF
                     FKGDYTVKGINNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQ
                     GQLKVGDGTVILNQKADSNQKVQAFSQVGIVSGRGTLVLNSPDQINPNNLYFGFRGGR
                     LDANGNDLTFEHIRNVDEGARIVNHNTDRASTITLTGKSLITDPKTISIHYIQNNDDD
                     DAGYYYYRPRKPIPQGKDLYYKNYRYYALKSGGSVNAPMPENGQTENNDWILMGSTQE
                     EAKKNAMNHKNNQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGK
                     ISVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVN
                     QSASFSSGRNVSNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKAL
                     NSFGATQINGNVNLNQNAALVLGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNL
                     SLADSHIHLNNASDAQSANQYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGH
                     YQLHVQDKTGEPNQEGLNLFDASSVQDRSRLSVSLANNHVDLGALRYTIKTENGITRL
                     YNPYAENRRRVKPAPSPATNTASQAQTDSAQIAKPQNIVVAPPSPQANQAEEAKRQQA
                     KAEQVKRQQAEAEKVAHQKAEEAKRQQDALARQQAEQERQRLEAERQAAEIAKQKAEA
                     EEAKRRAAEIAEQKAAAEEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQ
                     KAEAEREAAELAKQKAEEEGRQAAQSQPKRRNRRAIPPELSSDATTRALPRIARNSNP
                     DASDYEEIPLDALEDEDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAAAQ
                     PQAQAVAQADAVSTNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEKNSVWMS
                     NIGYGRDYASAQYRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQASGKNT
                     FVQANLYGKYYLNDAWYVAGDIGAGSLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQ
                     FEIVPSAGIRYSRLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLS
                     AAYFANYGKGGVNVGGNSFAYKADNQQQYSAGAALLYRNVTLNVNGSITKGKQLEKQK
                     SGQIKIQIRF"
BASE COUNT         1679 a         1157 c         1087 g         1068 t
ORIGIN      
        1 caagcgggaa tccaaaaaca aaaagccgca gaaatttaac ggaagaaccg aaccccgaaa
       61 atcggcttcc caccttcgcc tgaataacag aacaaaggaa gcggaaataa aaacatcggg
      121 attctttttt taaattggca ataaaacacc aaaatgaata attcacacaa caaaaaaata
      181 gtcaacaccg ccaaatcggc gtaaaataca agacattatc acccttaaaa cggtaaaacc
      241 ttatgaaaac caaacgtttt aaaattaacg ccatatcctt atccatcttt cttgcctatg
      301 cccttacgcc atactcagaa gcggcattgg tcagagacga tgtcgattat caaatattcc
      361 gtgactttgc agaaaacaaa ggcaaatttt ttgtcggcgc aaccgattta tcagtgaaaa
      421 acaaacaagg tcaaaacatc ggcaacgcat tatccaacgt accgatgatt gattttagcg
      481 ttgcagatgt caacaaacgc atagcaacgg tagtcgatcc ccaatatgct gtcagcgtca
      541 aacacgccaa agcagaagtc catacttttt attacggtca atacaacggt cataatgatg
      601 tagccgacaa agaaaatgaa taccgcgttg tcgaacaaaa taactatgaa ccacataaag
      661 cttggagtgc gagcaactta ggccgtctcg aagattataa tatggcgcgt tttaacaagt
      721 ttgtaaccga agttgcgccg attgcaccaa ctgatgccgg cggcggattg gatacctaca
      781 aagataaaaa ccgtttttcc tcttttgtca gagttggcgc aggcaggcaa ttagtttatg
      841 aaaaaggggc ttatcatcaa gaaggaaatg aaaaaggcta cgatttgcgc gatctttcac
      901 aagcctatcg ttatgccatt gcaggtacac cttataaaga tattaatatt gaccaaacaa
      961 tgaataccga aggtttgatt ggctttggta atcacaatac acactattca gcagaagaac
     1021 ttaaacaagc actctcgcaa gatgcgttaa caaattacgg cgtattgggc gatagcggct
     1081 ctccgttatt tgcttttgac aaacaaaaaa atcaatgggt ctttttggga acttatgatt
     1141 attgggcagg ttacggaaaa aaatcttggc aagaatggaa tatctataaa aaagaatttg
     1201 cagatgaaat caaacaacgc gataacgccg gcaccatcaa aggtaatgga gaacatcatt
     1261 ggaacattac ttttggcaca aacagccata tcggttcgac agcggtaagg cttgccggca
     1321 atgaaaggga tgcaaacaac ggacagaatg ttacctttga agacaacggc actttggtat
     1381 tggatcaaaa catcaaccaa ggcgcgggcg gtctgttttt caaaggcgat tacacagtca
     1441 aaggtataaa taatgacatc acttggctag gtgcggggat tgatgttgcc gacggcaaaa
     1501 aagtcgtttg gcaggtcaaa aatccgaatg gcgacagatt ggcaaaaatc ggcaaaggca
     1561 cattagaaat aaacggcaca ggcgttaacc aagggcaatt aaaagtcggc gacggtacgg
     1621 ttattctgaa tcaaaaagcc gattcaaacc aaaaagtcca ggctttctcc caagtcggca
     1681 ttgtcagcgg acgcggtaca ttggtgctga acagtccgga ccagattaac ccgaataatc
     1741 tgtatttcgg tttccgtggc ggtcgtttgg atgccaatgg caatgacttg acttttgaac
     1801 acatccgcaa cgtggatgaa ggcgcgcgca ttgtcaacca caacacagac cgcgcctcca
     1861 caatcacgct aacgggtaaa tctttgatta ccgatcccaa aaccatctct attcattata
     1921 ttcaaaataa tgatgatgac gatgctggtt attactatta ccgccctagg aaaccgattc
     1981 cgcaaggcaa agatctttat tacaaaaact atcgttatta cgccctaaaa tccggcggca
     2041 gcgtgaacgc accgatgccc gaaaacggac aaacggaaaa taacgactgg attttaatgg
     2101 gcagcacaca agaagaagcc aagaaaaacg cgatgaacca caaaaacaat cagcgtatta
     2161 gcggttttag cggtttcttt ggcgaagaaa acggaaaagg acataacggt gcattaaacc
     2221 ttaatttcaa cggcaaaagc gcgcaaaacc gtttcttgtt aacaggtggc actaatttaa
     2281 acggaaaaat aagcgtaact caaggcaatg tcttgttatc aggtcgtcca acaccacacg
     2341 caagagattt tgtgaacaaa tcttcagccc gaaaagacgc acatttctcc aaaaacaatg
     2401 aagtcgtatt tgaagacgac tggataaacc gcacattcaa agccacagaa attgcggtta
     2461 atcaatccgc atcattctct tccggcagaa atgtatccaa cattaccgcc aacatcaccg
     2521 caacagacaa cgccaaagta aatttgggtt acaaaaacgg cgatgaggtt tgcgtgcgct
     2581 cggactatac cggttatgtt acctgcaaca caggcaactt atccgataag gctttaaaca
     2641 gctttggagc gacacagatt aacggcaatg tgaatctgaa ccagaatgcg gcattggtct
     2701 tgggcaaggc tgcattatgg gggcaaattc aagggcaagg aaacagccgt gtcagcctaa
     2761 accaacatag caaatggcat ttgactggcg acagccaagt acacaatctg tcattggcgg
     2821 atagccatat tcatttgaac aatgcctccg atgcgcaaag tgcaaatcaa taccacacgc
     2881 tcaaaatcaa tcatttatcc ggtaacgggc attttcatta tctgacgcac ctggcgaaaa
     2941 atcttgggga taaagtgctt gtgaaggaat ccgcatccgg tcattatcag ctccatgttc
     3001 aagataaaac aggcgaaccc aatcaggaag ggctgaatct ctttgatgca tcatccgtac
     3061 aagaccgctc ccgcctttct gtttccttgg cgaataacca tgtagattta ggggcattgc
     3121 gttatacaat caaaacagaa aacggtatta cccgattgta caatccttat gccgagaacc
     3181 gccgccgagt caaaccggcc ccgtctcctg ccacaaacac ggcttctcaa gcacaaacgg
     3241 acagtgcaca aattgccaag cctcaaaata tcgtcgtcgc accgcctagc ccgcaggcaa
     3301 atcaagccga agaagcaaaa cgccaacaag caaaagcgga gcaagtgaag cgtcagcaag
     3361 cagaggcaga aaaagtcgca catcaaaagg ctgaagaagc gaaacgtcag caagatgccc
     3421 ttgcccgcca acaagcagag caagaacgcc aacgattgga agccgaacgc caagctgccg
     3481 aaattgccaa acaaaaagca gaagccgaag aagcgaaacg ccgagccgct gaaattgccg
     3541 agcaaaaagc agctgccgaa gaagcaaaac gccaagctgc cgaacttgca cgccaacaag
     3601 aagaagcacg aaaagctgca gagttggctg ctaagcaaaa agcggaaact gaacgcaaag
     3661 cagcagaaat tgccgagcaa aaagcggaag ccgaacgtga agccgccgaa cttgccaagc
     3721 aaaaggcgga agaagaaggt cgccaagcag cacaatctca acccaaacgt cgtaaccgca
     3781 gggctatacc accggaactg tcatctgatg caacaacccg agctttgcct aggatagcga
     3841 gaaattcaaa tcctgatgcc agcgattatg aagaaatccc cttggatgcg ttggaagatg
     3901 aagatgtatc cgaatcggtt gacacatcag acaaacagcc tcaagacaat acggaacttc
     3961 atgaaaaagt tgagacagtg agtttgcaac caagagccgc tcagccgcga gcccaagccg
     4021 ccgcgcagcc gcaagcccaa gccgtcgcgc aagccgatgc agtcagcacc aataccaact
     4081 cggctttatc tgacgcaatg gcaagcacgc aatctatctt gttggataca ggtgcttcat
     4141 taacacggca cattgcacaa aaatcacgcg ctgatgccga aaaaaacagc gtttggatgt
     4201 cgaacatcgg ttatggccgt gattatgctt ccgcacaata tcgccggttt agttcgaaac
     4261 gcacgcaaac acaaatcggc attgaccgca gcttgtccga aaatatgcag ataggcggcg
     4321 tattgactta ctctgacagt cagcatactt ttgatcaggc gagcggcaaa aatacttttg
     4381 tgcaagccaa cctttatggt aagtattatt taaatgatgc ttggtatgtg gccggcgata
     4441 ttggtgcagg cagcttgaga agccggttac aaacacagca aaaagcaaac tttaaccgaa
     4501 caagcatcca aaccggcctt actttgggca atacgctgaa aatcaatcaa ttcgagattg
     4561 tccccagtgc gggaatccgt tacagccgcc tgtcatctgc agattacaag ttgggtaacg
     4621 acagtgttaa agtaagttct atgtcagtga aaacactgac ggccggactg gattttgctt
     4681 atcggtttaa agtcggcaac cttaccgtaa aacccttgtt atctgcagct tactttgcca
     4741 attatggcaa aggcggcgtg aatgtgggcg gtaattcctt cgcctataaa gcagataatc
     4801 aacagcaata ttcagcaggt gccgcgttac tgtaccgtaa tgttacatta aacgtaaatg
     4861 gcagtattac aaaaggaaaa caattggaaa aacaaaaatc cggacaaatt aaaatacaga
     4921 ttcgtttcta aaatactaaa ttcatagcaa aataaaatgc cgtctgaact caggcttcag
     4981 acggcatttt t
//
LOCUS       DAWKOX010000145         4814 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.145, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000145 DAWKOX010000000
VERSION     DAWKOX010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4814)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4814)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4814
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.145"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(456..800)
                     /locus_tag="WJK78_001668"
     CDS             complement(456..800)
                     /locus_tag="WJK78_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598568.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(838..1161)
                     /locus_tag="WJK78_001669"
     CDS             complement(838..1161)
                     /locus_tag="WJK78_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598569.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYETFDIL
                     KQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQEISQDIL
                     NEIFR"
     gene            complement(1164..1352)
                     /locus_tag="WJK78_001670"
     CDS             complement(1164..1352)
                     /locus_tag="WJK78_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HEZ7598570.1"
                     /translation="MEEVKANPQGKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEI
                     HYIENSRTGEKTDFKFKD"
     gene            complement(1422..1757)
                     /locus_tag="WJK78_001671"
                     /pseudo
     CDS             complement(1422..1757)
                     /locus_tag="WJK78_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(1863..2234)
                     /locus_tag="WJK78_001672"
     CDS             complement(1863..2234)
                     /locus_tag="WJK78_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ7598571.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(2231..2482)
                     /locus_tag="WJK78_001673"
     CDS             complement(2231..2482)
                     /locus_tag="WJK78_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598572.1"
                     /translation="MDNTRIMAAHEAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQT
                     WGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            complement(2614..2820)
                     /locus_tag="WJK78_001674"
     CDS             complement(2614..2820)
                     /locus_tag="WJK78_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598573.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(2830..3675)
                     /gene="mafB"
                     /locus_tag="WJK78_001675"
                     /pseudo
     CDS             complement(2830..3675)
                     /gene="mafB"
                     /locus_tag="WJK78_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(3772..3984)
                     /locus_tag="WJK78_001676"
     CDS             complement(3772..3984)
                     /locus_tag="WJK78_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598574.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(4061..4420)
                     /locus_tag="WJK78_001677"
     CDS             complement(4061..4420)
                     /locus_tag="WJK78_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ7598575.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNCFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(4425..>4814)
                     /locus_tag="WJK78_001678"
     CDS             complement(4425..>4814)
                     /locus_tag="WJK78_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598576.1"
                     /translation="PPKSITSGGKANAATYPQLVNQLTGQNLKNIAAQDPRLSLALHK
                     SEKNFPIGTATYEEADRLGKIWVGEGARQTSGGGWLSIDGTRQYRPPTEKNSQFATTG
                     IQANFETYTIDSNGKRNKIKNGHLNIR"
BASE COUNT         1341 a          935 c          761 g         1777 t
ORIGIN      
        1 attaatacct tgtaaagttt gctgcgcaga gatgtaggtc ggatatttgt atccgacaaa
       61 aatatttgac gcatctatcg tttccgaaat gccgctgttg gaaaatgtcg gattcgagaa
      121 tccgacctac ggctatttcg tttaagtcat aaatagccat tcatgttcct tctgaatttg
      181 cttttgctat ccttagaacc aatcatataa acattatcat cattaattaa tgttctaagt
      241 ttatgaagcg gtcaaatctg tcaaactacc agagatgaag catatcctcc tggaagtaat
      301 tctgttcgtg ctgtttccat atcttctttg ccatcatcag ttacttctct gtctaaataa
      361 aatcttacga taagtttttg tctaatttca tcaaattctg ccgtaattaa tcttatattg
      421 atatgaatac acggttcata cctgctatta gccagtcagg tgtagttgga tggggattca
      481 tttttaataa tatcttcaag caagtgaaat gtaagaaaag cgtagatact tgaaggccgg
      541 ctatctgatt ggcaaaaaga aatttcggag ataaagaatt tccgtttata tttttcataa
      601 attaaatcaa caccttgttt tacataaaaa ctaacttcct caggaaggat atttataaca
      661 ttctctcctt ttacttttat agttaatggt ttgattttta tgttttcatg aatatctgat
      721 aggattattt ctaaaaaatt atttttattt ccagtcattc tggctatttt atgtatattt
      781 ccattgtgtt cgattatcat tttatttttt ccaaggattt ccttctatat tgatagttta
      841 tctaaagatt tcatttaaaa tatcctgact aatttcttgt ttatataatt ctacaatttt
      901 ctgtttctgt gtatttgtat aaaatttttc gttggtatct gcttgatatt ttaattgtct
      961 caatatttcc atgatttcat attctgattt ttcatcatat tcttcaatca tgtaatcaac
     1021 aaattgtttt agaatatcaa aggtttcgta actttccaaa attttaatat gtttatcggc
     1081 aaaattggac atataccatt cgtcagtgat tggattagta tttaaatcat ctaaaaaaac
     1141 atttacatca tctaaaaaca tgactaatcc ttaaacttaa aatctgtttt ctcaccggtt
     1201 cttgagtttt caatgtaatg tatttcaatt ttgtttacgt tttgaacacg cttaacccaa
     1261 ccgtcttttg ctaaccaacc atttttagta tcggacatag gaggtattct cgcaggagtt
     1321 ttgccctgtg ggtttgcctt aacttcttcc attgctaatt gttcctttaa attattaggt
     1381 attgtacgac cggttgattt ttcaacagat tgtgtcccta tttttaatga tttgtttccc
     1441 ccagccattt ccccgtctac agtctgcata gggcgggcag caggtttttt atagccggta
     1501 tttttaaccc aatcccattt agtcgggtta agttctactt ttttaccgcg ccaaaccgta
     1561 cctgcggcct ctgctacgga aagggcagtt tgggctgttg cagttatatt cggatgggca
     1621 tcagcccatt gtctggcgga attaatgccg ttttttaccg caaaagcact gtcctgtaat
     1681 aggctcgcgg cagcaagttg tgcttccgga cttaaatttc ctaattcatt aatatcttgt
     1741 aaagtttgct gcgcagagat gtaggtcgga tatttgtatc cgacaaaaat atttgacgcg
     1801 tctatcgttt ccgaaatgcc gctgttggaa aatgtcggat tcgagaatcc gacctacggc
     1861 tgctaccaac catcattttc agcttctttt agccaagtat caaaattttc aaaagtctcg
     1921 taatattttg tattatctaa attaactact ataattttag gattacctga tttatctgaa
     1981 atatcaaaac aggcagccca ctcttggttt ctagcaaaag gtaataggtt tggaatgcca
     2041 gttatttcaa aataaatgtc aattacttct gatatattgc tttctgcatt ttcaaaccac
     2101 caaggaaaag aatattgttc atcgtagtta atggcatgag tggattgagc taattttaaa
     2161 taactttgcg gatatttaaa tcctttagga agcattgctt caggatacgg aacaaaacta
     2221 ttttgtttta tcatttccta agtaccttta catcataaat acttccgtta ggaaatcttt
     2281 tgctccaccc ttctggaact cctttttgtg tttcttgctt tctaattcgt agctggatag
     2341 cttctcccca agtttgaggc tcaataccat catgcttaaa cctgattctc tcttttgatg
     2401 ataatcggtc attaaaatta tgaacattcg cttccacttt tacccctgct tcatgtgctg
     2461 ccataatacg cgtgttatcc atactagtag gtgctccatc aggcatatta acaacatcaa
     2521 ccctgtcgcc aacccatgat ttttttcgtt cattgcagct acaagagaat catagttgta
     2581 atttgcacta ggctctgaca aaaatttggg ttgttaagtt gtcatttttt tataaattcc
     2641 agcaaactgt tgttgtaaat tatctacttc atgttttcta acaccagata cattttcaaa
     2701 ttctcttgaa tctacacata cgcccgcata tatctcattc aagatagctc gtaaaacaaa
     2761 aacttcatct tgagttagtg aaatagttga gttttgatta tttatggata gtatattcat
     2821 ggctttttcc tataaatcat cataatattt tttacctgat gttggtctaa atgctgtacc
     2881 tccatcgtca gaatttttat ctcggataac tattgtccct gttttatcat cccaatacgc
     2941 agttctaccg cgaggtaact ctttcatatt tgttggatgg ctaacaatat tttcaatatg
     3001 ccgagcaaaa tctgctggtg aattgatatt taaatccgta aattcttgtt gtcttatgac
     3061 atgcttgtta taagcatgcc cactactaat ttgttctcca attagttgcg cttgtaaaga
     3121 cggttgtgtg gaagcatctg ctttgctgtt ggacgttata gatttaggcg gtctattccc
     3181 ccctgccatc tccccatcta cagtctgcat atggcgggca gcaggttttt tatagccggt
     3241 atttttaacc caatcccatt tggtcgggtt aagttctact tttttaccgc cccaaaccgt
     3301 agttgcggcc tctgctacgg caagggcagt ttgggctgtt gcagttatat tcggatgggc
     3361 atcagcccat tgtttggcag agttgatacc gtcttttacc gcaaaagcac tgtcttgtaa
     3421 tgcggttgca gccgcaagtt gtgcttcggg acttaaattt cctaaatgat taataccttg
     3481 tagagtctgc tgcgcggctg tatctgtgac cgggcttact gcactgtctg taattgcccc
     3541 aatccctact ccttgaaaac ccattaaaaa aggattaacc gcaccttgga cgatgccgcg
     3601 aacatcatcc atacggttag cccaccaatt tttattgggg tcgttttccc atatcagttt
     3661 tcctgcttca tcagcacagt taggattggc attgatgccc acccagtttc aggcagcctg
     3721 aaaaggattt ttaatatacg gcaaaaggtg ggcaacaagt gcccacctta cctagctaac
     3781 atttatccca agtatcatat atttttttaa gttctttatc caaagaaaga actttatttt
     3841 ttcaacacca tgaattatct caaaatctct acaatccacg catacgcctg aataaatttc
     3901 tcctacaatt gcttgaataa tatacaactc atctttatcg agactaattt taactgaact
     3961 ctcttcaaaa ttaattaatt tcatgaataa ttccttttat tttaattcgt catcaaaata
     4021 ccgtttgcct gtttttggtc taaatgctgt cccaccatct ttagtcttgg atatttagat
     4081 tataatcgtc aaattcccag tcaaaatatt ttgccaaatt tgatatagac ttatcttcag
     4141 acgttgaatt acatatttcc aatatatcat ttatcaattt taatatgtgt tcaatattaa
     4201 aacagtttgt aacaattgag ttttttaatg acatcggtct atgtatattt gaaagtaacc
     4261 attcagtgct atatatataa acataaaaat aatcagcacc attactttca tcaaaaccta
     4321 ttgataatgt caaaagtata caaaaatttt ctaacttgtc ttgtgggaaa tcttccaaat
     4381 caaagtcaga acaatcataa ttttttaatt ttaatctcat ataattacct aatatttaaa
     4441 tgtccatttt taattttatt cctttttcca tttgaatcaa tagtataagt ttcaaaattt
     4501 gcttgaatac ctgtagttgc aaattgtgaa tttttttctg ttggtggccg atattgtcga
     4561 gtgccatcta tacttaacca tccgcctcca ctagtttgtc ttgcaccctc accaacccaa
     4621 attttaccta gcctatctgc ctcttcataa gttgcagttc ctattggaaa atttttttca
     4681 ctcttatgaa gagctagact caatcttgga tcttgagccg caatgttttt taagttttgc
     4741 ccagttaatt gattaactaa ttgaggataa gttgcagcat tggcttttcc tccagacgtt
     4801 atagatttag gcgg
//
LOCUS       DAWKOX010000146         4782 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.146, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000146 DAWKOX010000000
VERSION     DAWKOX010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4782
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.146"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1..153)
                     /locus_tag="WJK78_001679"
                     /pseudo
     CDS             complement(1..153)
                     /locus_tag="WJK78_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(379..1098)
                     /locus_tag="WJK78_001680"
     CDS             complement(379..1098)
                     /locus_tag="WJK78_001680"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ7598577.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(1342..2196)
                     /locus_tag="WJK78_001681"
     CDS             complement(1342..2196)
                     /locus_tag="WJK78_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ7598578.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPATVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKKAVDYAA
                     EVAAAAKV"
     gene            complement(2325..3053)
                     /gene="rpsB"
                     /locus_tag="WJK78_001682"
     CDS             complement(2325..3053)
                     /gene="rpsB"
                     /locus_tag="WJK78_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ7598579.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQEAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(3226..3459)
                     /locus_tag="WJK78_001683"
     CDS             complement(3226..3459)
                     /locus_tag="WJK78_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598580.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFT
                     ITVRRRNHLMRQQEQAESEQQRAQRQKDSGTKP"
     gene            3537..4118
                     /locus_tag="WJK78_001684"
     CDS             3537..4118
                     /locus_tag="WJK78_001684"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ7598581.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINHLLKRYIKKGR
                     KIGVYWPMGKELRLDGFVRAAQKRGVKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     AKLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVGTLPREAHDLPLDGFVSEAGILCF"
     gene            4179..4769
                     /locus_tag="WJK78_001685"
     CDS             4179..4769
                     /locus_tag="WJK78_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ7598582.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         1031 a         1108 c         1394 g         1249 t
ORIGIN      
        1 gcttttttcg gtcagttgcc ggttaatcag tcccggcagt tcggacaggg tgttgtcttg
       61 cgccaacctg ttgcggtagc ggcataaggt gctgtaatcg gggatgcttg gtttgtcaaa
      121 acggcaaaac aggttgaaat cggtgcgggt gatgggtacg gcgttgccct tatgccgatt
      181 ttgtccgcct gctgcaaggc ggtttgtcta atgaaaggaa aaatgccgtc tgaacattgt
      241 tcagacggca ttttcaaatg gaaggcaata tagtcggcat atgaaaaatt gatgtataag
      301 gcaggatggg tttaggcttg ttaatttcca tataataaat ggccgtatga agcccatatg
      361 cgactatatc tgccggaatc agcagtgaac cagtgtaccc tcgttttcgc cggttaccac
      421 gcgtttgagc gagccttctt tagcgatacc gaatactacg atattgagct tgcgttcgcg
      481 gcagagggcg aaagcggtgg catccatcac tttaaggttt ttcaacaagg cttcgtcaaa
      541 agtaatggtt tcgtagcgtg ttgcagatgg gtcttttttc gggtctgcgg tgtacacacc
      601 gtcaacgttg gtggctttga gcatcacgtc gcagttcatt tctgcaccgc gcaatgcggc
      661 ggcagtgtcg gtcgtgaaga acggattacc ggtaccggcg gcgaaaatca cgactttgcc
      721 ttcttccaaa tattgaatgg ctttaggacg ggcgtaagtt tcggcgattt gctgcataga
      781 cagtgcggat tgtacgcgcg ctttgatgcc caaagtttca aatgcgtctt tgagtgccaa
      841 cgcgttcatt acggttgcca tcatgcccat gtagtcggcg gtggcgcggt ccatactgcc
      901 tgcttgtgca gatacgccac ggaaaatgtt accgccgccg acaacgatac cgacctgcac
      961 gcccatttta acgacttcgg caatttcgcc gacagtttga acgatggtat cgtgattgat
     1021 gccgaacgga tcggaaccca tcagggattc gccggagagt ttcagtaata cgcgtttgta
     1081 tttgatttgc tgtgtcatgg gatattctgc tttctcgttg gggatgttgc cggcttccgg
     1141 gcgggatgcc gtctgaaagg tgtatgcctt ggcagggcgt atgcggcgtg ccggcggtgt
     1201 gaaaacgggc tgctgaattt gccgccgctg ttttcgggcg gggcgggcat ttgaaccctg
     1261 ccgccggaaa atatgggcct ttcccaaaaa aaagcaccct gattcgtttg gaatccaggt
     1321 gctttctttt tcataagtgc cttacacttt ggcggcagcg gctacttctg ccgcgtaatc
     1381 gacggctttt ttctcgatac cgtcgcctac tttgtagcgg acgaagctga ccacttcagt
     1441 gccgttttct ttagcgaatt gggcaacagt ttggtcgggg ttcatcacga acgcttggcc
     1501 gttcagagtg atttcagcca agaatttgcg gatacggcct tcaaccattt tagcggcgat
     1561 gtcggcaggt ttgccggaag cgatagcttg ttcagtgtag atgtggcgtt ctttttcaac
     1621 ggtttcagca tctacttcgg cttcacttac gcattgtggt ttagcggcaa cgatgtgcat
     1681 accgattttg cgtgctacgt cttcagagcc tttgtactca accaatacgc cttcggtagc
     1741 caaagcaccg tggatgtagg caaccagttg gttggcagtg tcgatcactt ggaagcggcg
     1801 aacagacatg ttctcgccca atttagcgat gatggcttta cgttctgctt caaccagttc
     1861 gctcagttct tcaacggtag ccggtttttt ctcggcagcg gttttagcaa cgaagttggc
     1921 aaattctacg aagcccgcgt ctttggcaac gaagtcggtt tcgcagttta cttcgaccaa
     1981 tgcgccgaca ttgccgttga tggcgtaagc taatacgcct tcggcagcgg tacgaccggc
     2041 cagtttaccg gctttcgcgc cggatttgat gcgcaggatt tcttcggctt tgtcgaagtt
     2101 gccttcagct tcaaccaagg cttttttgca ttccatcatg cccaagccgg tagcggcgcg
     2161 cagatcggca accatttttg cagtaatttc tgccattttg aatctcctag atttttggga
     2221 aatacggaaa ggattttccg cattcgggaa tcgtgtgccg cgaacggacg ttcagacggc
     2281 atatttgaga aaaggggcat aacgcccctc ttctgtacac cgaattactc ggcagcagct
     2341 tcttgggcag cggctacagt ttcttgcagc gcttggtttt tgccttccaa aactgcgtcg
     2401 gcgatgccgc ggcagtacag gcggatggct ttggcggagt cgtcgttgcc ggggataacg
     2461 tatttcacgc cgtcagggct gttgttggta tcgactacgg cgataacggg gatgcccaat
     2521 ttctcagctt cgaccagagt acctttttgg tagccggtat cgataacgaa aatcgcgtca
     2581 ggcaggcctt tcatgttttt gataccgccc aaagaacgtt ccagtttttc aacgtcgcgt
     2641 tgcatttcca gaatttcttt tttgttgaaa ccgccttcag cagcgttttc cagggcagca
     2701 gttttttctt ccaggcgttt gatggattgc ttaacggttt tgtagttggt cagcatacca
     2761 cccaaccagc ggtaatcaac gaaaggcata ccggcacggg tagcttcttc gcggatgatg
     2821 tcgcgggctt ggcgtttggt acctacgaac aatactgtac ctttgttggc aaccagacga
     2881 cgtacggctt cttgcgcctc ttggaacatc ggcagggttt tttccaagtt tacgatatgg
     2941 attttgttgc gcgcaccgaa aatgtattgt gccattttcg ggttccagaa acgggtttgg
     3001 tggccgaagt gaacaccggc ttcaatcatc tgacgcatag taatttgaga cattttattt
     3061 ccttgaaagg gttaagagca cacattcaat cgcatagaac ttgataggtc acgcctattg
     3121 tcaagcaccc ttcggcgaaa gtgggcataa gttttaaaaa atagtgtgtt tccgaaatgg
     3181 aaaactgacg gattatagcg gataagatgc cgtctgaaaa gggattcagg gttttgtgcc
     3241 gctgtctttt tgccgttgtg cgcgctgctg ttcggattcc gcctgttcct gctgcctcat
     3301 caggtggttg cggcggcgga cggtaatggt gaaaaccgtg aacacggtgg gcagcaccgc
     3361 ccaaaaaacc aaataaatca aggcgcgcgc aatactcggc tgcgcggcgg aatacataac
     3421 ggcaacaaaa agatagccga tggcgacgat gtgccacatt gtgtgcgtcc tgtttgaatg
     3481 ttaacaaaat cgttataatc gcaacattct accgcaatcc tgaaaggccg tctgaaatga
     3541 ggaacgagga aaaacgcgcc ctgcgccgcg aattgcgcgg gcggcgttcg caaatggggc
     3601 gggacgtgcg ggcggcggca acggtaaaaa tcaaccacct gctcaaacgt tatattaaaa
     3661 aagggcggaa aatcggcgtg tattggccga tgggcaagga attgcgtttg gacggctttg
     3721 tccgcgcggc gcaaaaacgc ggtgtaaaac tttatctgcc ttatatcgaa ccgcgttcgc
     3781 ggcggatgtg gtttacgccg tatcctgaaa gcggaatgga acgggagcgc atacggggca
     3841 gggcgaagtt gaacgtgccg cagtttgcag ggcgcaaaat ccgcgtgcac ggtttgtcgg
     3901 tattgctcgt cccgcttgtc ggcatagacc gcgaaggcta ccgcttgggg caggcaggcg
     3961 gctattacga tgcgacgctt gcagcgatga aataccgttt gcaggcaaaa accgtgggcg
     4021 tgggctttgc ctgccaactg gtcggcacgc tgccgcgcga ggcgcacgac ctgccgctgg
     4081 acggttttgt gtcggaggcg gggatattgt gtttttagcc gttcagacgg catttcgggc
     4141 ggaaatgccg tctgaaggcg gaatattggg agaaaaggat gtcggaaaag ataatactgc
     4201 cggtcttgtc attgggcggc gttcggctcg aaccgttgga tgtgcatcat gaaacgggtt
     4261 tgcgcgaggc ggtttgcgat ggggaggttt ggaagctggg ggtaacgtcc gcgccccatc
     4321 cggatagggt ggcagactat atcgggacag cattggcaac gcgtttggcg tttgcggttg
     4381 tcgatgaaga ggcgggcagg gtggtcggga caacggcgta ttatcatttt gaaccgcaga
     4441 ttccgcgttt ggatatcgga ttcacatggt atgcggcatc ggcacggcgg acacggataa
     4501 acacctgttg caaaatcatg ctgttggatt acgcatttga tgttttggct tgccgttgcg
     4561 tgggatggcg cacggatatt ctgaaccttg cctcgcaacg tgccatcgaa cggctgggtg
     4621 cggaaaaaga cggcgtgctg cgtatgcata tgctccgtaa agacggcagt gtgcgcgata
     4681 cggtcgtgta cagtatgctg agggaagatt ggtgcaaaaa cagggaaatc ctgaccggca
     4741 ggttggcagg gtatggcgtg caggtgtgag gcagtatttt ca
//
LOCUS       DAWKOX010000147         4727 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.147, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000147 DAWKOX010000000
VERSION     DAWKOX010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.147"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            165..944
                     /gene="pgeF"
                     /locus_tag="WJK78_001686"
     CDS             165..944
                     /gene="pgeF"
                     /locus_tag="WJK78_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ7598583.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALGGTPDADAS
                     VDDTGKAACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            996..1475
                     /locus_tag="WJK78_001687"
     CDS             996..1475
                     /locus_tag="WJK78_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598584.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALR
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            1477..2475
                     /locus_tag="WJK78_001688"
     CDS             1477..2475
                     /locus_tag="WJK78_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ7598585.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHTVNIDEAQTAVANVARFDVFQLAGA
                     WMKGDVPRVCRLLDGLQEEGEEPVLLLWAVAEDVRTLIRLAAVLKQGQGVQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            2596..3015
                     /locus_tag="WJK78_001689"
     CDS             2596..3015
                     /locus_tag="WJK78_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598586.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            3091..3606
                     /locus_tag="WJK78_001690"
     CDS             3091..3606
                     /locus_tag="WJK78_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ7598587.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGAWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLYLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(3690..4574)
                     /locus_tag="WJK78_001691"
     CDS             complement(3690..4574)
                     /locus_tag="WJK78_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ7598588.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDTENSRQSLELNSDLVNQLAEINKNLR
                     KHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLVEAVGDINNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIDEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQAS
                     VELKVLIEQMREQVQNIE"
BASE COUNT         1050 a         1246 c         1322 g         1109 t
ORIGIN      
        1 taagggcatc attcctgcac cggcaagaat ccgaacccga acgtttgaaa acaatcccga
       61 atctccgaat tcccgcctgt gcgggaatga cgaaaaaaca aacatccatt tgccccgaag
      121 gcagttaatc aaccctttcc gccacacacc tattccaata tccaatgaaa accatcacag
      181 aaaccctaaa tcttgccccg aaaggcaaaa acttcctgac cgccgattgg cccgcgcccg
      241 ccaatgtgaa aaccctgatt accacgcgca acggcggcgt gagccaaggt gcgtatcaga
      301 gtttgaacct cggtacgcac gtcggcgaca atcccgaagc cgtgcgccgc aaccgcgaaa
      361 tcgtgcaaca gcaggtcgga ttgcccgttg cctacctcaa tcaaatccac agcaccatcg
      421 tcgtcaacgc tgccgaagcg ttaggcggca cgcccgatgc cgacgcttcc gtggacgaca
      481 cgggcaaggc cgcctgtgcc gtgatgaccg cagactgtct gcccgttcta ttttgcgaca
      541 gggcgggtac ggcggttgcc gccgcacacg cgggctggcg cggtttggcg ggcggcgtat
      601 tgcaaaacac cattgctgcg atgaaggttc cgcctgtcga aatgatggcg tatctcggcc
      661 ccgccatcag tgcggatgcg tttgaagtcg gacaggatgt gtttgatgcg ttctgcacgc
      721 ccatgcccga agccgccgcc gcatttgaag gcataggcgg cggcaaattc cttgccgacc
      781 tttacgcgct cgcccgcctg attctgaagc gcgaaggcgt gggcggcgta tacggcggca
      841 cgcattgtac ggttttggaa cgggatactt tcttttccta ccgccgcgac ggagcgacag
      901 ggcgtatggc gagcctgatt tggctggacg gcaatgccgt ctgaacacgc cgctgatata
      961 atctaccgac tttgtgcttt tgagaaaggc aagccatgaa caaactgttt cttactgccg
     1021 cagtgctgat gctgggcgcg tgcggtttcc acctgaaagg tgcagacggc atttctccgc
     1081 cgctgaccta ccggagctgg cacatcgaag gcggacaggc attgcggttt cctttggaaa
     1141 cagcgctgta tcaggcttcg ggcagggtgg acgatgctgc cggcgcgcag atgaccctgc
     1201 gtatagacag cgtttcccaa aacaaggaaa cctacaccgt tacccgtgcg gcagtcatca
     1261 acgaatatct tttgatattg acggttgaag cgcaggtatt gaaacgcggc gagccggtcg
     1321 gcaaaccgat gaccgtgtcc gtccgccgcg tccttgctta tgccgacaac gagatcttgg
     1381 gcaaacagga agaggaagcg gcattgtggg cggaaatgcg gcaggatgcc gccgaacaga
     1441 ttgtccgccg cctgaccttt ctgaaggcgg aatgacgtgg cggcacatat cggacgcatt
     1501 gatacggacg cgcctttgaa acccctgtac gtcatccacg gcgaggaaga actgttgcgt
     1561 atcgaggcat tggacgcatt gagggcggcg gcgaagaaac aaggttacct taatcgggaa
     1621 gtttatacgg cagacaatgc tttcgattgg aacgagctgc tgcaaaccgc aggcagtgcg
     1681 ggtctgtttg ccgatttgaa gctgttggaa ctgcatatcc ctaacggcaa gcccggcaaa
     1741 accggcggcg aggcgttgca ggattttgcc gcccgcctgc cggaagatac ggtaacgctg
     1801 gttttactgc ccaaactgga gaaaacccag ctccagtcca aatggtttgc cgcattggcg
     1861 gcaaaggggg aagtgtggga agccaaaccg gtcggcgcgg cggctttgcc ccaatggata
     1921 cgcggacggc tggacaaaat cggtttgggt atcggggcag acgcattggc actgtttgcc
     1981 gagcgcgtgg aaggcaatct gttggcggca cgtcaggaaa tcgacaagct cgcgctgctg
     2041 tatccgaaag ggcataccgt caatatcgat gaggcgcaaa ccgccgttgc caatgttgcc
     2101 cgctttgacg tttttcagct tgccggcgca tggatgaagg gcgatgtccc gcgcgtatgc
     2161 aggttgttgg acggattgca ggaggaaggc gaagaaccgg tactgcttct gtgggcggtt
     2221 gccgaagacg tgcggacgct gattcggctt gccgctgtcc tgaaacaggg gcagggtgtc
     2281 caatccgtac gcaacagtct cagactttgg ggcgacaagc agacgctcgc gccgcttgcg
     2341 gtcaagcgga tttccgtcgt ccgcctgctt gacgcgctca aaacctgcgc ccaaatcgac
     2401 cgaatcatca aaggcgcgga agacggcgac gcatggacgg tattcaaacg gcttgtcgtg
     2461 tcgctggcgg aataaagcgg taatccccaa aatccgaaaa tactgtaaaa taccgttaat
     2521 cctgaaaagt attcaccaat ccgtccgaaa acatttcaga cggcacgacc acctcaataa
     2581 aggaacatta accctatgga caataagacc aaactgcgct tgggcggcct gattttactg
     2641 accaccgccg ttttaagcct cattatcgta ttgattgtcg attcctggcc gcttgccatc
     2701 ctgcttgcag ccgtcattgt cgctgccgct gcgggcggtt ttgtttggac atcccgccga
     2761 cagcaacgcc agtttatcga acgcctgaaa aaattcgaca tcgatcccga aaaaggcaga
     2821 atcaacgagg caaacctgcg ccgtatgtac cacagcggcg gacaacacca gaaagatgcg
     2881 attaccctga tctgcctgtc gcaaaaatgt tcggtggacg aggcgcacgc tatgttcaaa
     2941 aaacgcccga cacgtcagga aatcaatcaa atggcggcaa aacagtcgcg cggtcagaaa
     3001 cgtccgcacc gttaaccgcc gcaaggcatc tttgcataaa tgccgtctga agcctgttgg
     3061 cgtttcagac ggcatattct gattgaaaag atgatgacac tgaaaaccgc cccgctcaaa
     3121 cgccgctttg ccgccatgct gtacgaaatg ctgctggtcg gtgcggcaac ctgtttggca
     3181 gcattgtttg ccggtattgc cgccattttt ctgaatcccg tttctatcgc ggtttctgca
     3241 ttggtaacaa gtatcctgat aatgggagca tggtggcttt atttccgcgc caactggcat
     3301 ggtcaggggc agaccttggc gatgaggaca tggaaaatcg gcttgtgcga ccttaacggc
     3361 atacagccgt ctttgtacct gctgcgcctg cgctttattt gggcgtgcat atttatcgta
     3421 tttatcccta tgttagccta tgccggattg cgccacttcc tcggcattcc gcccaagggc
     3481 gcggccggcg cggcattgat ttggctgatt ttaccgtggg ggttcgccct gctgaatccc
     3541 gatcggcagt ttctgtatga ttttcttgca ggaacaagat tagtggcggt caaaggaaag
     3601 ccttaagcct ttataccgca aaggtttcaa cctgaaaaaa tgccgtctga aagggctttc
     3661 agacggcatt tggttatcgg ggaaaccgat tattcgatat tctgcacttg ttcccgcatc
     3721 tgctcgatta agactttcag ttcgaccgag gcttgggtgc attcggcggc aatggatttg
     3781 ctgcccaaag tgttggcttc gcggtttaat tcctgcatca ggaaatccaa gcgttttccg
     3841 ctgctgcctt tgtgttcggt aacgatgcgg cgtacttcgt cgatatgcgt gcgcaggcgg
     3901 ctgaattctt cgtcgatgtc ggatttttga ataaagaggg caaattcctg ttgcagcctg
     3961 tcattattga tgtcgccgac tgcttcgacg aggcgggcgc ggattttttc tttatgtgtt
     4021 tccagcaggg taggaaagag ttcgctcaat gcatctatga tttcttccat gctttcgagg
     4081 cgttgtaaca ggtgctcgcc caattttttc ccttcgcgcc ggcgtgcggc agtaaagtct
     4141 tttaacgctt tttcggtcag ttcggtaatg ctttttgcca attcctccgt attttccctt
     4201 tggcttgcca atacgccggg gaaacgcagg atgtcggcaa cgcccagttt tgccaaatcg
     4261 tgatgcttgc ggaggttttt gttgatttcg gcaagctggt tcaccaaatc cgagttgagt
     4321 tccaaggact gtctgctgtt ttccgtatct tgaatttgga ttttgcattc gactttgccg
     4381 cgcgcgatat gggatgaaat tttctcgcgg ataccgcttt ccaaatagcg caaatcatcc
     4441 ggcatcctga tttgaatgtc caaaaagcgg tggttgacgg cgcggatgtc gaggttgatg
     4501 cgtttgctgc cgcactctgc cgccgcgttg gcaaagccgg tcatgctgtg gatgtggata
     4561 tttccgctgc tcatgtcgtt ctccgaagcc cgttaaaatg gaatcaatat atcacatctg
     4621 tatggcggca agcgttttcg ggtgtgaaaa attgaaggtt ttgcagcggc agattggaat
     4681 cacgctcttt tgttgctgca aggaagggaa atgtatagtg gattaac
//
LOCUS       DAWKOX010000148         4650 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.148, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000148 DAWKOX010000000
VERSION     DAWKOX010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.148"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..1889
                     /locus_tag="WJK78_001692"
     CDS             <1..1889
                     /locus_tag="WJK78_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ7598589.1"
                     /translation="LNVQKSTRFIGIKVGKSNYSKNELNETKLPVRVIAQTAKTRSGW
                     DTVLEGTEFKTTLFGADIQAGVGEKARADAKIILKGIVNRIQTEEKLESNSTVWQKQA
                     GSGSTVETLKLPSFEGPALPKLTAPGGYIADIPKGNLKTEIEKLAKQPEYAYLKQLQT
                     VKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVAAVTGGVGAGLIGAAQGTTSAAI
                     ANAAFTSLATQASISLVNNKGNVGKTLKELGRSRTVKNLVVAAATAGVSNKIGTSALA
                     NVSDKQWVNNMTVNLADAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIK
                     GLDQHYVAHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETLLDGRDPGSLNVKD
                     RAKIIAKAKLAAGAVAALSKGDVSTAANAAAVAVENNSLNDIQDRLLSGNYALCMSAG
                     GAESFCESYRPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRNGNVYFSVGKIWST
                     VKSTKSNISGVSVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEMISQTLVGESVGGS
                     LCLTRACFSVSSTISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIYIGNIKDIDKFISA
                     NIKK"
     gene            1939..2319
                     /locus_tag="WJK78_001693"
     CDS             1939..2319
                     /locus_tag="WJK78_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598590.1"
                     /translation="MSWVLVILIIGTFYDYYQIRQYAELEKKSISNILLYAQKEKFRL
                     ESKDKYMRGGYTKYEFIFSEYSNTTFLNFINDLKKDNYLPLDGYGHGFLCRKGESISI
                     NIYPEINKFILVWGYPENLCADSN"
     gene            2356..2766
                     /locus_tag="WJK78_001694"
     CDS             2356..2766
                     /locus_tag="WJK78_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ7598591.1"
                     /translation="MRKLNNHDVHKRYQDRLEEDVEFTINYELPLSCLWSTIKDFSSD
                     FEEKTEAFFILFKELLRRGHLKLQRDGQIIGHTPEEWEQIFREVWSEYEIEPNPLPGY
                     APFDIGMWLTVEAPAYAVWIDPEDGSELKYQCLE"
     gene            2869..3489
                     /locus_tag="WJK78_001695"
     CDS             2869..3489
                     /locus_tag="WJK78_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598592.1"
                     /translation="MLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYV
                     SKTKIKIGQIELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSVAKQNGFRVLSGGKY
                     GGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSEDWIRQVLDQLPD
                     GSPAKAAVFKANKNGTLKTAIAGVDRQTGKAVILPVKVPSKANIRR"
     gene            3492..4427
                     /locus_tag="WJK78_001696"
     CDS             3492..4427
                     /locus_tag="WJK78_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ7598593.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCLDSIDYVDERKGVP
                     LAAMQHIFMDVRAAASHAYLFEHDLKKFKQYAYVAGKLGVLLSVNSTDPEPFFFPCDM
                     LNIQNPMFLMLMSDSPQLREFLVRNIDNIANDTEAFINRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDQEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
BASE COUNT         1462 a          933 c         1100 g         1155 t
ORIGIN      
        1 aattgaatgt tcagaaaagt acccgtttca tcggcatcaa agtgggtaaa agcaattaca
       61 gcaaaaacga gctgaacgaa accaaactgc ccgtacgcgt tatcgcccaa acagccaaaa
      121 cccgttccgg ctgggatacc gtactcgaag gcaccgaatt caaaaccacc cttttcggag
      181 ccgacataca ggcaggggtg ggtgaaaaag cccgagccga tgcgaaaatt atcctaaaag
      241 gcatcgttaa ccgcatccaa accgaagaaa agctggaatc caactcgacc gtatggcaaa
      301 agcaggccgg aagcggcagc acggttgaaa cgctgaagct accgagcttt gaagggccgg
      361 cactgcctaa gctgaccgct cccggcggct atatcgccga catccccaaa ggcaacctca
      421 aaaccgaaat cgaaaagctg gccaaacagc ccgaatatgc ctatctgaaa cagcttcaga
      481 cggtcaagga cgtgaactgg aaccaagtac agctcgctta cgacaaatgg gactataaac
      541 aggaaggcct aaccggagcc ggagccgcaa ttatcgccct ggcagtagcg gcggtaaccg
      601 gaggagtagg cgcaggcctt atcggagcgg cacagggaac cacatctgcc gccatagcca
      661 atgcagcatt tacctcgctg gctacccaag cttccatttc gctggttaat aacaaaggca
      721 acgtcggcaa aaccctgaaa gaactgggca gaagccgtac ggtgaaaaat ctggtcgtgg
      781 ctgctgccac cgcaggcgta tccaacaaaa tcggcacgtc tgctttagcc aatgtcagcg
      841 acaagcagtg ggtcaacaac atgaccgtga atctggccga tgcgggcagt gccgcgctga
      901 ttaacaccgc cgttaacggc ggtagcctga aagacaattt ggaagcgaat atccttgcgg
      961 ctttggtgaa taccgcgcat ggggaggcgg cgagtaagat caaaggactg gatcagcact
     1021 atgtcgccca caaaatcgct catgccatag cgggctgtgc ggctgcagcg gcgaataagg
     1081 gcaagtgtca ggatggtgcg atcggcgctg cggtcggtga aatccttggc gaaaccctac
     1141 tggacggcag agaccctggc agcctgaatg tgaaggacag ggcaaaaatc attgctaagg
     1201 cgaagctggc agcaggggcg gttgcggcgt tgagtaaggg ggatgtgagt acggcggcga
     1261 atgcggctgc tgtggcggta gagaataatt ctttaaatga tatacaggat cgtttgttga
     1321 gtggaaatta tgctttatgt atgagtgcag gaggagcaga aagcttttgt gagtcttatc
     1381 gaccactggg cttgccacac tttgtaagtg tttcaggaga aatgaaatta cctaataaat
     1441 tcgggaatcg tatggttaat ggaaaattaa ttattaacac tagaaatggc aatgtatatt
     1501 tctctgtagg taaaatatgg agtactgtaa aatcaacaaa atcaaatata agtggggtat
     1561 ctgtcggttg ggttttaaat gtttccccta atgattattt aaaagaagca tctatgaatg
     1621 atttcagaaa tagtaatcaa aataaagcct atgcagaaat gatttcccag actttggtag
     1681 gtgagagtgt tggtggtagt ctttgtctga caagagcctg cttttcggta agttcaacaa
     1741 tatctaaatc taaatctcct tttaaagatt caaaaattat tggggaaatc ggtttgggaa
     1801 gtggtgttgc tgcaggagta gaaaaaacaa tatacatagg taacataaaa gatattgata
     1861 aatttattag tgcaaacata aaaaaatagg agttagtatg aaatatatga ttaattttct
     1921 aaaaaaacat ttgaattaat gagttgggta ttagtcatac taataattgg gacattttat
     1981 gactattatc aaataaggca atatgctgaa ttagaaaaga aatctatatc aaatatcttg
     2041 ctatatgccc aaaaagaaaa atttcgctta gagagtaaag ataaatacat gcgaggagga
     2101 tatacaaaat atgaatttat tttttcagaa tatagtaata ctactttttt aaacttcata
     2161 aatgacctga aaaaagataa ttatttacca cttgacggct atggacatgg ttttctatgt
     2221 agaaaaggag agtctatatc aatcaatata taccctgaaa ttaataaatt tattttagta
     2281 tggggatacc ctgaaaatct ttgcgctgat tctaattaag taagcaagaa taggttatag
     2341 ggaaataaaa ttcaaatgag aaaattgaat aatcacgatg ttcataaacg gtatcaagat
     2401 cgtttagaag aggatgtaga gttcactatc aactatgagc ttcctttgag ttgtttgtgg
     2461 tcaaccatca aagacttttc cagcgatttt gaggaaaaaa ctgaagcgtt ctttattctt
     2521 ttcaaagagc tgctgcgcag aggtcatctg aaactgcaac gcgacgggca aattatcggg
     2581 catacgcccg aagaatggga acaaatattt agggaagtat ggtctgaata tgaaatcgaa
     2641 cccaatccac ttcccggcta tgccccgttt gatattggaa tgtggcttac ggtcgaggct
     2701 cctgcctacg ccgtatggat agatcccgaa gacggtagcg aattaaaata ccaatgtttg
     2761 gaataaatcc cgtctgaaaa acagcttttt cagacaggat ttattccaat tatcggtgat
     2821 atacagagtt ttgtacaagc acagaccgct gccgatcacc tgtttgcttt gctgggtgtg
     2881 gttccgggta tcggtgaatc gatacaggcc tataaagtag cgaaagcggc aaaaaattta
     2941 caaggcatga aaaaagcctt ggacaaggca gcaaccgttg ccactgcaca gggctatgtc
     3001 agcaaaacca aaatcaaaat cggtcaaatt gaattaaggg ttactgcagc aactgacaaa
     3061 caattgctga aagctattgg cgaaggaagg gacacgacag gtaaaatgac cgagcagtta
     3121 tttgactctg tagctaaaca aaatggcttc agagtgcttt cgggcggcaa atacggcgga
     3181 aataacggtt ttgatcatgt atggcaggct gccgatggta gtgttgtttt gattgtagaa
     3241 agtaagcaga ttaggaacgg tacggtacag ctgaatccga atggtgcggg tggatatacg
     3301 caaatgagtg aggattggat tagacaagtt ttagatcaat tacccgatgg tagtcccgct
     3361 aaagctgctg tcttcaaagc aaataagaac ggcacattaa aaacagcaat agcaggcgtt
     3421 gatcgtcaaa caggtaaggc cgttattctt cctgtcaaag ttccttctaa agccaatata
     3481 aggagataac aatggggcac aatatgatga ccacccaaaa atggtatgag catattacta
     3541 atgtaatcat aggcaatact gctaatttca atagcggttg ccttgactct atagattatg
     3601 tagatgaaag aaaaggcgtt ccgcttgcag ctatgcaaca tattttcatg gacgttagag
     3661 ctgcagcttc ccatgcctat ctatttgaac atgatcttaa gaaattcaag caatatgctt
     3721 atgttgcagg aaagctgggg gttttgctga gtgtaaattc tacagaccct gaacccttct
     3781 tctttccctg tgacatgctc aacattcaaa atccgatgtt tctgatgctg atgagcgaca
     3841 gcccacagct gcgcgagttt ctggtgcgca atatcgacaa catcgccaac gatacagaag
     3901 cctttataaa ccgctacgac ctcaaccgtc atatgattta caatactctg ctgatggtag
     3961 agggtaagca gcttgatcgg ttgaaacaac gtagcgagaa agtcttggcg catcccaccc
     4021 ctagcaaatg gctgcaaaag cggttgtacg attaccgctt cttcctcgct ttcgccgaac
     4081 aggatgccga ggcaatgaaa gccgccttag agccgctttt cgataaaaaa accgcgcgta
     4141 tggctgccaa agaaacattg tcctatttcg atttctacct gcagccgcaa atcgttacct
     4201 acgccaaaat cgcatccatg cacggtttcg atttgggcat agatcaagaa atcgcaccga
     4261 gggatttgat tgtttacgat ccgctgccgg cagacgaata tcaagacatc ttcgatttta
     4321 tgaaacagta tgacttgtct tacccgtatg aatatctgca ggattggata gattactata
     4381 cgttcaaaac cgataagctg gtatttggta acgcgaagcg agagtgagcc gtaaaactct
     4441 gagctcctgt tttatagatt acaactttag gccgtcttaa agctgaaaga ttttcgaaag
     4501 ctataaattg aagcccttcc acagtacata gatctgtgtt gtggcggggc tttaccacgc
     4561 tgattgccgg agaagaactc aacctgctgg caaaacaagg catgagatct ttgcaataac
     4621 atgagttgag acctttgcaa aaaagccctt
//
LOCUS       DAWKOX010000149         4535 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.149, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000149 DAWKOX010000000
VERSION     DAWKOX010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4535
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.149"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(199..579)
                     /locus_tag="WJK78_001697"
     CDS             complement(199..579)
                     /locus_tag="WJK78_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ7598594.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDGGGRGHMPPVQNQAGTDDF
                     RAFSCENGLSVHVRRLDGGRIALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            1055..3136
                     /locus_tag="WJK78_001698"
     CDS             1055..3136
                     /locus_tag="WJK78_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ7598595.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            3126..3320
                     /locus_tag="WJK78_001699"
     CDS             3126..3320
                     /locus_tag="WJK78_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ7598596.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(3516..3707)
                     /locus_tag="WJK78_001700"
     CDS             complement(3516..3707)
                     /locus_tag="WJK78_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598597.1"
                     /translation="MDFQFFVETIRRQEKKLKHGVYRLFEIYSWLEDGKATKARIRYF
                     VKIEVDKQILRRIHRGIAD"
     gene            3836..4396
                     /locus_tag="WJK78_001701"
     CDS             3836..4396
                     /locus_tag="WJK78_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA large subunit pseudouridine synthase E"
                     /protein_id="HEZ7598598.1"
                     /translation="MKNLIAFNKPYGVICQFSPHEKHKSLKDFINFPGFYPAGRLDTD
                     SEGLLLLTDDGRLQAQITDPKFKHPKTYWAQLEGVPDESRLESLRKGIDLGGFVTRPA
                     SIRILKHGEADSLWERIPPIRVRKTVPDFWIEITISEGKNRQVRRMTAKAGYPCLRLI
                     RVASGRLKLFDLDLKPGEWAYAPFKP"
BASE COUNT         1085 a         1318 c         1092 g         1040 t
ORIGIN      
        1 tcattggata acagccctga agaaatcgga gcaggtttaa agttggcatt gagccgctgc
       61 cgataggata aacccggaac gaaacgaaaa ataatccgcc acgcccgaaa accgccgaaa
      121 ccagccgaca gccaaaacaa atccgacaca aaaaaccgcc cgaaaaatcc ggacggcggt
      181 tcaaacaggc tgccccgttt agcgggcgcg gcaggaagtt tcgaccgaat tgccgtaggc
      241 atcggtaaag ccgaaaaagg cttcgccgcc tttctggtgc cactcggttg cgtttccgaa
      301 caaaccgtgt tcggcggtat agcgttcgcc ggatgcggca acgtcggaag agaggacggc
      361 acgcctgccg tccaaccgca acgcgattct gccgccgtcc aaacggcgga cgtgcacaga
      421 caaaccgttc tcgcaggaaa acgcccgaaa atcgtccgtg ccggcttggt tttgaacagg
      481 cggcatatgc ccgcgtccgc cgccatcata cgcttccggc acggcacagg ccgccaaaga
      541 caaaaccggt acggtcagcg cgaaaaacct gatattcata aaagctcccc aataaaaata
      601 agatatgaaa caaccgccct gattccaagc tgcggcaacg ccatactata aacggacgcg
      661 caaacacaca agcccgataa ccggaattta cccgcgatga atcaataatc cggattgcgc
      721 gccccttctt tacccgtctt ccggcaccgc cttttgcctg acgatgccgt ccaaacccgc
      781 ctgtccgccc gaaggaatgt aaattttttc caaattccaa gtaaaaaccg ctatcagtgt
      841 gctaatttgc gttaaaatcc tattcggcgt ttaacgtttt gtgcgcccgc atccctgcac
      901 tgtttgatgc gggcataagg cacaaatccc gacaagcgca ctgtttcata cttcgtcaat
      961 cattcagact ccggtttgtg cccgtgccgg caggcggtca tccgtttccc gccgttcagg
     1021 catattccga cagtgtgaga taaggattta ttcgatgaaa tcactcaaaa ccttcctcat
     1081 ttggggcata gtggtactgg tcggcttagc atcctttacc actctggccc tcagccgagg
     1141 cgaacaggtc agcgcggtat ggatggtcac cgccgccata tccgtttact gcatcgccta
     1201 ccgtttttac agcctctaca tcgccaaccg cgtaatgcgg ctcgatccta accgcctgac
     1261 tccggcagaa cgccacaacg acggcttgga ctacgttccg acgcacaaag gcgtattgtt
     1321 cggacaccac tttgccgcga ttgcgggcgc gggccctttg gtcggcccgg ttttggcggc
     1381 gcaaatgggt tacctgcccg gtactttgtg gattatcttc ggcgtggtgt ttgccggcgc
     1441 ggtacaggat atgatggtct tgttcgtctc tatgcgccgc gacggtaagt ctttgggcga
     1501 tattgtgaaa caggaactcg gcactgtccc cggcgtgatt gcctccatcg gtattttgat
     1561 gattatggtc atcattatgg cggtgttggc gttgattgtc gtaaaagcac tggttcacag
     1621 cccttggggt acgtttacca tcgccgccac tatgccgatt gccctgttta tgggtattta
     1681 cacgcgctat atccgtccgg gcaaaatcgg cgagatttcc atcgtcggct ttattttgct
     1741 gatgctggcg gtaatttacg gcgaagatgt ggcgaaaagt tccatcggac attggttcga
     1801 ccttgacggc atccagctca cttgggcgat tatgatttac ggctttgtcg cctccgtatt
     1861 gcccgtatgg ctgctgctca ctccgcgcga ctatctctcc accttcctga aaatcggtac
     1921 gattgcggcc ttggctttgg gcatcgtcat cgtcaatccc actttgcaaa tgcctgccgt
     1981 aacccacttt atcgacggtt ccggcccggt attctcaggc gcattgttcc cgttcctctt
     2041 catcaccatc gcctgcggtg cggtttcggg cttccacgcg ctgatttcct ccggcaccac
     2101 gccgaaaatg ctggaaaacg aaacccacgt ccgtatgatt ggttacggcg gtatgttgat
     2161 ggaaagtttc gtagccatta tggcacttgc cgccgccgca tcgcttgatc ccggcgtgta
     2221 cttcgccatg aacagccctg ccgccctgat cggtacggat gccaataccg ccgccgaagt
     2281 gattaccacc aagctgcaat tccctgtcga tgctgcaacc ctgttgcaca ccgctaagga
     2341 agtgggcgaa aacaccatcc tttcccgtgc aggcggtgcg cccaccctcg cagtcggtat
     2401 ggcgcacatt atgagccgcc tgattccggg cgaggcgatg atggcgttct ggtatcactt
     2461 cgccctattg tttgaagcct tgttcatcct gaccgccgtc gatgccggta cgcgcgtcgc
     2521 acgttttatg attcaagact tgggcagcat cttctacaaa cctttcggca acaccgactc
     2581 catccccgcc aacctgattg cgaccttctt cgccgtggca ttgtggggct actttctcta
     2641 caccggcgta accgacccgc tgggcggcat caactcgctc tggcctttgt tcggcatcgc
     2701 caaccaaatg ctggcaggcg tagccttgat tatgtgcgcc gtggtgctga ttaagatgaa
     2761 acgcgaccgt tatgtctggg tggtactcgt tcccgccgtc ggcgtactgt tcgtaacctg
     2821 ctacgccggc ctgcaaaaac tgttccacag cgacccgcgc atcagcttcc ttgcccacgc
     2881 cggcaaatac agcgacgcat tggctaaaaa cgaagtcctt gcgcctgcca aagacatcgg
     2941 cgaaatggcg caaatcatct tcaacgacaa gattaatgcc ggtctgacca tcctcttctt
     3001 gtcggttgtc gtgattgtcg ccgcgtacgg tttgcgtacc gccctcaaag cacgcaaagt
     3061 cggctggccg accgccaaag aaatcccggc ggtgtaccgc gacggcaaac agccggaggc
     3121 acaaagtgaa gcataagctc gcgtcttggt ggaaaaccat caagctgacg gcaaacttga
     3181 tggcaggcgt gcccgattat gaaaactacg ttgcacagca gcgcaaacat aatcccaacg
     3241 cccccgtgat gaccaagctg cagtttcaag actattgccg caaacgccgc tgcggcgcaa
     3301 acggcggacg ctgctgttaa gcctgcttga aacaaattcc gtctgaacgc cgcttcagac
     3361 ggaattttta taatatagtg gattaacaaa aatcaggaca aggcgacgaa gccgcagaca
     3421 gtacaaatag tacgaaaccg attcacttgg tgcttcagca ccttagagaa tcgttctctt
     3481 tgagccaagg cgagacaacg acgtaccggt ttttgttaat ccgctatacc acgatgaatc
     3541 cttcgcaata tctgtttatc gacctcaatt ttgacaaaat accggatacg cgcctttgtt
     3601 gcttttccat cttccaacca actgtaaatc tcaaacagcc ggtacacgcc atgcttcagt
     3661 ttcttttcct gtcggcggat tgtttcgaca aagaattgaa aatccatttc atgcacctta
     3721 aaatttaatc tgcattcaaa ccttttcact ttggaagcac catttatcgg atgtcccttc
     3781 gcaataaaca aattttcccg ataccgccgc ccatttcaac ccaaacccaa aagctatgaa
     3841 aaacctcatc gccttcaaca aaccctatgg cgttatctgc caattttcac cgcacgaaaa
     3901 acacaaaagc ctcaaagact ttatcaattt tcccggcttc taccccgccg gacggctcga
     3961 caccgacagc gaggggctgc tgctgctgac cgacgacggc aggcttcagg cacaaattac
     4021 cgaccccaaa ttcaaacacc ctaaaaccta ctgggcgcaa ctggagggcg tacccgacga
     4081 aagccgattg gaaagcctaa gaaaagggat agacttaggc ggtttcgtta cccgtccggc
     4141 aagcatccgc atcttgaaac acggagaagc agattcgtta tgggagcgca tcccgccgat
     4201 acgcgtccgc aaaaccgttc ccgatttttg gattgaaatt accatttctg agggcaaaaa
     4261 ccgccaagtc aggcgaatga ccgccaaggc gggctatccc tgcctgcgtc tgatcagagt
     4321 ggcaagcggc agactgaaac tgtttgattt ggatttaaaa cccggggaat gggcatacgc
     4381 cccgtttaaa ccataatcac gtttatctca tcatttccac aaaagtggga atccggaatt
     4441 ttatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt acaaatagta
     4501 cgaaaccgat tcactcggtg cttcagcacc ttaga
//
LOCUS       DAWKOX010000150         4530 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.150, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000150 DAWKOX010000000
VERSION     DAWKOX010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4530
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.150"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(272..379)
                     /locus_tag="WJK78_001702"
                     /pseudo
     CDS             complement(272..379)
                     /locus_tag="WJK78_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(425..1153)
                     /gene="pdxJ"
                     /locus_tag="WJK78_001703"
     CDS             complement(425..1153)
                     /gene="pdxJ"
                     /locus_tag="WJK78_001703"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ7598599.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFTKILTDAGIRVSLFIDADDRQIQAARDVGAPVVELHTGAYADAR
                     SHAEQIRQFERIQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(1177..1968)
                     /gene="recO"
                     /locus_tag="WJK78_001704"
     CDS             complement(1177..1968)
                     /gene="recO"
                     /locus_tag="WJK78_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ7598600.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLK
                     LTVREDPLPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTI
                     AAGGTYLVRPETAVFPVGKGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(2002..3129)
                     /gene="pheA"
                     /locus_tag="WJK78_001705"
     CDS             complement(2002..3129)
                     /gene="pheA"
                     /locus_tag="WJK78_001705"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ7598601.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASSSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(3168..4400)
                     /locus_tag="WJK78_001706"
     CDS             complement(3168..4400)
                     /locus_tag="WJK78_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ7598602.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENGQSEYL"
BASE COUNT         1000 a         1308 c         1245 g          977 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta tattacataa tcatcgcctc aatatttaat
       61 atcccaaaat atagatttaa aaccatcgcc tttgtggttt gtcagcattc ctaattgaga
      121 tagaaagtca aataatttct tgtttctccg gctgccatca agatggttta gattaagacc
      181 tcgaacaata caatacccaa tactctgtac tgtattgtga atttcttcta tcaaactatt
      241 attgtttgca gataaaatat acttttgatt catatagtga attaaattta aaccagtacg
      301 gcgttggctt gccttgccgt actatttgta ctgtctgcgg cttcgccgcc ttgtcctgat
      361 ttaaatttaa tccactataa catatccctg tcgtgaaatg ctgtctgaaa gggtttgcct
      421 gcccttacgg cagcagcctt gccctgaaca tcgcctcctt catttggcgc acggcttcgg
      481 gcagtccgag gaagagggct tgggcaatca gcgaatgccc gatgttcagt tcgcggatgg
      541 cgaggatttg ggcgatgggg gtaacgttgt gtatggtcag tccgtgtccg gcgttgacga
      601 ccaagcccaa atctccggcg aaatgcgcgc cgttttggat gcgctcgaac tgcctgattt
      661 gttcggcgtg gctgcgcgcg tcggcatacg cgcctgtgtg cagctcgaca acgggcgcgc
      721 cgacatcacg ggcggcttgg atttgcctgt cgtcggcatc gataaacaaa gacacgcgta
      781 tgcccgcgtc ggtcaggatt ttggtgaatt cggcgatttt ttcctgttgc gccaatacgt
      841 ccaaaccgcc ttcggtcgtg atttcctgcc gtttttccgg cacgatgcac acgtcttccg
      901 gcatcacttt aagcgcgttt tcgagcattt cttccgtcaa cgccatttca aggttcaggc
      961 gcgtgcggat ggcgtttttg acagcaaaca cgtccgcgtc tttgatgtgg cggcggtctt
     1021 cgcgaaggtg catggtaatc aggtccgcac cgtgcgtttc ggcaaccagt gccgcctcca
     1081 cggggctggg ataagtcgtg ccgcgcgcgt tgcggacggt ggcgatgtgg tcgatgttga
     1141 cacctaaaag cataatcttt ccttttattt ctgccttcag acggcatttg aagccgtgcc
     1201 gtccgaagtc gggacggttt cccgggcggt ttctttgcgg tcaaactgcc gtatctgttc
     1261 caacacctgc cgcgatttca gcccctcggg caacaggtgg cggataaaaa gccgtgtgat
     1321 tttcaatgcc tgttgcaggc tttcggcggt gcggaaactg ccttcgcgca aatcgatcag
     1381 gctctgcccg ggggcgacaa cgccggcggc gtgcggcggt acggcaaatc cttttccgac
     1441 ggggaagacg gctgtttccg ggcggacaag gtatgtgccg cctgccgcaa tcgtcccgcc
     1501 gtccccgtcg cggttcaaat cgggggcaac gcccaacagg ttcagcagcc gccactcgaa
     1561 acggcgcaag tcgtcgatat aagcggcttt gcagcacacc gcctccatca cttccgccaa
     1621 cgcgtcgtat aactcgggca acggatcttc gcggacggtc aacttcagca tcaactcgtt
     1681 cacatacaat ccgctgaaca acgccctacc ctgcggctgc ggccacccgc ctatccattc
     1741 ggcgcgatgt agggtcttca actcttgcga accataccaa gacgcactca ccggcacaaa
     1801 cggcaccaac acgccgcgca attcgctctg ccgtttgcgc gcgcttcttg ccaaaagtgc
     1861 cacacgcccg taacggcggc tgaacgcttc gacccgcagg ctgctttcgc gccagggcga
     1921 ggaagccaac aggaagacgg gttcgtggtt gactcggtgt tcggacatca tgcctgaaat
     1981 gccgtctgaa cgctgccgcc gctacaaaac ggcggtcggg tacgaaccga tgactttgac
     2041 gaacgaagcg cgttcgccca agcgttccaa tgccgtctga atctgcgcgt cccggcggtg
     2101 tccttcgatg tcgatgaaga acaggtattc ccacaaaacg gatttactcg gacggctctc
     2161 aaacttggtc atggaaatac ccgactcagt cagcggttgc agcagcgagg caaccgcgcc
     2221 tgcccggttg ggcgcggaaa cggccagcga agtcttgtcg ctgctgcttg caccggtttc
     2281 gtgatgtccc atcaccaaga agcgcgtggt gttgttcggt tcgtcttcga tgcactcggc
     2341 aaccatatcg agtccgtaga tttccgccgc cgtgcgtccg gcgatggcgg caaccgtacc
     2401 gtcgtccgat tcggcaacca gccttgcggc ttcggcattg ctggacacgg caatccgttc
     2461 ggcgttgggc aggtgtctgc ccaaccagtc gttgcactgc gccaacgcct gcgcgtggga
     2521 aaagactttg gcaatgcctt cggtgctgcc gttgttttta cgcaaaaggt tgtggtggat
     2581 gcgcaaaacg acttcgccgc acgcctgcaa cgcggtaacg gcaagcaaat ccaacgtgcg
     2641 cccgaccgag ccttcggtcg agttttccac gggggcgacc agatagtctg cctgacgggt
     2701 ttcaacctgc ttgaagcagt tgtctatggt cggacacgcc atggtgtgcg cggcgtgtcc
     2761 gaaatgctta atcgccgcct gctgggtaaa cgtgccctgc ggccccagat aggcgatggt
     2821 cagcgggcgt tctacggcga ggcactcgct catcacttcc cgaaacaggc gtgctaccga
     2881 ttcgtcgggc agcgggcctt tgttcaaatc ctgaatgcgg cgcaacacgg cgacttcgcg
     2941 ttcgggacgg tacactgcgc ccgtgccttt cagttcgccg atggcgtgtg cgtgttgcgc
     3001 gcgttcgttg agcaggcgca ggatttccgc atcaatggtg tcgatggcgt tgcggtgggg
     3061 aaggaggagt tcgtcgatag tttgggacat aatttcgcct gaacagtaat ttatcgtgca
     3121 ttctaacatc aaatgccgtc tgaaacggtt tcagacggca ttttccgtta aaggtattcg
     3181 ctttgcccgt tttctttcca cgcacgatgc gagcagagcc acagaagcgc aatgccgcaa
     3241 gaggtggacg cggtcatcgt tgccgccatc acggttgccg aaccgtcgtg caagaaggtc
     3301 gccgccatac ccacccccgc gccgattaaa gattggaata cacccaatac ggcgtttgcg
     3361 ctgccgccct cttctttgaa ataggacata aaacacgcct gcgtgtttgc accgaccaag
     3421 ccctgcgtac cgacggaaaa catcacgcac gcgaccagca gccaaaacgg gggcaacccg
     3481 aaaaacagca cggcggcgag ttgggacagg ttggcggcaa actggacgac aatcccccat
     3541 agcaggatgc tttgcggatg cacgccggtt ttgagccgcc acgcggtaac gcggttgaaa
     3601 aacatcatcg tgatgatgtt tagtgcaaac gcccaagcgt attgatgagg cgtaacacgg
     3661 tagagctgct ggtacacgaa ggaagattcg gtcagaaagg cgaacatcga accgaagctg
     3721 aatgcctgaa aaaacagata acccatcgcg gcacgggttt tcaatacgcg cttgaaccgc
     3781 cccgccacca gcccgaacac gtcccgtccg attttgccgc cgacggcggg cttgggcagg
     3841 aaatactgta ccaaaccgag cagcaccagc gaatacgccg ccagaaaaac aaaaatcgcc
     3901 tgccagccac ccaagccctg caacaatgcg ccgaccatgg gtgcgaccag cggcacaacc
     3961 atcaaaatga tgccgataag ggcaaacatc tgggcggctt tgcgtccgga ataataatcg
     4021 cgcaccattg cgccgacgat gaccacagtc atgcccgcac cgaatgcctg cacgacgcgc
     4081 aggttgagga gctgttcggc actcgaagca aatacgatgg cggcaacggc aaggcagtag
     4141 acggccagtc cggtcagcgc gacgggtttg cgccctttga tgtcggacac cgaaccgccg
     4201 accacctgtc cgaacgccgt gccgaacata aacaaactca aactctgttc gatgcggtga
     4261 acatccgcgt tcagcgattg cgccatttcg ggaatcgcgg gcaggtaggc atcgatggaa
     4321 aacggcatca gcgtaaccag catcgccatc aaaaccgcca tcagtttttc gctcatttca
     4381 ggataatggg cagaaggcat aaattctcgt ccgattcgca aacaaaccgc ccggcggcgg
     4441 aaaacacaat acgcggaaac ggaaaatttt aacacaccgg cacaaacagg cggcaacaaa
     4501 agccccggca aaaccggacg aaccggaacg
//
LOCUS       DAWKOX010000151         4494 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.151, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000151 DAWKOX010000000
VERSION     DAWKOX010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4494
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.151"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(98..1036)
                     /locus_tag="WJK78_001707"
     CDS             complement(98..1036)
                     /locus_tag="WJK78_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7598603.1"
                     /translation="MLELNGLCKRFGNKTVADDICLTVGRSKILAVLGRSGCGKSTLL
                     NMIAGIIRPDGGEIRLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAESLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVAHLMGLPNTDDDRHIPQHAVRFDQDGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMRHAGAVSGKDTVRIHIEEREIVRFR"
     gene            complement(1045..1920)
                     /locus_tag="WJK78_001708"
     CDS             complement(1045..1920)
                     /locus_tag="WJK78_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ7598604.1"
                     /translation="MPTVRFTESVSKQDLDALFEWAKASYGAKSCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWTDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNTAAGGVSSGELPSETVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAILPETFLPENQDGEVACFEKMDIGGLLDAMLSENMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2109..2185)
                     /locus_tag="WJK78_001709"
     tRNA            complement(2109..2185)
                     /locus_tag="WJK78_001709"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2149..2151),aa:Met,seq:cat)
     regulatory      2335..2434
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2527..4428
                     /gene="thiC"
                     /locus_tag="WJK78_001710"
     CDS             2527..4428
                     /gene="thiC"
                     /locus_tag="WJK78_001710"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ7598605.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTRPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1082 a         1286 c         1190 g          936 t
ORIGIN      
        1 ttcggataaa ttttgcagcc ctgataaaaa atatggctgc tttggtaaaa aaatgccgtc
       61 tgaaaggttt tcagacggca tttgttttta agaagcatca gcggaagcgg acgatttccc
      121 gttcttcgat atggatgcgt accgtatcct tgcccgatac cgccccggcg tgccgcatat
      181 cgaggttcag ccataggatg ccgtgttccg gatggaggac ggacaggctg aacgattcgg
      241 gcaaacaggt acgggataat acgcggcact ccatgccgtc ttggtcgaaa cgcaccgcat
      301 gttgcggaat atggcggtca tcgtcggtat tgggcagccc catcagatgg gcgacctgca
      361 cgccggcagg cgtttgaacc aaggtttcgg gcgtaccgca ttgaaggatt ttcccctcgt
      421 gcatgacggc gatttcgtct gccgccgtgc aggcctcttc gggcgaatgc gttaccaaaa
      481 cggcagggat gccgcccttg cggatacgtt cggcagtcat gcggcgcagc cggtcgcgca
      541 aatgcgtgtc caaactggaa aacgattcgt ccaacagcag cagggaaggg cggacaacca
      601 aagcgcgcgc cagtgccaac cgttgctttt cgcctccgga aagtttttca ggcttgcggt
      661 gcgcctcgtt ttccagtccg acttcggcaa gtgccgccat ggcgaggctt tcggcttcgg
      721 ctttcggcat tttttgcatt ttcaaaccga atgccgcatt ttccagtgca ctcatatggg
      781 gaaacagcgc gtaatcttga aacatcagcg aaatacggcg tttttcgggc ggcatacggg
      841 taatgttttc cccgttcagc cgaatttcgc cgccgtccgg acggataatc cccgcaatca
      901 tattcagcag ggtggatttt ccgcagcccg accgtcccaa aacggcaagt attttgctgc
      961 ggccgacagt caggcagatg tcgtcggcga cggttttatt gccgaagcgt ttgcagagtc
     1021 cgttcagttc aagcatggcg tatcctataa acgtatgccg tccagccact cggacagcgg
     1081 atgggcggca tcaatcagac cgtaacggca aaacgcgtcc agcgtaacca gttgcgcgtc
     1141 gtgcatcatg ttttccgaca acatggcatc caacagaccg ccgatgtcca tcttttcaaa
     1201 acacgcaacc tcgccgtcct gattttcagg caggaaggtt tcgggcagga tggcatcgaa
     1261 tacatacagg atttcattgt gcacaccccg gctgacgggg cgcaggctgt gcagccgaga
     1321 taccggacgg ataaacggga acagcgtttt atccaaaccg gcttcttcgc tgctttcgcg
     1381 acacacggtt tcagacggca attcaccgct ggaaacaccg ccggcggcag tattgtcgag
     1441 tttgtcggga tcgactgctt tgtgcggact gcgcctgcct atccagaaat gccatcggcc
     1501 gtccgattcg gtcagaccgt tgagatggac ggcgcggctg agtagtccga acgggcggaa
     1561 agcggcgcgt tcgagcgtga acaaggggtt gccgccgccg tcggtcaggt cgaaacactc
     1621 gttgcgccag ccgtgaagca gccccgcctt gttccatgtg cgggcgaggt gctgcaagcg
     1681 tccgcccata tccgtccagc cgtccgcatt cagaaaaatg ccgtctgaag actccgagca
     1741 gcctgcctcc cagtcttttt tgacgcgctc cgcccattcc ggcgacagat tgcccaaagg
     1801 cagacggttc agatacagcg ttttccagca actttttgca ccgtaacttg cttttgccca
     1861 ctcgaacagg gcatcaaggt cttgtttgct gacggattcg gtaaaacgga cggtcggcat
     1921 agtcggcttt cttgaacata atgcggaaga ttgtagccaa accgcctgaa tttgcaaccg
     1981 caaacagacg gcgggctgcc gttccgatat tgcggcagga aggaaaatcc ggcaaaaaac
     2041 ggaggcggca ggaaacagga aacaggcaaa acaaaacccc tcggcattga accgaggggt
     2101 ttaatatttg gttgcgggag caggattcga acctacgacc ttcgggttat gagcccgacg
     2161 agctaccatg ctgctccatc ccgcgtcaga agatggaact atacggcaga ttttttatgt
     2221 tgtcaaacat tatttccgcg aaaaatcata aaattttgcc gtccggcggt ttatgcctga
     2281 tttgaaatat cattttcttt acaaaagttc atgttcgtga tttaattttg gttaacattg
     2341 aaacaggggt gctgcatgat gttcaggcgg ctgagaaata ccctttacac ccgatctgga
     2401 taatacctgc gtggggagtt ttcacggatt ctgcctttca gacggcattt tttgatactc
     2461 gggccgtttg aaaaagcaaa gtgctcctgt ttctttattc taaacgagaa aacaggagca
     2521 ttttttatga ctacgccaaa aaaaactgcc aaaacttccg gcaacgaagc gcgcgaactt
     2581 gccgacttga gcgaagacat cggcatccgc ttcaaatatc cgaactcgga gcgcgtgtat
     2641 ctgcaaggca gccgcgacga catccgcgtg cctttgcgcg aaatccgtca ggacgacacc
     2701 tacacggcgc aaggcacgga agccaacccg ccgattcccg tctatgacac cagcggcgtg
     2761 tacggcgatc cggcggcgca catcgacctg aaacaaggtc tgccgcacat ccgcacggcg
     2821 tggctggacg aacgcggtga taccgaaatc ctgcccaagc tttccagcga atacggcatc
     2881 gaacgcgcac acgatccgaa aaccgcccat ctgcgcttca accaaatcac ccgcccgcgc
     2941 cgcgccaaag ccggccgcaa cgtaacccag ctccattacg cccggcaagg cattatcacg
     3001 ccggaaatgg aatttgtcgc catacgcgaa cgtttgaaat tagacgaatt gtcccaaaaa
     3061 ccggaatacg ccaaactctt gaagcaacac gcggggcaaa gtttcggcgc gaacatcccg
     3121 acccgtcccg atcaaatcac acccgaattc gtgcgccggg aaatcgccgc cggacgtgcg
     3181 attattcccg ccaacatcaa ccatcccgaa ctcgaaccga tgattatcgg ccgcaacttc
     3241 cgcgtcaaaa tcaacggcaa cttgggcaat tccgccgtca cttccagcct gaccgaagaa
     3301 gtcgaaaaaa tggtgtggtc gctgcgttgg ggcgcggaca caattatgga cttatccaca
     3361 ggcgcgcaca tccatgaaac gcgcgaatgg attatccgca acgcgcccgt ccccatcggc
     3421 accgtgccta tttatcaggc tttggaaaaa accggcggca ttgccgaaga tttgacttgg
     3481 gatttgttcc gcgacacctt aatcgagcag gcggaacaag gcgtggacta tttcaccata
     3541 cacgcgggcg tgttgctgcg ttatgtaccg atgaccgcca accgcctcac cggcatcgtc
     3601 tcgcgcggcg gttcgattat ggcgaaatgg tgtttggcac atcatcggga aaacttcctc
     3661 tacacgcatt tcgacgaaat ctgcgaaatc atgaaagcgt atgatgtgtc gttcagcctc
     3721 ggcgacggcc tgcgccccgg ctgcattgcc gatgccaacg acgaatccca attcgccgag
     3781 ctgcacacct tgggcgaatt gaccgataaa gcgtggaaac atgacgtaca agtcatgatc
     3841 gaaggccccg gccatgtgcc gctgcaacgc gtcaaagaaa acatgaccga agagctgcaa
     3901 cactgctttg aagcaccttt ttacacactc ggcccgctcg ttaccgacat cgcacccggc
     3961 tacgaccaca tcacctcggg cataggcgcg gccaatatcg gctggtacgg cacggcgatg
     4021 ctttgttacg ttacccccaa agaacatttg gggctgcccg acaaagaaga cgtgcgcacc
     4081 ggcatcatca cctacaaact cgccgcccac gccgccgatc tcgccaaagg ctggccgggc
     4141 gcacaattac gtgacaacgc cctgagcaag gcgcgtttcg agttccgttg gcgcgaccaa
     4201 tttcgcttaa gccttgaccc tgaacgtgcc gagagcttcc acgacgaaac cctgcctgcc
     4261 gaaggcgcga aaatcgccca cttctgctca atgtgcggcc ccaaattctg ctcgatgaaa
     4321 atcacgcagg aagtgcgcga ctacgccgac aagcaaaaag cccaacggca gggcatggag
     4381 gaaaaagcgg tcgagttcgt caaaaaaggc gcgaagattt acagttgaaa cgtcaagcaa
     4441 aaaatgccgt ctgaaacccg gaaaaaaggc ttcagacggc attctttcgc ttgt
//
LOCUS       DAWKOX010000152         4491 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.152, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000152 DAWKOX010000000
VERSION     DAWKOX010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4491
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.152"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            66..260
                     /locus_tag="WJK78_001711"
     CDS             66..260
                     /locus_tag="WJK78_001711"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598606.1"
                     /translation="MENAAASPAGRFRRHSRRRKCPTLKAQTHTKPYACTCNNPTDTA
                     VFSKPFASFTHPPRDAAATI"
     gene            431..955
                     /gene="nspA"
                     /locus_tag="WJK78_001712"
     CDS             431..955
                     /gene="nspA"
                     /locus_tag="WJK78_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ7598607.1"
                     /translation="MKKALAALIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGMRVKF"
     gene            1091..1480
                     /locus_tag="WJK78_001713"
     CDS             1091..1480
                     /locus_tag="WJK78_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ7598608.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1558..2388
                     /locus_tag="WJK78_001714"
     CDS             1558..2388
                     /locus_tag="WJK78_001714"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ7598609.1"
                     /translation="MAHYAIGDIQGCFDELTSLLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2403..3860
                     /locus_tag="WJK78_001715"
     CDS             2403..3860
                     /locus_tag="WJK78_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ7598610.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSYIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3901..4290)
                     /locus_tag="WJK78_001716"
     CDS             complement(3901..4290)
                     /locus_tag="WJK78_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598611.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
BASE COUNT         1069 a         1446 c         1000 g          976 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaacc gtatgcctgc acctgcaaca
      181 atccgacaga taccgctgtt ttttccaaac cgtttgcaag tttcacccat ccgccgcgtg
      241 atgccgccgc caccatttaa aggcaacgcg cgggttaacg gctttgccgt cggcaaagca
      301 gccggatacc gctacgtatc ttgaagtatt gaaaatatta cgatgcaaaa agaaaattta
      361 agtataatac agcaggattc tttaacggat tcttaacaat ttttctaact gaccataaag
      421 gaaccaaaat atgaaaaaag cacttgccgc actgattgcc ctcgctctcc cggccgccgc
      481 actggcggaa ggcgcatccg gcttttacgt ccaagccgat gccgcacacg caaaagcctc
      541 aagctcttta ggttctgcca aaggcttcag cccgcgcatc tccgcaggct accgcatcaa
      601 cgacctccgc ttcgccgtcg attacacgcg ctacaaaaac tataaagccc catccaccga
      661 tttcaaactt tacagcatcg gcgcgtccgc catttacgac ttcgacaccc aatcgcccgt
      721 caaaccgtat ctcggcgcgc gcttgagcct caaccgcgcc tccgtcgact tgggcggcag
      781 cgacagcttc agccaaacct ccaccggcct cggcgtattg gcgggcgtaa gctatgccgt
      841 taccccgaat gtcgatttgg atgccggcta ccgctacaac tacatcggca aagtcaacac
      901 tgtcaaaaac gtccgttccg gcgaactgtc cgccggtatg cgcgtcaaat tctgatatgc
      961 gccttattct gcaaaccgcc gagccttcgg cggttttgtt ttctgccacc gcaactacac
     1021 aagccggcgg ttttgtacga taatcccgaa tgctgcggct tctgccgccc tattttttga
     1081 ggaatccgaa atgtccaaaa ccatcatcca caccgacaaa gcccccgccg ccatcggcgc
     1141 gtacagccaa gccgtccgag caggcgacac cgtttacatg agcggtcaaa tccccctcga
     1201 tcccgccacg atgaccgtcg tcggcaacgg cgatttccgc gccgaagcgc gccaagtgtt
     1261 ccaaaacctg caagccgtcg ccgaagcggc aggcggcacg ctggccgaca tcgtcaaact
     1321 caacgcctac ctgaccgact tgggcaattt tgccgtcttc aacgaagtca tggcggaatt
     1381 tatcgccgag cccttccccg cccgcgccgc cgtcggcgtt gcctcgctgc ccaaaggcgt
     1441 gcaggtcgaa gccgaagccg tcctcgtttt gaacgcataa ttccacgttc ggactgcatg
     1501 atatttcaaa accatgccgt ccgaaccgca acactttccc acttcacaac atctgcaatg
     1561 gcacattacg caatcggcga catacaaggc tgtttcgacg aactgacctc actgctcggc
     1621 aaaatcggct tcaaccacgg cacggacacc ctctggctga cgggtgatat cgtcaaccgc
     1681 ggcccgaaat ccctcgaaac gctgcaattc tgcatccggc acgaaaacag cgtgcaaatc
     1741 gtcctcggca accacgacct gcacctgctc gctgtcggct gcggcgaagg cgcgcccaaa
     1801 cgcagcgaca caatcgaacc catactcaaa caccccgacg gaaaaaaaat gctcgactgg
     1861 ctgcgtgcgc aaccgctgtt gatacgcgag ggcagccgcg tgatggtaca cgccggcatc
     1921 ctgccgcaat ggcgcatcgc caaagccgaa tcgctcgcta gagaagccga agccgaactg
     1981 cgcggcaaaa aatacgtcaa attcttctcc aaaatgtacg gcaacaaacc ggccgcgtgg
     2041 gacgaaggtt tggaaggcta tgcccgcctg cgcttcatcg tcaacgcctt cacgcggatg
     2101 cgcgccctga cctttaaaaa cgaactggat ttcgactaca aatccacagt gaaaaaaatg
     2161 ccgccttacc tgcgcccgtg gttcaaagcc cccgaccggc aaaacctcga ccgcaccatc
     2221 atcttcggac actggtcctc gctgggctac acgaatgccg acaacgtcat ctcgctggac
     2281 accggcgcgc tgtggggcgg acagctgacc gccgtcaacc tcgaaacgga agaaattacc
     2341 caagtccaag ccgccggcgg catagactgg aaaagcttcg caaaataacg gaccgcccca
     2401 ctatgcacaa aatcctgccc atcgcccacg tcctctcccg actgggtatg ctgttttcct
     2461 ttatcctgct gatacccgcc gccctctcct acgccttttc ggacggcgcg tacaccgcct
     2521 tcgccaccac cgcgaccgtt accctttccg gctcgtacat cgtccggctc gccaccctcc
     2581 ggttcaggcg cgaactgcgc ccgcgcgacg gcttcaccct cgtcctgatg ttgtggctgg
     2641 cgtttgccgc tatggctgcg atgccgatgt acctgtattt cccgaatatg ggctttaccg
     2701 acgcattttt tgaatcgatg tcgggactga ccaccaccgg cgcgaccgtc atcccccacg
     2761 tcgacgggct cgccccctcc gtcaactttt ggcggcatat gctcaactgg ctgggcggga
     2821 tgggcatcat cgtccttgcc gtcgccatcc tgcctatgct cggcgtaggc ggcacgcaat
     2881 tattcaaagc cgaaatcccc ggcattgaca aagaaagcaa aatgtcgccg cgcatttccc
     2941 aagtggcgaa aaaactctgg ttcggctaca ccctgatcac catcctcgcg gcagcctgcc
     3001 tgcattttgc cgggatgggc tggttcgatg ccgtctgtca cgcgatggcg accctctcgc
     3061 tgggcgggtt ttccacccac gatgccagca tagcttatta caactccccc ctcatcgaag
     3121 cggtcatcat cgttttcacc attgtcggcg gcatcaattt tgccaaccat ttcgccgccc
     3181 tcaacagccg cagcctcaaa acctattgga aagacgaaga atgccggacg atgctgctgc
     3241 tgctctccgg cagcatcctt gccgccgccc tgtacctgtg gcacaccggc tattacgccg
     3301 gttttaccga atccctgcgc tacaccgcct tcaacttcgt ctccatcgga ctggcaaacg
     3361 ggctggccaa caccgacttc gcacaatggc cgctcctgat ttccctgtgg atgtttttcc
     3421 tcgccaacat cctcgccaac tccggctcga ccggcggcgg catcaaaacc atacgcgccc
     3481 tcgtcctgtt caaattcagc ctgcgcgaaa tgatggtgct gctgcacccc aaagccgtcc
     3541 gcaccgtcaa aatcagcggc aaggccatac ccgaccgcct cgcgctgacc gttatgtcct
     3601 tcatcttcat ctactttatg accgtcgtcc tcttcagctt cctgctgatg gcgagcggta
     3661 tggaatttac caccgccttc accgccgtca tcgcctgcat caccaacgcc ggccccggcc
     3721 tgggcgaagt cgggcccgcc ggcaattacg ccggtttgga cgtgatgcag aaatggatct
     3781 gtgttaccgc catgctcttg ggcaggctgg aaatcttcac cgtcttcatc ctcttcaccc
     3841 ccgcctactg gaagaaataa aaaatgccgt ctgaaaactt ttcagacggc atattgtctt
     3901 ttaaaaaagc ggaagctcta caaaaggaaa gaaatgctga aacctctgat aaatttcagg
     3961 atatttctct aaggctttta atgctttttc ttttgaaata ggcggatcat agacatctat
     4021 cccccttaag aaggcaatgc ccgttaatgc atttttttga tcatttgaaa tgtaaccata
     4081 attaacgact ccaattacat cataaatttc ccctatactc ttatcaaaat caatcaaatc
     4141 aaaaatatac aatggaattg tatcaatagg agtatctctg acaactatat ccaaccataa
     4201 tttaaattca gaaagattaa tagcatcata gaacatacag actattgcaa atcctaaatc
     4261 ttcacaattt tctttactaa ttttccacat aattatttac ctttatccat tgcttcccaa
     4321 ccgatacatc cggtatttta gattctcctt tgccgtcaaa cgctctttta gttatccgct
     4381 ttatatcaaa aatgccgtct gaacggcgga cggtctttca gacggcattt tgactgttta
     4441 aagcggaggc agctctacaa acggaaagaa atgctgaaat ttctgataaa t
//
LOCUS       DAWKOX010000153         4462 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.153, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000153 DAWKOX010000000
VERSION     DAWKOX010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4462
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.153"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1017..1787)
                     /gene="xth"
                     /locus_tag="WJK78_001717"
     CDS             complement(1017..1787)
                     /gene="xth"
                     /locus_tag="WJK78_001717"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ7598612.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(1847..2128)
                     /locus_tag="WJK78_001718"
     CDS             complement(1847..2128)
                     /locus_tag="WJK78_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ7598613.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSNHLNRLRVEGLVDFTRYHRIIEYRLVSEEAAAILHTVRDLENKRVA"
     gene            complement(2534..3415)
                     /gene="nadC"
                     /locus_tag="WJK78_001719"
     CDS             complement(2534..3415)
                     /gene="nadC"
                     /locus_tag="WJK78_001719"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ7598614.1"
                     /translation="MPSENTLFSLPDTLLRPIVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQAVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVQQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTIYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFVA"
     gene            complement(3491..4429)
                     /locus_tag="WJK78_001720"
     CDS             complement(3491..4429)
                     /locus_tag="WJK78_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598615.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1031 a         1118 c         1191 g         1122 t
ORIGIN      
        1 ctgatgcaga tatagtggat taacaaaaat caggacaagg cgacgaagcc gcagacagta
       61 caaatagtac ggcaacgctg tactggttta aatttaatcc actatatttt gtaatagctg
      121 ccattatgcc tactaggata tataccttct atataatcct tatttaaata aaaaccctta
      181 taaaaatctg tgttatctgt cgggattgaa aaaaagattt tatctttctc atcaggttta
      241 tatttgctat caatatcaaa aagagaataa ggattacaat gagttcgaca tactaggtaa
      301 aaatttatat cttggatcat gaaatattcg atatttatca ggatcgaaag atgctaaaaa
      361 ttcatcaata ttggtactgg atattttgtc atcactaata aacatcgcta gagatgggcg
      421 actttgattt tccatttgtt gattagtaaa ggatataaat actaacttgc cattgtcaaa
      481 ccacatagat ttatatagtg gattaaattt aaaccagtac gtcgttgcct cgccttgccg
      541 tactatttgt actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa tccactatag
      601 ttattgcctt tgggagaatc aattctgaca gcacataaca taggttcatc tttacagtcg
      661 ttatattggg tttcatcaaa ctcaactgca tagcacaata aaggcaatag gaaaaaaagg
      721 agattaattt attactatac ataaggcagc ctgactattc attctaaaat aaatccggtt
      781 tttaatattt gattctgctc cggattatat acataataaa ttttactgct ccaaaatctg
      841 atattaaccc tatggatttc ataaattttt cagaaaaata ggctgtgctt gaacaatccg
      901 ccgactccgg ctgtttgtca gggaaaaggc aattattttc ggttagtcag cagcctatcc
      961 tattgaatca cttaaagata tggatgtttg tcaacgccat atcaaaacac ggtcttttac
     1021 caatcgaatt ctgccgtcac cggcgcgtgg tcgctcggac gctccagcgc gcgcgtctcc
     1081 aaatcgacgc ggacatcctt caacgccgcc gccatcgcag gcgacaccaa aatatggtcg
     1141 atacgcaggc ccagtttgcg ttggaacatc gcgccgcgat agtcgaacca ggtatagaac
     1201 gcgccttcgg gatggacttg gcgcaggctg tcggtcagtc ccaaatccag caggttttga
     1261 aaccactgcc gttcgacgga cgaacagtgg attttttcgt gccatttttc agggtcgtaa
     1321 cagtccgcat cggcaggcgc gatattgaaa tcgcccagca acaccagttt gccgtggcgg
     1381 gtcatttcat cgcggacaaa ctccgtcagt gcggcaaacc actgttcctt atatttgaat
     1441 ttggggctgt ccaaagcctc gccgttgacg caatagacat tgatgacgcg cacgccgctg
     1501 acggttgccg caatcacgcg ccgttgcgga tcgtccggca gtgcgggcaa accgaaatgc
     1561 acgtcctgcg gcacgctgcg gctgacgatt gccacgccgt tgtaggtttt ctgcccgctc
     1621 caaacacagt gccagcccat catttgcaaa gcggcggccg gaaatttgtc ctgatcgagt
     1681 ttgagttcct gcaaaaccaa aatatcgggc ggattgtcgg caagcaggtt ttgcacctgc
     1741 ggcagccgca cattgagcga attgacattc caagtggtga ttttcataac atttccgaaa
     1801 aatgctgtct gaaacgttca gacggcaaaa ggaaaggatt ctaacactat gccacgcgtt
     1861 tgttttccaa atcgcgaacc gtgtgcagaa tcgccgccgc ttcttcggaa accaggcggt
     1921 attcgataat gcggtggtaa cgcgtaaaat cgactagacc ttccacgcgc aggcggttca
     1981 aatggttgga aactgcggtg gccggcaggg ataaggattt tgccagttcg gcgatattgc
     2041 gttcgctgtc caacaattga atcagtatcg ccatacgttc gggatgcgcc ataagtttga
     2101 gtatggtgtg gagcggtatt gtgttcatcg gtattcctaa aacctttgcc gcccgccaag
     2161 cggattgacg ggcggcagat atggatgatt gtgattatct ttataaatcg tattataaat
     2221 caaatattta tggatgattg tacaggattg tatgttcctt ttcccacttt tttgcaaaca
     2281 agcgtaaagg cgggctttca gacggcataa aactgccgcc ccccgtcctt tttcctgccc
     2341 taccgatgcc gccgcgctgt cgggcaaaca aaatacctgc ctgaaatgct gttttttcta
     2401 aagcatcacg acctttacga aaaatgccgt ctgaagaatc tttcagacgg catttcctcc
     2461 ctgaggcaat aaccggatta gggttaagcg gttccttgcc tgacatatca gacagccgcc
     2521 cgcaccctaa aactcacgcc acgaaatcca aacctatgtc caacgaacgg ctgctgtggg
     2581 tcagatagcc gagggcgatg ccgtccactc cggtttgcgc cacgcgcttc aggcggtcga
     2641 agccgatgcc gcccgatgct tcgcaataga tggtgtgggg gtgggcggtt tgcgtgtggc
     2701 agcggtttgc cgcttctttc agggtttcgt cgtccatgtt atccagcaaa atccgttccg
     2761 cgcccgctgc gatggcttcg tccagttgtg ccaacgtatc cacttcgatt tccacgcagg
     2821 tcaatgctcc gacagcctgt tttgcctgct gcacggcttg ggcgatgctg ccgcaatagg
     2881 cgaggtggtt gtctttgatg agcacggcgt cgtccaaacc catgcggtgg ttcacaccgc
     2941 cgcctgccct gacggcgtat ttttgcagga cacgcagcag ggggatggtt ttgcggctgc
     3001 acacgatgtc tgtaccgtat tcggcgactt cggcaacggc acgcgcggtg gcggtggcga
     3061 tgccgcttaa gtgcgtgagg tagttgagcg cggtgcgttc ggcggcgagc agcgcgcggg
     3121 cgttgccttc gacggcggca agcgtctgac ctgcgcggac ggcttgcccg tctcggattt
     3181 cggcttggaa gcggacggac ggatccatcg tctgaaaggc gaggcgcgct aaatccatgc
     3241 cggcgataac gccgtcttcg cggctgacga ggaagagttt ggcggttttg tcgggggcga
     3301 taacggcggc ggacgtaatg tcgccgcgcc tgcccaagtc ttcgctcaag gcttgttcga
     3361 ctatggggcg caacagggtg tcgggcaggg aaaagagggt gttttcagac ggcatgaggt
     3421 ttcctttgtc gaaaaagatt gatgttgcac cgatggggca aaacttcatt tgatgccgtc
     3481 tgaaaacggg ctaacggctg cccagcggca atccgatgtc cgaaatcagc ctgtcgggca
     3541 ggacgtcgtc gcggaagcgg caaagctgcg cgggacggcc tttgctgccc gatacgccgg
     3601 tatccgacgg ctcgataagg ttttgctgct gaatctggcg gcggaagttt tgcttgtgca
     3661 gcaatcttcc gctgatggct tcgacactgt tttgcagttg cagcagcgtg aattcgggcg
     3721 gcatcagttc aaaaatcacg gggcggtatt tgattttggc gcgcaggcgg gacagggcgg
     3781 tcgccagtac gcgacggtga tcgtggcgca tgggctgccc cgtgagcgcg aagtcgaagt
     3841 ttgcctgcgg ctcggcggct tccactatca gaccgctttc atacagcatt tcatagcgtt
     3901 gtaaaacgta ttcttccgac cagttttccg gttcgacccc ccagcacaaa tgaatgcgct
     3961 tgagccgcat ttgacgcact tcctccgtgt ccgccgaatt tgcccaaatg cgcaggcggc
     4021 tgacgacggc gtcgcgctgc ccgccgtcgg tgcgcaagtc ttcccacggg aaatagccgt
     4081 agcagtcctg ccatttcgca tccgggtgca ggatgctgtc ggctgcctcg cgcaccagcc
     4141 ccaaatagct gacgtacaag acgggcatgc cgtgttcgtt gcggcggtgg gtatcgacaa
     4201 aggtgtaaag ctgttccaca tagcccatag gctgcgaagt ctgcttggca acccacagct
     4261 tcacgcccgc ctgcagggaa ttgcgcagag gggagagcgg gccgttgggc aggagtgtgc
     4321 cttgggcgac ggttaatacc cgcaggccgc cgtcggtaac ggcaatcaat acgggaacca
     4381 gctcgacgat gctttgcggc ggggcttcgg cttcggggta ggcatccatg ctcggctttc
     4441 tgcgggtggg aaaggcttta tt
//
LOCUS       DAWKOX010000154         4441 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.154, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000154 DAWKOX010000000
VERSION     DAWKOX010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.154"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            85..1097
                     /locus_tag="WJK78_001721"
                     /pseudo
     CDS             85..1097
                     /locus_tag="WJK78_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1319..2656
                     /gene="ribB"
                     /locus_tag="WJK78_001722"
     CDS             1319..2656
                     /gene="ribB"
                     /locus_tag="WJK78_001722"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ7598616.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGAALLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2816..2953)
                     /locus_tag="WJK78_001723"
     CDS             complement(2816..2953)
                     /locus_tag="WJK78_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ7598617.1"
                     /translation="MKPVKLKMPSERLSDGILFGLENTYAVLSLKERIQKTKATGIYR
                     K"
     gene            complement(2964..>4441)
                     /locus_tag="WJK78_001724"
     CDS             complement(2964..>4441)
                     /locus_tag="WJK78_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7598618.1"
                     /translation="KFLNDKYDFEVKQIRKENPDEPIEFINMDIEGKTAVLKPEHSIK
                     YLSERQNGADFAKLFDDTLTDIAAHNAELFSVKTEGGAKIVLFERISQYITDEGRRDD
                     FCHALISKLAGFSFEAIFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMA
                     DILVPKEVRGQIRSVDVYDPSAGSGTLLMNVAHAIGEDKCMIYTQDISQKSSNLLRLN
                     LILNNLVHSLNNVVQGNTILSPAHKDTSGRLKKFDFIVSNPPFKLDFSDFREQLEGEE
                     NRERFFAGIPKIKAKDTDKMEIYQLFIQHILFSLKENGKAAIVLPTGFITAQSSIDKK
                     IREYLVENKMLAGMVSMPSNIFATTGTNVSILFIDKANKDNVVLIDASGLGEKIKDGK
                     NQKTVLSREEEQKICNTFTHKQAVEDFSVVVGYDEIKAKNYSLSAGQYFEVKIDYVDI
                     SADEFAQKMAGFSADLDKLFAESAKLEKEIKDRLAMLEFNS"
BASE COUNT         1159 a         1174 c          985 g         1123 t
ORIGIN      
        1 agttacaggg tgcggatgca aacgcattgc gagcgcgggt ttgaggcata cgcgcaaaca
       61 tcttaatata atggattgat atttatgatt ttctccatca tcgtccctat ttacaatgtg
      121 gaaaaatacc tccgctgctg cgtggattcc gtgcttgccg aaaattttgc cgattatgaa
      181 atgattttgg tcgatgacgg ttcgccggac ggctgcggga agatttgcga cgaatatgca
      241 ggcaaatatc cgcatataaa agtgattcat caagaaaacg gcgggctgtc ggatgcccgc
      301 aacgccggta tccgggcggc aaaaggcgat tacctaatct ttttggacag cgacgactat
      361 tgggccgata ccaaccgttc aaaaaacgcg ggggggggat tctctttgat ttacaacaac
      421 ttgcagacaa aaaggttgat ttgatcctgc atccctcgtc cctcaattac cacgtcatcc
      481 ccaaaggggc ggacttttcg gataatgatt ttgtccgcca ttttgaaacg ctggtggagg
      541 ggcggtacta tatcgccaac gcgtggacaa aaatcgtcag gcgggaaata atcatcaaaa
      601 acaatctgtt tttcccaaaa ggatacattc acgaggattt cccgtacagt ttgcaattgg
      661 cgcgttttat caagactttt gccttttacg ataacccttt ttaccagtac cgcgttctcg
      721 gcggctctat cagccacaac atcaaataca aaaatttcag cgatgtgctg acgcatctcg
      781 accggggtgt ggatttttta gtcgaaaaca aaaattcccc catctacggc ggtttgcaaa
      841 aatttgtctt cgacaatatc ggctatctga ggtctatatt ggtaaggctt tatttttcca
      901 aaaacattat cctcatctac cggaaatatt tttcatttaa agaaaaatgc agaaagatat
      961 tcggcgcgaa gacaatccgt ccggttttta tcgggaagac cgcattcatc ataggattgc
     1021 cgatattgcg cctgctcgta ccgcctatgc tgtacccggc aatcaaggcc gtttatcaga
     1081 aatttttttc ggaataagct tccggcaaac cccaaatcag aagtgcgcgg gaagttggga
     1141 caaacagccc ccggccggca aggattgcgg caatgccgtc tgaagccacg aatccggctt
     1201 cagacggcat ctgtttacca aaaagcaaat aattcggttt ggcgaaaaaa acagatttgc
     1261 tttttggtaa atacgcgatt acaatccgct acatccgatt tctacaaagg atgaaacgat
     1321 gaccgacaca gccggtctgc gccgccgcaa cctgcggcaa tggatagcag aacactacgg
     1381 cggtttgcaa acccgttttg ccgaagccgt tgccctcaac acaggcgaac tctccgccct
     1441 tttgaaaaac aaatccttcg gcgagaaaaa agcccgtaaa atcgaacagg cggcaaaaat
     1501 gcccgccttc tggctcgata ccgaacacac cgcccgcccg cccgaacaca caggaaaaca
     1561 caccatgtcc catatttccc ccatccccga aatcctagcc gacatcaaag ccggcaaaat
     1621 ggtcatcatc accgatgccg aagaccgaga aaacgaaggc gacctgctga tggcggcgca
     1681 attcgtcacg cccgaagcca tcaacttcat gatcaaacac gcgcgcggct tggtctgcct
     1741 gccgatggac ggcgaaatgg tcgaaaaact cgggctgccg atgatgaccc aaaaaaacgg
     1801 cgcgcaatac ggcaccaact ttaccgtctc catcgaagcc gcacacggca ttaccaccgg
     1861 catttccgcc gccgaccgcg ccctgactat tcaaaccgcc gtttccccga ccgctaaacc
     1921 cgaagacatc gtccaacccg gtcatatctt tccgcttcgc gcccaaaaag gcggcgtact
     1981 cgtccgcgcc ggacacaccg aagccggcgt cgacctggcg caaatgaacg ggctgattcc
     2041 tgcctccgtt atttgcgaaa tcatcaacga cgacggcacg atggcgcgta tgcccgaact
     2101 gatgaaattc gccgaagaac acaagctcaa aatcggcacg attgccgacc tcatcgaata
     2161 ccgcagccgt accgaaagcc tgcttgaaga catgggcaat gcgcctgtac aaaccccgtg
     2221 gggcgagttc caacaacacg tttacgtcga caaactctcc ggcgaaaccc acctcgccct
     2281 cgtcaaaggc acgccctccg ccgacaccga aaccctcgtc cgcgtccacg aacccttcag
     2341 cgtcatggac ttcatccaag ccaacccgcg ccattcatgg tcgctgccca aagcactcga
     2401 gcgcatccaa caggccgaaa gcggcgtagt catccttctg caccgcaccg aagacggcgc
     2461 cgccctgctc gaccgcaccc tgcccaaagg tgcaaaccaa gcctacaaat gggacagcaa
     2521 aagctacggc ataggcgcgc aaatcctcgc cggcctcaac gtcaaaaaac tgcgcgtcct
     2581 cgggcagccc tcatctttca ccggcctgac cggcttcggt ttggaagtcg tcggctttga
     2641 agaagcggaa aaataatata gtaaattcaa atactttata tttgctttat ttattgcatt
     2701 atttccgtgc aaacgaaaac ccggtctgtt gggttggatt ttgtttttgc aaatttcggg
     2761 taacttctaa ttcgtcattc ccgcgcaggc gggaatccgg ttcgtcgggt ttttgtcatt
     2821 tccgataaat tcctgtggct ttggtttttt ggattctctc tttcagggaa agaacggcat
     2881 aagtattttc caaaccaaac aaaatgccgt ctgaaagcct ttcagacggc attttaagtt
     2941 tgaccggttt cattcatcgg tatttacgaa ttgaattcca acattgccag cctatcctta
     3001 atctcctttt ccaatttggc agattcggcg aaaagtttat ccaaatccgc tgaaaatccc
     3061 gccatttttt gcgcaaattc gtcggcggaa atatccacat aatcaatctt tacctcgaaa
     3121 tactgccccg ccgacaggct gtaattcttg gctttgattt catcgtagcc gaccaccacg
     3181 ctgaaatctt ccactgcctg tttgtgcgtg aaagtattgc aaattttttg ttcttcttcg
     3241 cgggagagta cggttttttg gtttttgccg tctttgattt tttcgcccaa gcccgatgcg
     3301 tcgattaata ccacgttgtc tttattggct ttatcgataa acaggatgga aacgttggtt
     3361 cccgtggtgg cgaaaatatt ggaaggcatg gaaaccatgc cggcgagcat tttgttttct
     3421 accagatatt cgcggatttt tttgtcgata ctcgattggg cggtgataaa gcccgtcggc
     3481 aacacaatcg ccgctttgcc gttttctttc aggctaaaca agatatgctg gataaaaagc
     3541 tggtaaattt ccatcttatc cgtatctttt gccttgattt ttgggatacc ggcaaaaaag
     3601 cgttcgcggt tttcctcgcc ttccaattgc tcgcgaaaat cgctgaaatc caatttaaac
     3661 ggtggattgg aaacaatgaa atcaaatttt ttcagacgac ctgaagtgtc tttatgggcg
     3721 ggcgacaaaa tcgtattacc ctgaaccaca ttattcaaag aatgcaccaa attgttcaaa
     3781 atcagattca gccgcaaaag attggacgat ttttgcgaaa tatcctgcgt ataaatcata
     3841 catttgtctt caccgatggc gtgcgccacg ttcatcagca gcgttcctga accggctgac
     3901 ggatcgtaaa cgtccacgct gcggatttgc ccacgtacct cctttggcac caaaatatcc
     3961 gccataatcc gcgctactgc gtgcggcgtg tagtattcgg catatttgcc gcccgaatta
     4021 ctgttgtagt ctttaatcag gtactcaaaa atcgtggcga aaaaatcaaa tttttgcgca
     4081 aaaatcgcct cgaagctgaa acccgccagt ttggaaatca gcgcgtggca aaaatcgtcg
     4141 cggcgacctt catccgtaat atattgactg atacgctcga acaacacgat tttcgccccg
     4201 ccttcggttt ttaccgaaaa cagttccgca ttatgtgcgg caatatcggt cagcgtatcg
     4261 tcaaagagtt tggcaaagtc cgcgccgttt tgtcgctctg ataaatactt gatggaatgt
     4321 tcaggcttca aaacggctgt ttttccctca atatccatat tgatgaattc gattggctcg
     4381 tcgggatttt ctttgcgaat ttgtttaact tcgaaatcgt atttgtcgtt taggaattta
     4441 t
//
LOCUS       DAWKOX010000155         4433 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.155, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000155 DAWKOX010000000
VERSION     DAWKOX010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4433
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.155"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(159..1268)
                     /gene="mltB"
                     /locus_tag="WJK78_001725"
     CDS             complement(159..1268)
                     /gene="mltB"
                     /locus_tag="WJK78_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ7598619.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKES
                     RPAFDAAAVFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKAD
                     IVKIMHRPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAV
                     IGIETNYGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGS
                     YAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILV
                     SATLAPGADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEY
                     YLGLNNFYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1265..1447)
                     /locus_tag="WJK78_001726"
     CDS             complement(1265..1447)
                     /locus_tag="WJK78_001726"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598620.1"
                     /translation="MPSERGSAFRRHFRRRQADFGRRKRQRAAFCKAADCGGYRISRR
                     ALAPLSHLPYLFGTYL"
     gene            complement(1469..2896)
                     /locus_tag="WJK78_001727"
     CDS             complement(1469..2896)
                     /locus_tag="WJK78_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ7598621.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDAAACLLNDIRKDILDCRYCG"
     gene            3081..>4433
                     /locus_tag="WJK78_001728"
     CDS             3081..>4433
                     /locus_tag="WJK78_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ7598622.1"
                     /translation="MTYPIPKPREKSRWSNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHALPDLAVNRQSDEPLQALKDFQTAFEGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     F"
BASE COUNT          941 a         1238 c         1222 g         1032 t
ORIGIN      
        1 atgcaaaaat gccgtccgaa ccgaaacgtg gttcagacgg cattttatag tggattaaca
       61 aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtacggcaa ggcaaggcaa
      121 cgccgtactg gtttaaattt aatccactat aaaaaacatt acaatcccgg gccgccaagc
      181 gaattggcaa tgtccctgac cgccgttaca tacatccgac tgtgattgta ctgccatacc
      241 gtataaaaat tgttcaagcc caaataatat tcaaacacgc cgggtgcggt ttccagtttg
      301 aacaaaaccg ccttttcatc atctgcaagc tcttcgccgg ggatgatgcc gtacgccttt
      361 aaatccgcca ccgtccgcgt cagggcggtt ttttcgccaa tgattgcctg aacatccgca
      421 cccggcgcca atgttgcaga caccagtatt ttcccgcccg tgcgccaacc gtgctgcttc
      481 atataattgg caaccgatgc cgcgacatcg ccgatgttgc cccatatgtc ccgatgtccg
      541 tccccgtcat aatccaccgc ccatttccgg tagctcgaag gcataaattg cggcatcccc
      601 attgcgcccg catagctgcc tttaaaggcg aaaacatcgc cgccttcttc ttttgccagc
      661 tttaaaagct cgaccaattc tttttggaaa aacccggcgc ggcgggggta atcaaagcct
      721 aaggtcgcca atgcgtccgc cacacggaaa ctgcccgtat ttttgccgta attcgtttca
      781 atcccgataa ccgccacgat aagttcggca ggcacgccgt atttttgcgc cacatcatcg
      841 ataagcgcgc ggttttccgc ataaaaccgg cgcgcgccgc gaaatttcgc cttgcccgaa
      901 tttcccgtgc ggaacacata ccacggacgc gatgtggagg ggcggtgcat aatcttgacg
      961 atgtccgcct tgtaagccgc tttgtcaaaa aaatcctgcc attccgcccg ggaaaaatcc
     1021 cctttcccga cttcatcgtc cacaaaacgg cggacatttg cattggcggc aaacccgctg
     1081 tcggataccg gtacggctgc cgcgtcaaat acggctgccg cgtcaaacgc ggggcggctt
     1141 tcttttttca tttcatccgc gcggggggct tgggcttcat ttgcccgggg cgggcgtgcc
     1201 tccatcgccg tacaggcaga caaagccgcc aaacaaattg ccagcggcag tatttttctc
     1261 tttttcataa atatgttccg aacaaatagg gtaagtggga aagcggcgca agggcgcggc
     1321 gcgaaatgcg gtatccgccg caatcggcgg ctttgcagaa tgccgcgcgt tgccttttgc
     1381 gccgcccgaa atctgcctgc cgccgccgaa aatgccgtct aaaggcactt cccctttcag
     1441 acggcattgc ctgcgccgta tttgcccgct atccgcaata tcggcagtcc aatatgtctt
     1501 tgcggatatc gttcagcagg caggctgccg cgtcttcgtg ttccgcctgt acgaagacaa
     1561 agagtcgggc gatgattttg ccgataaaga ctttttgcag ggcgcaggcg tcggtcagcg
     1621 tgtgttcctg caggaagctg cggatgtctt cgggtaaggt gtaatcacgg gcaacggcgg
     1681 caaagcgggc atcggtttgc aggcggtcga gcagggtttg gtttttgtcc aacttcatgc
     1741 ctgcttcttt ttcttcggcg gtggcgcgga caaactggtc gtaaatttcg gcataaagca
     1801 tatcgttcgg gccttcaaaa atcgtgaagg ggcggatgtc gatagcgata ttgccggcgg
     1861 tgtgtccgcg ttcaaaaccc ttcgcgccca agagtttttg caacatttgc gcggcggcgt
     1921 aagtgtattc cgtggcgagg gttttgacga tgttcgcctc catcagctga tgggcgacgg
     1981 gggcaacagg cgaaacggaa tggcagacgt agcggtaaag aatctcggaa acctgatggc
     2041 ggcgccggat ttcgcggcgt tcgtaatcga cgaatctgat gtcgttgcgg acgtatcgtt
     2101 ccaggttttc aaggatgtat tccataatgc cgtgcgtcat gccgatcagt tgcaggcggc
     2161 tgcggataaa gatgttttgg aacgcgcgca aaccggcagc gtcgctctgg gagagtttca
     2221 tcacggcggt tgcaggcatt tcggcatcga tgcggttgac ggcgtaacgg acggcgcgca
     2281 agccttcgga tgcgagggtt tcgcagcgga tgtatgtttt ggggacgagc agcaggtcga
     2341 tgactttggc gagtttgccg tttttgcgtt ctttggcggc aacgaggagg aagtcgcttt
     2401 gcgagttgcc ctgccagtat tttgcggcgt tgacgtaaat ggtttgtccg tcggtatatt
     2461 cgtagtaaga ctgcatttct cgggcaatcg ccgcgccgga ggtttcgggt tcggtaacgc
     2521 ccaaaccacc gccctcgcct ttgaaaacca tgtccaaacc ctgtgcgatt tgcgcttcat
     2581 cgccgaactc ttgcagtggc tgcaacacca gcgcgccttc gatgccggta cgcagcgtaa
     2641 cgggcacgcc gtaatgcccc gcaatccgca agacttcctg aatttcaaac tggctgccct
     2701 tgcgcccgcc gtgttttttg tcgaggaagg gcaacagcaa acccgcctgc ttcaaggcaa
     2761 gccatttgtc ttcgggcagg tatcgcatca ggtcgatacc gtctgaaaaa atgcggcgga
     2821 atgcggattc gatgtgcttt aaaaaagcag ccgtgtccat agttgacggc tgcgcgctcg
     2881 gttcggtgtg tatcatcggc ttcctctgtc ggttcccatt aatcggcggc cggtcaaacc
     2941 gcctgccaca gtttagagtt gattttctaa actttaccac aaagtgcgcc gggcaacaat
     3001 ccgccgacct ttcagacggc atcgcgcccc ctcccgtgct aaaatgaccg tttgcatcac
     3061 tgtccgccga ttgccgcact atgacctacc ccatccccaa accccgtgaa aaatcccgtt
     3121 ggtccaatct ttcgcaaggc tcgctgccct tggctttggc gcgttatctg ccgcataagc
     3181 ggctcaaggt cgtgctgacc caagatgcgg aacaggcgct acgccttcag acggcatggc
     3241 ggtttttccg tccgcacgac acggcggtgt tcctgccgga ctgggaaacg ctgccttacg
     3301 agcgtttttc gccgcatcag gatttggtgt cggaacggct gtcggcgttg tggcagatta
     3361 agagcggcgc ggcggacgtg ttgttcgtgc cggttgccac ggcgatgcag aagctgccgc
     3421 ccgtgccgtt tctggcaggg cgcacgtttt ggctgaaaac agggcagact ttggatatag
     3481 gccgtctgaa aaccgatttg gtagatgcgg gctacaacca tgtttcccat gttgttgcgg
     3541 cgggcgagtt tgccgtgcgc ggcggcattg tcgatttgtt ccccatgggc agcgaaatgc
     3601 cctatcgcat cgatttgttt gacgatgaaa tcgacagcat caaaaccttt gatacggaca
     3661 cgcagcgcac catctccccc gtttccgaaa tccgcctgct gccggcgcac gagttcccca
     3721 ccgacagcga agcgcaaaaa atcttccgca gccgcttccg agaagaagtc gacggtaatc
     3781 cgaacgatgc ggctgtgtac aaagccgtca gcaacggcca cttcggcgcg ggcgtggaat
     3841 attatctgcc gctgtttttt gaaaatgagc tggaaacgct gtttgactat atcggcgaag
     3901 acgcgctgtt tgtctctttg ggcgatgttc acgccgaggc aaaccgcttt tggagcgatg
     3961 tcaaatcccg ttacgcgatg gcgcagggcg acgaaaccta tccgcctttg cttccacagc
     4021 atttgtatct ctctgctgat gtttttgcag gccgtctgaa aaactacgga caagtgctgc
     4081 ccgatgtttc cggcaaggaa cacgccctcc ccgaccttgc cgtcaaccga caatccgacg
     4141 agcctttgca ggcattgaag gattttcaga cggcgtttga aggacggatt ttgctgtgcg
     4201 ccgaaagttt gggacggcgc gaaaccatgc tcggtttctt gcagcaaaac ggtttgaaag
     4261 ccaaacctgt gtccgactgg cagggcttct tgtcggcgca tgagccgctg atgattacag
     4321 ttgcgccgtt ggcatacggg ttcaaactgg gcggactgca atcgccgaac caacagcaaa
     4381 ctacttccgc ctccgaagga gaaggcgatg cggttaccga ccaaaccgaa ttt
//
LOCUS       DAWKOX010000156         4423 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.156, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000156 DAWKOX010000000
VERSION     DAWKOX010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4423
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.156"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(103..1020)
                     /gene="thrB"
                     /locus_tag="WJK78_001729"
     CDS             complement(103..1020)
                     /gene="thrB"
                     /locus_tag="WJK78_001729"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ7598623.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACTRLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALEKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(1057..1785)
                     /gene="ubiG"
                     /locus_tag="WJK78_001730"
     CDS             complement(1057..1785)
                     /gene="ubiG"
                     /locus_tag="WJK78_001730"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ7598624.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1937..3178
                     /locus_tag="WJK78_001731"
     CDS             1937..3178
                     /locus_tag="WJK78_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ7598625.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSALGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKPSVLFDTQAPTGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRQKFGAGKTYKVYGGLWLMVWVFLF
                     GIINIAAQVLSQMELVPVFKG"
     gene            3186..3329
                     /locus_tag="WJK78_001732"
     CDS             3186..3329
                     /locus_tag="WJK78_001732"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598626.1"
                     /translation="MPFEARRRLQTALPQQTATVFRHTAHYPAPHAQIPPRQARDATI
                     KEQ"
     gene            3329..4383
                     /locus_tag="WJK78_001733"
                     /pseudo
     CDS             3329..4383
                     /locus_tag="WJK78_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
BASE COUNT         1042 a         1440 c         1014 g          927 t
ORIGIN      
        1 aatggaaaat actcggctat cgtctcattt tcgttttaat cagccataaa aatgccgtct
       61 gaaacccttt cagacggcat ttctgtcaaa cgccggacgc actcaatcca aactcaacag
      121 caggttgcgg aacgcgttcg ggtctttgat aaacgtcatc tcgcccgcct gcggaaaatg
      181 aaagtccaac aggcgcgaca cccaaaaacg gatgcagccg gcacgttggg cggtcgggaa
      241 atacgccttt tcttcggcac tcaaggggcg cacgccctca taaccgccga taaacgcctt
      301 ttccaacgcc tcatccaact tattgtccgc cgtccttgcc caatcattga ccgcaatcgc
      361 caagtcatac ataaaattgc cccggcaggc ataatagaaa tcgatgaaac ccgatacctg
      421 accgccgtca agcaacacat tgtctttaaa caaatcggca tggatgatgc ccgaaggcag
      481 atgattgccg agattgtcct tcagcgcatc gatttcggaa cacagcagcg cggcatcgtc
      541 ttgcgacagg acgggcagca gccgggtgca cgcctccgtc caccacgcat cgtaacgcgg
      601 gttttccatt tccaaaggga aatcggcggc ggcaaggtgc attttggcca gcatcgcacc
      661 ggtatggaaa cactgctccg ccgtcggcag cgcggtatcc gaacctttca ggcaggcaac
      721 caaacaagcc ggcttgcccg ccaaaacgga atcaagccgg ccgtctttgc gcgcaaccgg
      781 cgcggcaacc gccacgccct tcatactcaa atgccggtta agctccagaa aaaacggcag
      841 ctcttcctgt ttcaacactt caaacacggt cagcacataa cgtcccgaag tcgtcgtcag
      901 aaaataattg ctgttggtaa tcccctgcgc gatgccctgc agggaaacaa attcccccaa
      961 atcgtaaccg ctcaggaagc cgcgcatttc atcatcggaa acactggtat agacagacat
     1021 atcaactcac ttgctcaaaa acgggcaaac ccgccgtcag aacgccggac ggcaggcaaa
     1081 catataattc acatcggtcg aatcgcacag ggcataagtt tgcgacaaca catggtaagt
     1141 catacccttc gtatccgcca catccaagcc tgcctgacgg cacattcgcg ccagctcggc
     1201 aggtgcgatg aattttttcc agtcgtgcgt gcctttgggg acaaacttca acagatattc
     1261 cgccgccaca atcagatgca ggtacgattt cgggttttta ttgatggtgg aaaaaaacac
     1321 catgccgtcc ggcttgacca gcttggcaca agcacgcacg atggcggcgg gatcggggac
     1381 gtgttccatc atttccatgc acgttaccac atcgaacgag tgcggttccg cctcggcaag
     1441 gtcttccacg cggatacatt cgtattcgat atcggcgaca ttgttcaaag ccgcgtgcag
     1501 gcgggcggtt tccaacgact gctccgccat gtcgatgccc tttacaaacg ccgcgccgcg
     1561 ccgtgccata ctttccgcca agatgccgcc gccgcagccc acgtccaaaa cccgtttgcc
     1621 gcacaaatcc gcgtgcccgt cgatataatc cagccgcagc ggattgatgt cgtgcaaggt
     1681 tttgaactcg cccgacttgt cccaccattt gtcggcaatc cggctgaatt tggcgatttc
     1741 cccctcatcg acattatatt ttttgtcgga cattttccct cccatctgac gaaccgccca
     1801 ctccaaaacc caagattata ctatggaaca caatgccgtc tgaaagcctt ttcgggcggc
     1861 gcggcgcaaa tgccttacaa atccttacac tttacggcat aatggcggct cgctttttct
     1921 ggcagaaaga caaaatatgc ccaccaaaac cccttcactg ttcggcggcg cgatgattat
     1981 cgccggcacg gtcatcggcg caggtatgct cgccaacccg accgccacat ccggcgtatg
     2041 gtttaccggc tcgctggccg tgttgctgta cacctggttt tctatgcttt ccagcggcct
     2101 gatgattttg gaagtcaaca cccactatcc ccacggcgca agtttcgaca cgatggtcaa
     2161 agacctgctc ggacgcggct ggaacatcat caacggcatc gccgtcgcct tcgttttata
     2221 cctgctcacc tacgcctaca tcttcgttgg cggcgacctg accgccaaag gcttaggcag
     2281 cgccttgggc ggcaatgttt cactcaccgt cggacaactc gtcttcttcg gcatcctcgc
     2341 cttttgcgta tgggcatccg cacgcttggt cgaccgcttc accagcgtcc tcatcggcgg
     2401 catggtatta acctttattt gggcaaccgg cgggctgatt gccgatgcca aaccgtccgt
     2461 cctcttcgac acccaagccc ctaccggcac caactactgg atttacgccg ccaccgccct
     2521 gcccgtctgc ctcgcttcct tcggcttcca cggcaacgtc tccagcctgc tcaaatactt
     2581 taaaggcgac gcgcccaaag tggctaaatc catctggacg gggacactga ttgcgctggt
     2641 aatttacgtc ctctggcaaa ccgccatcca aggcaacctg ccgcgcaacg agttcgcccc
     2701 cgtgattgcc gccgaagggc aagtctccgt cctgattgaa accctgtcca aattcgccca
     2761 aaccggcaat atggacaaaa tattgtccct gttttcctac atggcaatcg ccacctcgtt
     2821 tttaggcgta accttaggtc tgttcgacta catcgccgac atcttcaaat ggaacgacag
     2881 cgtgtccggc cgcaccaaaa ccgccgcgct gaccttcctg ccgcctctaa tttcctgcct
     2941 gctcttcccc accggcttcg ttaccgccat cggctacgtc ggcctggcgg caaccgtctg
     3001 gacaggcatc atccccgcca tgctgctcta ccgttcgcgc caaaaattcg gcgcaggcaa
     3061 aacctataaa gtttacggcg gcttgtggct gatggtttgg gtcttccttt tcggcatcat
     3121 caacatcgcc gcacaggtat tgagccaaat ggaactcgtc cccgtattta aaggataaaa
     3181 gcaaaatgcc gtttgaagcc cgccggcggc ttcagacggc attgccgcaa caaacggcaa
     3241 ccgtattccg gcacacagcg cattaccctg cccctcacgc acaaatcccg ccccgacagg
     3301 cgcgggacgc aaccataaag gaacaatgat gaagctcaaa atagatattg caaccaacaa
     3361 cttcaaacac ggcggcggca cggaacgcta cacattggat ttggtaaagg gtctgaacag
     3421 acaaaacatc acaccggccg tttatgcgac gaaatttgat cacggcattc ctgaatacgc
     3481 cctaatcgaa ccccatcttg tcgatcaaca ccggacgctg aaaaaactac gctcattcct
     3541 cttttcaagc cggctcgctc aaaccagaaa aaacagtgcc gccaaactga ttgcctgcca
     3601 ccacgccgat tacgccgacc tcctcatctg cggcggcaca cacttgggct acctgcacca
     3661 tatggcgcaa aaaccgaacc tgctcgaccg cctcgccata cgccgcaacc gcagcaacta
     3721 cgccaccgcc aaactgatta tggcgcattc ccatatgatg cggcgcgaac tggtcggact
     3781 gtacggcgtt ccccccgaaa aaatccaagt cgcccccccc ccgcagatac ggaacgcttc
     3841 tttccacaac ctagagaaac tgccgctctg cgcgccaaat acggttttgc cgaccatgaa
     3901 accgttttcc tatttccatc gaccggccac acgcgcaaag gcctggaact gcttgccgac
     3961 tttttcgaac ataccgacct gcccgtcaag cttgccgttg tcggctcccc gctcccccgc
     4021 cctatgaaaa acgtcgtcgg actgggcttc tgcaccgata tgcccgaact ctaccgcgcc
     4081 gccgacttta ccattatggc ctccctgtat gaacccttcg ggctggtcgg tgtcgaatcc
     4141 gtcctatgcg gcacacgcgt cgtcctctcc gaaaacatgg catgtacaga ggtcatgaac
     4201 gaagaagccg gattcttttt ctcacgccaa aacccggaaa ccctggcgca agccgttgcc
     4261 caagccgtca gccttaaaaa acagggcgga caccgcctgt ccgacccgat gcgtgcactg
     4321 aactacaacc cgtccctgtc gcaccacatc gaccgactga ccgacatact ggcatccgta
     4381 taacaaaatg ccgtctgaac gagttttcag acggcattgc tgc
//
LOCUS       DAWKOX010000157         4416 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.157, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000157 DAWKOX010000000
VERSION     DAWKOX010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.157"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            26..2041
                     /locus_tag="WJK78_001734"
     CDS             26..2041
                     /locus_tag="WJK78_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ7598627.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILAQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCAAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEKPDRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPADCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGEIGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFTDGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGIPELPHYLGSVGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGASWTDEYGNPQKYEVCKCRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSAQSWLYSPDGGGHTGNGTQRESADELACVLLFLKEFLG"
     gene            complement(2155..3111)
                     /locus_tag="WJK78_001735"
     CDS             complement(2155..3111)
                     /locus_tag="WJK78_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ7598628.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            3347..4312
                     /locus_tag="WJK78_001736"
     CDS             3347..4312
                     /locus_tag="WJK78_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7598629.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKEAFEKAEPVAAGKE"
BASE COUNT          932 a         1205 c         1383 g          896 t
ORIGIN      
        1 acctgcccaa ccctcaagga ccccgatgaa atcctacccc gacccctacc gccattttga
       61 aaacctcgat tccgccgaaa cgcaaaactt cgctgctgaa gcgaatgccg aaacgcgcgc
      121 gcgtttttta aacaacgaca aggcgcgcgc gctttcagac ggcattttgg cgcagatgca
      181 ggacacgcgg cagattccgt tttgtcagga acaccgcgcg cggatgtacc atttccatca
      241 ggacgcggag tatccgaagg gcgtgtaccg cgtgtgtgcg gcggcgacgt atcgttccgg
      301 ctatcccgag tggaaaatcc tgttttcagt ggcggatttc gacgagctgc tcggcgacga
      361 tgtgtatttg ggcggcgtgt cgcacttggt ggaaaagccc gaccgtgcgt tgttaacact
      421 gagcaaatcg ggcggcgata cggcgtacac gctggaagtg gatttggaag caggggagtt
      481 ggtagaaggc ggttttcact ttccggcagg caaaaaccat gtgtcgtggc gcgatgaaaa
      541 cagcgtgtgg gtgtgtccgg cctgggacga gcggcagttg accgaatcgg gctatccgcg
      601 cgaggtgtgg ctggtggaac gcggcaaaag tttcgaggaa agcctgccgg tgtaccaaat
      661 cggcgaagac gggatgatgg tgaacgcgtg gcgttacctc gatccgcagg gttcgccgat
      721 tgatttgatt gaagcgtctg acggttttta caccaaaacc tatttgcagg tgtcggccga
      781 aggcgaggcg aaaccgttaa acctgcctgc tgattgcgat gtggtcggct atctggcggg
      841 gcatcttttg ctgacgctgc gcaaggactg gcaccgcgcg aaccaaagct atccgagcgg
      901 cgcgctggta gcggtgaaac tgaatcgcgg cgaaatcggg gcggcgcagc ttttgtttgc
      961 gcctgatgaa acgcaggcat tggaaagcgt ggaaacgacc aagcgttttg tcgtggcgag
     1021 tctgctggaa aacgtacaag gccgtctgaa agcgtggcgt tttaccgacg gcaaatggca
     1081 ggaagccgaa ctgccgcgcc tgccctcggg cgcgttggaa atgaccgacc aaccgtgggg
     1141 tggcgacgtg gtttaccttg ccgccagcga tttcaccacg ccgctgacgc tgtttgcgct
     1201 ggatttgaac gtgatggaac tgaccgtcat gcgccgtcag ccgcagcagt tcgattcaga
     1261 cggcatcaac gtgcagcagt tttggacgac ttcggccgac ggcgagcgta ttccttattt
     1321 tcacgtcggc aaaaacgccg cccccgacac gccgactttg gtttatgcat acggcggttt
     1381 tggcattccc gagttgccgc attatttggg cagcgtcggc aaatattggc tggaagaggg
     1441 caatgccttt gtgttggcaa acatccgcgg cggcggcgag ttcggcccgc gctggcatca
     1501 ggcggcgcag ggaatcagca aacacaaaag cgtcgacgat ttgcttgccg tcgtgcgcga
     1561 tttgtccgaa cgcggtatca gttcgcccca acacatcggc ttgcagggcg gcagcaacgg
     1621 cggcctgatt accgccgccg ccttcgtgcg cgaaccgcaa agcatcggcg cgctggtgtg
     1681 cgaagtgccg ctgaccgata tgatccgcta tccgctgctc tccgccggcg caagctggac
     1741 ggacgaatac ggcaacccgc agaaatacga agtctgcaaa tgccggttgg gcgaattgtc
     1801 gccgtatcac aatctttcag acggcatcga ttatccgcca gcgctcatta ccaccagcct
     1861 cagcgacgac cgcgtccatc ctgcccacgc gctcaagttc tacgccaaac tgcgcgaaac
     1921 ctccgcgcaa tcttggctct actcacctga cggcggcggc cataccggca acggcaccca
     1981 acgcgaatcc gccgacgaac tcgcctgcgt gttgctgttt ttgaaagagt ttttgggcta
     2041 agggcgggga gcggcactgc cgccgcgaat gaaaaaaggt cgtctgaaac tgctttttca
     2101 gacgaccttt tttaatggtt gtttcaaatc aaaatatcta tgccgccggc cccatcagca
     2161 cttcttcaca tccgaaggca aaaatccgta atgccgtctg aacgcttcgt tgaaccgtcc
     2221 cgcgtggcgg tagccgcaaa agtgcatggc ggcttggacg gtgctgccgg attcgatgag
     2281 ggcgagcgcg tgttccagcc gcaggcggcg caggcatccg gcgacggttt cgccggtttg
     2341 cgctttgaaa tagcgtttca ggtagcattc gttcagtccg acgcggcggg cgatttcggc
     2401 gatggtcagc ggacgggcga attcgtgttg caggatgtcg gcggcttcgt ctatgcgccg
     2461 acggcggtaa ccgttgtcgt ggcggcggaa ggtgaagcgc aataatcggg cggagagttc
     2521 cagcgcggcg gcttcgtcgg caagcaggcc gaagccgtcc gattcgaacg ggcgttgcag
     2581 cagtgggcag gccgccgccg tcagtgccgc cgcgttttgc gccagccgtt gcagggcgaa
     2641 tcggcctatc gtttgcggcg aaaacaggcg ttcgtccagc aagccttcgt cgtgccagcg
     2701 gcgcagtttt tccagcgaaa aatccaaatg cagcgcgcac atgccgctgt tgtcgggcag
     2761 cagggtttcg gatacgtccg ccaactcgcc gcgtaccagc cagatttcgc cggcagacgg
     2821 gcggtattcc ctgccgccca tttgtaaccg gttctgcccc gacaccatga cgaacaaggc
     2881 gcagttgtgg ctgaaattgt ggatttcggt gggaaacgcg cccgttccgc cgccgcgcat
     2941 ccgcgacaag gtgatgcccg aatcgaagcg gttgatgcac atttccagat gcaaaccggg
     3001 ctgttttgcc tgcgcaatga gcgcgctgtc ggaacagccg tccaacgccc agccggattt
     3061 atcggagcgg acataggttt ggtactggcg gtagatggcg gcggtgttca tgattggata
     3121 ggaacgagtt gtctaacaaa tgaattaaat aggaattatt accaataatc aagcgcaggg
     3181 attggttgaa acggaaaagg tcgtctgaaa gggtgtttca gacgaccttt tccgtatcgg
     3241 gaatttgttt tgccgtatcg ggaattttgc gttttgcggc gtggtttctg caggttgttt
     3301 gcttaataat aaacattctt attcgtatgc aaaggaaccg cacaccgtga aaccgcgttt
     3361 ttattgggca gcctgcgccg tcctgctgac cgcctgttcg cccgaacctg ccgccgaaaa
     3421 aactgtatcc gccgcatccg catctgccgc cacactgacc gtgccgaccg cgcggggcga
     3481 tgccgttgtg ccgaagaatc ccgaacgcgt cgccgtgtac gactgggcgg cgttggatac
     3541 gctgaccgaa ttgggcgtga atgtgggcgc aaccaccgcg ccggtgcgcg tggattattt
     3601 gcagcctgca tttgacaagg cggcaacggt ggggacgctg ttcgagcccg attacgaagc
     3661 cctgcaccgc tacaatcctc agcttgtcat taccggcggg ccgggcgcgg aagcatatga
     3721 acagttggcg aaaaacgcga ccaccataga tctgacggtg gacaacggca atatccgcac
     3781 cagcggcgaa aagcagatgg agaccttggc gcggattttc ggcaaggaag cgcgcgcggc
     3841 ggaattgaag gcgcagattg acgcgctgtt cgcccaaacg cgcgaagccg ccaaaggcaa
     3901 aggacgcggg ctggtgctgt cggttacggg taacaaggtg tccgccttcg gcacgcagtc
     3961 gcggttggca agttggatac acggcgacat cggcctaccg cctgtagacg aatctttacg
     4021 caacgagggg cacgggcagc ctgtttcctt cgaatacatc aaagagaaaa accccgattg
     4081 gattttcatc atcgaccgta ccgccgccat cgggcaggaa gggccggcgg ctgtcgaagt
     4141 attggataac gcgctggtac gcggcacgaa cgcttggaag cgcaagcaaa tcatcgtcat
     4201 gcctgccgcg aactacattg tcgcgggcgg ctcgcggcag ttgattcagg cggcggagca
     4261 gttgaaggag gcgtttgaaa aggcagaacc cgttgcggcg gggaaagagt agggagtcgt
     4321 ctgaaaacgg agtttccgaa ggaagcgggg ggtttctgcg aagctaaagt gcggtttcaa
     4381 cgaattgaaa agcagcctgt atgttgaaaa taccgc
//
LOCUS       DAWKOX010000158         4384 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.158, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000158 DAWKOX010000000
VERSION     DAWKOX010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.158"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(44..3076)
                     /locus_tag="WJK78_001737"
     CDS             complement(44..3076)
                     /locus_tag="WJK78_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsK"
                     /protein_id="HEZ7598630.1"
                     /translation="MFWIVMIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFSELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPNASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNGAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIYIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPAEFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSSGQYLSETEAFGHDSQAVCPFENVPSERPSCRVSDTEADE
                     GAFQSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGSGSEELPGIGRSGDDETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            3241..3921
                     /locus_tag="WJK78_001738"
     CDS             3241..3921
                     /locus_tag="WJK78_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ7598631.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSVGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            3950..4309
                     /locus_tag="WJK78_001739"
     CDS             3950..4309
                     /locus_tag="WJK78_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ7598632.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT          889 a         1288 c         1115 g         1092 t
ORIGIN      
        1 ccgtctgaaa cagtcttcag acggcatttc catttgcaaa aaatcaagca ttgtccaagg
       61 ggacgagaat cgtacggttg ccgttgtgtt ccggtgcgga cacaatgcct tccgcctcca
      121 tctggtcaat cagacgcgcg gcgcggttgt agccgatgcg caaggcgcgc tgtacgcccg
      181 aaatactggc tttgcgcgtt ttcaggacaa cggatacggc ttcatcatac atcggatcgg
      241 tttcgtcgtc gccgctgcgc ccgatgccgg gcagctcttc gctgccgctg ccgctcaaaa
      301 tatcgtcaac atagtccggc tcgccaaact gtttcaaata ttcgaccacg cggtgcacct
      361 cttcatccga ggcaaacgcg ccgtgaacgc gctgcggata ggcagtaccc ggcggcagga
      421 acagcatatc gccctgaccg agcaggtttt ccgcgcccat ttggtcgaga atcgtgcggc
      481 tgtcgatttt gctggacact tggaacgcga tacgcgtcgg gatgttcgcc ttaatcagac
      541 ccgtgatgac atcgacgctg gggcgttgtg tggcaagaat caaatggatg cctgccgcgc
      601 gggctttttg tgcgaggcgc gcaatcagtt cctcgatttt cttgcctgcc gtcatcatca
      661 aatcggcaaa ctcatcgacc acgaccacga taaacggcag tttttccaaa ggttcgggat
      721 cgtcgggcgt gaggctgaac ggattgccga ttttttctcc ccttgctgcg gcttcggcga
      781 ttttttgatt gaagcccgca agattacgca cacccataaa gctcatcagg cggtagcgtt
      841 tttccatttc gttaacacac cagttcagcg cgtttgccgc cagcttcata tcggtaacga
      901 caggggcgag caggtgcggg atgccttcgt aaatgctcaa ttccagcatt ttcggatcga
      961 tcataatcat acgcacgtct tccggcgcgg ctttgaaaag catagacaga atcatcgcgt
     1021 tgacacccac cgatttgccc gaaccggtcg tgccggcaac caacaaatgc ggcgcttttc
     1081 ccaagtcggt tacgacgggc tgtccggtga tgtcctgacc gagcgcgagc gtcagcttgg
     1141 atttggattc ggcaaactcg ggcgaattga agatttcgct caggcgtatc atttggcgtt
     1201 tcgggttcgg aagttccaaa cccatacagg ttttgccggg gatggtttcg acaacgcgga
     1261 tggaagccac gccgagcgaa cgcgccaagt ctttttccag attcagaacg gaattgccgc
     1321 gcacgccgac atcgggttcg atttcataac gcgtaatcac ggggccggaa taagaatcga
     1381 caaccttgac cttgactttg aactccgcca atttttcttc gatggtgatg ctgttttcca
     1441 acagttcttc ttcggtttgc gtcgcctcgg gattgaacag cggcggcaga agcaggtcgg
     1501 ttgtcggcag gtgttcggat accgcaccgg tctcttccga ttggaacgcc ccttcatccg
     1561 cttccgtatc cgatacccgg caggacgggc gttcagacgg cacattttca aacggacaaa
     1621 ccgcctgact gtcatgcccg aacgcttcgg tttccgacag atattgcccg cttgaccgct
     1681 ctgccgcacc ttcactgccg tcatctgcaa tagcggcggt ttcctcctgc caacctccat
     1741 tcaaaacatc atcggcaaga tggtcggttt cggcaatgcg gctgcgttgc gcctgctcga
     1801 attctgccgg cggttcatag gtacggttgt agatttccga tacgggaggc ggcggcggaa
     1861 tatcgattgc gggcatggga actttcggca cttcgggtgg ttcgaccacc caagcatcgg
     1921 gcgcagcagg ttcttcaata tagatatcgg cagcttcatc ataaaccgga ccgccgtatc
     1981 ccacagacga aacggtttcc gtgaaaacat tttcggtttc agacggcatt tcgacatccc
     2041 gtttcccgac aaccgtccga ctttccggaa tcaggcgcga aatccgcgcc tccgcagaaa
     2101 ccgttgcctt gttcggttct ttcaaattga cggaaacgcg gcggcaggca tcgcggacgg
     2161 ctgtgccgtc tgaaacggac tgtccttggg aaacatccgg ggattttgcc tccgcctgcc
     2221 ctgcatgacg gcggaacggc gcattccgtg cattttcggc tttgactgca gaaaaggcag
     2281 acggatgctg cttctcaaaa tacggctcaa atccgtaatc cgcagactcg gaaaacgctt
     2341 ctttgtccgc atcgaacata cgggaatacg tgcgttgaag cacagggtcg tccaaaccga
     2401 taatctgcag cccttccatc ggggtatcgg acacgcggac tttggggacc gctgtttcgt
     2461 ttttctcaaa tgcatcgata tagcgttttt tcgtttccct taaagccgcg ccgtttaagg
     2521 cacgcgttgc ttcttccaaa gtgatttcct taaaaaccgg acggacgggc gaaatttcgc
     2581 tttcagacgg catcaaccct tcagcaatac tccggtcgaa tgggatgcgg cggttgtcga
     2641 ttacggcagt tgcaatgtct tccgtatcgg cagcctcttc ctccgcagct tctgctgctt
     2701 ccgtttccgc ttcttccgtc ccgtttccac tgtctgaata tccgtcggat gcgttcggaa
     2761 catccgcacg gtttgcagaa gcaggcggaa caggcctatc cggttcggat tcgtgcgcca
     2821 gatagtttcg gcagaaacgg acgacaccga cgaacagcca atacactgcc gttttgacgg
     2881 catggaaaag catcagggca agttcggaaa aatcgggcat accgtctttg atttcaggca
     2941 gctccgcctg tttttcccct ttcttttcct gccacgcaga aacctcgcgc atccactcgc
     3001 gttcggattg tgcgcggaca aaaaacaagc cggcaagcgc aagcaacaaa ataacgatca
     3061 taactatcca aaacatatgc cgtttcccgc aagacaaacg attaaacggg tttattttaa
     3121 cgtgtttcca tcccaaaaaa aacaaccggt cggcaattct gccgaaaccg attcggcttt
     3181 cggtttgccc ccaccgacag tataatagcc gtcccttccc ttaatctttg cggcattgcc
     3241 atgattttcc aaacagtctg gttttcagat gtggtactgt cggtttcgtg gattgtcctt
     3301 atcctgatac tggcagcttc cgctccgtcg gcattccgct cgcttgcccg ctaccgttct
     3361 gcccttcccc tgtgtaccgt aattttctcc gcggcatggt gtctgaacgc ctctgccggc
     3421 ggcggacagc ttgcacagat gaactaccac ctgctcgccg tcaatctagt tgctctgatg
     3481 gtgggcactt ccgccgcctt ttggcttgcc gcgctgctga tgctgcccta ctgcctgctg
     3541 tttgccggtt ctgtcggcgc atatccgccg aacgctttgg tgctgattct gcccgcgctg
     3601 gccgtcaacc gcctgtcgcg tatgctggtc aaccgcctgc cacccaatat tttcatcttt
     3661 attttcgtca acggctttct cgcttccgcc gccggcattc tgctgaccgg gctggtgctg
     3721 accggtattt tggatgccgc aaacgctttt ccgtccgaaa tattgtggac gaccgccctg
     3781 cccgtcttta ttctgctggc gtgggcggaa gcttttctca gcggcatttc aactgccata
     3841 tttgttgcac tgaagcccca ttggatcaac actttcgacg acaaccgcta tctgaagtcc
     3901 gaccgcggca tatggcggta gccttcagac ggcatagaca ggcaaaacca tgctttccaa
     3961 catcatcccc ctttccatcg gtgcggcact cggtgcaacg gcgcgttggc tgctcaacct
     4021 cgccgttcct gccgccatgt ctcccgccac gggcaacctg tttgccaact ggacgggcgc
     4081 gctgctcatc ggcatctttg ccgaaaccat caatcacccg caatggaagc tgctgctgat
     4141 taccggtttt ctcggcagcc tgaccacgct ttccggattt tcactggaaa ccgtaaccct
     4201 gctccaatcg aatcgtcctg cttcagcact tgccaatatt ttcctacaca cggcaggttc
     4261 gctgctgctg acttggctcg ggctgaagat aggggcggca gtcaaataac cgcaacaaat
     4321 tgcctccctt tgttttgaca taatctataa attagcttcg cttgtttaaa tactggctgt
     4381 gcca
//
LOCUS       DAWKOX010000159         4371 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.159, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000159 DAWKOX010000000
VERSION     DAWKOX010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.159"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(69..2045)
                     /locus_tag="WJK78_001740"
     CDS             complement(69..2045)
                     /locus_tag="WJK78_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ7598633.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WJK78_001741"
     CDS             2194..3033
                     /locus_tag="WJK78_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ7598634.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALAQIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3233..4264
                     /gene="gap"
                     /locus_tag="WJK78_001742"
     CDS             3233..4264
                     /gene="gap"
                     /locus_tag="WJK78_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ7598635.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         1107 a         1461 c         1012 g          791 t
ORIGIN      
        1 tgaattttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggcctgtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg gcggacggtt
      301 tcgccatttt cgccgaatcc tgcctcatca tcactaccga caaacaaacc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccggta cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg tcagcaccac cattttcgcc cgccccaaac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagcaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccttgtgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatcc ccgccacaaa cgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacggcacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaatac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccaatgc tgaacatcag gaacacaatc
     1861 ccgatttcgc ccaaataatc cgttgcatga cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcataggtc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgtattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc agatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg tgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgtgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat atctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ttgatatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacgcc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa cccctcgaca aaggaacaaa ccatgggcat
     3241 caaagtcgcc atcaacggct acggacgcat cggccgccag gttttgcgcg ccatctacga
     3301 ctatcagatt caagaccaac tccaaatcgt cgccgtcaac gccagcggca gccttgaaac
     3361 caacgcccat ctcaccaaat tcgacaccgt gcacggacgc tttgaagccg acgtatccca
     3421 cgacggcggc aacctcatcg tcaacggcga caaaatcccc ttcttctcga cccgcaaccc
     3481 tgccgaactg ccgtggaaag aactcggtgt cgatttggtc atggaatgca ccggcgcgtt
     3541 caccagcaaa gaaaaagcca aagttcatct ggaaagcggc gcgaaaaaag tcctcatttc
     3601 cgcaccgggc ggcgacgatg tcgatgcaac cgtcgtgtac ggcgtgaacg acagcgtcct
     3661 gaccgccgac atgaccgtcg tttccaacgc ttcctgcacc accaactgcc tctcgccggt
     3721 tgccaaagtg ttgagcgaaa gcgtcggcat cgtcaaaggc gcgatgacca ccatccacgc
     3781 gctgaccaac gaccaaaccg ttaccgacgt gcgccacaaa gacctgcgcc gcgcccgcag
     3841 cggcgtggaa aacatgattc cgaccaaaac cggcgcggca aaagccgtcg gtttggtctt
     3901 gcccgaattg aaaggcaggc tcgacgggct tgccatccgc gtgccgaccg tcaacgtatc
     3961 attggtagat ttgaacttcc aagccgcgcg cgacacgaca atcgaagaaa tcaacgcact
     4021 gatgaaagcc gcctcggaag caggcgcgct caaaggcgtt ttaggctaca acaccctgcc
     4081 cttggtttcc atggacttca accacactac cgaagccagc cacttcgacg caacgctgac
     4141 caaagtcgtt gacggcaaca tgattaaagt cttcgcatgg tatgacaacg aatggggctt
     4201 cagctgccaa atgctgaaca ccgcacgccg tatgttcgga cttgaagtgc gcccgctcaa
     4261 ataagcaata aaccgtcaaa caaaatgccg tctgaaaccc gatgttttca agttccagac
     4321 ggcatttttc atttttggca gtgattttgc ccggctgtcg tcatttctaa t
//
LOCUS       DAWKOX010000160         4358 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.160, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000160 DAWKOX010000000
VERSION     DAWKOX010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4358
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.160"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(148..1191)
                     /locus_tag="WJK78_001743"
     CDS             complement(148..1191)
                     /locus_tag="WJK78_001743"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ7598636.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLGAIPLLP"
     gene            complement(1188..1469)
                     /locus_tag="WJK78_001744"
     CDS             complement(1188..1469)
                     /locus_tag="WJK78_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598637.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQRSDGIPANHTKEKP"
     gene            1723..2877
                     /locus_tag="WJK78_001745"
     CDS             1723..2877
                     /locus_tag="WJK78_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ7598638.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLESASWKDINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHIARQVARFAGAHTIVSGYLAFGSDESYKNHWDPRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTATQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKYEEVRKLIYQLIELDFLEIL"
     gene            3106..3459
                     /locus_tag="WJK78_001746"
     CDS             3106..3459
                     /locus_tag="WJK78_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598639.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANAATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRNWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDGTDYC"
     gene            3520..4146
                     /locus_tag="WJK78_001747"
     CDS             3520..4146
                     /locus_tag="WJK78_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HEZ7598640.1"
                     /translation="MNRPKQPFFRPEVAVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRATNLFIS"
     gene            4098..4298
                     /locus_tag="WJK78_001748"
     CDS             4098..4298
                     /locus_tag="WJK78_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598641.1"
                     /translation="MVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADI
                     LHEKRRLYEWVLELIYSMSGKL"
BASE COUNT         1176 a          984 c         1119 g         1079 t
ORIGIN      
        1 attcccgctt ttgcgggaat gacggtattt tagatttttg ttttcgcgga ataatgagcc
       61 aaaagccgtc cgaacccaaa aaaaccgtcg ctttcagacg gcatcaaaaa accgcaggca
      121 cgatgcctgc ggtttgccgt ttgcgcttca ggggagcagg gggattgcgc ccaagccgtg
      181 tgtttccttc agtccgaaca tgatgttcat attttgcacc gcctgacccg ccgcgccttt
      241 gacgaggttg tcgatgacgg aaaggacgac ccacacatcg gattgcgccg cctgttggat
      301 gctgatgcgg cagaggtttg cgccgcgcac gctgcgggtt tcgggtgtcg aaccggcggg
      361 caggatgtcc acgaacaggc tgtcgcggta atagtcgcgc aggatggttt cggggcagat
      421 gccgtctgaa aggtggaggt aaacggtggc gtgcataccg cgtatcatcg gcgcgaggtg
      481 cggcgtgaac acgaatcctt cggcgatgcc gtcctgaagc ccggcgatgg tctgcctgat
      541 ttcgggcagg tggcggtgtc cagctatgcc gtaggctttg aagttgtcgc cgacttcgca
      601 caacagcgaa ccgacattgc ctttcctgcc cgcgccggac acgccggatt tgcagtcggc
      661 aatcagcggc ataccgggct tcagacggca ttgccgcaac agcggcacga gcggcaggga
      721 tacgcaggtc gggtagcagc cggggttggc gacgaggcgc gcctgtgcga cggcttcgcg
      781 gttgagttcg ctcaatccgt acacggcttg ggaaacgagg ccgggggcgg cgtgggtcat
      841 gccgtaccag tgttcccagg tcggaatgtc ccatatgcgg aagtcggcgg aaaggtcgat
      901 gacgcgcacg ccctgttcaa tcaggcgcgg cgcgtctttc atggcgatgc cgttgggcgt
      961 ggcgaagaag acgatgtcgc attgttccaa acctgcctcg tcgggcgttt ggaaggcgag
     1021 gccgtacacg ccgcgcaaac tcggaaagta atcggcaact gcggttcccg cttcgctgcg
     1081 gctggttacg gcggcgactt cgacatcggg atgggcggca agcaggcgca gcagttccac
     1141 gccggtgtag cccgtcgcgc cgacaatgcc gactttgatt tttttactca tggtttttcc
     1201 tttgtgtggt tggcgggtat gccgtccgaa cgctgtccga cggggttttg attggcggcg
     1261 gaaggacggt acacaaagcg tttgaaaagc gtgtctaatt taatggcatc cgcctctgtt
     1321 tttaaaaccc agccctgccg tccggaataa acataaccgt aggcgcgaaa gccggcagga
     1381 tatttcggtg cctgccccaa acccaaaccg tatgcggcga aagcggtggt cgtggagaag
     1441 gaaagcagga ggaggacgag ggttttcata aggttccaaa ccgaacgggg cgatgaagcc
     1501 cgattatagc aaaaggtcgt ctgaaaaccg ttttcagacg accttttatt taattacaat
     1561 aaaaatgtta acaacaaaaa acaaaccgct tttttccgtt tggagacaaa tttttaacta
     1621 aaattgtcaa caattccttg acgcacacac aaaaaaaact ttaatatttg taaatatatg
     1681 taacattata aattttaaat attttctgag taaggggaag taatgagcat ccatctcgac
     1741 ttcggcatta gtcctaaaac gttccgacag acttatctgt atcaaaagcc caagctcttt
     1801 aaaggagcgg ttcggaatct cgaatccgca tcttggaaag atatcaacga gatataccaa
     1861 cgagcagacc caaccgcacc gctgtttcat ctgcgtaaaa aaggcgcaat cgttcctaaa
     1921 gaagaatacg tcgaaagttt cgacgatttg ggcaaaactc gctaccgttt tattaaatcc
     1981 gttatctacg aacatatgaa gaatggtgcg tcgttagtct ataaccatat taacaacgag
     2041 ccgttttcag accatatcgc ccgtcaagtc gcccgctttg ccggcgcaca tactattgtt
     2101 agtggatatc ttgcttttgg cagcgacgaa tcttataaaa accattggga cccccgcgat
     2161 gtgtatgcca tccagctttt cggcaagaaa cgttggcaac ttactgcccc tgatttccct
     2221 atgccattgt atatgcaaca gactaaagat actgatattt ccattcctga acatatcgat
     2281 atggatatta tccttgaagc aggtgatgtc ctctacatcc cacgcggttg gtggcacaga
     2341 cctatcccgc tcggctgtga aaccttccac ttcgctgtcg gtaccttccc accaaacggc
     2401 tataattacc tcgagtggct aatgaagaaa tttcccacca tagaaagtct gcgccacagt
     2461 ttctcagact gggagcaaga taggacgcgt atcaacgata ctgccacaca aattgctgcc
     2521 atgattgccg accccgtcaa ttatgaagcc ttcagtgaag actttctcgg caaagaacgt
     2581 accgataccg cttttcatct cgaacagttc gcgaatccca acgctactcc gctttcagat
     2641 gacgtcaggt tgagattaaa tgccaataat ttggatacgt tggaaaaggg atatttgatt
     2701 gggaatggga tgaagataag cgtagatgag ttggggaaaa aagtgttaga acacatcggt
     2761 aagaatgaac cgttattgtt gaaaaatcta ctggttaact tcaatcaggg aaaatatgaa
     2821 gaagttagga agttgattta tcagttgata gagttagatt ttctggaaat tttgtgaggg
     2881 attctatgaa aaactggaag caatttacat ttttcgtaat attagtaata gcttgttatc
     2941 aagtgctata ttttttatca gatatgtttc ttctcgacta cattaacaaa tatagttgga
     3001 atttgaattt tattcagggt actttgaatt ttttttcaat atatctgcca tatgtttttg
     3061 ttagccgaat ttttaggaat accaaccaag aaaaggagta taaaaatgat tgaacttcaa
     3121 cttcatgaat tgaagctggt ttcaggggga ggtcctgtaa cagacaatat agctggaaat
     3181 gtagctaatg ctgccacaac caaaggaggt cccacatggg gggatttggt tgcaatacct
     3241 gctgccgcag cggcagttta ttatctgccg aaaaatgctt acggtgctgc tggtgcaaat
     3301 ggtgtataca atgtgactcg taattgggta aatgatgccg ttaatgcacc tccttataac
     3361 ggaagaccaa tctttgagat tgaacatgga ttaactgctc ccgcaacaaa agcagataaa
     3421 tcaggaaacg gctacactga cggtacagat tactgctgat atttctcatc gtccagacaa
     3481 tctctagggg tcgtctgaaa ctttcttaac ttcaatttta tgaatagacc caagcaaccc
     3541 ttcttccgtc ccgaagtcgc cgttgcccgc caaaccagcc tgacgggtaa agtgattctg
     3601 acacgaccgt tgtcattttc cctatggacg acatttgcat cgatatctgc gttattgatt
     3661 atcctgtttt tgatatttgg taactatacg cgaaagacaa cagtggaggg acaaatttta
     3721 cctgcatcgg gcgtaatcag ggtgtatgca ccggatacgg ggacaattac agcgaaattc
     3781 gtggaagatg gagaaaaggt taaggctggc gacaagctat ttgcgctttc gacctcacgt
     3841 ttcggcgcag gaggtagcgt gcagcagcag ttgaaaacgg aggcagtttt gaagaaaacg
     3901 ttggcagaac aggaactggg tcgtctgaag ctgatacacg agaatgaaac gcgcagcctt
     3961 aaagcaactg tcgaacgttt ggaaaaccag aaactccata ttttgcaaca gatagacggt
     4021 cagaaaaggc gcattagact tgcggaagat cagtggcaaa aacggcactg ggcagacagg
     4081 aattgtcggg attgggcatg gtatcctccg atttggcgaa gagcaacgaa cctgtttatc
     4141 tcgtgaaaat aaaacccgac aaaccaacca tcactgcata cggtgaggaa aaaccgctgc
     4201 aaatcggcat gacgttggaa gcagacatcc tacacgagaa acggcgattg tacgaatggg
     4261 tattggagct gatttatagt atgtcgggca aactgtaaga cttgaggctg taaagataaa
     4321 gaagttgtct gaaacctttt cagacgacca gaagacaa
//
LOCUS       DAWKOX010000161         4263 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.161, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000161 DAWKOX010000000
VERSION     DAWKOX010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.161"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            38..461
                     /locus_tag="WJK78_001749"
                     /pseudo
     CDS             38..461
                     /locus_tag="WJK78_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            567..1130
                     /gene="pgsA"
                     /locus_tag="WJK78_001750"
     CDS             567..1130
                     /gene="pgsA"
                     /locus_tag="WJK78_001750"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ7598642.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1210..1285
                     /locus_tag="WJK78_001751"
     tRNA            1210..1285
                     /locus_tag="WJK78_001751"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1243..1245,aa:Gly,seq:gcc)
     gene            1311..1386
                     /locus_tag="WJK78_001752"
     tRNA            1311..1386
                     /locus_tag="WJK78_001752"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1344..1346,aa:Gly,seq:gcc)
     gene            1410..1485
                     /locus_tag="WJK78_001753"
     tRNA            1410..1485
                     /locus_tag="WJK78_001753"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1443..1445,aa:Gly,seq:gcc)
     gene            1507..1582
                     /locus_tag="WJK78_001754"
     tRNA            1507..1582
                     /locus_tag="WJK78_001754"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1540..1542,aa:Gly,seq:gcc)
     gene            1608..1681
                     /locus_tag="WJK78_001755"
     tRNA            1608..1681
                     /locus_tag="WJK78_001755"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1640..1642,aa:Cys,seq:gca)
     gene            1784..1873
                     /locus_tag="WJK78_001756"
     tRNA            1784..1873
                     /locus_tag="WJK78_001756"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1818..1820,aa:Leu,seq:taa)
     gene            1977..3029
                     /gene="sohB"
                     /locus_tag="WJK78_001757"
     CDS             1977..3029
                     /gene="sohB"
                     /locus_tag="WJK78_001757"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ7598643.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3080..4050)
                     /locus_tag="WJK78_001758"
                     /pseudo
     CDS             complement(3080..4050)
                     /locus_tag="WJK78_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
     gene            complement(4061..4180)
                     /locus_tag="WJK78_001759"
     CDS             complement(4061..4180)
                     /locus_tag="WJK78_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ7598644.1"
                     /translation="MQRSHKVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1090 a         1017 c         1098 g         1058 t
ORIGIN      
        1 tcgctgggta tggtttgccg ccataagctg tctgctgttg tccgccgttt ttattgcacc
       61 ttacctgacg gcatttcacg aacaagaaaa aacattagaa tatgcggaat tgaccgttac
      121 cgcccccaac cgcagcggac gggcaatcaa actggatgca gacgggcagc attaccggct
      181 ttcctgctat gggttcgaca gtttgtgcac aggcggcaat atcggcagaa ccatcagggc
      241 ggagcaggtt agagccgttt taagcgaaac cgtcggcaaa ggttttttaa acggcgttct
      301 gttggaatac cgcaacagtg gcagtgtcta taagcaataa agattttgcc cgcacggaag
      361 accgccttgt cgaagtgttg gcacaacctg ccgttttcag cctgaaactg ggtattttgc
      421 ttttattgcc cgccattttc ctgcgtttga aaagaatgtg aaaacagatt ggcggggcgg
      481 gggaatgccc atgcagcaat tttacgtttt gggttatgag gataaccgtt ataatcacaa
      541 ctttacagtc tgcacagaga aaatcgatgc cttggaatct ccccatcttc ctcacatggt
      601 tgagggtctt gctcattcct gtcatgacag ccctttttta cctgcctttt ccgtggttcg
      661 cggaggaaac gattaatctc accgccgccg tcatttttgc cgttgccgcc ttaaccgact
      721 ggtttgacgg atttttggca agactgtgga aacagacttc cgatttcggc gccttcctcg
      781 atcccgtcgc cgacaagctg atggttgccg tatcgctact tttactggtc aaactcgacc
      841 ggacctatgt tttgtttgcc atgatcatta tcggcaggga aattaccatt tccgcattgc
      901 gcgaatggat ggcgcaaatg ggcaaaagga acagcgttgc cgtcgccacc gtcggtaagt
      961 tcaaaaccgc cgcgcaaatg ctggcaatct tcctgctgct gctgaatatt cccgattttt
     1021 acggatttaa tcttgttgtt atcggcaatg tattgatgtt tatcgcatct ttgctgacag
     1081 tctggtcgat gctgtattat ctgaaaatgg cgtggaaaga aatcgcctga aaaaaacata
     1141 aaaatagctt gacggcaaaa acagaatcca taataattgc gtctcttcga tgttggagaa
     1201 tgaaatcggg cgggaatagc tcagttggta gagcgcaacc ttgccaaggt tgaggtcgcg
     1261 agttcgagac tcgtttcccg ctccaaaaat ttcattttcc cacaatcatt gcgggaatag
     1321 ctcagttggt agagcgcaac cttgccaagg ttgaggtcgc gagttcgaga ctcgtttccc
     1381 gctccaagtt ttatttcaaa catatcaacg cgggaatagc tcagttggta gagcgcaacc
     1441 ttgccaaggt tgaggtcgcg agttcgagac tcgttttccg ctccaaaaac cgatatgttt
     1501 gaacgcgcgg gaatagctca gttggtagag cgcaaccttg ccaaggttga ggtcgcgagt
     1561 tcgagactcg tttcccgctc caagtttttt agataagcca gttttagggc gagatagcaa
     1621 agtggttatg cagcggattg caaatccgtc tacgccggtt cgattccgac tctcgcctcc
     1681 attatcgtac tatggcgggg tggcagagtg tttatgctat gaggagtgca atcttcatat
     1741 aggccggtta aaatccgcgc ccccgcctcc acctttcaca aatgcccggg tggtgaaata
     1801 ggtagacaca acggacttaa aatccgtcgg gactaaacat cccgtgccgg ttcgattccg
     1861 gctccgggca ccaagctgaa aatgacaatg ccgctccaag cggttatttt tttatctgtc
     1921 ggacggtgat ggacaatatt gacatgttca tgcctgaaca agaggaaatc caatcaatgt
     1981 ggaaagaaat tttactgaat tacggtattt tcctgctcga actgcttacc gtgttcggcg
     2041 caattgcgct gattgtgttg gctatcgtac agagtaagaa acagtcggaa agcggcagtg
     2101 tcgtactgac ggatttttcg gaaaattata aaaaacagcg gcaatcgttt gaagcattct
     2161 ttttaagcgg ggaagaggca aaacatcagg aaaaagagga aaagaaaaag gaaaaggcgg
     2221 aagccaaagc agagaaaaag cgtttgaagg agggtgggga gaaatctgcc gaaacgcaaa
     2281 aatcccgcct ttttgtgttg gattttgacg gcgatttgta tgcacacgcc gtagaatcct
     2341 tgcgtcatga gattacggcg gtgcttttga ttgccaagcc tgaagatgag gttctgctta
     2401 gattggaaag tccgggcggc gtggttcacg gttacggttt ggcggcttca cagcttaggc
     2461 gtttgcgcga acgcaatatt ccgctgaccg tcgccgtcga taaggtggcg gcgagcggcg
     2521 gttatatgat ggcgtgtgtg gcggataaaa ttgtttccgc tccgtttgcg attgtcggtt
     2581 cggtgggtgt ggtggcggaa gtaccgaata tccaccgcct gttgaaaaaa catgatattg
     2641 atgtggatgt gatgacggcg ggcgaattta agcgcacggt tacttttatg ggtgaaaata
     2701 cggaaaaggg caaacagaaa ttccgacagg aactggagga aacgcatcag ttgttcaagc
     2761 agtttgtcag cgagaaccgc cctcaattgg atattgagga agtggcaacg ggcgagcatt
     2821 ggttcggtcg gcaggcgttg gcgttgaact tgattgacga gatttcgacc agtgatgatt
     2881 tgttgttgaa agcgtttgaa aacaaacagg ttatcgaagt gaaatatcag gagaagcaaa
     2941 gcctgatcca gcgcattggt ttgcaggcgg aagcttctgt tgaaaagttg tttgccaaac
     3001 ttgtcaaccg gcgggcggat gtgatgtagt ttgccgaacg gatggaaatg ccgtctgaag
     3061 cgtgttcaga cggcattttt caagttccgg ctttgatgtt ccgttccgac cactctatcc
     3121 gttgtccgat gtctttcaaa ttggaatatt gttcgaccaa tcgcggcacg tcgtccaaac
     3181 tcatggcaaa catccacaga taagtgccga ccgaatagac atgccccgcg ctgctgtagc
     3241 ctttgagcgt catcatcaca aaagcaaagc cgaacaaaat acccatcgcc gtgccgacgc
     3301 agagatagcc gaaggcttcg cggttggaaa tcagcacacg caggcgcgca agcagtccgt
     3361 aatggcggta cagctgccgc cggtcgcctt ttcggataaa gtggttgtcg cgttccaagc
     3421 tgttcttcag gcggaaatac aggttttcgc tgatggccgc aaaacgtggc aaaagccata
     3481 aaaacaacgc aagtatgccc accgccgaca cgccgaccca aaattccagc accagcagca
     3541 tgatgcacgc gccgaatatg gatacgacgg atgtcgcggc aatcggcagg tgttcttcaa
     3601 aaaagctgac aaactcacgc gacagggcaa cccgcgcagt tatagtggat taacaaaaat
     3661 caggacaagg cgacgaagcc gcagacagta caaatagtac ggcaaggcga gacaacgccg
     3721 tactggttta aatttaatcc actatattgc cgaatgcggg acttaccgct gccgctgttc
     3781 caacacaacc ggcacggcga tttcggtata aatccgcgta aacgtgcgtg tatcggcaat
     3841 ccgccgcgcc gcaccgacca gccacattaa aagcacaacc aaagcgtaca gcaacgcctg
     3901 ccacacctcc cccgcaatca cggcattgat cgcccggccg ccaaacaccg gatacaccag
     3961 catcaaaagg ttttccagtc cgaccaggga aaatgtgcca atcaatcgct tgcggtgggt
     4021 ttgggctatg tgtttcaaca ttttccacat atttgccccc ctatttttta ttttccgaga
     4081 ttgttttttc catcacttca gccagtgcat ccaaatcggc aaacagccgg gttgtgcgct
     4141 tgtcgccgaa tgtggcaaat actttgtgag acctttgcaa aattcctttc cctcccgaca
     4201 gccgaaaccc aaacacaggt tttcgtctat tttcgctcct aattactcct aattctaccc
     4261 aaa
//
LOCUS       DAWKOX010000162         4221 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.162, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000162 DAWKOX010000000
VERSION     DAWKOX010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4221)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4221)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4221
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.162"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1..321)
                     /locus_tag="WJK78_001760"
     CDS             complement(1..321)
                     /locus_tag="WJK78_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HEZ7598645.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLPARLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYSRIEMQSDTVLQAGIWRGTSCPT
                     ARSI"
     gene            517..975
                     /locus_tag="WJK78_001761"
                     /pseudo
     CDS             517..975
                     /locus_tag="WJK78_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            875..1243
                     /locus_tag="WJK78_001762"
     CDS             875..1243
                     /locus_tag="WJK78_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ7598646.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDNLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLVGGVLVAHNLGLLHDFLHAQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            1312..2850
                     /gene="lnt"
                     /locus_tag="WJK78_001763"
     CDS             1312..2850
                     /gene="lnt"
                     /locus_tag="WJK78_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ7598647.1"
                     /translation="MFSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFSLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            3114..3977
                     /gene="rpoH"
                     /locus_tag="WJK78_001764"
     CDS             3114..3977
                     /gene="rpoH"
                     /locus_tag="WJK78_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ7598648.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(4036..4182)
                     /locus_tag="WJK78_001765"
     CDS             complement(4036..4182)
                     /locus_tag="WJK78_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598649.1"
                     /translation="MLIHYINSANLSEKQLMRQCLVHVCFLISAIAMVWTDKIVYGTT
                     HKPH"
BASE COUNT         1035 a         1307 c          969 g          910 t
ORIGIN      
        1 ctatatcgac cttgccgtcg ggcaggatgt accacgccaa atccccgcct gaagcacggt
       61 gtcggactgc atttcgattc ggctatacgc cttttcacgc aggctgtaat tgaatttcca
      121 caaaccgccg aacactgccg gcggacgcgc gaccagcatc aggaacgccg caatcgccaa
      181 ggcttccgcc gccccgtcca acacgccggc gggagaaacc agcagcaaag gcattcccaa
      241 acgtgcgggt aaagtggtcg aaaccacgct cagaaacaac agtgcgccac ccggcaggaa
      301 cagactgccc atccaatcca cgctaacgat tctcccttaa aattcatgaa attaaaatcg
      361 aaagactgta acacggcatt ttcttttcac gaaactttac ttcacgtccg ccacagcgtt
      421 cagacggcat tttcctgttt catgccgcct gaaaccgccc aaatccgcgt tctcctatat
      481 aatgtcggac tttgcgccgc atttcaggat tctttaatgg catttgcctc actatttacc
      541 ctgccggacg acatcaccgc cgttttggac gatgttgccc tgatgaccaa agccgccgca
      601 aagaaaaccg ccggcgtggt cggcgacgat ttggcaccca atgccaaccg ggttacgggc
      661 gtatcggcag aacgcgagtt gccgattgtt tggtcgatgg cgaaaggttc tttttccaac
      721 aagccggttt tggtgcctgc ggccctgctg ctttccgcct tcctgccgca actcattacg
      781 ccgcttttga cggcaggcgg catttatctg tgctttgacg gcgtagaaaa gctgctgcac
      841 aagtttctgc accgacatga cgcgcatgct cgtaatggcg gcaatcggca tcggcatgac
      901 tgttttggtg tacggaatcg ttgccgtcat cgtcaaactc gacaacttag gcatgctgct
      961 gatgcgccgc ccacaaacct tttcgcgcag tttggggcaa atgctgactg cctttatgcc
     1021 ttgctttatg cgcggtttga gcgtggtcgg cacgcttgcc atgtttcttg tcggcggcgt
     1081 actggtcgcc cacaacctcg gccttctgca cgatttcctg cacgcgcaac actgggacgc
     1141 tggctgggcg gagtacttcg ccaacctcgt tgtcgggctg ctttccggtt cgattgcctg
     1201 cgcccccgcc ttgccgctga tgaatcgttt cggcaggcat tgatttcttt ttcaaatacc
     1261 gatgccgttt gaaagatgtt cagacggtat cttccgaaca gacagatgaa tatgttttcc
     1321 aaactggaca aatactggca gcaccccgcc ctctactggc ctttgctcat cctttttgcc
     1381 gccgccaccc cctttacctt cgcaccctac taccactttt ggctgatgcc cttgattttc
     1441 ggtgccttcg tccgcctcat cgaactgcgt ccgcgttttg ctgtctcttc cgcctacctg
     1501 ttcagcctga ccgcatacac gacacagttc tactggatac acaccgccct gcacgacgtt
     1561 tccggcctgc ccgacctcta tgccgtaccg ctgactttcc tactccccgc ctaccttgcc
     1621 ctttatccgg cactgtgttt ctggctgtgg aaaaaattta ccctgcctcg gggcataaaa
     1681 atcggtttgg tactgcccat cctgtggaca ctgaccgagt ttgcccgcga acgtttcctg
     1741 accggattcg gctggggcgc aatcggctac tcccaaatca ccccggacag cccgctcgcc
     1801 ggctttgccc cattgggcgg catccacatg gttacactgg caaccgcctt tctcggtgtc
     1861 tggctggttt tggcgagtga taacaccgca cgttcgggca aacgcctgct tccaattatc
     1921 ctgattgccg ccctgcttgc cgcaggctac accgcccgac aaaccgactt cacccgcccc
     1981 gacggcagcc gcagcaccgt cgccctgctt caaggcaaca tcgaccaaac cctcaaatgg
     2041 cgtgaagacc aagtcatccc gaccatacag aaatattacg aacaggtcgg caaaaccact
     2101 gccgacatcg tcatcctgcc cgaaaccgcc atccccgtta tgcgccaaaa cctgccggaa
     2161 aacatactgg caaaatttgc cgaacaggcg caaaacaacg gcagcgcgct cgccgtcggc
     2221 atcagccaat acacttcgga cggcaacggt tacgaaaacg ccgtcatcaa cctgaccggt
     2281 tatcaggaaa acaatcagga cggcatcccc tactacgcca aaaaccacct cgtccccttc
     2341 ggcgaataca aaccgctgcc cttcctgacc acgccgcttt acaaaatgat gaatatgccc
     2401 ctttccgact tccgcaaagg cggcggtaag caatccgccc tgctgatgaa aaaccaaaaa
     2461 atcgccttca acatctgtta cgaagacgga ttcggcgacg aactgattgc cgccgccaaa
     2521 gatgccaccc tgcttgccaa tgccagcaat atggcgtggt acggaaaatc caacgccatg
     2581 taccagcacc tccaacaatc gcaggcgcgg gctatggaac tcggacgcta tatggtccgt
     2641 gccaccaaca ccggcgcaac cgccatcatc tcccccaaag gcaacatcat cgcccaagcc
     2701 caacccgata cggaaaccgt attggaagga cacatcaaag gctatgtcgg cgaaacgccc
     2761 tatatgaaaa ccggcagttc atggtggttg atgggcatat tgaccctagc cgcactgatt
     2821 cttttcatct tccgaaacaa agaacactga tacctgcaca gcccgtccgg acgggctgtc
     2881 ttttttcaaa acggctattt acatacaatt acgtatgtaa tataattctg aaatcgaatt
     2941 gagccatcag gtttacaaaa tcaatcaaac ctgccttaca aaattttcct gtctttcaaa
     3001 ccttagcgca tatctcctgc caaacataca aaatacaagc caagcagtga tatactgcat
     3061 cccaacacag caaaccgccg atacgcagtt tcagccgaaa ggaaatgccc caaatgaata
     3121 acgctttcgc attacccgcc atccaaagcg gcaacggcag cctcgaacaa tacatccaca
     3181 ccgtcaacag catcccgatg ctgtcccagg aagaagaaac ccgcctcgcc gaacgccgga
     3241 taaagggcga cctcaacgcc gccaaacaac tcatcctgtc ccacctgcgc gtcgtcgttt
     3301 ccatcgcgcg cggctatgac ggctacgggc tgaatcaggc agacctgatt caggaaggca
     3361 atatcggact gatgaaggcg gtcaaacgct acgagcccgg tagaggcgcg cgtctgtttt
     3421 catttgccgt acactggatt aaagccgaaa tccacgagtt tattttgaga aactggcgtt
     3481 tggttcgcgt tgccaccacc aaaccgcaac gcaagctgtt tttcaattta cgcagtatgc
     3541 gtaaaaacct caacgccctg tctcccaaag aggcacaaga catcgccgac gatttgggtg
     3601 tcaaactttc cgaagttctg gaaatggaac agcgcatgac gggacacgac atcgccatca
     3661 tggcagacaa cagcgacgac gaggacagtt tcgcccccat cgactggctt gccgaccacg
     3721 attccgaacc gagccggcaa ctatcgaaac aggcgcatta cgccctgcaa acagaaggtt
     3781 tacaaaacgc tttggcgcaa ctggatgaca ggagccgccg tattgtggaa agccgctggc
     3841 ttcaagacga cggcgggctg acgctgcacc agcttgccgc cgaatacggc gtatctgccg
     3901 aacgcatccg ccaaatcgaa gcaaaagcca tgcagaaact gcgtggtttc ctgaccgaag
     3961 aagccgaagc ggtttgaaat atacgcaata aaatacccga caaattgttt tgtcgggtat
     4021 tttatttggt aaacatcaat gcggtttgtg cgtcgtgccg tacacgattt tatccgtcca
     4081 aaccatcgca atcgccgaaa tcaaaaagca gacatgcacc agacactgcc gcatcagctg
     4141 cttttccgac agattggcgg aattgatata gtggattaac aaaaatcagg acaaggcggc
     4201 gaagccgcag acagtacaaa t
//
LOCUS       DAWKOX010000163         4128 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.163, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000163 DAWKOX010000000
VERSION     DAWKOX010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4128)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4128)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4128
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.163"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            43..675
                     /locus_tag="WJK78_001766"
     CDS             43..675
                     /locus_tag="WJK78_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ7598650.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAASLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="WJK78_001767"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="WJK78_001767"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ7598651.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGLLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2198..4066
                     /locus_tag="WJK78_001768"
     CDS             2198..4066
                     /locus_tag="WJK78_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ7598652.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVMIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSHGGALQ"
BASE COUNT          944 a         1120 c         1069 g          995 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcagcc
      601 tctttgttcg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 acggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaagcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gccgaccact ttgggcaaag aaaccgccaa tgtcgtgtac cgcctgcaac
     1321 gccagtttaa aaacctgcaa gcgcaagagt tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtc gcctatcctg atgtagattg ggaaacccac tgccgcaact
     1441 tcgtcgaaat cagcctcggt ctgaccttca acccctacac catccaaatc gagccgcacg
     1501 actatatggc ggaattcttc caaaccctca gccgcatcaa cacgattctg atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggctc atcgaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgagg
     1681 gcaacctcgg tatggccaat gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gctggcagcg cgacctgacc gacagcaccg tattgcgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcccacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgctgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat cacgcccgaa gtgctgaaag gctttatcgg attgctggaa atccccgccg
     2041 aagccaaagc caaattgctt gagctgaccc ccgcgctgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacgggggc gatatttatg caagctgtcc gatacagacc
     2221 ggaaattgac ggattgcggg ccgtcgccgt gctatccgtc atgattttcc acctgaataa
     2281 ccgctggctg cccggaggat tcctgggggt ggacattttc tttgtcatct caggattcct
     2341 cattaccggc atcattcttt ctgaaataca gaacggttct ttttctttcc gggattttta
     2401 tacccgcagg attaagcgga tttatcctgc ttttattgcg gccgtgtcgc tggcttcggt
     2461 gattgcctct caaatcttcc tttacgaaga tttcaaccaa atgcggaaaa ccgtggagct
     2521 ttctgcggtt ttcttgtcca atatttatct ggggtttcag caggggtatt tcgatttgag
     2581 tgccgacgag aaccccgtac tgcatatctg gtctttggca gtagaggaac agtattacct
     2641 cctgtatcct cttttgctga tattttgctg caaaaaaaca aaatcgctac gggtgctgcg
     2701 taacatcagc atcatcctat ttctgatttt gactgccaca tcgtttttgc caagcgggtt
     2761 ttataccgat attctcaacc aacccaatac ttattacctt tcgacactga ggtttcccga
     2821 gctgttggca ggttcgctgc tggcggttta cgggcaaacg caaaacggca gacggcaaac
     2881 agcaaatgga aaacggcagt tgctttcatc actctgcttc ggcgcattgc ttgcctgcct
     2941 gttcgtgatt gacaaacaca atccgtttat cccgggaatg accctgctcc ttccctgcct
     3001 gctgacggca ctgcttatcc ggagtatgca atacgggaca cttccgaccc gcatcctgtc
     3061 ggcaagcccc atcgtatttg tcggcaaaat ctcttattcc ctatacctgt accattggat
     3121 ttttattgct ttcgcccatt acattacagg cgacaaacag ctcggactgc ctgcagtatc
     3181 ggcggttgcc gcgttgacgg ccggattttc cctgttgagt tattatttga ttgaacagcc
     3241 gcttagaaaa cggaagatga ccttcaaaaa ggcatttttc tgcctctatc tcgccccgtc
     3301 cctgatactt gtcggttaca acctgtacgc aagggggata ttgaaacagg aacacctccg
     3361 cccgttgccc ggcgcgcccc ttgctgcgga aaatcatttt ccggaaaccg tcctgaccct
     3421 cggcgactcg cacgccggac acctgcgggg gtttctggat tatgtcggca gccgggaagg
     3481 gtggaaagcc aaaatcctgt ccctcgattc ggagtgtttg gtttgggtag atgagaagct
     3541 ggcagacaac ccgttatgtc gaaaataccg ggatgaagtt gaaaaagccg aagccgtttt
     3601 cattgcccaa ttctatgatt tgaggatggg cggccagccc gtgccgagat ttgaagcgca
     3661 atccttccta atacccgggt tccaagcccg attcagggaa accgtcaaaa ggatagccgc
     3721 cgtcaaaccc gtctatgttt ttgcaaacaa cacatcaatc agccgttcgc ccctgaggga
     3781 ggaaaaattg aaaagatttg ccgcaaacca atatctccgc cccattcagg ctatgggcga
     3841 catcggcaag agcaatcagg cggtttttga tttggttaaa gatatcccca atgtgcattg
     3901 ggtggacgca caaaaatacc tgcccaaaaa cacggtcgaa atacacggac gctatcttta
     3961 cggcgaccaa gaccacctga cctatttcgg ttcttattat atggggcggg aattccacaa
     4021 acacgaacgc ctgcttaaat cttcccacgg cggcgcattg cagtagcctg ccttcttgtc
     4081 ggatattgcc tttggcagcc tatgccgctg tttgccgttc ggggcggc
//
LOCUS       DAWKOX010000164         4008 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.164, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000164 DAWKOX010000000
VERSION     DAWKOX010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4008)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4008)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4008
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.164"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..248)
                     /locus_tag="WJK78_001769"
     CDS             complement(<1..248)
                     /locus_tag="WJK78_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ7598653.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELD"
     gene            complement(251..1516)
                     /locus_tag="WJK78_001770"
     CDS             complement(251..1516)
                     /locus_tag="WJK78_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ7598654.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKLEQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            complement(1483..1697)
                     /locus_tag="WJK78_001771"
                     /pseudo
     CDS             complement(1483..1697)
                     /locus_tag="WJK78_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235355.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2737..2973)
                     /locus_tag="WJK78_001772"
     CDS             complement(2737..2973)
                     /locus_tag="WJK78_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ7598655.1"
                     /translation="MKELHTSELVEVSGGKFHIFAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGISKKW"
BASE COUNT         1236 a          726 c          696 g         1350 t
ORIGIN      
        1 tcatctaact ctaaacgcaa agctcgtggc gttaaattca tttcattgcc aaatctcatg
       61 atgtctgcaa gatttgcgcc ctttaatgac agggtgtatt tttggcgtaa cgttcttaaa
      121 tcagtgtgaa agccataata ggacaagatg gatgtcaggc atgctaaacc acattcagca
      181 acttctgttt gcagaatgac aggtagcttt ttgttaaatc caaaggacag tcttgataaa
      241 taatccattt ttaattgatt tttcctgaaa tgctgtaaag tgggtcaagt acccattcgt
      301 acaatttttt tcgttcatgg agaatatctg cttctaaaat catgccaatt tgaagcggct
      361 tgttttctcc gtatgcttta atcgtttgtt tttccaattt aactttcaca agataggcag
      421 gttcatttaa taaggttggg ttagtgaaaa tgatacctaa acctgatagc tcttgtttac
      481 cgagagcagt tctggcaact gaaataattt ctcctgtggc atgtccaaat ttttggtaag
      541 ggtacgcttg gtaacgtaaa acaactttat ctttcggttt aataaaacca acagctttac
      601 tgggtatgta aagattggcg accaattcag tttgttcagg gacaatgctt aacagcaatt
      661 tagacggttc aacttgttgc cctatatcaa cattaattgt tgatatataa cctgatttac
      721 tagctcgtat ggtttgttcg gatttcaaat caaaatccaa aatttcttgg ttcatttccg
      781 taatcgcacg gttgagttgg ctcaattcgg ttttatggcg ttcaggcagg ctgcttaatg
      841 taattttctg ttcatcaagt tccctgattg cattattttg ttcaagtttt aggctctcca
      901 aacgtgagcg ttgttccaat aaatggcttt cggcggtcat cttatcttgt tgggatactg
      961 cgccttgact ggctaaaaac ttgttcttgt taagggtttt ttccgctaaa cgaatttgac
     1021 gattttgccc tgtaatttgc tgtttaatat tctctaattg attgtttaaa cgatgaatgt
     1081 tgttatgaac atttttttgc tcattttgat gaatgcgctt taaacgttcc aattcttgta
     1141 atgccaaagt ttttttaagg ttggcttctg ctgccaattt ggcttgtacg tttccttttt
     1201 cgccaaaacg cgatgtggaa agtttgaaca atggttcgcc agctttgaca aagttaccat
     1261 cttcaacaaa tttatgcgta atcgtgccga tatcggaaga gtaaacacga accaccccca
     1321 tagttggaag taattgacct tcaacggttg ttttattggt atagctacca aaaatcaaaa
     1381 agataatgat acacagagca atgagaaaag cgcaaaaagt cagaaataaa aaagagaatg
     1441 gacgggtcaa gataacctga cctgtccact tattttgttg ggctacaaag acttcttttc
     1501 ggaataagtg ggacatttat tattatttct taaaaaaatg gatagaaaaa caccaataat
     1561 taaatactta tgcctaataa cataaatttg ctattgattg atgtttctat tttaattaca
     1621 ttaaatttaa ccaataatcc agaaatggtt gcagctaaaa tgcaaaagac agtggcgtaa
     1681 atggtttcag tattcataat ttttctcttt caaaattgtt caatctaaat agaaaaaggt
     1741 aacttcaata catattgctg taactgaaat taccttttcc ttaatgatgt aattatctta
     1801 tggcttcatc atgccacgac cgatattgta tccgccagca gcagagaaaa taccagctcc
     1861 aattgcgcca acccagccta ctggtcctgt ccacttgttc cgttgagcta caaagacttc
     1921 tggtctgaaa aatgagtgat tgttagacat gtgtacttat ttatgtttct ttgattggga
     1981 taaatttgta aaaacaaaaa aaaggcaagt tgttattata gaagaactta aaatgcttaa
     2041 catactcatt gaggtttgta ccacataatg agatacgaga taatttgttg ggagtaaaat
     2101 caaaaaaaga ttaaatattt aaaataatca ctatattttt tcattatttg ttcctttttg
     2161 tatttaagtt cttatgaaaa actagggtat tttgaataga aaatatcaaa ataccctagt
     2221 tttattaagg aatattacca ccaacaagtg cttccatatt gtacagcacc agtgattgca
     2281 ccaccaatag ctccgaattt cgcacctgga atagcaccaa taccacctgc aaatgaacca
     2341 acaattgccc caccagctgc tccacctaat gcactaccaa tggtattttt tgagaaatca
     2401 cgccagttac aagcagcacc agaaacttat tgaatttcat tcaaagtcaa aacttgcata
     2461 atattcacct ttgttaagtg tggttgagaa aaaagtaaat tttcatcgtt actcattatt
     2521 tgcaatcatg catatactgt aaccaagcac tatattcagt tggatcatag tttttcctac
     2581 tgggttgtct gatatgacta ttggcactat tggcacaatt gggattagca actttattgt
     2641 gagtacctaa tggattgata tttcctgtaa agtggctatt gcatgcgctt aatgagcata
     2701 gatttattaa tgtcagaaag gataaaacaa aaaatcttac cattttttac taataccaaa
     2761 agtaggtttc gaaaactgta caccaagacc ttgtacatat ccaaattgct tgctaacaga
     2821 aaactctact ccactattgt taggggaata ggaagcacca attttaccaa cagcaaccat
     2881 atctttttta cctaggttgc cgccaccctg tgcaaagata tggaatttgc cacctgacac
     2941 ttcaactaat tcagaggtgt gtaactcttt catgattttc tcctgtaaag aagtatggtt
     3001 ggaaatgtaa atcagaatta acctttctta agtttaattt aatacttttt ttgcaagtat
     3061 tttattttaa attaaatcaa tattttaaaa atatttactt gtatactgaa tatttacttg
     3121 tatactgaaa aagaaactcc taatggtgga gtggggcttt tgtttaagta agcattgaaa
     3181 aaatttaaat ttcccattat gattaactta atgcaagagc tttttcagga cgtacaaacc
     3241 agcgaacggg cgttctgatg tgggcaggtt ggttgtcgct aaccaatttc agtagctcaa
     3301 tcgtcagatt ggtatccggc cctatcaagc taaggagagg ctgcggctac tacacaaagc
     3361 acctgaaatt attgggtgct tttgtctttt tatggcattg taccaatttg tgtaccacga
     3421 gggcttgttc gcccaaacgc ggtaacaact gaatacacac tttccccctc aacttctttg
     3481 cgttctaaaa cgactgtccc aatccgagaa tagacaatca taggacgatg attgcccctt
     3541 acatcactaa attcactaaa aatttttgcg cctgattgaa aaatcatttc cacataaaag
     3601 ggttacacct gtttcatcgt ggcttaatcc aaaccgcgtt aaatctgctt tgtgttctgc
     3661 caaaatgtga atcacaccaa agccgtgatt aacctttttg tgttcgccgt gttttaaaac
     3721 aatttgacct gccgagaagt ctgctctatt gttcggacaa tagggggaat ataccaatta
     3781 ctttaactac atcatttttt gacatttttc ttgcctttca atttaaaatc caaaatcata
     3841 ctgccataat ttagcaatcc aaaaaaattt aggcagcagt catggtttcg tattttagaa
     3901 aacgaaactt ggtttggtgt tttgaagcat ttcagtacac aaacatggaa ttttaaattg
     3961 tcttgtgttg ccttgattta ggatgttcca gttttttaat aaatagtt
//
LOCUS       DAWKOX010000165         4000 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.165, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000165 DAWKOX010000000
VERSION     DAWKOX010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4000)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4000)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4000
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.165"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(64..1314)
                     /locus_tag="WJK78_001773"
     CDS             complement(64..1314)
                     /locus_tag="WJK78_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ7598656.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSAIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLENVRKQITALCDKYTVYGA"
     gene            complement(1381..1576)
                     /locus_tag="WJK78_001774"
                     /pseudo
     CDS             complement(1381..1576)
                     /locus_tag="WJK78_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1795..3570)
                     /gene="ggt"
                     /locus_tag="WJK78_001775"
     CDS             complement(1795..3570)
                     /gene="ggt"
                     /locus_tag="WJK78_001775"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ7598657.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGNYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(3738..4000)
                     /locus_tag="WJK78_001776"
                     /pseudo
     CDS             complement(3738..4000)
                     /locus_tag="WJK78_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin, Grx4 family"
BASE COUNT          997 a          951 c          943 g         1109 t
ORIGIN      
        1 gcctgaaaca ttgtgagatt tcaggcggca ttggattgct tggcggaata tttttaaaaa
       61 ggcttacgcg ccgtaaacgg tgtatttgtc gcagagggcg gtaatctgtt tgcggacgtt
      121 ttccagattc gcttcgtctt cggggttaga caatacgtcg gcaaccaagt tcgccaatac
      181 gcgcgcgtcg gcttcgttaa aaccgcgtgt ggtcatggca gcggagccga tgcggatgcc
      241 ggaggtaacg aagggttttt ccggatcgtt cgggatggcg tttttgttga cggtgatgtg
      301 cgctttgccc aaagcggctt cggcggcttt accggtgatt ttcatcggtt gcaggtcgac
      361 gaggaaaacg tggctttcgg tgcggccgga aacgatgcgc aaaccgcgtt taaccaactc
      421 ttctgccatg gcggcagcat tgattttcac ttgttttgcg tattgtttga actcgggttg
      481 caacgcttct ttaaacgcta cggctttggc ggcgatgacg tgcatcagtg gaccgccttg
      541 taggcttggg aagatggcgg agtttaacgc tttttcgtgg gtattgtcgc ggcacaaaat
      601 cacgccgccg cgagggccgc gtagggtttt gtgggtggtg gtggtcacga agtcgcagaa
      661 tggcacgggg ttgggatatt cgccaccggc aatcagtccg gcatagtgcg ccatgtcgac
      721 aaagaggtat gcgccgactt tatcggcgat ctcgcggaat tttgcccagt cgatttgcaa
      781 cgcgtaggca gacgcaccgg ccacaatcat tttaggtttg tgttcgagag ccaagcgttc
      841 cacttcggca taatcgagca cttcgttttc atccaaacca taagtaacgg cattgtagag
      901 tttgccggaa atattaacgc tcgcgccgtg ggtcaggtgg ccgccgtgcg ccaaagacat
      961 acccaaaatg gtgtcgcccg gttttaaaac ggaagcgtac acggcttggt tggcttgcga
     1021 gccggagtgc ggttgaacgt tggcgtattg cgcgccgaac agttttttga cgcggtcgat
     1081 tgccaattgt tcgacaatat cgacgtattc gcagccgccg tagtagcgtt tgccggggta
     1141 gccttcggcg tatttgttgg tcagctggga accttgcgct tccattacgg cgcagctgac
     1201 gtagttttca gaggcaatca gctcgacgtg gtcttgctgg cgttggtctt cttgggcaat
     1261 ggctgctgcc aaatcggggt catattgtgc gagggtaacg ctttttgaaa acatgttctc
     1321 ggctcctttg tgtaatcagg gtatcatgag tgttttttgt ataaaaaaat acttcaaaac
     1381 ctaaggcaga tagtccataa tgcgtaaatt ttctttggca ttatcaggta atttatttaa
     1441 catgctggtt tttagcgtct cattaccttt atgttagtac aaggctaccc aaaggcaata
     1501 catcaaatgg taaattttcg gcagtttgtg caaaatcaat caaataacca gcaccaacca
     1561 catctttatc agccataacc cgctgataca ccacttgcca agacaactct cctgccccac
     1621 catgtcttaa aatcagatga atggcttgta atgctgtgtt tggcgtctca caaattgcga
     1681 agatctgctc agaagcttgc ttgatggctt gtatttttgt ttgattactc acaatttccc
     1741 cctattttaa tattaactta atgcggtcaa attcacaaaa tacaagcttc acctctaatc
     1801 acccatcact cgaccttctc ggcgtggatc ggcaccacca accagcctgc ttggctcgat
     1861 aataatggct tgaacacctg aatttagctc acgcacgtca gtcttatagc ccaaatcatt
     1921 taatgcttgt tgccactgga gggcggttgt acccgtttct agttcatagt taccaaagcg
     1981 atttaataaa ttgggtgcac tgatggcatc ttggatatcc atattccagt cactatgtgc
     2041 cacaatcgtc ttagcgacat agccaatgat acggctacca cctggggagc cgattgccat
     2101 ataaggcttg cctgctttaa atacgatggt tggtgccatt gaggagcgtg gtctcttgcc
     2161 gggctcgaca cgattggcga cctgtttgcc ctgctttatt ggctcaaaac taaagtctgt
     2221 cagctcatta ttcagcaggt agccatttgc catcaaagtt gagccaaacg cattttcaat
     2281 ggaagtcgtc attgatagca cattgcccgc cttatccaca attgatatat gactggtaga
     2341 aggtaactca atcgcttgtg aggacaccca ctcatgaata aaatcgcctg cagatacgct
     2401 aggcaatgcc ttatccgact gctcaagcag ctggctgcga tgttttaggt agtctttaga
     2461 aatcaactgg cgaatgggta ctggtacaaa atcagggtcg cccaaatata catcacgatc
     2521 cgcaaacgca agcctagaag cgtcgcccaa gagacgtaaa ccttcagcat cataccccac
     2581 ctgattgggt gaaaattcat ttaaaatccc caaaatttga cccacagcaa tcccacctga
     2641 gcttggtgca cccataccgc atacttcata aatacgataa gtcacacaaa caggcgggcg
     2701 ttccaccact tgataatcag ataaatcttg taaggataat tgaccggggt tatccttagc
     2761 attttggaca actgaaacga tattttgggc atatttacca gtatgcagag cttttgcacc
     2821 ttgagctgct aacgcctgaa cactgtcagc aaattctaaa tttttcagca agctgcctgc
     2881 ttgtagcggc acaccattcg gcaaaaaata agcggctgtt tttggatagc gtgccaaatg
     2941 ctgctgattt tgctcaaccg agatggcaag ccttggcgac acctcaaagc cttgttttgc
     3001 caagcggatc ggtgtatcaa ataattttcc ccaaggcaat acaccgtatc gctgatgtat
     3061 tgtctccatc agtttaggga tagcaggcgt acccaccgag cgaccaccga ccaccgcttc
     3121 cataaatttc aatggttgac catctttatc caaaaataat tccggcgtcg cacgcatcgg
     3181 tgccgtctca cgcccatcaa atgtggtcaa tgttttggcg gtattatccc aatacaacac
     3241 aaatgcacca ccgcccaagc ctgacgactg tggctctacc aagcttagtg tcgtctgcac
     3301 cgccaccatc gcatctgcag cgctaccgcc ttgctttaag atatcatagc cagcttgtgt
     3361 tgctaatgga ttggctgacg ctaccataaa atcacttgca atcacctgct tttgttcgat
     3421 cagtcccgtt gcatgttcag gcgtgtgagc gtctgcacct gtgatgacag cagaatgagt
     3481 attaacctta ccttgattgg catggatgac ttgacatcca gagattgtca tagacattat
     3541 caatgcagtc aataaatatg ttttagccac aagcactcct tcgcctgagt ttgattgatg
     3601 attcatacaa ggcatgctga ttattgtatt taatatggct aaataattca atccaaacta
     3661 tcaatcttga ccatcaaaaa aagaccgcta atgtcatcag cagtcttttt tgatatttat
     3721 tttaagatat taagtaatca gacctttggg ctatgctctt caatgagtgg ttttagctca
     3781 cctgattggt acatttgtag gataatatca ctaccaccga ttaactcacc attaacccaa
     3841 agctgtggaa aggttggccg attggcgatg agtggtagag tactgcgaat ttctgggttt
     3901 tctaggatat taacaaaagc aaagggtctg ccaattgggt cagcacctct actgcacgcg
     3961 ctgaaaatcc acattgggga aactggggcg tgcctttcat
//
LOCUS       DAWKOX010000166         3990 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.166, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000166 DAWKOX010000000
VERSION     DAWKOX010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3990
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.166"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            123..2150
                     /gene="uvrB"
                     /locus_tag="WJK78_001777"
     CDS             123..2150
                     /gene="uvrB"
                     /locus_tag="WJK78_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ7598658.1"
                     /translation="MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIAQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVVTQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVMRDRIRNIKESLLFGAE"
     gene            2196..3464
                     /locus_tag="WJK78_001778"
     CDS             2196..3464
                     /locus_tag="WJK78_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT domain-containing protein"
                     /protein_id="HEZ7598659.1"
                     /translation="MKLSKTRIDKSGLALAKQQYKDEIDFIELEECFDLYRQSHLSPL
                     SKTTIDIQNILREYIGEYYIAQRLKRKPQIIRKLNRLSVRLTQLQDIGGCRIIVPTNR
                     DVDKIYKFLSSKKDNLDFLIKKVTDYREKGRDDSGYRALHIIIERENLNFELQIRSRI
                     QHYWAESIEKTSVVYGYYLKEQEGDRDVINYFKELSDVFYEIESGRKPTTIQKLNLED
                     LRKRCEVIIQKSDTHKILNSYVNEGIISALIEKEKRNTNSLNNWILIFDWNAGVFVSW
                     DVVAQDPKQAVEVYVNYENQYPSLEGFEVVLIGSSDIASVQKTHSHYFGIASYENILE
                     TLDESIFCFAKKDDIDIGARRILAAMVRHKFWGTKTVTSETLKNHFCQNLFGFDYSLR
                     DLIRKELIKYGRDKDLSLNIAKKMEIESYL"
     gene            3869..>3990
                     /locus_tag="WJK78_001779"
     CDS             3869..>3990
                     /locus_tag="WJK78_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7598660.1"
                     /translation="MKYRRFYRNGGTYFFTVATNKRQRILTDDAVRLALRQAVMA"
BASE COUNT         1241 a          945 c          855 g          949 t
ORIGIN      
        1 tgggtagcga ttgggtttca gacggcatac attcaggatt tcaccgcctt atgccgtctg
       61 aaagacgttt ccgacccatc cctactacac actttgtccg caaacgcatc acaggcaaga
      121 ttatggaagt tatccaatac ccaaattccc ccttcaaact ccaccaaccc ttcccgcccg
      181 caggcgacca gcccaccgcc attgcaggcc tgctcgaagg gctttcagac ggccttgcct
      241 atcaaaccct gctcggcgta accggttcgg gcaaaaccta caccatggcg aacgtcatcg
      301 cccaaagcgg ccgccccgcc atcatcatgg cgcacaacaa aacccttgcc gcccagcttt
      361 acgccgaaat gcgcgaattt ttccccgaaa acgcagtgga atatttcgtc tcctactacg
      421 actattacca gcccgaagcc tatgtgccca gccgcgactt gttcatcgaa aaagacagcg
      481 cgatcaatga acacatcgaa caaatgcgcc tttccgccac caaaaacctg atgacgcgcg
      541 acgacgtgat tatcgtcgcc accgtgtccg ccatttacgg tatcggcgac ccgaccgagt
      601 atcaacaaat ggtgttgtcc gtcaaagaag gcgataccat agcccagcgc gacatcatcg
      661 ccacgctcgt ttccatgcag tacgaacgcg gcgatttgga cttcaaacgc ggcagcttcc
      721 gcgtgcgcgg cgacgtgatt gacgtgtacc ccgccgaaag ctccgaaaac gccttgcgta
      781 tcagcctgtt cgacgacgaa atcgaccgcc tcgatatgtt cgacccgctt tcaggcagcc
      841 ttattcaacg cgtcggccgc tacaccgtct tcccgtccag ccactacgtt accccgcgcg
      901 acaccgtatt gcgcgcctgc gagtccatca aagaagaatt gcgcgaacgc atcgaatttt
      961 tcgcccgcga acaacgcccc gtcgagcaac aacgcatcga acaacgcacc cgcttcgacc
     1021 tcgaaatgct ctacgaaatg ggcttctgca aaggcatcga aaattattcc cgccacttct
     1081 ccggcaaaaa agaaggcgaa ccgccgccca cgctgatgga ctatctgccc gacaacgcca
     1141 tcatgttcat cgacgaaagc cacgttaccg ttacccaaat cggcggcatg tacaaaggcg
     1201 acgcatcgcg caaacaaaac ctcgtcgact acggcttccg cctgccttcc gcccgcgaca
     1261 accgcccgct caaattccac gaatttgaaa aagtcatgcc gcaaaccgtc ttcgtttccg
     1321 ctactcccgc caaatacgaa gaagaacacg ccggacaagt ggtcgaacaa gtcgtccgcc
     1381 ctacagggct ggtcgacccc caaatcatca tccgccccgt cgtcacccaa gtcgatgact
     1441 taatgagcga aatcaacgac cgcatccaaa aaggcgaacg cgttctcgtt accaccctca
     1501 ccaaacgcat ggcggagcaa ctcaccgact attacagcga actcggtatc aaagtgcgct
     1561 acctgcacag cgacatcgac accgtagagc gcgttgaaat tattagagat ttgcggcttg
     1621 gactgtttga cgtacttgtc ggcatcaacc tcttgcgcga aggcttggac atccccgaag
     1681 tctcccttgt cgccatcctc gacgccgaca aagaaggctt cctgcgctcg caccgcagcc
     1741 tgattcaaac cataggccgc gccgcgcgca acgtgaatgg cgttgcaatt ttgtatgccg
     1801 acaaaatcac cgactccatg aaagctgcca tcgacgaaac cgaacgccgc cgcgaaaaac
     1861 aaattaaatt caacgaagaa cacggcatcg tgccgcagca gattaaaaaa caggtcaaag
     1921 acatcatcga cggcgtgtac cacgaagaag acagcggcaa aggccgtaga caaggcaaaa
     1981 acaaagttaa agtcggggag attcataacg aagaagacgc gattaaagaa atcgccaaac
     2041 tggaaaaagc catgcagcag gcggctcggg atttgcagtt tgaggaagcg gcggttatgc
     2101 gtgatagaat acggaatatt aaggaaagcc tgttgtttgg ggcagagtaa tgaaatagtt
     2161 taatattctc agcttaatgt ataaaggata attttatgaa attgtcaaaa acaagaatag
     2221 ataaatctgg cttagcattg gctaaacaac aatataaaga tgaaattgat tttattgaat
     2281 tggaagaatg ttttgatttg tataggcaat cacatctttc accattatct aaaacaacta
     2341 ttgatattca aaatattctt agggaatata ttggtgagta ttatatagct cagcgactaa
     2401 aaagaaaacc acagataatc agaaagttaa ataggcttag cgttagacta actcagttgc
     2461 aagacattgg tggttgtaga attattgttc caacaaatag agatgttgat aagatatata
     2521 agtttttatc aagtaagaag gataatcttg attttttaat aaaaaaagta accgattacc
     2581 gtgaaaaagg tagagatgat tcagggtata gagctttaca tataattata gaaagagaaa
     2641 atcttaactt tgaattacaa attagaagta ggatacaaca ttattgggca gaaagtatag
     2701 agaaaacctc tgttgtttat ggatattact taaaagagca agaaggggat agagatgtaa
     2761 ttaactattt taaagaatta tcagatgttt tttatgaaat tgaatcaggg agaaaaccaa
     2821 ctactataca aaagttaaat cttgaagatt taagaaaaag atgtgaagtt attattcaga
     2881 aatcagatac tcataaaata ttaaatagct atgttaatga aggtataatt agtgcgttga
     2941 tagaaaagga aaagagaaat actaattcat tgaataactg gatactaatt tttgattgga
     3001 atgcaggggt tttcgttagt tgggatgttg tagctcaaga tccgaagcaa gccgttgagg
     3061 tatatgttaa ttatgagaat cagtatccat ctttagaggg gttcgaggtt gttttgatag
     3121 gatcatccga tatcgcttct gtacaaaaaa cacatagtca ttattttggc atagcctcat
     3181 atgaaaatat tctagaaaca cttgatgaat caattttttg ctttgctaaa aaagatgata
     3241 ttgatattgg ggcaagaaga atattggcag caatggtaag gcataaattt tggggaacaa
     3301 aaacagtaac atcagaaact ttaaaaaatc atttctgcca aaatcttttt ggatttgatt
     3361 attctttaag ggatttaata agaaaagaat taataaaata tggaagagat aaagatttat
     3421 cattgaatat agcaaagaaa atggaaatag aatcgtattt ataagcaagc gcagcttgta
     3481 tccccatcaa ccgtgtgcgt ggctacgcca cacaccttac ctgcgtatgg cacaaaaact
     3541 ttaaaaccga ggtgtagggt gtgtgcggta cgcacgcacg cgttctttgt agtgcaaacc
     3601 actgcttcaa actttcagac gacctcaaac gccgtctgag aatctatggc ataaaggccg
     3661 tctgaaaaaa tggtttcagt acaactgcca ctggttgtaa cttgattaaa accacccttt
     3721 cagacagcct gccgttttca gcaagcgtag gtcggatact cgtatccgac aaaaccttta
     3781 acattcccgt cgttgcaatc cgttgcagca atgcccgaaa tgtcggattc gagaattcga
     3841 cctatacaat cattccgagt ataatactat gaaataccgt cgtttttacc gcaatggcgg
     3901 cacttacttt tttacggttg caaccaataa acggcagagg attttgaccg atgatgcggt
     3961 gcgtttggct ttgcgacagg cggtaatggc
//
LOCUS       DAWKOX010000167         3931 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.167, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000167 DAWKOX010000000
VERSION     DAWKOX010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3931
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.167"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..332)
                     /locus_tag="WJK78_001780"
     CDS             complement(<1..332)
                     /locus_tag="WJK78_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ7598661.1"
                     /translation="MFSLYREDSLISRLNRDGYLTSPSADFLELLSLCRDIHALTDGA
                     FDPTVQALWKLYADYFAARPDAETPPPQNSVKEALKRVGFGKVSFDDREIRFAEKGMG
                     LSLNGIAQG"
     gene            complement(313..594)
                     /locus_tag="WJK78_001781"
     CDS             complement(313..594)
                     /locus_tag="WJK78_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nosX protein required for nitrous oxide
                     reduction"
                     /protein_id="HEZ7598662.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADDEKRNKDEKRN
                     ENVFFWKGVALGSGAELRLFGVDDRQAADLVNKVLAEVARLEKIVQPLP"
     gene            complement(603..1397)
                     /locus_tag="WJK78_001782"
     CDS             complement(603..1397)
                     /locus_tag="WJK78_001782"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ7598663.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIYELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFSFKFEDFELEGYDPHPHIKAAVSV"
     gene            1781..3115
                     /gene="gdhA"
                     /locus_tag="WJK78_001783"
     CDS             1781..3115
                     /gene="gdhA"
                     /locus_tag="WJK78_001783"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ7598664.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3257..3631
                     /locus_tag="WJK78_001784"
     CDS             3257..3631
                     /locus_tag="WJK78_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598665.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3675..>3931
                     /locus_tag="WJK78_001785"
     CDS             3675..>3931
                     /locus_tag="WJK78_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEZ7598666.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQQ"
BASE COUNT         1070 a         1015 c          925 g          921 t
ORIGIN      
        1 ccttgcgcga tgccgttcaa ggacaaaccc ataccctttt cggcaaaacg gatttcacgg
       61 tcgtcaaacg agactttgcc gaagccgacc cgtttcaggg cttccttcac gctgttttga
      121 ggaggcggcg tttccgcatc gggacgggcg gcaaaataat cggcatacag tttccacaac
      181 gcctgcactg tcggatcgaa cgcgccgtcc gtcagcgcgt gaatatcgcg gcacaggctc
      241 aacagttcca aaaaatccgc cgacggcgaa gtcagataac cgtccctgtt caggcggctg
      301 atcaggctgt cttcacggta aaggctgaac aattttttcc aaacgcgcca cttccgccaa
      361 aaccttgttg accaaatccg ccgcctgtct gtcgtccaca ccgaacaggc gcagctccgc
      421 accggaaccc agcgcgacac ctttccagaa gaacacattt tcattgcgtt tttcatcttt
      481 attgcgtttt tcatcatcgg cggcaaaagg attcggcagg aaagaaaccg ccgcgcccgc
      541 cgccgcaacg gcggcaactg tcaaaaaacg cctgcgcccg aaatgcctgc ccataccgcc
      601 tcctaaaccg acactgccgc cttgatgtgc ggatgggggt cgtaaccttc caactcgaaa
      661 tcttcaaact tgaaggaaaa caaatctttg acttcaggat tgattttcat cactggcaag
      721 gcgcgcggtt cgcgttccaa ctgcaatgcg gcctgctcga aatggttgcg gtacaaatgc
      781 gcgtcgccaa acgtatggac aaactcgccc gcctccaatc cgcacacttg cgccatcatc
      841 atggtcaaca atgcgtagct ggcaatatta aacggcacac caaggaaaat atctgcacta
      901 cgctggtaaa gctggcagga cagtttgccg tcggcaacgt aaaactgaaa cagcgcgtgg
      961 cagggcggca aggccatttc gtcgaccaaa gccggattcc acgccgatac aatcaggcgg
     1021 cgcgagtcgg ggtttttctt aatttgttcc accacattgg cgatttggtc gatatgcctg
     1081 ccgtcgggcg cgggccagtt acgccactgg tagccgtaaa ccgggcctaa gtcgccgttt
     1141 tcgtccgccc actcgtccca aatggaaaca ttgttgtcct ttaggtattt gatattggta
     1201 tcgcctttga gaaaccaaag cagctcgtag ataatcgaac gcagatgcag ctttttggtc
     1261 gtcagcagcg gaaaaccttt gcccaagtca aaacgcatct gataaccgaa tacggagcgc
     1321 gtgcccgtac cggtgcggtc tgatttgtcc gtaccgttgt cgaggacgtg gcgcatcaag
     1381 tccaaatagg ctttcatagc agtctttcat caaattaaac ggcgcatatt gtaacatttc
     1441 cggataatgc ccaaaacacg gatacagaca ggcaggattg ttggcaattt cagtcctttt
     1501 ccacagtaaa acccggtggg aaaacaaaat taccttgatt ggaatcaaaa aatctagttt
     1561 aattacttag aataaaattt caataatatt tttatttacg aaattaattt atgattattg
     1621 attaattatc ggcaacaaac atcaaacatc gaaaacatgg aaaaaataat gtcaacaatt
     1681 tttgccaaat cgggcttggc atcagaaaaa aataggttta tattcccacc tacaaatttg
     1741 ttttcccatt agtacactat caaccaaaag gagtatccga atgactgacc tgaacaccct
     1801 gtttgccaac ctcaaacaac gcaatcccaa tcaggagccg ttccatcagg cggttgaaga
     1861 agtcttcatg agtctcgatc cgtttttggc aaaaaatccg aaatacaccc agcaaagcct
     1921 gctggaacgc atcgtcgaac ccgaacgcgt cgtcatgttc cgcgtaacct ggcaggacga
     1981 taaagggcaa gtccaagtca accggggcta ccgcgtgcaa atgagttccg ccatcggtcc
     2041 ttacaaaggc ggcctgcgct tccatccgac cgtcgatttg ggcgtattga aattcctcgc
     2101 ttttgaacaa gtgttcaaaa acgccttgac caccctgcct atgggcggcg gcaaaggcgg
     2161 ttccgacttc gaccccaaag gcaaatccga tgccgaagta atgcgcttct gccaagcctt
     2221 tatgaccgaa ctctaccgcc acatcggcgc ggacaccgac gttccggccg gcgacatcgg
     2281 cgtaggcgga cgcgaaatcg gctatctgtt cggacaatac aaaaaaatcc gcaacgagtt
     2341 ttcttccgtc ctgaccggca aaggtttgga atggggcggc agcctcatcc gtcccgaagc
     2401 gaccggctac ggctgcgtct atttcgccca agcgatgctg caaacccgca acgatagttt
     2461 tgaaggcaaa cgcgtcctga tttccggttc cggcaacgtg gcgcaatacg ccgccgaaaa
     2521 agccatccaa ctgggcgcga aagtgctgac cgtttccgac tccaacggct tcgtcctctt
     2581 ccccgacagc ggtatgaccg aagcgcaact cgccgccttg atcgaattga aagaagtccg
     2641 ccgcgaacgc gttgccacct acgccaaaga gcaaggtctg caatactttg aaaaccaaaa
     2701 accgtggggc gtcgccgccg aaatcgccct gccctgcgcg acccagaacg aattggacga
     2761 agaagccgcc aaaaccctgt tggcaaacgg ctgctacgtc gttgccgaag gtgcgaatat
     2821 gccgtcgact ttgggcgcgg tcgagcaatt tatcaaagcc ggcatcctct acgccccggg
     2881 aaaagcctcc aatgccggcg gcgtagcaac ttcaggtttg gaaatgagcc aaaacgccat
     2941 ccgcctgtct tggactcgtg aagaagtcga ccaacgcctg ttcggcatca tgcaaagcat
     3001 ccacgaatcc tgtctgaaat acggcaaagt cggcgacaca gtaaactacg tcaatggtgc
     3061 gaacattgcc ggtttcgtca aagttgccga tgcgatgctg gcgcaaggct tctaagcaaa
     3121 cgccgccgct ccgcaaacaa aatgccgtcc gaaccgcaaa tgctgttcag acggcatttc
     3181 attatccgcc cgttcgaatc gggtgatact atttgtatcc agaattgttg gatagtttgg
     3241 gagtggagag gaagaaatga ttatggacca atactatatg gagttaaaga ataagttatc
     3301 taacagacca atcctactgg ataatactaa tgattttctt tttgttttag taaatacagt
     3361 gaaagctatg atagaaaata ctgataaaag tcagctttca gagttagata aaattttaga
     3421 cggtgtcaca agtcaagaat tgaaacttgc ctatgatttt tgtcaaggga aattcggtca
     3481 agcaggtttt tcttatcgta ggcacccgaa ttatttttat ttgtccagtt taattgcgac
     3541 ttttccagaa tttgagttgt ctaaagcaga ccgagattac ctcaaaggaa tcataaattt
     3601 tgataactac cttttatatg agttagatta gtctttaatc acctcaaaac cctatttatt
     3661 caaaaggaga aaaaatgatt gagctgaaat tagtagatga gagcagtttt caggcagtgc
     3721 tggatttgaa aatatctgaa gctgatgaac gagcacgttt tgtggctcca aatgtacgct
     3781 ctttagctga cgcatggctc taccgggaaa atgaagatgt gtttccgagg gcaatctatt
     3841 gggataagca agtggttggc tttctcctgc tggaaataga caaggatgaa gcagaatact
     3901 ttatctggcg gataatgatt ggtcagcagt g
//
LOCUS       DAWKOX010000168         3918 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.168, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000168 DAWKOX010000000
VERSION     DAWKOX010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3918
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.168"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            126..2711
                     /gene="acnB"
                     /locus_tag="WJK78_001786"
     CDS             126..2711
                     /gene="acnB"
                     /locus_tag="WJK78_001786"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ7598667.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASLLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            2853..3848
                     /locus_tag="WJK78_001787"
     CDS             2853..3848
                     /locus_tag="WJK78_001787"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ7598668.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDG
                     IEYRGFAQETVEELTKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTSFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPAGIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         1007 a         1134 c          991 g          786 t
ORIGIN      
        1 tacctgtcat aacagttcca tttttgttaa aactagtcta tgatagcggt acaaatattg
       61 tttacaatat ttaacgcaaa tcatttgcaa cccgacaaaa gaaaaacaga aaaaggaaca
      121 aagagatgtt agaagcctat cgtaaagccg ccgccgagcg cgccgccctc ggcattcccg
      181 ccctcccttt gaacgcgcag caaaccgccg atttggttga gctgctgaaa agcccgcccg
      241 caggcgaagg cgagttcttg gtcgaactgc ttgcccaccg tgttccgccc ggtgtggacg
      301 atgccgccaa agtcaaagcc tcactcctgg ctgccgttgc cgaaggcagc gcgtccagcc
      361 cgctgatctc ccccgaatat gcgaccgaac tcttaggtac gatgctcggc ggttacaata
      421 tccacgcctt aatcgaactc ttggacgacg acaaactcgc gcccattgcc gccaaaggct
      481 tgaaacatac gcttctgatg ttcgattcct tccacgacgt tcaggaaaaa gccgaaaaag
      541 gcaacaaata cgcgcaagaa gttttgcaat cttgggcaga tgccgaatgg ttcgcctcac
      601 gcgccaaagt tcccgaaaaa atcaccgtta ccgttttcaa agttgacggc gaaaccaata
      661 cagacgacct ctcccccgcg cccgacgcgt ggagtcgtcc cgatattccg ctgcacgcgc
      721 tggccatgct gaaaaacccg cgcgacggca tcacacccga caaaccgggc gaagtcggtc
      781 cgattaaatt gttggaagaa ctcaaagcca aaggccatcc ggttgcttac gtcggcgacg
      841 tggtcggtac tggttcttca cgcaaatccg cgaccaactc cgtcatttgg cataccggcg
      901 aagacattcc gttcgtgccg aacaaacgct tcggcggcgt atgtttgggc ggcaaaatcg
      961 cgccgatttt cttcaatacc caagaagatt ccggcgcgct gccgattgaa gtcgatgtat
     1021 ctgctctaaa aatgggtgat gtcgtcgata tcctgcctta tgaaggcaaa atcgtgaaaa
     1081 acggcgagac tgttgccgag tttgaattga aatcacaagt attgctggac gaagtgcaag
     1141 ccggcggccg tatcaacctg attatcggcc gaggtctgac cgccaaagcg cgcgaagccc
     1201 tgaaactgcc tgcctctact gcattccgcc tgccgcaagc gcctgccgaa agcaaagccg
     1261 gtttcacctt ggcgcaaaaa atggtcggcc gcgcctgcgg tctgcccgaa ggacaaggcg
     1321 tgcgtccggg tacttactgc gaaccgcgta tgacgacggt cggctcgcaa gacacgaccg
     1381 gcccgatgac ccgcgacgag ttgaaagact tggcttgttt gggcttctcc gccgatatgg
     1441 tgatgcagtc tttctgccac accgccgcct atccgaaacc tgtcgatgta aaaacccata
     1501 aagaactgcc cgcctttatt tccacccgtg gcggcgtgtc actgcgtccg ggcgacggcg
     1561 tcatccactc gtggctcaac cgcctgctgc tgcccgatac cgtcggcacc ggcggcgaca
     1621 gccacacccg tttccccatc ggtatttcct tccccgccgg ctccggcttg gttgcctttg
     1681 ccgccgcaac gggcgtaatg ccgctcgata tgcccgagtc tgtattggta cgcttcagcg
     1741 gcaaactgca accgggtgta accctgcgcg atttggtgaa cgccattccg ctgtacgcaa
     1801 tcaaacaagg tttgctgacc gttgccaaag ccggtaagaa aaacatcttc tccggccgca
     1861 tcctcgaaat cgaaggcctg cctgatttga aagtggaaca agcctttgaa ttgaccgacg
     1921 catccgccga acgctccgcc gccggctgta ccgtgaagct caataaagag ccgattatcg
     1981 agtacatgaa atccaacgtc gtgttgatga aaaacatgat tgccaacggc tatcaagatc
     2041 cgcgcacttt ggaacgccgc atcaaagcta tggaaaaatg gctggcaaat cccgagttgc
     2101 tcgaagcgga taaagatgcc gaatacgccg ccgtgattga aatcaacatg gacgacatca
     2161 aagagccgat tatcgcctgc ccgaacgacc cggacgacgt gtgcttcatg tccgaacgct
     2221 ccggcaccaa aatcgacgaa gtattcatcg gttcgtgtat gaccaacatc ggccacttcc
     2281 gcgccgcctc caaacttttg gaaggcaagg cagacacccc cgtccgcctg tggattgcgc
     2341 cgccgaccaa aatggacgcg aaacaattgt ccgacgaagg acactacggc gtactcggac
     2401 gtgccggcgc gcgtatggaa atgccgggtt gctccttatg tatgggtaat caggcgcaag
     2461 tacgcgaagg tgcgaccgtt atgtccacct ccacccgcaa cttcccgaac cgtttgggta
     2521 aaaacacctt tgtttacctc ggttcggcgg aattggcagc gatttgctcc aaactgggta
     2581 aaatcccgac cgttgaagaa tatcaagcca atatcggcat catcaacgaa cagggcgata
     2641 aaatctaccg ctatatgaac ttcaacgaaa tcgacagcta caacgaagta gccgagaccg
     2701 tgaacgttta atccccgtca tccgtatgaa gtaagggatt gaccgcaatg ccgtctgaac
     2761 aaccttcaga cggcattgca acattccgct aacccttctt tccgcaaacg ctgcaaatac
     2821 ggcgttcacg cccccacata aaggaaacaa cagtgaacct gaaaaaccgc cattttctga
     2881 aacttttaga cttcacgcca gaagaaatca ccgcctacct cgaccttgcc gccgaattga
     2941 aagccgccaa aaaagcaggg cgcgagattc agcggatgaa agggaaaaac atcgccctga
     3001 tttttgaaaa aacctctact cggacgcgct gcgcgtttga agtcgccgcg cgcgatcaag
     3061 gcgcgggagt gacttattta gagccgtccg ccagccaaat cgggcataag gaaagcatca
     3121 aagacaccgc ccgcgtgttg ggcaggatgt acgacggcat cgaatatcgc ggcttcgctc
     3181 aggaaactgt cgaagaattg acgaaatacg cgggcgtacc cgtgttcaac gggctgacca
     3241 acgagttcca tcccacacaa atgcttgccg acgcactgac tatgcgcgaa cacagcggca
     3301 aacctttgaa ccaaacctcg tttgcctacg tcggcgacgc gcgttacaac atgggcaatt
     3361 ccctgctgat tttaggggca aaattgggga tggacgtgcg tatcggcgca ccgcaaagcc
     3421 tgtggccgtc tgaaggcatt atcgccgccg cacacgccgc cgccaaagaa accggtgcaa
     3481 aaattaccct gaccgaaaac gcgcatgaag ccgtgaagaa tgttgatttt attcataccg
     3541 atgtgtgggt cagcatgggc gagccgaaag aagtctggca ggaacgcatc gatttgctga
     3601 aagattaccg cgttacgccc gaactgatgg cggcatcggg caatccacag gtcaaattca
     3661 tgcactgcct gcccgccttc cacaaccgtg aaaccaaagt cggcgaatgg atttatgaaa
     3721 ccttcggctt aaacggcgtg gaagtaacgg aagaagtatt tgaaagcccg gccggcatcg
     3781 tgttcgacca agcagaaaac cggatgcaca cgattaaagc ggtgatggtt gcggctttgg
     3841 gcgactgaca gaactgtgcc tgtttaaatt catccgcaac acagataccg tctgaacacg
     3901 atgttcagac ggtatcca
//
LOCUS       DAWKOX010000169         3886 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.169, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000169 DAWKOX010000000
VERSION     DAWKOX010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3886
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.169"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            98..1128
                     /locus_tag="WJK78_001788"
                     /pseudo
     CDS             98..1128
                     /locus_tag="WJK78_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246474.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            1156..3582
                     /gene="hupB"
                     /locus_tag="WJK78_001789"
     CDS             1156..3582
                     /gene="hupB"
                     /locus_tag="WJK78_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HEZ7598669.1"
                     /translation="MSIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVKIENKGYVFSPTQSFSKYQTYVATGVARSQPDPQEWVNKSTLFKLGY
                     NFNDRNRIGWIFEDSRTDRFTNELSNLWTGTIYSPATGDYRHRQDVSYRRRSGVEYKN
                     ELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINSEVYHSFRHIRQNTAQWTAD
                     FEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFVKLYDPKIFTSNQAKITMLIESRSK
                     YKFAYWNNAFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHAG
                     FSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAETAKNF
                     ELGLAGSGKAGNFKFSGFQTRYRNFIELTYMGVSSDKPNSPNYAPISDGTALVSSPVW
                     QNQNRSSAWVKGLEFNGTWNLDSIGLPQGTHAGVNVSYIKGKAKQTNGQETPINALSP
                     WSAVYNLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDL
                     SAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGR
                     SYNFTIEAKF"
BASE COUNT         1058 a         1210 c          878 g          740 t
ORIGIN      
        1 cgatttttgc accgacccac aaaaccagtt gacatcatat aacatttaaa ctgataatca
       61 aaactattat taacacatca tcaagattga gtatgcgatg aaatacaaag ccctgtcctt
      121 actgccgctt gtcgctgccc ttgccgcctg tgccgggggg ggggggtagc cgaaccgcac
      181 gtccccgtgt ccatccccac cgccacgccg ctgcccaaag gcgaggtaac gttatcaagc
      241 gataacggca aaatcgaaaa catcaacacc accagcaccg gaagcacatc cgtcatttcc
      301 attcaagagc gggcggttac aaaaaactat ttcggtgttg aatcacaaga aaaatcattc
      361 atcttcaaaa cacccggcgg cgcgcaatac accctttcat cctacgccga ccccatcgtc
      421 cccagctact cctcccccga tttcaaaatt cccgaccgcc acgcagggca gcggcttgca
      481 gacggcagcc gcatctttat ctgctgcagc gactccgggg caaccagaga agcggaaatt
      541 accaaacaag attatatgaa attcggggca tggataggtc ccaacggcga aatcgacctc
      601 ttcgccggcg gcttccccgt cggcaaaaca ccgacatcaa gcagttatta cggcagcagc
      661 acgcccgaaa cccaaggcaa aggcaaaatc acttatcagg tttggggcat ccgcgtcaaa
      721 gacgggcaat ttgttacctc ctcttatacg ccgcccaaag gcagctcttt taccggctac
      781 accaacaccc ccgtcctttc ctttatcacc gccaatttca acagcaacaa actggcaggc
      841 gaaatccgcg gcaacagcga ttacggaccg agtgtgaaaa ttgaaaacgc aacgatcagc
      901 ggtccgagct tttccggcaa tgccacctcc ggcggcaaaa ccggcaactt ggaaggcaag
      961 ttttttggaa aattcaacgg cagctacggc aacactgaaa ccagcatagg cggcaaaatc
     1021 acttttaaag acgaccgctc cctcgatacc gtattcggcg gtgtgagtta tgtaaaaaaa
     1081 cttgatgaaa ccgccaatcg agataccgaa caccttacta aacaataaac catctcatcc
     1141 ctacaaaggt ttcttatgtc catccccttc aaacccgtat tggctgccgc cgccatcgcc
     1201 caagcgtttc ccgcctttgc ggcagacccc gcgccgcagt ccgcccaaac gctgaacgaa
     1261 atcaccgtta ccggcacgca caaaacccaa aaactcggcg aagaaaaaat ccgccgcaaa
     1321 accttagaca agctcttggt caacgacgaa cacgacctgg tgcgctacga ccccggcatt
     1381 tccgtcgtcg aaggcggcag ggcgggttct aacggcttta ccatacgcgg cgtggacaaa
     1441 gaccgcgtcg ccatcaacgt tgacgggctg gcgcaggcgg aaagccgctc ttccgaagcc
     1501 ttccaagaat tgttcggcgc gtacggcaac ttcaacgcca accgcaacac ttccgagccg
     1561 gaaaactttt ccgaagtaac catcaccaaa ggcgcggact cgctcaaatc cggcagcggc
     1621 gcattgggcg gcgcagtcaa ttaccaaacc aaatccgcaa gcgattatgt ttccgaagac
     1681 aagccctacc atttggggat aaagggcggc agcgtcggca aaaacagcca aaagttcagc
     1741 agcatcaccg ccgccggcag gctctttggt ttggatgcct tattggttta tacccgccgc
     1801 ttcggcaaag aaaccaaaaa ccgctcgacc gagggcgatg tcaaaattga aaacaaggga
     1861 tatgttttca gcccaaccca atcattcagc aagtaccaga cctacgtagc cacaggggtt
     1921 gcgcgctccc aacccgaccc gcaagaatgg gtaaacaaaa gcaccttgtt caagctgggc
     1981 tacaatttca acgaccgcaa ccgcatcggc tggatttttg aagactcccg caccgaccgt
     2041 tttaccaacg agctgtctaa tttgtggacg ggtacaattt actctcccgc aacgggcgac
     2101 taccgccacc gccaagacgt gagctaccgc cgccgctccg gcgtcgaata caaaaacgaa
     2161 ttggaacacg gcccgtggga cagcctcaag ctgcgctacg acaagcagcg catcgatatg
     2221 aacacttgga cttgggacat cccgaaaaat tacgatttgc gcggcatcaa cagtgaagtt
     2281 taccattcgt tccggcatat ccgccaaaac accgcgcaat ggactgccga ttttgaaaaa
     2341 caactcgact tttccaaagc cgtttgggcg gcgcaatacg gcttgggcgg cggcagaggg
     2401 gacaatgcca actcggatta cagctatttc gtaaaactgt acgaccccaa aatcttcact
     2461 tccaaccaag ccaaaatcac gatgctgatc gaaagccggt cgaaatataa atttgcctat
     2521 tggaacaatg cgtttcactt gggcggcaac gaccgcttcc gcctgaatgc gggcatacgc
     2581 tacgacaaaa acagcagcag cgcgaaagac gatccgaaat acaccaccgc catccggggg
     2641 cagattcccc atttgggttc ggaacgcgcg cacgcgggct tcagctacgg cacggggttc
     2701 gactggcggt ttaccaagca tctgcacttg ttggcaaaat acagcaccgg cttccgcgca
     2761 ccgacttcgg acgaaacctg gctattgttc ccgcatcctg acttttacct taaagcaaac
     2821 cccaacctga aggcagaaac cgccaaaaac ttcgagctgg gacttgccgg cagcggcaaa
     2881 gcaggaaact ttaaattctc cggtttccaa acccgctacc gtaattttat cgaactgacc
     2941 tacatgggcg tatcctcaga caagcctaac agccctaatt atgcgccgat ttccgacggt
     3001 actgcattgg tcagctcgcc cgtttggcaa aaccaaaacc gctcctcggc atgggtgaaa
     3061 ggtttggaat ttaacggcac atggaacctc gacagcatcg gtttgccgca aggcacgcac
     3121 gcaggtgtca atgtcagcta catcaaaggc aaggccaaac aaaccaacgg acaggaaacc
     3181 cctattaacg ccctttcgcc atggagtgcg gtttacaatc tgggctacga cgctccttcc
     3241 aaacgttggg gcatcaacgc ctacgccacg cgcaccgccg ccaaaaagcc gtccgacacc
     3301 gtccacagca acgacgactt gaacaacccg tggccttatg ccaaacacag caaggcctat
     3361 acgctgttcg acctttccgc ctacctcaac atcggcaaac aggttacgct ccgcgccgcc
     3421 gcgtacaaca ttaccaacaa gcagtactac acttgggaat ctttacgcag catccgcgag
     3481 ttcggcacgg tcaaccgcgt tgacaacaaa acccacgccg gcatccaacg ctttacctcg
     3541 ccgggcagga gctacaattt caccatcgaa gcgaagttct aagctcctga tgtgccaatg
     3601 ccgtctgaaa cccgatgatt tgggtttcag acggcatttt ttacggtcgc accgccgccc
     3661 cctttcaggc ttgtaccaag cccaatcccg caactctccg tcattcccgc aactctccgt
     3721 cattcccgca actctccgtc attcccgcga ctctccgtca ttcccacgga agtgggaatc
     3781 tagaaacgca aagctgcaag aatttatcgg aaatgactga aactcaacga acctggattc
     3841 ccgcctgcgc gggaatgacg aagctatccg cacagaaacc tgcacc
//
LOCUS       DAWKOX010000170         3873 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.170, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000170 DAWKOX010000000
VERSION     DAWKOX010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3873
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.170"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(1161..1598)
                     /gene="rnhA"
                     /locus_tag="WJK78_001790"
     CDS             complement(1161..1598)
                     /gene="rnhA"
                     /locus_tag="WJK78_001790"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ7598670.1"
                     /translation="MDQTVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            1712..2581
                     /gene="tehB"
                     /locus_tag="WJK78_001791"
     CDS             1712..2581
                     /gene="tehB"
                     /locus_tag="WJK78_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEZ7598671.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKAENLPEILLSGYSSEGGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKLKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAARDTVPAGRALDMGCGQGRNALFLGLKGFEVTAVDHNPAALANV
                     AELAEAESLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPEVIADMQAHTAVG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVKYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPE"
     gene            complement(2631..3437)
                     /gene="thiD"
                     /locus_tag="WJK78_001792"
     CDS             complement(2631..3437)
                     /gene="thiD"
                     /locus_tag="WJK78_001792"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ7598672.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETIFAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
BASE COUNT          823 a          963 c         1097 g          990 t
ORIGIN      
        1 tttaatttgt ctgtccgcat tgccgctaat tgtaccactt catcgtattt ccttttcggt
       61 tgaaaccccg ccactcggac atctgtcctt cggggcggca ggatcagact ttatttggga
      121 gggggtgtaa ccccttccaa atcaggacga cacataggga ggtgctttat gtgtcgtcct
      181 gtgtgttgaa atatatcgga cgcgtttgaa cagttgtgcg gcaaactgtt ttagcggcag
      241 gcaagagatg ccgtctgatg ccgtctgaag cccattgtcc gtcattccca cacaggcagt
      301 tgctacggtt gctgaagccc cttagccgtc gcgcaggcgg ttgctacggt tactaaaatc
      361 ccgtcattcc cgcgcaggcg ggaatccagt ccgttcggtt tcagttgttt ctgataaatc
      421 ttgcagcgtt gggtttttag attcccgctt tcgcgggaat gacggggcgg tcggatgccg
      481 cctgaaactc cgtcattctt gcaacttttc gtcattcccg tgaaaacggg aatctagaac
      541 ttcaaacttt cagataatct ttgaatattg ccgttgcccg acggtctaga ttcccgcttg
      601 cgcgggaatg acggtagagc ggtttcagtt gctcccgata aatgccgcaa tctcaaatcc
      661 cgtcattccc tcaaaaacag aaaaacaaaa tcagaaacct aaaatcccgt cattcccgca
      721 gctcttcgtc attcccgtga aagcgggaat ctagaccttt taaattttca cacggctttt
      781 gaatattgcc gttacccgaa ggtctggatt cccgcctgca cgggaatgac ggcagagcgg
      841 tttcagttgt ttctaaataa atttttgcag cgttggattt ttagattccc gctttcgcgg
      901 gaatgacggg gcggtcggat gccgcctgaa gcccgacaaa gcccccaatg ccgtctgaaa
      961 cctcgtcatt cctctgctgt ccgcaacttt tcgtcattcc cgcaaaagcg ggaatctaga
     1021 gcctctaaat tttcagacgg cttttgaata ttgccgttgc ccgacggttt ggattcccgc
     1081 ctgcgcggga atgacggtgg aggacgatgc cgtctaaagc ccattagcgg tttcagacgg
     1141 catttttgcc ggagcggcag tcaggaaaac tgcgctgcgc cacggtttgc caaatcgtcg
     1201 gcgcgttcgt tttccgcgtg tcccgcgtgt cctttaaccc aagtccagct gacttggtgc
     1261 tgcccaacca gaacgtcgag ttctttccac aagtcgtcgt ttttgacggg ctgtttggcg
     1321 gcggttttcc agccgttgcg cttccaaccg tgtatccagt tttccatgcc gtttttgacg
     1381 tattgcgagt cggtgcagat gatgacggtg cagcggcgtt tgagcgattt cagtccttcg
     1441 atgacggcgg tcagctccat gcggttgttg gtggtttgcg cttcgccgcc gaaaagttct
     1501 ttttcgtggc tgccgtagcg catcaacacg ccccagccgc ccgcgccggg attgcctttg
     1561 cacgcgccgt cggtgtaaag gtaaacggtt tggtccatta ttgtgccttt gtgtggtgtc
     1621 cggcgtgatt ataagcggtt tgtgcgccgt gccgtctgaa agattgcggc ggattaaaat
     1681 aggcatataa tgtgcaactt tatttttgaa tatgaaggag cggatagtgg gtcaaagcgg
     1741 cgagttgttt tgtttcggac aaatgcccgt atggaaggcg gaaaacctgc cggaaatttt
     1801 gttgtcgggt tattcgtccg aaggagggga atgggtctgc ctgaatgtgt tgcagggcga
     1861 tgtcgaagtc cgcacgcagg acggggcggc agaggtttgg tcggcggaaa gcggcgattg
     1921 cgtgtttgcg ccgcagcagg tgttttcggt caaactgaaa acggacgatg ccgaaatccg
     1981 tttgtcgctg tattgcgcgg cggcagacta ttttcacaaa aaatacggga tgagtgccac
     2041 gcattctgcg gtcgcggcgg cacgggatac cgtaccggcg ggcagggcgt tggatatggg
     2101 ctgcggacag gggcgcaacg cgctgtttct cggtttgaag gggtttgaag ttactgcagt
     2161 cgatcacaat cccgccgcct tggcaaacgt ggcggagctg gcagaggcgg agagtttgaa
     2221 cgtccgcacg ctggaatatg atttgaacgc cgccgccttg cagggcgagt ttgattatat
     2281 tgtggcaacg gtggtgctga tgttcctgat gccgcagcgc gtgcctgaag tgattgccga
     2341 tatgcaggcg catacggcgg tgggcgggta caacttaatc gtatcggcaa tggatacggc
     2401 ggatttcccc tgtccgatgc cgttcccctt caaatttaaa gagggagagc tgaaggatta
     2461 ttatcgggat tgggagctgg tcaaatataa agaagaattg ggcgcgatgc acgccaaaga
     2521 cgaaaacggc aatccgatac ggtttaaatt tgtaacgatg ctggcgaaaa agcctgaata
     2581 atcctcaaaa atgccgtctg aacattttgt ttcagacggc atttttacgt ctagtcccga
     2641 tacgcccaat gattgaccgg cccgtgtcct gcgccgattt ccaaagggtt tgagattgcc
     2701 gccgtgatgt atgccttggc agtctgtacg gctttgcaaa cgtctaagcc ttttgccaac
     2761 tcggcggtaa tgcaggcaga aaacgtgcag cccgtgccgt gcgtgtgggc ggttggaaag
     2821 cgcgggctgt ccaattccag cgtttcattt tgcgtaaaca gccaatccgt gcagcgtccg
     2881 cttgtgctgc cgttcaaatg tccgcctttg ataacgacat ttttgacacc gtaatcaagc
     2941 aggatttttg ccgcacgttc cgcatcttta cggttttcga tatgcacgcc ggtcagggct
     3001 tccgcctcgg gcaggttggg ggtcaataca tccgtatcgg gaagcagcag gcgcgtcagt
     3061 gccgcaacgg cggaatcctg caacagcggc gcaccgcctt tggcaatcat cacggggtcg
     3121 agtacgcgcc tgccgaagtc gcagtgtttc agtttgtcgg caacgcattc gatgatttcc
     3181 gccgtgccga gcattcctat tttgtaggcg cggatgtcaa agtcttccct gattgcttgg
     3241 atttgtgcga agatggtttc ggtcgggacg agatgaaccg ccgacacgcc caaggtattt
     3301 tgcgcggtaa cggcggtgat gacgcacgtt ccgaacacgc cgcgcatctg aaacgttttc
     3361 aaatccgcct gaatgcccgc accgccgccc gaatccgaac cggcgatggt aagcgtttgc
     3421 acaaaagagc ttttcatttg ttcctcctta atattgtgtc cgataaaaag ggctaatgcc
     3481 tgtaaaaaag cacggcgatg ccgtctgaaa accgcagcgc ggggtttgtg gtgcattata
     3541 tgccgtattg caggacaagg cacagggcag ggcggcgggg tgcatcgtag caactgtatt
     3601 tttgcccgac ggggtgaaaa atacagttgc tacacccact gataatgaaa aaagagagca
     3661 atgccgtctg aaccgcgtgt tgcggcgagc ataaaccggc acgctttatt cgtcattccc
     3721 acaaaaacag aaacctaaaa ttccgtcatt cctacgaaag cgggaatcca gtgtgttcgg
     3781 tttcagttgt ttttgggttt cgggtgattt ccaaatcatc attcccgcgc aggcgggaat
     3841 ctagcccttg gggcagcggc aatatttata aag
//
LOCUS       DAWKOX010000171         3859 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.171, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000171 DAWKOX010000000
VERSION     DAWKOX010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.171"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="WJK78_001793"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="WJK78_001793"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ7598673.1"
                     /translation="MKEFDFIKRYLQTGTDNDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLKRFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGIAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDDGGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="WJK78_001794"
     CDS             1439..1924
                     /locus_tag="WJK78_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ7598674.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="WJK78_001795"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="WJK78_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ7598675.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLSGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTR"
BASE COUNT          789 a          948 c         1073 g         1049 t
ORIGIN      
        1 gaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cctcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcactgtatg ccggatatgg ttttatcatc agcccttttc ggttgaaacc
      241 tcgccagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggt
      301 ggcgtgcagt gcggtgcttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggccaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataat
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgcaga tgtcaaacct
      661 gaagacttgg cttggaaggt tttggccgtc aatatttcag atatggcggc gatgggtgcg
      721 ataccgcgtt gggtgttgct gagcgcggct ttgcccgaat tggatgaggt atggctgaaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcgttgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgatgtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccgt ttgcccgggc ggcgcaggat gtttcagacg gcatcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaagttttag atgacggcgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgc ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgcgcctt cttcgcccaa
     2041 acggcgtttc ttatcggctt cgtattcctg atagttgccg tcgaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccaac ggtcgtgaga
     2161 aatcaccatc acgctgccgg caaattccaa caatgcgtct tccagcgcgc gcagggtttc
     2221 cacatcgagg tcattagacg gttcatccag cagcaataca ttgccgccgc tcaacaaggt
     2281 tttcgccaag tgcaaacgtc cgcgttcgcc gccggaaagc tgccccgtga ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgccc
     2401 gacctgtaaa atatcgcgac cttcggcaat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 ggaatcgggc tgctctttgc ccgcaatcat tttgaacagc gtagatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttatcg ccgaacgatt tggaaacatt tacaaattca atcacttcgt tacccaaacg
     2701 ctcggcaacg ggaataaaga tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcctca aaacgcgcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgc gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgcgttacc gcaacgactg tgccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 cgattccgca tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gcttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattat cgattttggc
     3181 atcccattcc ggcaggcgca gcgcgtcggc agcgatttcc aattcatgct ctgcaccgcc
     3241 gcccgtggac gaaccggccg cgataatcgc ttccaagcgg ccctgctctt ccgccaacgc
     3301 gtcaaaatcc gcatcgggat tggcatactc ggcatacact tcttccaagc gtttctgcgc
     3361 cgccgccact tcgcccaaac cgctttccac ttcctcgcgc acggtttttt caggatcaag
     3421 ctcaggctct tgcggcaggt agccgatttt gatgccgccc atcggcacgg cttcgccctc
     3481 aaattcctta tccacgcccg ccataatccg cagcacggtg gacttgcccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taataatggt
     3601 tttctgcggc ggcacaacct tgctcacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgctta
     3781 tccctttgaa attatataga caaaaaaata ataatgatag gggatcgccg ccccggcaac
     3841 catttcggat tttccaaag
//
LOCUS       DAWKOX010000172         3857 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.172, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000172 DAWKOX010000000
VERSION     DAWKOX010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3857
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.172"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            148..1665
                     /locus_tag="WJK78_001796"
     CDS             148..1665
                     /locus_tag="WJK78_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7598676.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRSVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAAAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNRNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSLAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGIAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1724..3505)
                     /locus_tag="WJK78_001797"
     CDS             complement(1724..3505)
                     /locus_tag="WJK78_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ7598677.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHAVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVKLYQRLRQPVPYAV
                     LSHLPDAQGQSAWTLCFSPELFLKIGSDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGTVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIESLEAEPRGLYTGSIGYLNPSSGGLGFEGAFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENRQCALLDRHLCRLKTSAQALNLPLPDGCENQIKQYIAHLPDGVFRVKARLASDG
                     ISLSRAVLNRLTDKQRVIISPAVLPAQNYLRRFKTTHRALFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFVKHRGQWLTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
BASE COUNT          806 a          858 c         1275 g          918 t
ORIGIN      
        1 gtgaaatccg ccctttgaaa atcgggcggc ggttttttgc ctgcccgctt tcagacggta
       61 aagccggttt tcacgggttt ctgcctgttt ttcggatggt ttgacgtgct tcggcggcgt
      121 gtttgccaga aaggtaaatg acagggtatg ttgtatttca gatacggttt tttggttgtt
      181 tggtgtgcgg caggtgtttc tgccgcctat ggggcggatg cgcccgcgat tttggatgac
      241 aaggcattgt tgcaggtgca gcggtcggtg tcggataagt gggcggaatc ggattggaaa
      301 gttgaaaatg atgccccgcg cgtggttgac ggggattttt tgttggcgca cccgaaaatg
      361 ttggaacata gtttgcgcga cgcgctcaac ggcaatcagg cggatttgat cgcttcgttg
      421 gcggatttgt atgccaagct gccggattat gacgcggttt tgtacggcag ggcgcgggct
      481 ttgctggcga aattagcggg aaggccggcg gcggcggtgg cgcggtatcg ggaactgcac
      541 ggggaaaatg cggcagacga gcggattttg ctggatttgg cggcggcgga gtttgacgat
      601 ttccgactga agtcggcaga aaggcatttt gcggaggcgg caaaattgga tttgccggcg
      661 ccggttttgg aaaatgtggg gcgttttcgg aaaaaaacgg aggggctgac gggctggcgt
      721 ttttcgggcg gcatcagccc ggcggtcaat agaaatgcca ataatgccgc gccgcagtat
      781 tgccggcaaa acggaggccg gcagatatgc agtgtcagcc gggcggagcg ggcggcaggg
      841 ttgaattatg aaatcgaggc ggaaaaactg acggcgttgg cagataatca ttatttgttg
      901 ttccgttcca atatcggcgg cacgagctat tatttcagta aaaaatcagc ttatgatgac
      961 gggttcggca gggcgtattt gggttggcag tataaaaatg cgcggcagac ggcggggatt
     1021 ttgccgtttt atcaggtgca gttgtcgggc agcgacggct ttgatgcgaa aacaaaacgg
     1081 gtaaacaacc gccgcctgcc gccgtatatg ctggcgcacg gagtcggcgt gcagctgtcc
     1141 catacttacc gcccaaaccc gggatggcaa ttttcggtcg cgctggaaca ttaccgccaa
     1201 cgctaccgcg aacaggatag ggcggaatac aataacggcc ggcaggacgg gttttatgtt
     1261 tcgttggcaa aacgtttggg tgaatcggca actgtgttcg gcggctggca gtttgtgcgg
     1321 tttgtgccga aacgtgaaac ggtgggcggc gcggtcaata atgccgccta ccggcgcaac
     1381 ggtgtttatg ccggttgggc gcaggagtgg cggcagttgg gcggtttgaa cagtcgggtt
     1441 tctgcgtctt atgcccgccg caactataag ggcattgcgg ctttctcgac agaggcgcaa
     1501 cgcaaccgcg aatggaatgt ctcgctggct ttgagccacg acaagttgtc gtacaaaggt
     1561 atcgtgccgg cgttgaatta tcgtttcggc aggacggaaa gtaatgtgcc gtatgcgaaa
     1621 cgccgcaaca gcgaggtgtt tgtgtcggcg gattggcggt tttgaatggt gggataatgc
     1681 cgtccgaact ttggaaacag gttcggacgg catttttgcg cgttcaggca agggcggcgg
     1741 caaatacgcc gcgcagggcg ttggagaggc ggatttcttc ggcttcttgc agtgtttttt
     1801 gtgtgatgtg tgtttcgatt acttgatttg tttgcaaata tttttgcggt tcgtccaata
     1861 cggcttggcg cattatgccg tttaaaatgt ctaaatctaa agagggcgta agccattgtc
     1921 cgcgatgttt gacgaacacg ttgcttctgc cgccttcgag caggatgccg tccgaattga
     1981 aaaacaggct gtcgaacgcg ccttgtgttt cggcggtttg ccacgcttgg tcgaagaggg
     2041 cgcggtgtgt ggttttgaag cggcgcaggt agttttgtgc gggcaggacg gcgggcgaaa
     2101 tgatgacgcg ttgtttgtcg gtcagacggt ttaaaacggc gcgggacagg ctgatgccgt
     2161 ctgaagcgag ccgggctttg acgcggaaca cgccgtcggg caaatgggcg atgtattgtt
     2221 tgatttgatt ttcgcaaccg tcgggcaggg gcaggttgag ggcttgggcg gaggttttca
     2281 gacggcatag gtggcggtcg agcagggcgc attgcctgtt ttccacgcgc agggtttcaa
     2341 aaatgccgaa gtcggggcgc aattcgttga ggaaacgggc tttccagccg cattcccgat
     2401 attcggcggc agggtcgctg tcgatgacga tgccggaacc gacaccgtac acgccttgat
     2461 aaatgccgtc tgaaagcggc gtgagcgata aggtgcggat gacgacgttg aacgcgcctt
     2521 caaaccccaa gccgccggaa ctcgggttca aatagccgat gctgcccgta taaagtccgc
     2581 gcggttcggc ttcgagcgat tcgataatct gcatactcat ttttttgggc gcaccggtga
     2641 tgctgccgca ggggaaggcg gcgcggagga tgtcggcgaa cgaggtgtgc ggcaaggctt
     2701 gggcttggat ggtgctggtc atctgccaaa cgctgccgaa acgcgatact ttaaacggtt
     2761 cgggtacgca tactgtgccg gtttgggcga ttttgccgag atcgttacgc agcaaatcga
     2821 caatcatcac gttttcggcg cggtttttcg ggtctgcttg caactcggcg gcgcggcgtt
     2881 cgtcttgtcc gtcgcccaaa atcggcgcgg tgcctttcat cggttcggtg ctgatggtgc
     2941 cgtccgaacc gattttgagg aagagttcgg gcgagaaaca cagcgtccac gcggattgcc
     3001 cttgtgcatc gggcaggtgg gacaaaacgg cataggggac gggctggcgc aggcgttggt
     3061 aaagtttgac gggattgccg taggcttgca ggtgcaggcg ggtagtgtag ttgatttgat
     3121 aggtgtcgcc gcgtcggatg gcttcgtgga tttggcggat atggtcgagg taatcggctt
     3181 cggatacgga ggattgcggc gtggaaatgc cggcggggag gccgtctgag tgtcgggcaa
     3241 gccagcttgc ggcatcggtg tcggcgcagt cggcaaacca gtgcagggca aggttgccgc
     3301 cgcgttcgga ctcgaccccc gtcagcggca aaccgaatcc gtagtctgca aacaacacgg
     3361 catgcagccc tttttgccag cccgattgca gcgcgccgtc caaagcatcg agttcttcgg
     3421 gacggaaaaa acggctttcc acatgatttt gatagcgttt tgcgcggccg cttacggcat
     3481 cgtcaaacag ggcgaaataa ggcatggcaa ttcggggcaa atgttttgat tatacgctct
     3541 ttttacacat attttcagac gattcggcaa atatcggcaa aatgtaattt tatgtagaga
     3601 aagtgggggg cgaaggtgta aaattgtgaa aacaaattcc gatttccaac ctgaaataca
     3661 ataaggagac ctttatgaca gaccaccagc tgcaaccgtt tgaaaacgta gaattaggcg
     3721 aaaagcaaga tcagctccaa gtatagtgga ttaacaaaaa ccagtacagc gttgcctcgc
     3781 cttggctcaa agagaacgat tctctaaggt gctgaagcac cgagtgaatc ggtttcgtac
     3841 tatctgtact gtctgcg
//
LOCUS       DAWKOX010000173         3847 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.173, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000173 DAWKOX010000000
VERSION     DAWKOX010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3847)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3847)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3847
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.173"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..2026)
                     /locus_tag="WJK78_001798"
     CDS             complement(<1..2026)
                     /locus_tag="WJK78_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ7598678.1"
                     /translation="MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNENWDKPTNIFPKI
                     FIESLCRINPDLSPDDARRLLTDIRLELDNEDLGQKFYERLTNQSGGKKLIDFQNFDN
                     NSFHVVTELPCINGDEEFRPDITLLVNGMPLVFIEVKKPNNKGGIGEERERMGKRAKN
                     SKFRRFINITQFMIFSNNMEYDDGATEPAQGAFYASSAYGKPVFNYFREEHKLNLAEL
                     LNTLSDGLENNVLQDNNLPVIKHSPEFISNKSPDTPTNRILTSLLCRERLSFLLQHGL
                     TYVKASQGLVQKHIMRYPQLFATLAIEKHLANGGKKGVIWHTQGSGKTALAYYNTRYL
                     THYYAKQGIVPKFYFIVDRLDLLKQAQREFTARDLVVHTIDSREAFAADIKSAQTLHN
                     HAGKAEITVVNIQKFQDDPDVVARNDYDLAIQRVYFLDEVHRSYNPKGSFLANLNQSD
                     VNAVKIGLTGTPLIGVTAGNVNTRELFGDYIHKYYYNASIADGYTLRLIREAISSQYK
                     AQLQAALAQLEVEKGSFDRKEIYAHPHFVRPMLDYILGDFAKFRKTNQDESLGAMVVC
                     DSAEQARQLFEHFQTASDHNFTAALILHDVGTKDERDQWVKDFKAGKTDILFVYNMLL
                     TGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSYRYGYVVDFADIEREF"
     gene            complement(2140..3450)
                     /locus_tag="WJK78_001799"
     CDS             complement(2140..3450)
                     /locus_tag="WJK78_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ7598679.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPIKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLAWLKSLDEEALKAK"
BASE COUNT          864 a          890 c         1091 g         1002 t
ORIGIN      
        1 caaattcgcg ttcgatgtcg gcaaaatcga caacatagcc gtaacggtaa gatttgtagg
       61 tgcggttgac gcgggtcagg gtttgtaaaa ggttatgggc tttgatgagt ctgcccaaat
      121 agagcttttt caggcgcggc gcgtcaaagc cggtcaaaag catgttgtac acaaacagga
      181 tgtcggtttt gcctgctttg aaatctttga cccattggtc gcgttcgtct ttggtgccga
      241 cgtcgtgcaa tatcagtgcg gcggtgaaat tatggtctga ggccgtctga aaatgctcaa
      301 aaagctggcg cgcctgttct gcgctatcgc aaacgaccat ggcgccgagg ctctcgtctt
      361 ggttggtttt tctgaatttg gcgaagtcgc ccaagatgta atcgagcatc gggcggacga
      421 aatgcggatg ggcgtagatt tctttgcggt caaagctgcc tttttcgact tcaagctgcg
      481 ccagtgcagc ctgcaattgg gctttgtatt ggctgctgat ggcttcgcga atcaggcgca
      541 gggtgtagcc gtcggcgatg gaggcgttgt aatagtattt atggatgtag tcgccgaaga
      601 gttcgcgggt attgacgttg cctgcggtta cgccgataag cggcgtgcca gtcagcccga
      661 ttttgacggc gtttacgtcg gactggttga ggttggcaag aaacgagcct ttggggttgt
      721 agctgcggtg tacttcgtcg agaaaataga cgcgctgaat ggcgaggtcg tagtcgttac
      781 gagcgacgac atcggggtcg tcttggaatt tttggatatt aacaacagtg atttccgctt
      841 tgcctgcgtg gttgtgcaaa gtttgggcgg atttgatgtc ggcagcaaag gcttcgcggc
      901 tgtcgatggt atggacgact aaatcgcggg cagtaaattc gcgctgcgcc tgtttcaata
      961 aatcaagcct gtccacgatg aaatagaatt tcggcacgat gccctgtttg gcataatagt
     1021 gggtcaggta gcgggtgttg taataggcaa gcgcggtttt gccagagcct tgggtgtgcc
     1081 aaatcacgcc ttttttgccg ccgtttgcca aatgtttttc aatggcgaga gtggcaaata
     1141 gctgcggata ccgcatgatg tgtttttgca ccaagccttg acttgctttg acgtaagtca
     1201 gcccgtgttg cagaagaaaa gaaagacgtt cgcggcaaag cagcgaagtc aggatgcggt
     1261 tggtcggcgt atcgggcgat ttattgctga taaattcggg gctgtgtttg ataacgggca
     1321 ggttgttgtc ttgcaggacg ttgttttcga ggccgtctga aagcgtgttc aataattcgg
     1381 caagatttaa tttatgttct tcgcggaagt agttaaacac gggcttaccg taagcagacg
     1441 aagcgtaaaa cgcgccttgt gccggttcgg ttgcgccgtc gtcgtattcc atgttgttgg
     1501 aaaaaatcat gaattgggtg atgttgatga aacggcgaaa tttggaattt ttcgcacgtt
     1561 tgcccatgcg ctcccgctct tcgccgattc cgcctttgtt gttgggcttt ttgacttcga
     1621 taaaaaccaa aggcatgccg tttaccagca gggtaatgtc ggggcggaat tcttcatcgc
     1681 cgttgataca gggcaattcg gttacaacgt ggaagctgtt gttatcaaaa ttttggaagt
     1741 cgatcagttt cttgccgccg gattgattgg taaggcgttc gtaaaacttt tgccccaagt
     1801 cttcgttgtc cagttctaag cgtatgtcgg tcagcaaacg gcgtgcatcg tccggcgaca
     1861 aatcgggatt gatgcggcag aggctttcta taaagatttt gggaaagatg ttggttggtt
     1921 tatcccaatt ttcgtttttg agcgagaggt agtcgtagcc caagcgcatc aggtgcaaaa
     1981 cggcggggat tttgacgcgg gaattttcgt tgtgagtttg ggacataaac gtaatgattc
     2041 atcaaaattt attgaaacgg attataacac ctgaaaaacc cgatacgcct ttttggtgta
     2101 ccggctttgc cataccgttc tgcttcagac ggcattgctt cattttgcct ttaatgcctc
     2161 ttcatccagc gatttgagcc acgccagctt ttcgccgatt ttgatttcca acccgcgcgg
     2221 gacgggttgg tagaagtccg gttcgtccaa gccgtcgggc atatagcttt cgccggcggc
     2281 gtaggcgttc ggttcgtcgt gggcgtagcg gtattcgcgt ccgtagccca attccttcat
     2341 cagcttgatc ggggcgttgc gcaggtggac gggcacttcg tcgctagcgt tttctttgac
     2401 gaagtggcgc atttggttgt atgccttgta gcccgcgttg gatttcgcgg cggcggcaag
     2461 atacaatacc gcttgcgcca aagccagttc gccttcgggc gagcctaagc gttcgaaggt
     2521 ggcggcggca tcgttggcga tttggaaggc gcgcgggtcg gcaagcccga tgtcttccca
     2581 agcgatacgc acgatgcggc gggcgaggta gcgcgggtcg gtgccgccgt cgagcatacg
     2641 gcagaaccaa tacagcgcgg cgttcggatg cgaaccgcgc acggatttgt gcagggcgga
     2701 gatttggttg tagaaactct cgccgccttt gtcgaaacgg cggatttgcg ccccgagact
     2761 gtcggcgaga aattcggcgg ttaagttttt cagacgacgt gtatcggcgg cgcgtaaaag
     2821 ttgttccaac aaattcaaca atctgcgcgc atcaccgtcg gcggtattca cgagtaattt
     2881 ttgcgcatcc gtttcaatcg taaactcttg gtattcaggc aaagccaata ccttggcaat
     2941 cagctttttc aggtcgtctg aagacaaggg ttgcaaaaca tacacctgag cgcggctcaa
     3001 cagcgcggga ttgacttcaa acgacggatt ttccgtcgtc gcaccaataa aggttagcaa
     3061 accgctttcg acatgcggca aaaacgcgtc ctgctgcgcc ttgttgaagc ggtggacttc
     3121 atcgacaaac aaaatcgtcg cgcgtccctg ctgcaaagcg atttcggctt tatcgattgc
     3181 ctcgcggatg tccttcacgc cggaaaatac ggcggaaaca ggcaaaaact gggcgttgaa
     3241 actctgcgcc aaaatccgcg ccaacgtcgt cttgcccacg cccggcggcc cccacagcaa
     3301 catagaatgc ggcttgccgc cttctaccgc cacgcgcaaa ggtttacctt cgccgatgag
     3361 gtgttcctgc cccaccacgt cgtcaagcgt atgcggacgc aatcgttcgg caagcggcgc
     3421 gtcgggttct cgggcaaaca aatcggtcat aacggctccg tcaacaggtt ttcaaacaat
     3481 atgattatac ggcagggaac ggcggcgtgc cgcatacgga ttccgcccct ccgtttgcct
     3541 taagccgata ttaggcgcat actggaaaag acgagagact tcacacaata tatccggcac
     3601 ggagaccgat tccgcatcgg catgacaata cccaaatcag cgtttcaatt aaacattaag
     3661 gagactaaaa tagaaaattt gctttatcta ccattgcttt gttgattcaa tcggcattat
     3721 gttttgaggc ggaagcccat gaatatacta atattcaaga gatggaatgg gtgtctttat
     3781 tttctgatcc gcaaagagac gatgatagtc ttataaccct taaagatgaa aaaatcactg
     3841 taaaaaa
//
LOCUS       DAWKOX010000174         3790 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.174, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000174 DAWKOX010000000
VERSION     DAWKOX010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3790
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.174"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            346..3546
                     /gene="nalP"
                     /locus_tag="WJK78_001800"
     CDS             346..3546
                     /gene="nalP"
                     /locus_tag="WJK78_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HEZ7598680.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGTSAPDFNAGGT
                     GIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHTG
                     DFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNEN
                     YKNYTAYMRKEAPEDGDGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIGG
                     RSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTTS
                     RAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFIF
                     SASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAPY
                     EASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAVG
                     VDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGSQ
                     LQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIVYLA
                     DTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAGYLN
                     RTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNAA
                     RTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGIR
                     PYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHNA
                     TGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTWSEN
                     SANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLMQ
                     LGALGGVNVPFSATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAGL
                     KLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGLG
                     ADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1027 a         1028 c         1003 g          732 t
ORIGIN      
        1 gaaccgattc acttgttaaa gaatcgttct ctttgagcta aggcgaggca acgccgtact
       61 ggtttttgtt catccactat aactagggaa attcaaatta agttagaatt atccctataa
      121 gaaaaagccg tctaagccgg tataaacaaa ataaactcat tgagctattt gtcgaaagtt
      181 caaatttcca ttttaaaaca attagtaaaa tcgagtttat cctagttgtc caagacaacc
      241 cctataataa tataattcaa aatataaaaa tgggttacat ctaaacatta cggaattttt
      301 attccctcgc ctgaattcta ttgtcagatt caaggagacc tcatcatgcg aacgacccca
      361 accttcccta caaaaacttt caaaccggct gccatggcgt tagctgttgc aacaacactt
      421 tctgcctgct taggcggcgg cggcacttct gcgcccgact tcaatgcagg cggcaccggt
      481 atcggcagca acagcagggc aacaacagcg aaatcagcag cagtatctta cgccggtatc
      541 aagaacgaaa tgtgcaaaga cagaagcatg ctctgtgccg gtcgggatga cgttgcggtt
      601 acagacaggg atgccaaaat caatgccccc cccccgaatc tgcataccgg agactttaca
      661 aacccaaatg acgcatacaa gaatttgatc aacctcaaac ctgcaattga agcaggctat
      721 acaggacgcg gggtagaggt aggtatcgtc gacacaggcg aatccgtcgg cagcatatcc
      781 tttcccgaac tgtatggcag aaaagaacac ggctataacg aaaattacaa aaactatacg
      841 gcgtatatgc ggaaggaagc gcctgaagac ggagacggta aagacattga agcttctttc
      901 gacgatgagg ccgttataga gactgaagca aagccgacgg atatccgcca cgtaaaagaa
      961 atcggacaca tcgatgtggt ctcccatatt attggcgggc gttccgtgga cggcagacct
     1021 gcaggcggta ttgcgcccga tgcgacgcta cacataatga atacgcatga tggaaccaag
     1081 aacgaaataa tgtctgcagc catccgcaat gcatgggtca agctgggcga acgtggcgtg
     1141 cgcatcgtca ataacagttt tggaacaaca tcgagggcag gcactgccga ccatttccaa
     1201 atagccaatt cggaggagca gtaccgccaa gcgttgctcg cctattccgg cggtgataaa
     1261 acagacgagg gtatccgcct gatgcaacag agcgattacg gcaacttgtc ctaccacatc
     1321 cgtaataaaa acatgctttt cattttttcg gcaagcaatg acgcacaagc tcagcccaac
     1381 acactgaccc tattgccatt ttatgaaaaa gatgctcaaa aaggcattat cacagtcgca
     1441 ggcgtagacc gcagtggaga aaagttcaat ggctccaacc attgcggaat tactgccatg
     1501 tggtgcctat cggcacccta tgaagcaagc gtccgtttca cccgtacaaa cccgattcaa
     1561 attgccggaa catccttttc cgcacccatc gtaaccggca cggcggctct gctgctgcag
     1621 aaatacccgt ggatgagcaa cgacaacctg cgtaccacgc tgctgacaac ggctcaggac
     1681 atcggtgcag tcggcgtgga cagcaagttc ggctggggac tgctggatgc gggtaaggcc
     1741 atgaacggac ccgcgtcctt tccgttcggc gactttaccg ccgatacgaa aggtacatcc
     1801 gatattgcct actccttccg taacgacatt tcaggcacgg gcggcctgat caaaaaaggc
     1861 ggcagccaac tgcaactgca cggcaacaac acctatacgg gcaaaaccat tatcgaaggc
     1921 ggttcgctgg tgttgtacgg caacaacaaa tcggatatgc gcgtcgaaac caaaggtgcg
     1981 ctgatttata acggggcggc atccggcggt agcctgaaca gcgacggcat tgtctatctg
     2041 gcagataccg accgatccgg cgcaaacgaa accgtgcaca tcaaaggcga tctgcagctg
     2101 ggcggcgaag gtacgctgta cacacgtttg ggcaaactgc tgaaagtgga cggtacggcg
     2161 atgaccggcg gcaagctgta catgtcggca cgcggcaaag gggcaggcta tctcaaccgt
     2221 accggacaac gtgttccctt cctgagtgcc gccaaaatcg ggcgggatta ttctttcttc
     2281 acaaacatcg aaaccgacgg tggtctgctg gcttccctcg acagcgtcga aaaaacagcg
     2341 ggcagtgaag gcgacacgct gtcctattat gtccgtcgcg gcaatgcggc acggactgct
     2401 tcggcagcgg cacattccgc gcccgccggt ctgaaacacg ccgtagaaca gggcggcagc
     2461 aatctggaaa acctgatggt cgaactggat gcctccgaat catccgcaac acccgagacg
     2521 gttgaaactg cggccgccga ccgcacagat atgccgggca tccgccccta cggcgcaact
     2581 ttccgcgcag cggcagccgt acagcatgcg aatgccgccg acggtgtacg catcttcaac
     2641 agtctcgccg ctaccgtcta tgccgacagt accgccgccc atgccgatat gcagggacgc
     2701 cggctgaaag ccgtatcgga cgggttggac cacaacgcta cgggtctgcg cgtcatcgcg
     2761 caaacccaac aggacggtgg aacgtgggaa cagggcggtg ttgaaggcaa aatgcgcggc
     2821 agtacccaaa ccgtcggcat tgccgcgaaa accggcgaaa atacgacagc agccgccaca
     2881 ctgggcatgg gacacagcac atggagcgaa aacagtgcaa atgcaaaaac cgacagcatt
     2941 agtctgtttg caggcatacg gcacgatgcg ggcgatatcg gctatctcaa aggcctgttc
     3001 tcctacggac gctacaaaaa cagcatcagc cgcagcaccg gtgcggacga acatgcggaa
     3061 ggcagcgtca acggcacgct gatgcagctg ggcgcactgg gcggtgtcaa cgttccgttt
     3121 tccgcaacgg gagatttgac ggtcgaaggc ggtctgcgct acgacctgct caaacaggat
     3181 gcattcgccg aaaaaggcag tgctttgggc tggagcggca acagcctcac tgaaggcaca
     3241 ctggtcggac tcgcgggtct gaagctgtcg caacccttga gcgataaagc cgtcctgttt
     3301 gcaacggcgg gcgtggaacg cgacctgaac ggacgcgact acacggtaac gggcggcttt
     3361 accggcgcga ctgcagcaac cggcaagacg ggggcacgca atatgccgca cacccgcctg
     3421 gttgccggtc tgggcgcgga tgtcgaattc ggcaacggct ggaacggctt ggcacgttac
     3481 agctacgccg gttccaaaca gtacggcaac cacagcggac gagtcggcgt aggctaccgg
     3541 ttctgacgga caggaagcag acagccgcaa agatcacggt ctttgcggct gtttcttatg
     3601 aaaagaaaac cctattccaa ttgcctgctt ctattgtttc aagacttctt ccaaagattc
     3661 ggcattaatc agatgtatag cggattaaca aaaatcagga caaggcggcg aagccgcaga
     3721 cagtacaaat agtacggaac cgattcactc ggtgcttgag caccttagag aatcgtttct
     3781 ttgagctaag
//
LOCUS       DAWKOX010000175         3762 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.175, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000175 DAWKOX010000000
VERSION     DAWKOX010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3762)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3762)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3762
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.175"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(88..906)
                     /locus_tag="WJK78_001801"
     CDS             complement(88..906)
                     /locus_tag="WJK78_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7598681.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPDPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FAPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDIFRNFSL"
     gene            complement(986..2236)
                     /locus_tag="WJK78_001802"
     CDS             complement(986..2236)
                     /locus_tag="WJK78_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ7598682.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRNIR
                     AGQNTPDTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDADDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WJK78_001803"
     CDS             complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WJK78_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ7598683.1"
                     /translation="MSDLPSISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGDGRKCLLTAHTERGRESLPL"
     gene            2896..3708
                     /locus_tag="WJK78_001804"
     CDS             2896..3708
                     /locus_tag="WJK78_001804"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ7598684.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          837 a          914 c         1114 g          897 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggtgtg tccactgtgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcggaaaa tatccatatc
      121 aggctgtggg ccgtacttat ttacggtatt ttcgtatgcc gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggcg aatacgcaag gaaaaaaacc ggagcgcatc agcgacaagg tcatacagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaagg gattttctat tttgggggct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttggataa aggcgtgtag tctgtcccgc ttatggtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttccg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggatcg gggctgtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactgt acacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gtccgttaaa acagataaag gaagccgatc ggacaattcg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggcgga agtaggttta tgcctgcctt catccgacaa
      961 ctatattgaa acaccgcctt ttcaatcaac cccgcttcaa tacggatgta ttgatgtagc
     1021 gttggacgcc cgaggcaatg gattgggcgc actgccggcg gaaggattcg ctgcccagca
     1081 gcttctcttc ggcaggattg gacaggaagg cggtttcgac caggatagac ggcatatcgg
     1141 gcgcgcgcaa aacggcgaaa ttggcttcgt ccaccctgcc tttgtgcaga tggttgagcc
     1201 tgcccaattc ttcaagcacc agtttgccga gtttgcggct gtcgcgcagt gtggcggttt
     1261 gggtcatatc gagcagggcg gtatcgacat tgcggttgcc gctggtcggt acgccgccga
     1321 ccgcgtcggc attgttttgc gtctgttcca agaatttggc ggcagagctg gtcgcgcctt
     1381 tggtgtttaa catataaacc cccgtgccgc gcgcggaggg gctggtgaag gcatcggcgt
     1441 ggatggagac aaatacgtcc gcccgccgtg cgcgcccttt ggcgacacgc acgcccaatg
     1501 ggatgaacac gtcttcgttg cgcgtcataa agacgttgta acccaaggct tccaattgtt
     1561 ttttggtttc gcgggcgatg gagaggacga cgtgtttttc ctgcaaaccg cccgggctga
     1621 cggcgccggg gtcttcgccg ccgtgtccgg ggtcgatcat aatgacgggt ctgcgcccgt
     1681 ttttgccgcg ttcggtttgt gcgggagtgt tttgagcgag gtcggcttca ggggagccgc
     1741 gacgggtttt gttcaggctg ccgttgagca gcgccatcat cggatcgtcg gcatccatcc
     1801 cttgcggata gagatcgacg acgaggcggt ttttaaagcc gccgacgggg gggagggaaa
     1861 aaacttgcgc gtaggaaggc tgtttcaaat cgatgacgag gcggacggtg tcgggcgtgt
     1921 tctgaccggc gcgtatattg cggataaagg gatcgtccgc cataaccttc tgagacagtc
     1981 cgtgcaatac ggtattgatg tttgcgtttt gtatgtcgac gaccagcctg cccggattgt
     2041 cgagcgcgaa gtgctggtat ttgagcgcgg cggtgctttc cagcgttagg cgggtgtagg
     2101 tgtgcgacgg ccatatccgt gcggcggtga attgtggtgc gcgtaccgtt ttggcaacgg
     2161 cggatgcgat ggggcttagg gcgaacagtg tgccggcggt acggcggatg atttgtcttc
     2221 gtgtcagttt ggtcatagcg gcaggctttc gcgtcctcgt tcggtatggg cggtcagcag
     2281 gcattttctg ccgtcgccgt cgtgtgtcaa tgttgcggtg atgtcggcag gcggggtaaa
     2341 ttccccacct tgttgcggcc attcgatcag gcagacgctg tttgcggcaa acagttcgtc
     2401 caatccggca tcttcccatt cttcggggaa cgagaagcgg tagaggtcga aatggtgcaa
     2461 ggtgaagcgt tccagcggat aagattcgac gatggcgtag gtcgggcttt tgactgcgcc
     2521 ctgatgaccc aatccgcgca ggatgccgcg tgtcagcgtg gttttgcccg cacccaaatc
     2581 cccctcgaga taaatgacca gcggcgcgtt taaacgggaa gaccacgccg cgcccaaatc
     2641 gagtgtggcg gcttcgtcgg caaggaatcg ggagatagag ggtaaatcag acatggaaac
     2701 ggtttgttgt aaggtctagg gtattatggg cagttttgca ggttttgcaa actttgcacc
     2761 cgaggggcgg atgcttcttg tccgagcatt ataacagcca aatccgcgtt ctgctttcag
     2821 acggcaacgg ctgtcaagaa aaagcggcgc gtgtacaata cgcggattgt atgtttagga
     2881 cagattggaa aaaggatgga aaatatcggc aggcagcgac ccatcggcgt ttttgactcg
     2941 ggaatcggcg gtttgaccaa tgtacgcgcg ctgatggagc ggctgccgat ggagaacatc
     3001 atttatttcg gcgacacggc gcgcgtgcct tacgggacga aatctaaggc gaccatcgaa
     3061 aatttctcga tgcagattgt cgatttttta ttggaacacg atgttaaggc gatggttatc
     3121 gcgtgcaata cgattgcggc ggtggcgggg cagaaaatcc gtcaaaagac gggcaatatg
     3181 cctgtgttgg acgtgatttc cgccggcgcg aaagccgcgc tggcaacgac gcgcaacaat
     3241 aaaatcggca ttatcgccac caataccaca gtcaacagca atgcttatgc gcgcgccatc
     3301 cacagggaca accccgacac gctcgtccgc acgcaggccg cgccgctgct cgtccccttg
     3361 gtggaggaag gttggttgga acacgaagtt acccgcctga ccgtatgcga atacctcaaa
     3421 ccattgcttg cagacggcat cgatacgctg gtgttgggct gcacgcactt tcccttgctc
     3481 aagcccttaa tcggcaggga ggcgcacaat gtcgcgctgg tcgattccgc gattacgact
     3541 gccgaagaaa ccgcacgcgt ccttgcgcag gagggattac tcaataccga caacaacaat
     3601 cccgactacc gtttttacgt cagcgatatt cctttgaaat tcagaaccat cggcgagcgt
     3661 tttctgggca ggacgatgga gcagattgaa atggtgtctt tgggttaaaa cgatgacgga
     3721 aagctgcccg agattacaga aacctaaaat cccgtcattc cc
//
LOCUS       DAWKOX010000176         3748 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.176, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000176 DAWKOX010000000
VERSION     DAWKOX010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3748
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.176"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(184..339)
                     /gene="rpmG"
                     /locus_tag="WJK78_001805"
     CDS             complement(184..339)
                     /gene="rpmG"
                     /locus_tag="WJK78_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ7598685.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(371..604)
                     /gene="rpmB"
                     /locus_tag="WJK78_001806"
     CDS             complement(371..604)
                     /gene="rpmB"
                     /locus_tag="WJK78_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ7598686.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(854..2380)
                     /gene="farB"
                     /locus_tag="WJK78_001807"
     CDS             complement(854..2380)
                     /gene="farB"
                     /locus_tag="WJK78_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ7598687.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     ALVFFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPIIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSFVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            complement(2404..3558)
                     /gene="farA"
                     /locus_tag="WJK78_001808"
     CDS             complement(2404..3558)
                     /gene="farA"
                     /locus_tag="WJK78_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ7598688.1"
                     /translation="MDTHTDETKLQNTQAKRKRRLTALTLLFALAAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RAAVSQAQAAVKAALAEESSARAALGGDVSLREQPAVQTAIGRLKDAWLNLQRTQIRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT          930 a         1037 c          936 g          845 t
ORIGIN      
        1 gcagacagta caaatagtac ggaaccgatt cacttggtgc ttcagcacct tagagaatcg
       61 ttctctatcc ttggcagacg gtttgcagca gattcgcata cggcagatgt ttcaagcgga
      121 aaagaaacac gataaaaata aaaaagcctc cgaacagtcg gaggctttgc tttcaaactg
      181 aaattatttc agtttggttt ctttgtacac tacgtgtttg cgggcaaccg gatcgaattt
      241 tttaatttcc agtttgccgg gcatagtgcg tttatttttg gtagtggtgt agaagtgacc
      301 agtacctgca ctggattcca gtttgatttt atcgcgcatt gcagtaatcc ttaattaaat
      361 agtgtttaaa ttaagcttcg ccgcgagcac gcaaatcagc caatacgaca tcaatgccta
      421 ctttgtcgat ggtacgcagt gcagcgttgg aaacgcgcag gcgaacccag cggttttcac
      481 tttctaccca aaaacgacgt gattgcaagt tgggcaaaaa acggcgtttg gttttgttgt
      541 tggcgtgcga tacgttgttg ccggacatcg ggcgtttgcc ggtcactttg caaactcgtg
      601 ccataatcag tctccaaact tctaaaatag taaaacgcga tttataccac gaaaaacagt
      661 gttagttcaa gtgttttaaa gaaaaacggc tgttttgcgc ggataatcct tccgattgtc
      721 gcatctgtgg aacgtttgca ggtgcgaaac agatggggcg cgattatagc ggatttcggg
      781 aactgctgca ttcaaaatgc cgtccgaaca tatttccagt attttcagac ggcatttcaa
      841 gttttcaaat ccctcaatgt ccaccgccgc cgccgttgtg gaacggcggt tttgccagcc
      901 atatgacagg aatcatgatg atgaacagca ggctgcctgc cataaagatt tcattcgatc
      961 cgatgatgaa gccctgctgg gtaatggtat tgttgatgat acctagggtt tgaatgtcgg
     1021 aaatgccttg ttgggacaaa tgcgccgccg tttcgtgcaa tgttgcggaa tagggcgtga
     1081 tgtgttcggc aaagcgtgtg tggtgcaacg cttcgcgccg ttcccacagg gtactgacga
     1141 atgatacgcc gacaccgccc atcagcacgc gcaagaaatt cgacaggctg ccggcggcgg
     1201 caatctgtcc gcccttcata tgcgacagtg tgatggtggt cagcggcagg aagaacatgg
     1261 caacgcctgc cccctgccaa aactgcggcc agatgacgtt gccgatatcc atgtcggcat
     1321 aaaaatcggt gcgccaatag aaagtgaagg caaaagtcag gaagctggcg gttacgagca
     1381 ggcgcatatc gattttattg ccgaacctgc cgataatggg ggacaggaag acgggcagga
     1441 tgccgacggg tgcggcggca agccccgccc acgtggaggt atagcccagg ttggtctgca
     1501 acactaacgg cagcaaggtc agcgtcccca tatacaccat aaaacccaat gatgtggcaa
     1561 ttacgccgac ggtaaaattc cgatctttaa acagcgataa atcgacaatc ggatattttt
     1621 ctcccaattc ccaaacaata aaatacgaca aacacaccag tgcgactacg cccaaggtaa
     1681 tgatttctcc agaggcgaac cagtcgagtt ccttacccct gtccagcatc atctgtaacg
     1741 cgccgatacc gactaccatc aatgtaagcc cgacatagtc ggtcggcatt ttaacggttt
     1801 ccgtttcccg atatttcaaa tgtttccatg taatccatgc cgatatgata ccgataggga
     1861 tattaatgaa gaaaatccaa ccccaatgcc agtttccgga aatccagccg ccgagtatcg
     1921 gcccgagaac aggggcgaca acgacggtca ttgcccacaa tgccagtgcc agcgtccgtt
     1981 ttgcgggcgg ataggatgcc attaacaggc tttgcgacag gggaatcagc ggcccggcga
     2041 taaaaccctg caagatgcgg aaaaacacca aagcctgaag gttgggcgcg atgccgcaca
     2101 gccatgatgt gatgacgaaa ccgacagcgg cggcggtaaa cagtttgacc tcgccgatac
     2161 gttttgccaa aaagcccgtt aacggcacgg aaacggcgtt tgccacagca aaagaagtaa
     2221 tgacccacgt cccctgcgtg gttgccgcac cgaggttgcc ggcgatgacg ggaacggcga
     2281 cattggcgat agtcgtatct aaaacttcca taaatacggc aagccccaaa gacagcgtaa
     2341 cccacgccaa tgccgcaccc ttaagcggtg gataatccat tgtgtcctcc gtttcagacg
     2401 gcatcagggc gcggattgcc cgaggatttc atcgaccgtc cgatcgactt ccgaccagtc
     2461 ggtactttcc atttccggca atgccgcacc cggcgttttt gaaacaggcg cgcctgcggc
     2521 ggaagtatcc actttaaccg tcatcgacaa accgatacgc aacggatgcc tgtccacatc
     2581 ttcgcggttc agcacgatac ggacggggac gcgctgcacc actttaatcc agttgcccgt
     2641 tgcgttttgc gccggaatca gcgaaaacgc gctgcccgta cctgccgaaa accctgccac
     2701 cctgccgcga taaacaattt gtttgccgta caaatcggac accagttcgg caggctgtcc
     2761 gattttcata tgccgcaact gcgtctcttt aaaattggca tccacccaca catccgacag
     2821 cggcaccacc gccatcagcg gcgcgcctgc cgccacctgc tgcccgacct gcaccgaacg
     2881 cttcgccacc tgaccgtccg ccggcgcgcg gatttgcgtc cgctgaaggt tcaaccacgc
     2941 atctttcaac ctgccgattg ccgtctgaac cgccggctgt tcgcgcaaag aaacatctcc
     3001 gcccaaagcc gcgcgtgccg aagattcttc cgccaaagcc gctttgaccg ccgcctgcgc
     3061 ctgagacact gccgcacggg cgtgtgccag ctcttcggcg gacaccgcgc ccgattccgc
     3121 caaagcagac cggcggcgca aatcatcctg tgcgcgtgcc aaatccgccc ggcgcaaggc
     3181 aacctgcgcc cccgcctgcg aagtggcggc attttgccgg cggttttgcc gcaccgcctg
     3241 aaccagctcg ttttttgccc gctcgtaagc cagcacatca ttatcgtcgt ccaataccgc
     3301 cagcacgtcg ccttttttca cggcatccgt atcgtcgtgc aaaaccttcc gcaccgtacc
     3361 gcccttttgc ggcgtaacct gaaccacgcg tccggcaaca taagcgtctt ccgtttcctc
     3421 ttcgtgctgc caccataaaa aaaacgccga cccggcggct gcggcggcaa gcgcgaacag
     3481 cagcgtcaat gccgtcaggc ggcgtttgcg tttggcttgc gtgttttgaa gttttgtttc
     3541 gtccgtgtgc gtatccataa gattgggttc cgaatttcct gatttcatat aaacaatgtt
     3601 ctttcaatag gaagcagatt ctatatccgc gcaataacgc aatcaagtca gtattttaga
     3661 tgcaatattc aaaaaacaac gcttcaggcg gcaaaactga aaatatattt cgtttatata
     3721 atggattaac aaaaatcagg acaaggcg
//
LOCUS       DAWKOX010000177         3743 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.177, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000177 DAWKOX010000000
VERSION     DAWKOX010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.177"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(159..2288)
                     /locus_tag="WJK78_001809"
     CDS             complement(159..2288)
                     /locus_tag="WJK78_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ7598689.1"
                     /translation="MSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPIKRLAMATLPALVWCDDGNHFILAKTDGEGEHAQFLIQ
                     DLVTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARRELEQIRNFLTGQALTSVL
                     DLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQSF
                     LVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVTV
                     ATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDIL
                     NAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSGS
                     GKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNIA
                     LTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALIT
                     NPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKGR
                     IVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            complement(3071..3724)
                     /locus_tag="WJK78_001810"
     CDS             complement(3071..3724)
                     /locus_tag="WJK78_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7598690.1"
                     /translation="MKTTHCKLKKKVQKELLRFFVLEVTARSAADILGIQPDSAILFY
                     RTIRMVISHYPALAADEVFEGSVELDESYFGGRRKGRRGRGAAGKVVVFGILKRNGRV
                     YTVVVDNARSETLLPVIKRKIMPDSIVYTDSLSSYDKLHVSGFIHHRINHSKEFADRQ
                     NHINGIENFWNQAKRALRKYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI"
BASE COUNT         1058 a          998 c          842 g          845 t
ORIGIN      
        1 gatgagtgaa aaagaagtgc aggctgccta aaaagacaga aaaagtcttt ccggcagcct
       61 gcactttggt ttcatttcag tcagtaaacc cagtaaacga cggtctaaaa acgcagaacg
      121 ttacgaaaaa agcagcctac acgcccatcc cccgccttct acccgttctg taaatcatac
      181 agatagcggt aatatccgtt cggcttcgcc agcaattcct gctgtgttcc cgcttccaca
      241 atcctgcctt tatccatggc aatgatccgg tgtgccgttt taacggtgga cagacggtgg
      301 gcgataatca gcaccgtccg gttggcgcaa atggcctgca tgttctgcat aatcgctcgt
      361 tcactttcat aatccagcgc gctggtggct tcgtcaaaaa tcagaatgcg cggattggtg
      421 attaacgcgc gggcaatcgc aatacgctgc cgctgtccgc ccgacaagcc ggccccttgt
      481 tcgcccacca cggtgccgta gccttccggc agctccataa taaactcgtg tgcgcccgcc
      541 agtttggctg cttcgataat gcgttccagc ggcatacccg tatccgtcag cgcgatattg
      601 tcgcgtatgc tgcggttgag cagcacattc tcctgcaaga ccacgccgac ctgccgccgc
      661 agccaggcag gagcggccaa agccaaatcg ttgccgtcca ccaacacccg tccctgctcc
      721 ggtacataca gacgctgcac caatttggtg agtgtggatt tgcccgaccc cgaacgtccc
      781 acaatcccca gcacttcccc cgcccgaatc cgcaggttca aatcctgcaa aatcagcctg
      841 ccgtccgcct tatagcggaa atcgacatgt tcgaacgtaa tctccccccg gatatcgggc
      901 aaagccaaat gcgaagacgc attctcggtc ggcgcattca gaatatcccc caaacgcgcc
      961 accgaaatcc ccacctgctg gaaatcctgc cacaactgcg ccaaacggat aacaggcgcc
     1021 gccacctgtc ccgagagcat attaaacgca atcagctgcc ccaccgtcag cttgccctca
     1081 attaccagcc gtgcgccaat ccacaacgtc gccaccgtca ccagcttctg aatcagctgc
     1141 accccctgct ggccgaccac cgccaacttc gttacccgaa atcccgaagc cacataagcc
     1201 gccaactgat tgtcccaacg ctgcgtcatc tgcggctcta ccgccatcgc ctttaccgta
     1261 cccaccgcag tgatgctttc tactaaaaac gactggttgt ctgcattgcg cgcgaactta
     1321 tcgttcagac gcgtccgcag tatcggactg ataaatgccg accaaaacgc ataggcaggc
     1381 aacgaagcca ataccaccca agtcagagtg gagctgtaat accacatcac cgccagaaag
     1441 ataaacgaaa acgccaaatc caacaccgaa gtcagcgcct gaccggtcaa gaaattgcga
     1501 atctgctcca attcccgccg agccaccgta tcacccactc gtctgtgctc gaaataggat
     1561 aaaggcaggg aaagcagatg ccggaacaaa cgcgcgccca attccacatc aatacgtgaa
     1621 gtcgtatgtg caaacagata cgtccgcaaa ccgcccaaca caatctcaaa cagcgacacc
     1681 accaacaaag ccaccgacac cacatccaaa gtagagaatc cccgatgtac cagcaccttg
     1741 tccatcacca cttggaaaaa cagaggcgta atcagcgcaa acagctgcaa caccaccgac
     1801 accaccaata cttcaaaaaa caaccggcgg tatttgatta ccgccggaat aaaccaggta
     1861 aagtcaaact ttgccaaact gcccaatacc gaagcgcggg aagcaaccaa tatcagtttg
     1921 cccgaatatc tgttagaaaa ttcggcaaaa gacaataccg cagacttatt cgtaaccaaa
     1981 tcctgtatca aaaattgggc atgctcaccc tcaccgtctg ttttggccaa aatgaaatgg
     2041 ttgccgtcat cacaccatac caatgcgggt aaagtcgcca tagccaaacg tttaataggc
     2101 tggcggacta cctttgcctt caatcccaaa gatttggcgg ctaacagcca ttgcgtttca
     2161 tttaaatcgc tctgtgcgga agtacaaaat tcatgctgta tatcggcagg attggcggca
     2221 atgccgtggt aatgggcgag gatgatgagg gcggaaaggg cggggagcgg tgcggatacg
     2281 atagacataa ataaaatata gttagattgg atgtggataa cggctggctg gaaaaggaat
     2341 atattaagta gaaagaaata tataaataaa acagcagaac gcattgtaag gatatatatg
     2401 ggaattgtaa agagaaagta tggaaaagtt ctcgtttcag gaaggtaaaa cggcttagga
     2461 atcgagttag atgaggatgc ctcgcacctc tcgtgcctcc tgcataccgt taaggaacag
     2521 ggttaaggtg caggctgctc cgaactctgt tgcggtcgga taatgttatt ttttgtgttt
     2581 caggcagcct gaaatatctg tatatttttg ttttaaatag attttaaaga ttgataactg
     2641 ttcttgacga tttttcaaga aaggagtaaa gtgacttatt atcaatgaca agcaacgcgc
     2701 gaagtgacaa ggaaaactat ctacttaaat tctaaggagg cttcgaatat cataaaccaa
     2761 tcagaaacat agagataaaa attatgtaca aatataatcc tcttatacaa tttattgcac
     2821 agttgattat gtcttatgga gcaagcgtag ggtgggcact tgctgcccca cgcgtttcat
     2881 atttcaaggc agcctgaaac tgtgtgggca taatgcctac cctacatccc aaaaaaacaa
     2941 gcgcagcctg cgtgtgtagg gtgcgaactt tcggcaggca gacacgcggt tttatagttt
     3001 caagctgagt tgggatgctt aagataaagt acaaaacctt aaaaaataag ggggctgtac
     3061 tagattagcc ctaaattcca caccaatccc gcaaaatttt tagctgtcgg gacggtgtgc
     3121 cgaagttaaa ccgaaatttg cattctttca agaacagcgg gaaagattta cgatcaattt
     3181 cgttgtattt gcgcaaggcg cgtttcgcct gattccaaaa gttttcaatg ccgttaatgt
     3241 ggttctgacg gtctgcaaac tccttagaat ggttgatgcg gtgatggata aaaccgctta
     3301 cgtgcagctt gtcatagctg ctcagactat cggtataaac aatactgtcc ggcatgattt
     3361 tccttttgat gacagggagt aacgtttcag acctggcatt atctacaaca acggtataga
     3421 cccgtccgtt gcgtttcaga atgccgaaga caaccacttt tcctgccgca ccgcgaccgc
     3481 gtctgccttt acgccgtccg ccgaaatagc tttcgtccaa ctcgacagag ccctcaaaaa
     3541 cctcatcggc agccaaggcc ggataatggc tgatgaccat acggattgtg cggtagaaca
     3601 gaatagcgga gtcgggctgg atgcccaaaa tatcggcagc tgaacgggcg gtaacttcaa
     3661 gtacaaaaaa gcggagcagt tctttctgta cttttttctt taatttgcag tgtgttgtct
     3721 tcatatttcg agggtaacat atc
//
LOCUS       DAWKOX010000178         3740 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.178, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000178 DAWKOX010000000
VERSION     DAWKOX010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3740
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.178"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..201)
                     /locus_tag="WJK78_001811"
     CDS             complement(<1..201)
                     /locus_tag="WJK78_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ7598691.1"
                     /translation="MRKSRLSQYKQNKLIELFVAGVTARTAAELVGVNKNTAAYYFHR
                     LRLLIYQNSPHLEMFDGEVEADE"
     gene            461..1933
                     /gene="pyk"
                     /locus_tag="WJK78_001812"
     CDS             461..1933
                     /gene="pyk"
                     /locus_tag="WJK78_001812"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ7598692.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQAEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            2241..3641
                     /locus_tag="WJK78_001813"
     CDS             2241..3641
                     /locus_tag="WJK78_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ7598693.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVLPSIHYEADSATDFTGLPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNDRHSFGAGIIAQHTSAELRKYADWGIKSKAEILTAKPPKPNGVAEAAKIQAD
                     GHADVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADGAAAKAMWS
                     TMLAANGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFE
                     KEKTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMN
                     SLPDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARF
                     KNHADIIGLQYTYKFK"
BASE COUNT          973 a         1100 c          930 g          737 t
ORIGIN      
        1 ttcatctgct tctacttcgc catcaaacat ttctaaatgt gggctgtttt gataaataag
       61 taatcgtaaa cgatgaaaat aataggctgc ggtattttta ttaacgccta ctaactctgc
      121 tgccgttctt gcagttacac ctgcgacaaa tagctcaatg agtttatttt gtttatactg
      181 gcttagacga ctttttctca tagggataat tctaacttaa tttgaatttc cctagttatc
      241 taggacagcc ccaaaataaa tttagcctaa gtcataaaac cgtgtaattt tgcgccaaaa
      301 aaggcggttt gcaggtaaaa tatcaaacta ttaatttaaa tcatattttt acagaatatt
      361 ccgccgcgtt catcaaatgg acatcaaacc ggttccaaat ttctgtaatt ttgtaacaaa
      421 ataccgcaaa acacccgatt gagaccaaaa ggactttcat atgaaccaga caagccgcga
      481 tctgacccgc atcagccaca acactaaaat cgtcgccacc cttgggccgg gcagcaacaa
      541 cgtagaactg ttggaagata tgatccgcgt cggcggcctg aacgtcgtcc gcttcaactt
      601 cagccacggc acgcccgaat tccatcagga aaacgcccgc atcgtgcgcg aggcggcaaa
      661 acgcgccgga caggaaatcg ccatcattgc cgacctgcaa gggccgaaaa tccgcgtggg
      721 caaaatcgcc ggcggcggca ttgaattgaa caaaggcgaa acgctggtac tggatgccgc
      781 gctcgaaggc gaaggcacgc gcgaggcggt cggtttggac taccgcgacc tgcccgacga
      841 cgttgccgca ggcgacgtat tgtggctgga cgacggcctg ctgaccctga ccgtggaatc
      901 cgtcgaaggc agcaggatta tcacaagggt ggaaaacagc catgtcctga aaagcaacaa
      961 aggcatcaac aaacgcggcg gcgggctgtc cgcaggcgcg ttgaccgaaa aagacttccg
     1021 cgacctgaaa accgcgattg ccatcggttg cgactacctc gccatcagct ttgtgaaatc
     1081 tgccgaagat ttgcacatcg cgcgcgccaa agtcgaagaa gaaatgaagg gcagcactgc
     1141 cgtgcgcccc ggtttggttt ccaaaatcga acgcgtagaa gcgattgaaa accttgatga
     1201 aatcatcctc gccggcgacg gcattatggt tgcgcgcggc gacttggcgg tcgaagtcgg
     1261 acacgccgcc gtccccgccc tgcaaaaacg gatgatccgc cgcgcccgcg agttgcgccg
     1321 cttcagcatt acggcgacgc aaatgatgga atcgatgatt accaaccccg tgccgacccg
     1381 cgcggaagtc agcgatgtgg caaacgcggt attggacggt accgatgcgg tgatgtgttc
     1441 cgccgaaacc gccgtcggcg cgtatccgtt tgaaaccgtc agccaaatgg caattatctg
     1501 cgcggctgcg gaaaaagagc aggattcgct caacggcgtt gccgaacagg cggagtatcc
     1561 cgaagcggtc agcaccaacc tggcggttgc cggcggcgcg gtcagcgtgg cgcgcgcggt
     1621 tcacgccaaa gcgattgtcg ccctgaccga aagcggttcg accgcctttg aaatcagccg
     1681 ccacaacatc accctgccga ttttcgcgct gaccccgagc gtttccgccc aacgccgtat
     1741 ggcgatgtac cgcggcgtgc gcccgctgat tttggcaacc agtaccgacc acgacacggc
     1801 gttgaacgaa gtcgaaacca tgctggtgga acacaacatc ctgcattccg gcgaccagta
     1861 catcatcacc agcggttcgc aaatgcgcga atccggttcg accaacacac tggaagtgct
     1921 gcgcgtcaaa taatccgccc tgagtggaaa atgccgtctg aagccgatgc ccgaggcttc
     1981 agacggcatt ttttgcggcg gcgcggcggt tcgggcaaac tgaaaaaatt gtgcaaatcc
     2041 ggcaacatcg gataaaattg agtacctata ctaaagcgaa acaaggcatt tccgactgcc
     2101 ttttttatag tggattaaat ttaaaccagt acggcgttgc cttgccgtac tatctgtact
     2161 gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc actatattta tccaccgtcc
     2221 gcctttttac ggaaaccgaa atgacccctt ccgcactgaa aaaaaccgtc ctactgctcg
     2281 gcactgcctt tgccgccgca tccgcacaag cctccggcta ccacttcggc acacagtcgg
     2341 tcaacgcgca aagcacggca aatgccgccg ccgcagaagc cgccgacgca tcgaccatct
     2401 tctacaaccc tgccggcctg accaaactcg acagcagcca gatttccgtc aacgccaaca
     2461 tcgtgctgcc cagcattcat tatgaggcgg attccgccac cgactttacc gggcttcccg
     2521 tccaaggttc gaaaagcggc aaaatcacca aaaccacggt cgcgccccac atctacggcg
     2581 catacaaagt caacgacaat ctgaccgtgg gcttgggcgt gtacgtcccc ttcggctctg
     2641 ccaccgaata cgaaaaagat tccgtgttgc gccacaacat caacaaactc ggtctgacca
     2701 gcatcgccgt cgaacctgtc gccgcatgga aactcaacga ccgccattcc ttcggcgcag
     2761 gcatcatcgc ccaacatact tccgccgaac tgcgcaaata tgccgactgg gggattaaga
     2821 gtaaagcaga gatattgacg gcaaaaccgc ccaaacctaa cggtgtagcc gaagctgcaa
     2881 aaattcaggc cgacggacac gccgatgtca aaggcagcga ttggggcttc ggctaccaac
     2941 tggcgtggat gtgggacatc aacgaccgcg cgcgcgtggg cgtgaactac cgttccaaag
     3001 tctcgcacac gctcaaaggc gatgccgaat gggcggcaga cggcgcggcg gcgaaagcaa
     3061 tgtggagtac gatgcttgca gcaaacggct acacggcgaa tgaaaaagcc cgcgttaaaa
     3121 tcgttacgcc tgagtctttg tccgtacacg gtatgtacaa agtgtccgat aaagccgacc
     3181 tgttcggcga cgtaacttgg acgcgccaca gccgcttcga taaggcggaa ctggtttttg
     3241 aaaaagaaaa aaccatcgtc aacggcaaat ccgaccgcac caccatcacc cccaactggc
     3301 gcaacaccta caaagtcggc ttcggcggtt cttatcaaat cagcgaaccg ctgcaactgc
     3361 gcgccggcat cgcttttgac aaatcgcccg tccgcaacgc cgactaccgc atgaacagcc
     3421 tgcccgacgg caaccgcatc tggttctccg ccggcatgaa ataccatatc ggcaaaaacc
     3481 acgtcgtcga tgccgcctac acccacatcc acatcaacga caccagctac cgcacggcga
     3541 aggcaagcgg caacgatgtg gacagcaaag gcgcgtcttc cgcacgtttc aaaaaccacg
     3601 ccgacatcat cggcctgcaa tacacctaca aattcaaata aacggcccgc cgtttgattg
     3661 tagaaatgcc gtctgaaaca gatttccgtt tcagacggca ttgttttagg cgcgatttat
     3721 agtggattaa caaaaatcag
//
LOCUS       DAWKOX010000179         3622 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.179, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000179 DAWKOX010000000
VERSION     DAWKOX010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.179"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            106..1248
                     /locus_tag="WJK78_001814"
     CDS             106..1248
                     /locus_tag="WJK78_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEZ7598694.1"
                     /translation="MQKWQTELYSTPLWLCLTPKSTVKVLLLITVMVTLLLTEVRLNV
                     LSTFMSKGLYDSMQDLNASAFWMFAAMNAGVVLIRAFNNVVNDFLDQGLAIKWSEQLN
                     EVLTTRWLADKNYYRLQMRRHAPDNIDQRIQQDAQDFIASTIEFVRGMVNSVVTSLEF
                     AVVLWGLAGILTVFGFDIPRGIVWLVFIFVILATFIAMWIGNPLIRYNYENEKLNGDY
                     RYSLIRVRDHAESVAFYNGEQHEHGRLSDRFKAIIRNRWRIARQSVCLSGFNDMFTNG
                     IKLFPIILQAPRLFAGQIKIGDIQQTVQAFARLQNALSFFRMFYNKFTAYRARLERLY
                     GFLLSTEEQHSARQPEISEVSDGIALECKAAAAFARIGGSFCTAEA"
     gene            complement(1358..1567)
                     /locus_tag="WJK78_001815"
     CDS             complement(1358..1567)
                     /locus_tag="WJK78_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598695.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(1564..1860)
                     /locus_tag="WJK78_001816"
     CDS             complement(1564..1860)
                     /locus_tag="WJK78_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HEZ7598696.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            complement(1839..2444)
                     /locus_tag="WJK78_001817"
     CDS             complement(1839..2444)
                     /locus_tag="WJK78_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598697.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            2524..2811
                     /locus_tag="WJK78_001818"
     CDS             2524..2811
                     /locus_tag="WJK78_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEZ7598698.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            2783..3085
                     /locus_tag="WJK78_001819"
     CDS             2783..3085
                     /locus_tag="WJK78_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEZ7598699.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIAEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
BASE COUNT          736 a          975 c          989 g          922 t
ORIGIN      
        1 attaacacgc aatgtaccct gaccggcaaa acttccccaa acttcatcaa aaaatcaact
       61 gtacccgtct ttttcagacg gcattgatac cgtaagaaat ttcccatgca gaaatggcaa
      121 accgagcttt attccacacc gctttggctt tgcctgacac cgaaaagcac ggtcaaagtc
      181 ttgctgctga ttacggtaat ggttacgctg ctgttgaccg aagtacggct gaatgtgttg
      241 agtaccttta tgtccaaagg actttacgac tcgatgcagg atttgaacgc ctccgcgttt
      301 tggatgtttg ccgcgatgaa cgcgggcgtg gtgctgatac gggcgtttaa caatgtcgtc
      361 aacgacttcc tcgatcaagg cttggcgatt aaatggtcgg agcagctcaa tgaagtgctg
      421 acgacgcgct ggcttgccga caaaaactac taccgcctgc aaatgcgccg ccacgcgccg
      481 gacaacatcg accaacgtat ccaacaggac gcgcaggatt tcatcgcttc gaccatcgaa
      541 tttgtacgcg gcatggtcaa ttcggtcgtt acctctttgg aatttgccgt tgttttgtgg
      601 ggcttggctg gcatcctgac cgtgttcggc ttcgacattc cgcgcggcat tgtttggctc
      661 gtctttattt ttgtgatttt ggcgaccttt atcgcgatgt ggataggcaa ccccttgatt
      721 cgttacaact atgaaaacga aaaactcaac ggcgactacc gttattccct catccgcgta
      781 cgcgaccacg ccgaaagcgt agcgttttac aacggcgaac aacacgaaca cggccggctt
      841 tccgaccgct ttaaagccat tatccgcaac cgttggcgca tcgcgcggca aagcgtctgc
      901 ttaagcggct ttaacgatat gttcaccaac ggcatcaaac tcttccccat tattttgcaa
      961 gcgccgcgcc tgtttgccgg acaaatcaaa atcggcgaca tccagcagac cgtccaagcc
     1021 tttgcgcgac tgcaaaacgc gctatctttt ttccggatgt tctacaacaa attcaccgcc
     1081 taccgcgccc gattggagcg tctgtacggc tttttgctga gtaccgaaga acaacacagc
     1141 gcgcggcaac ccgagattag cgaagtttca gacggcattg cactggaatg taaggcggcg
     1201 gcagcttttg cacgaattgg cggcagcttt tgcaccgccg aagcgtagga aattgtatta
     1261 gcttttgcac aaatttatcc ccgtttaatg gtctgttaaa cggggattat cttatgcctt
     1321 taaaagtagt acgctacttg cggtcagaac ttataaatca ggtggtcgtc gtagcttgaa
     1381 ttgctgttga tgtgctgctc acagtcaagg tttggctgcc tgcaaaacgc tcccatccgg
     1441 tcaggcgcag ttctgccacg aggtcaagat aagtaggcag ttcgctgcgg gtgccggaga
     1501 agaagacaaa tggcggccgc accattgcca tcaggcgcag aaactctacc atgccgaagt
     1561 agttcatcgc gtcccctttt ccccggcggc gcggctttgg ttgaaccgcg cgtcgtgctg
     1621 cctgcctttc agttcgctga tatacgcctg ccggcagtgt tggcggtcga aaaatacgcc
     1681 gttgatcagg gtgtataaaa ccttccagcg ggttttgggc ttttgggcga gccgcgcgcc
     1741 gcgataggtg cggcttgaga gggtttcgtc cgccgcgccg ccggttaggg cgttgaacag
     1801 ttggtcgatg gctaccaaca ggtggtaaac gtattttttc agccgatgtt tagcgtccat
     1861 tcttcgattt ccttttccag cgcgtccaat cctggcgcgg tttcgatggt gttcaatttg
     1921 tcttcgagct gctgccgctt tccgataatc gcgccggcgg caacggccag gcgggcggat
     1981 ttttcgacaa ctttttcaat caaaacgtcc aattccacgc cccttgcggc ggcgatttgc
     2041 gccagcatcg gggtcggggc gttgttgtcc gcctgccgcg cgagggcttc tttttcctgc
     2101 ctgtaaaagc tgtcgatttc cacttgggga tagcccgcca agaggctgtt tttgagttcg
     2161 tccgcctttg ccgcgaggcg gaatgccgtg gcggtttttt gttcggcgaa acgggcggcg
     2221 gcagcggctt cgccgatttc ccatttcttg ccgtcccatt cgtggtattc ggacgggcgc
     2281 ggcggggtta aaacggggcg gccgtcggaa tctgcggcaa tctgcccgcc ctgcgcctgt
     2341 cctgccaaaa gggcggcgta ttcttcggcg cggacggcaa ccgcgccttc ggggatgctg
     2401 cccaaggtgt cgtcgtaaaa gccgtttttg aaatagatgg tcatttcggg gtttcctttt
     2461 ttgtatttac attttggttt tttgccgctt ataatgtaac gacaaaatac gctgcaagct
     2521 gcaatgaaga ttgaatttga ctccgaaaaa aatcaacgca atatcgaaga gcggaatttg
     2581 ccctttgaat cagtcgggca aatacgctgg acaacggccg ttattgtgcc cgatgtctgc
     2641 tttgattacc ccgaaccgcg ttatgttgcc gctgcttatc taggcgatac gcaacgcctg
     2701 cacattgtct gttttacgcc gataaaagac ggcatccgtg tcatcagttt tcgcaaagcg
     2761 aataaaagag aggttaaaaa atatgcaacg tcaatcctta acaaacgctg acggcgaagt
     2821 gcgggaactt gccgccgaag attttgcgct tgcccgcccc attgccgaag ccctgcccga
     2881 agacttggca caggtgcttt tttcccatca aaaacaattg gaagaaaagg gcgtaatgca
     2941 aaaacgaaac acaggcaaaa ccccgaaaca actcgttacc atacgcctgt ccgccgatgt
     3001 ggtcgaaaaa ttccgcgccg gcggcaaggg ctggcagacg cgcatcaacg aggttttgcg
     3061 ccaatatgtc gcccaattga aataacgggg gcggccgctg cttatcgggc gcgcccgact
     3121 atcctttccc gcgcggtttc ggccgtgcgg ttttttgttg ccggtgccgt ccgaaggggg
     3181 cagcggcttt ttgcgcggtc attcccgcct ttcgttattc ccgccacttt ccgtcattcc
     3241 cgcgaaggcg ggaatcccga acgccacttt ccgtcattcc cgcgcaggcg ggaatccagt
     3301 ccgttcggtt tcagccgttt ccgatagatt cctgccgcgt ttggggtctg gattcccgcc
     3361 tgcgcgggaa tgacggcggc gggggtttct gttttttccg atagattcct gttgcgtcgg
     3421 ggtctggatt cccgctttcg cgggaatgac ggcggcgggg gtttctgttt tttccgatag
     3481 attcctgccg cgtttggggt ctggattccc gctttcgcgg gaatgacggc ggcgggggtt
     3541 tctgtttttt ccgataaatt cctgccgcgt ttgcggtctg gattcccgcc tgcgcgggaa
     3601 tgacggtggc ggggggtcgg tt
//
LOCUS       DAWKOX010000180         3598 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.180, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000180 DAWKOX010000000
VERSION     DAWKOX010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3598
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.180"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..413)
                     /locus_tag="WJK78_001820"
     CDS             complement(<1..413)
                     /locus_tag="WJK78_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEZ7598700.1"
                     /translation="MMHTPSPHNEFIRAIKESSPILIGLLPWALILGMQGGQKGMSWL
                     EMLLMTGMNFAGGSEFATVNLWAEPLPILLIATVTFMINSRHILMGAALALHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKATGLPAFNMP"
     gene            555..1007
                     /gene="dut"
                     /locus_tag="WJK78_001821"
     CDS             555..1007
                     /gene="dut"
                     /locus_tag="WJK78_001821"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ7598701.1"
                     /translation="MNIEVEMKVLDERMADFIPTYATAGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFAVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            1084..2271
                     /gene="dapC"
                     /locus_tag="WJK78_001822"
     CDS             1084..2271
                     /gene="dapC"
                     /locus_tag="WJK78_001822"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ7598702.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTLNSDTEILPVLGSREA
                     LFSFVQTVLNPVSDGIKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            2434..3213
                     /gene="yaaA"
                     /locus_tag="WJK78_001823"
     CDS             2434..3213
                     /gene="yaaA"
                     /locus_tag="WJK78_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ7598703.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESEILMQQLRELALQ
                     QIAELMHVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKTLRAQLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3296..3386
                     /locus_tag="WJK78_001824"
     tRNA            3296..3386
                     /locus_tag="WJK78_001824"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3330..3332,aa:Ser,seq:tga)
     gene            3464..3553
                     /locus_tag="WJK78_001825"
     tRNA            3464..3553
                     /locus_tag="WJK78_001825"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3498..3500,aa:Ser,seq:cga)
BASE COUNT          920 a          853 c          881 g          944 t
ORIGIN      
        1 ggcatattga atgcgggtaa accggttgct ttccgttttt ggatttcgga gaatgccatc
       61 gcccagcttt catcacacat aaaaaacagt gcgggcacgg cttttttcag cggtatttct
      121 ttcaggtgca gggcaagtgc cgcccccatc aggatatgcc gcgaattaat cataaaggtt
      181 acggtggcga taagcagtat cggcagaggt tccgcccaca ggttgaccgt ggcaaactcg
      241 gagccgccgg cgaagttcat accggtcatc aacaacattt ccagccagct catgcctttt
      301 tgtccaccct gcataccgag tattaatgcc caaggcagaa gtccgataag tatgggcgaa
      361 ctttctttga tggcgcgtat aaattcgtta tgcggggaag gtgtgtgcat aatgttcgtc
      421 ttcataacgg gaagggcggg cattatacac tggcaacgga tttcaaaaca aaaccgattt
      481 gccgtgtttc agcgtaaaca cggcttgtgt ataatctccc atctttgaaa ccggccgtat
      541 gcaggagcaa gacgatgaat attgaagtag aaatgaaagt gttggacgag aggatggcgg
      601 attttatccc tacctatgcg acagcgggtt ctgccggttt ggacttgcgc gcctgtttgg
      661 atgaggaagt cgtcttgcag ccgggggaaa cgtttcttgt gccgacaggt ttggcaattt
      721 atttggccaa tccttcatat gccgccgttt tgctgccccg ttccggcttg gggcataaac
      781 acggcattgt tttgggcaat ttggtcggtt tgattgactc cgattatcaa ggggaattga
      841 aggtgtcgtt atggaacaga agcagcgaac cgtttgccgt caagccgttt gagcgtatcg
      901 cgcagatggt tatcgttcca atcgtgcagg cgcgtttcaa acgtgtcgaa gaatttgtcg
      961 gaagcagccg tggagaaggc ggtttcggca gtacgggttt gcattgaata taaaatgccg
     1021 tctgatgggt gccgtcaggt tcagacggca tatcttccga tataccgaca accggagaac
     1081 attatgaata ccttactcaa ccaactcaaa ccctatccct ttgcccgact gcgtgaagcg
     1141 atgcagggca tttccgcccc cgaaggtctg gaagccgtcc cactgcatat cggcgaaccg
     1201 aaacatccaa caccgaaagt cattacagat gcgctgaccg cctcattgca cgagttggaa
     1261 aaatatccgc tgacggccgg tttgcctgaa ctgcgtcagg cgtgtgcgaa ctggttaaaa
     1321 cgccgttatg atgggttgac gctgaattcc gacaccgaaa ttctgccggt tttgggcagt
     1381 agggaggcgt tgttttcttt tgtccaaacc gtgttgaacc ctgtttcaga cggcatcaaa
     1441 cccgtaatcg tcagcccgaa tcccttttat cagatttatg aaggtgcgac acttttgggc
     1501 ggcggtgaaa tccattttgc caattgcccc gcgccgtctt tcaaccccga ttggcgtagt
     1561 atttccgaag aggtttggaa acgcaccaaa ctggtgttcg tctgctcgcc caacaacccc
     1621 agcggcagcg tgctggattt ggatggatgg aaagaagttt ttgatttaca ggataaatat
     1681 ggtttcatta ttgcctcgga tgaatgctat tccgaaatct atttcgacgg caacaaacct
     1741 ttaggctgcc tgcaggccgc tgcacagttg ggtcgaagca ggcaaaaact gcttatgttc
     1801 accagtttgt ccaagcgttc caacgttccg ggcctgcgtt ccggttttgt cgccggcgat
     1861 gccgaactgc ttaaaaactt tctgctttac agaacctatc acggcagtgc aatgagcatt
     1921 cccgtgcagc gcgcaagcat tgccgcttgg gatgacgaac agcacgttat cgacaaccgc
     1981 cgcctgtatc aggaaaaatt tgagcgcgtt attcccattt tgcaacaggt atttgatgtt
     2041 aaattaccag atgcctcgtt ttacatttgg ttgaaagtcc ccgatggcga cgatttggca
     2101 tttgcacgca atttatggca aaaagccgct atccaagtat tgcctggacg ttttttggca
     2161 cgggataccg aacagggcaa tcccggggaa ggttatgtgc gtattgcttt ggttgccgat
     2221 gtcgcaactt gtgtcaaagc tgcggaaacc attgtttccc tatatcggta aagaataaaa
     2281 aataccgtct gaacttttgt tcagacggca tttttcaata ttttacggtt gaatttgcta
     2341 taacggtatt tacttcactt ttaatctaat cggcttgccc gcaaacacgt ttaaacttaa
     2401 aatccccgtg tttgacacaa taccgagcag attatgtttt ttgtcctttc ccctgcgaaa
     2461 aaccttaacg aaaaagaccc tgcccctgtc agcgagttta cccaacccga cctgctggca
     2521 gagtccgaaa ttctaatgca gcagctgcgc gagcttgcgt tgcaacagat tgccgaactg
     2581 atgcacgttt ccgacaaaat tgccctctta aacgcgcagc gcaatgcaga atggcacacg
     2641 ccgtttacgc cggaaaacgc caaacaggcg gtctttatgt tcaacggcga tgtttacgaa
     2701 ggtatggatg caaacacatt ggatattgga cagatacgct atctgcaaaa ccatgtccgc
     2761 ctgctgtccg gtctatacgg tcttcttcgc ccgttagacc tgatacagcc ctatcgtttg
     2821 gaaatgggga cggcatttgc caatttgcgc ggcaagaatt tgtatgagtt ttggggcgac
     2881 atcattacca accttttaaa tgacacgctt gcccaagcag gcagcaatac gcttgtcaac
     2941 cttgcctcac aggaatattt caagtccgtc aacacgaaaa cacttcgggc gcagctgatt
     3001 accccgatat ttaaagacga aaaaaacggt aaatataaaa tcatcagttt ctatgccaag
     3061 cgtgcgcgcg gattaatggt gcgctatgcg gcagaacatc atattaccga ccctgaaatg
     3121 ctgaaaaatt ttaattacga aggctacgca ttcaatgacg cggcttcaaa tgaaagcgaa
     3181 tgggttttta tgcgttcgga acaaataaag tgaaaacaat aaattaagta ttttccgaaa
     3241 aaagtgcttg gcaaaatgta taaacttcat tattattctt cttcttcaag aagacggaag
     3301 cgtggcagag cggtttaatg caacggtctt gaaaaccgtc gagggttgat agccctccgt
     3361 gagttcgaat ctcaccgctt ccgccaatcc ttggggtcaa aaaccaaata aaaatgaagt
     3421 agcataaagc atcggcattt ttatttggtt ttacttcatt atcggaaacg tggcagagag
     3481 gctgaatgca gcggactcga aatccgctga gggtgcaaat cctccgtggg ttcgaatccc
     3541 accgtttccg ccacaaaaca aaaccgccct gattcggggc ggttcttttt tgttcaag
//
LOCUS       DAWKOX010000181         3543 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.181, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000181 DAWKOX010000000
VERSION     DAWKOX010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3543
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.181"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(214..1278)
                     /locus_tag="WJK78_001826"
     CDS             complement(214..1278)
                     /locus_tag="WJK78_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ7598704.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKAKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGD
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAGH
                     QCVANRFTINHTADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="WJK78_001827"
     CDS             complement(1279..2037)
                     /locus_tag="WJK78_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ7598705.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="WJK78_001828"
     tRNA            complement(2112..2187)
                     /locus_tag="WJK78_001828"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..3377)
                     /locus_tag="WJK78_001829"
                     /pseudo
     CDS             complement(2241..3377)
                     /locus_tag="WJK78_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            complement(3322..>3543)
                     /locus_tag="WJK78_001830"
     CDS             complement(3322..>3543)
                     /locus_tag="WJK78_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7598706.1"
                     /translation="DSIVYTDSLSSCDKLDVSSFIHYRINHSKEFADRQNHINGIENF
                     WNQAKRVLRKYSGLARTFPRIGSATGCAD"
BASE COUNT          801 a          865 c          936 g          941 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgat gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta tttttaagga
      121 tggattcggg gtgtttcttt ccaatgaacg aatataattt ggcggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc agtttatatt gcatccaata atttgtcggc
      241 ggtatggttg atggtaaaac ggttggcgac gcattgatgt cctgccgttg ccagtgcgtt
      301 tttcgtttca gggttcaaga cgaggcgttc gatttcgtcc gccaaagatt caggtgtcag
      361 cctgtccagc agaatccccg attgatgatg ttcgataatt tccttttgcg cccccaaagt
      421 attggaaatc accgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggcgg taaaacgaag caagtttttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatccggat gtccgtcccc tgccaatttg agcctgattt gaggatattt
      661 ccgatgcagt atcacacagg cttcaatcag gttttccaat cctttttctg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaaacg
      781 gccggtatcg ataccgttat gaacaatccg gtattttgct ttaaagggat tgtcggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tctgtgtttt tctgtatcag
      901 gcggtggtaa aaatcggttt tgttggcgac gacattatgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggtttttcc ggataaagcg ggtaagcgcg cagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgcgttg tgaaaacgga agaaacttcg gaaaaacgtc tgtgcatcaa
     1141 ctcattattt ttattgacgg cggtaaacat cgtgcaaccc cgaagcccca atgcttttga
     1201 aacatcatag acatactgtt cgcccccgcc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccagatttg tacagataat atagtttgac
     1321 atatttaatc atcgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 gagaaaccct ttgttcagga tataaatttt gaaaaaaccc caaatcgggc ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat ttctcggctg agatggaagt
     1501 gtatttgttg aatttgttga aatattgttc ccagttgtcg tatgtgtaat ggtacataaa
     1561 atgcttcaga cggcgtttgg ggtagggggt ttgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgtct tttttcggca tcagacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ttcgacaaaa taggcggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccgttcaaa tgccgtctga agacttttgc acccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tggtcgtcaa taacgataac ttctttatcg aaacggcaac tttcaataca
     1981 ttcccgaatg tggtttgctt cgtttttggc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagcg
     2221 gtgggattga caaacttatt tcatccgatg attaagacgc agttgcttcc tccgaaggca
     2281 aacgacgagc tggcggtaat gcgtttttcg gtttcccagc ggctgccgct gccggtcagg
     2341 ttgatggcgg gaaggttcgg atcgttctgc ccgtcccaaa gctggggcgg aagttttcct
     2401 tcgggattgc tttgccggtc ggcaatgccc cacgcgaacg cggcttcgat tgcgcccgcc
     2461 gcacccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcacggct ttccatactg tcgttgtggt gcgtcccggt gccgtgcagg
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttgcgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattatc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgagaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagcccg aaaaagatgc cgatattggc ggcggtggtg
     3061 tgcggcatca tacgcacata ggtgttggca ctgaagttgc gcgacgtgcc ggtcagcaac
     3121 aattcgccca catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atccgtccgt cggtaatgct ttcgtccccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatc ctcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccactat attttcgcaa gacgcgtttt gcctgattcc aaaagttctc
     3421 aatgccgtta atgtggtttt gacggtctgc aaattccttg gaatggttga tgcggtaatg
     3481 gataaaactg ctcacgtcca acttgtcgca gctgctcaga ctatcggtat aaacaatact
     3541 gtc
//
LOCUS       DAWKOX010000182         3511 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.182, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000182 DAWKOX010000000
VERSION     DAWKOX010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.182"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            99..1214
                     /gene="lst"
                     /locus_tag="WJK78_001831"
     CDS             99..1214
                     /gene="lst"
                     /locus_tag="WJK78_001831"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HEZ7598707.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKAMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTGNLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            complement(1378..1836)
                     /locus_tag="WJK78_001832"
     CDS             complement(1378..1836)
                     /locus_tag="WJK78_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ7598708.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            1955..2776
                     /locus_tag="WJK78_001833"
     CDS             1955..2776
                     /locus_tag="WJK78_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ7598709.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQVLADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGDTEFSNVRFKGDDERAAGVYESVEFIRPEDIAETSLW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            complement(2827..3273)
                     /gene="yciA"
                     /locus_tag="WJK78_001834"
     CDS             complement(2827..3273)
                     /gene="yciA"
                     /locus_tag="WJK78_001834"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ7598710.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKIEVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLSGLLPTP"
BASE COUNT          830 a          761 c         1015 g          905 t
ORIGIN      
        1 tattcggtaa ctgtcggaat atctgctaaa attccgcatt tttccgcccg ggacactcgg
       61 ggcgtatgtt taatttgtcg gaatggagtt ttagggatat gggcttgaaa aaggcttgtt
      121 tgaccgtgtt gtgtctgatt gttttttgtt tcgggatatt ttatacattt gaccgggtaa
      181 atcaggggga aaggaatgcg gtttccctgc tgaaggacaa actcttcaat gaagaggggg
      241 aaccggtcaa tctgattttc tgctatacca tattgcagat gaaggtggcg gaaaggatta
      301 tggcgcagca tccgggggag cggttttatg tggtgctgat gtctgaaaac aggaatgaaa
      361 aatacgatta ttatttcaat cagataaagg ataaggcgga gcgggcgtat tttttccacc
      421 tgccctacgg tttgaacaaa tcgtttaatt tcattccgac gatggcggag ctgaaggtga
      481 aggcaatgct gctgccgaag gtcaagcgga tttatttggc aagtttggaa aaagtcagca
      541 ttgccgcctt tttgagcact tacccggatg cggaaatcaa aacctttgac gacgggacag
      601 gcaatttaat tcaaagcagc agctatttgg gcgatgagtt ttctgtaaac gggacgatca
      661 agcggaattt tgcccggatg atgatcggag attggagtat cgccaaaacc cgtaatgctt
      721 ccgacgagca ttacacgata ttcaagggtt tgaaaaacat tatggacgac ggccgccgca
      781 agatgactta cctgccgctg ttcgatgcgt ccgaactgaa agcgggggat gaaacgggcg
      841 gcacggtgcg gatacttttg ggttcgcccg acaaggagat gaaggaaatt tcggaaaagg
      901 cggcaaaaaa cttcaacata caatatgtcg caccgcaccc ccgccaaacc tacgggcttt
      961 ccggcgtaac cacattaaat tcgccctatg tcatcgaaga ctatattttg cgcgagatta
     1021 agaaaaaccc gcatacgagg tatgaaattt ataccttttt cagcggcgcg gcgttgacga
     1081 tgaaggattt tcccaatgtg cacgtttacg cattgaaacc ggcttccctt ccggaagatt
     1141 attggctcaa gccggtgtat gccctgttta cccaatccgg catcccgatt ttgacatttg
     1201 acgataaaga ttaatcgcat agcaaatcaa aatagaaaat ggcggagtaa gtaaggcaaa
     1261 aatcaggata tggcgtattt tttgaattga cgataatttc tgattgcttt gcgtgtgctg
     1321 aaatggcaaa gaaaatgccg tctgaaggct tcagacggca ttgttctgtt tcggatgtta
     1381 ttcgggtgcg cggaaactgt cgtggcagga tttgcagctt gcgccggttt cgccgtaggc
     1441 ggctttgatt tcatccagtt tgccggtttg tgctgcggca ttgagttttt cgacggcggc
     1501 ggcgaatttt gttttttcgg cttcaaattt tgcaccatcc gaccaaacgg ctggcagggc
     1561 gcggccgttg ccttgcggat cggactcaaa aagtgtgaac ggtttcttgc tgctttcggc
     1621 aaacgccgcg gcagcctgtt tgaatttttc gacatcgtaa ggctcttcgc ctttgaccat
     1681 tttgcccata cgcgagaagt cgggcatcat agatttgaac gcggcggtgc ggttttcgga
     1741 aatttcgcct ttgggttggg aaggtattcc gctgcctccg caggcggaaa ggagcagtgt
     1801 gatggcggca gcagcaaggc tgatttgggt tttcatattg aatgtgtcct gtcgtggtgg
     1861 tatggttgtt gtcattttca gtcggcgcga tgccgtctga agggtgttat gatacctgaa
     1921 acaggtttgg gaaacgagaa agaaaggaaa aacaatggct gttttaatta ccggtgcttc
     1981 ggcaggattc ggcgaagcga tgtgccgcgc gtttgtcggg gctggatacc gcgttatcgg
     2041 tgcggcgcgc cgtgcggaca ggcttcaggt tttggcggat gaattgggtg ctttgtttta
     2101 ccctttggaa atggacgtgt cgcgacgcga gtcggtggaa aatgccttaa acggcatccc
     2161 cgatgaattt tccgacatcg actgcctcat caacaatgcc gggctggctt tgggtttgga
     2221 cacggcggac aaggcggatt ttgaagattg ggaaacaatg attcaaacca atgttttggg
     2281 tttgacgttc ctgacgcgca agattttgcc gcaaatggtg gaacgcggcg gcggttatgt
     2341 gatgaatttg ggttcgattg cgggtaatta tgcttatgcc ggcagcaacg tttacggggc
     2401 gaccaaggcg tttgtgcgcc agttcagcct gaatttgcgc gcggagttgg cggataaaaa
     2461 tatccgcgtt accaatatcg agccgggttt gtgcggcgat acggagtttt ccaacgtgcg
     2521 cttcaaaggc gatgacgaga gggcggcggg cgtgtatgag agtgtggaat ttatccgccc
     2581 cgaagatatt gcggaaacct cattgtggct gtaccgccgg ccggcgcata tgaatgtgaa
     2641 cacgattgaa attatgcccg tggcgcagac ttttgcagga atgaaagtga taaaaaaagc
     2701 cgtgcccgaa gtgcgggaag actttgaaaa acagagtatg tcgctgtttt cccgcatcag
     2761 gtcctggttc aaatgatgcg gaatgccgtc tgaagacagt ttcagacggc atttttacgg
     2821 gtatttttac ggagtaggca ataagcccga caatttgggg ttgccttctt tcggaatcgg
     2881 gcgcggattg ccttccgcat cgatggcaac ataagtgaac accgcctcgg ttacgaggta
     2941 gcggtcttcg gtaacgcaat cgttcatcaa agttttcacc cagacttcga ttttaagctg
     3001 gagggaagta ttgcccacgc ggacgcaatg cccgtagcag cagacgacgt tgccgacctt
     3061 gaccgggcgg ataaagttca tttcctgaac ggcgacggta acgatgcgtc cccgcgcgat
     3121 ttccgccgcc aatatgccgc cgcccaaatc catctgcgac ataatccagc cgccgaaaat
     3181 gtcttggttg ggattggtat cgcgcggcat agcgacggta cgcaggagca gttcgccttg
     3241 agggcgttgg cggttgcctt cttcgtgctg cataaagttt ccttgtttta ttgaaatata
     3301 aatcggacct gcacccctgc ctgaaacggg aagtcgggaa gtgcgtagtt taacccattt
     3361 gagacataca agggcgggcg tagggcagat tcgcaaggcg cattgtaggg cggatgcgta
     3421 gggcggggcc gtagggtggg cttcagccca ccaatcccgc caaatcctac cctaagcaac
     3481 tgaaccgtca ttcccgcgca ggcgggaatc t
//
LOCUS       DAWKOX010000183         3427 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.183, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000183 DAWKOX010000000
VERSION     DAWKOX010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.183"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            43..711
                     /locus_tag="WJK78_001835"
     CDS             43..711
                     /locus_tag="WJK78_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ7598711.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTPNNKCDSGKKGQGMLAFGDKNGNK
                     RYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTADRVVWTFNQNGTFGYST
                     NQDLTNTSKFVYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTV
                     CQYK"
     gene            741..1361
                     /gene="pilV"
                     /locus_tag="WJK78_001836"
     CDS             741..1361
                     /gene="pilV"
                     /locus_tag="WJK78_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ7598712.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNYTLPHTLSAVDGDFA
                     IDAMKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDN
                     KANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE"
     gene            1358..2302
                     /locus_tag="WJK78_001837"
     CDS             1358..2302
                     /locus_tag="WJK78_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ7598713.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGLLSMIVLMAVGSSYFT
                     SRKLNDAANERLAAQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKDVVSNVAQKNPL
                     FSLKKRSSTNKLIPITESLNIEYPGFTQRLNALIFQYGIDDVNASADTTVVSSCAAIS
                     KPGKQILNLEDVKKELKIVSQDKERNGNIARQRHVVNAYAVGRISDAEGLFRFQLNDD
                     GQWGNPQLLVKKINKMDIRYIYVSNCPEDDDAGKEETFKYTDKFDSSTNAVTPAGVEV
                     LLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2281..2874
                     /locus_tag="WJK78_001838"
     CDS             2281..2874
                     /locus_tag="WJK78_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ7598714.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRFCPANSTDLCIDKKGMEYKKGTRSVSKPPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2879..3352
                     /locus_tag="WJK78_001839"
     CDS             2879..3352
                     /locus_tag="WJK78_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ7598715.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAKAHLETLSSDVGCEAFSNRKK"
BASE COUNT          989 a          679 c          857 g          902 t
ORIGIN      
        1 aatttaatcc actatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacgccca acaataaatg tgactccggc
      301 aagaaggggc agggaatgtt ggctttcggc gacaaaaacg gcaataagag atatgacaat
      361 gatacggcgg atgttcttct ccgcagtgtg gtattgaatg atgatatcaa tgataagcgg
      421 attaattatg ccttcaacca tatcgctttc ggtcagactc agccgaccgc tgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttattcta ccaatcagga tctcacgaat
      541 acttccaaat ttgtttactc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattgacag cagcggcagg
      661 gttgaggttt gtcctagaaa cgataggcgt accgtatgcc aatataaatg attgttttag
      721 tcggtttggg aaataaaaaa atgaagaata atgattgctt ccgcctgaaa aacccccagt
      781 ccggtatggc gctgatagaa gtcttggtcg ctatgctcgt tctgaccatc ggtattttgg
      841 cactattgtc tgttcagttg cggacagtcg cttccgtcag ggaggcggag acgcaaacca
      901 tcgtcagcca aatcacgcaa aacctgatgg agggaatgtt gatgaatccg accattgatt
      961 cggacagcaa caagaaaaac tataatcttt acatgggaaa ctatacacta ccgcatacac
     1021 tatcagctgt ggatggcgat tttgcgattg atgccatgaa aactaagacg cagttggcag
     1081 aggcacaatt gaagagattt agttatgagc tgaaaaatgc cttgccggat gcggcagcca
     1141 tccattacgc cgtctgcaag gattcgtcgg gtaacgcgcc gacattgtcc ggcaatgctt
     1201 tttcttcaaa ttgcgacaat aaggcaaacg gggatacttt aattaaagta ttgtgggtaa
     1261 atgattcggc aggggattcg gatatttccc gtacgaatct tgaggtgagc ggcgacaata
     1321 tcgtatatac ttatcaggca agggtcggag gtcgggaatg agacgtaaaa tgctaaacgt
     1381 accaaaaggc agttatgatg gtatgaaagg ttttaccatt attgaatttt tggttgcggg
     1441 cctgctcagt atgattgtcc tgatggcggt cggatcgagt tacttcacat cccggaaatt
     1501 aaatgatgcg gcaaacgagc gtcttgccgc acaacaggat ttgcggaatg cggcaacatt
     1561 gattgtccgc gatgcaagaa tggcggggag cttcggttgt ttcaatatgt ctgagcatac
     1621 cgaaaaggat gttgtttcca atgtggcgca aaaaaaccct cttttttcct taaaaaaaag
     1681 gagcagtaca aataaactta tccccataac ggaatcttta aatatcgaat atccgggttt
     1741 tacccagcgc cttaacgcat tgattttcca atacggaatc gatgatgtta atgcaagcgc
     1801 cgatactacc gtcgtcagca gctgtgccgc aatatcgaaa ccgggtaagc aaatccttaa
     1861 tttagaagat gtaaaaaaag aattgaagat tgtgagtcag gataaggagc gaaatggcaa
     1921 tatagcgcgt caaaggcatg tggtcaatgc ctatgcggtc ggcaggattt ctgatgcgga
     1981 gggtttattc cgttttcaat tgaatgatga tgggcagtgg ggcaatcctc agttgttggt
     2041 taaaaagatt aataaaatgg atatacggta tatttatgtt tccaactgtc ctgaagatga
     2101 cgatgccggc aaagaggaaa cattcaaata tacggataaa ttcgacagct ccacaaatgc
     2161 tgttacgccc gccggggtgg aggttttatt gagtagcggt actgatacca agattgccgc
     2221 ttcttcagac aatcatattt atgcttaccg tatcgatgcg acaatacgcg ggggaaatgt
     2281 atgcgcaaac agaacacttt gacgggaatc ccgacttctg acggacagag ggggtttgca
     2341 ctgtttatcg tgctgatggt gatgatcgtc gtggcttttt tggttgtaac tgccgcgcag
     2401 tcttacaata ccgagcagcg gatcagtgcc aacgaatcag acaggaaatt ggctttgtct
     2461 ttggccgagg cggctttgcg ggaaggcgaa cttcaggttt tggatttgga atatgatacg
     2521 gacagtaagg ttacatttag cgaaaactgt ggaaaaggtc tgtgtaccgc agtgaatgtg
     2581 cggacaaata atgataatga agaggctttt gacaatatcg tggtgcaagg caagcccacc
     2641 gttgaggcgg tgaagcgttt ttgccctgca aattctaccg acctgtgcat tgacaagaaa
     2701 gggatggaat ataagaaagg cacgagaagc gtcagcaaac caccgcgcta tattatcgaa
     2761 tatttgggcg tgaagaacgg agaaaatgtt tatcgggtta ctgccaaggc ttggggtaag
     2821 aatgccaata ccgtggtcgt ccttcaatct tatgtaagca ataatgatga gtaataaaat
     2881 ggaacaaaaa gggtttacat tgattgagat gatgatagtc gtcgcgatac tcggcatcat
     2941 cagcgtcatt gccatacctt cttatcaaag ttatattgaa aaaggctatc agtcccagct
     3001 ttatacggag atggtcggta tcaacaatat ttccaaacag tttattttga aaaatcccct
     3061 ggacgataat cagaccatca agagcaaact ggaaatattt gtctcaggct ataagatgaa
     3121 tccgaaaatt gccgaaaaat ataatgtttc ggtgcatttt gtcaataagg aaaaaccaag
     3181 ggcatacagc ttggtcggcg ttccaaagac ggggacgggt tatactttgt cggtatggat
     3241 gaacagcgtg ggcgacggat acaaatgccg tgatgccgct tctgccaaag cccatttgga
     3301 gaccttgtcc tcagatgtcg gctgtgaagc tttctctaat cgtaaaaaat agggctgttt
     3361 tgccgatgcc gtctgaaaat caatgttcag acggtatttt tatgggtata gtggattaac
     3421 aaaaatc
//
LOCUS       DAWKOX010000184         3293 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.184, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000184 DAWKOX010000000
VERSION     DAWKOX010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3293
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.184"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(61..1203)
                     /locus_tag="WJK78_001840"
     CDS             complement(61..1203)
                     /locus_tag="WJK78_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ7598716.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1252..1674)
                     /locus_tag="WJK78_001841"
     CDS             complement(1252..1674)
                     /locus_tag="WJK78_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598717.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1667..2476)
                     /locus_tag="WJK78_001842"
     CDS             complement(1667..2476)
                     /locus_tag="WJK78_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ7598718.1"
                     /translation="MIQDTRPLIRVVAGILLNRDGDYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPGQWTGEPQ
                     SREGQAWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEESGANVLMEAAQWQDRPEHADSVWMMVQTREQWRQAQEKGADVVVWRVCNDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2558..2935)
                     /locus_tag="WJK78_001843"
     CDS             complement(2558..2935)
                     /locus_tag="WJK78_001843"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ7598719.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3135..>3293)
                     /locus_tag="WJK78_001844"
     CDS             complement(3135..>3293)
                     /locus_tag="WJK78_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7598720.1"
                     /translation="GLIFLLSVLSVIGLYVGIRLRTKISPNFFKMLIFIVLLVLALKI
                     GHSGLIKL"
BASE COUNT          723 a          889 c          909 g          772 t
ORIGIN      
        1 ggccggatat taaaaaaagc cgtctgaaca tttttcagac ggcatttttg tacactttcc
       61 tcaacggttc gatccctgca ccatatcaat caggaacagg cggcaatcga ggttgccgtt
      121 ataaagcgga attttgcgtt ttggcgacag gcgcatgaat ttgggcattt cccgatctcc
      181 ggtaaacatt gccgccaacc agcctgcgta atatttcttc aaccacgtcc ccaactgcgg
      241 ataaagcgcc tgcaaggcgc ggacttcctc aaggcgcacg ccgtagggcg gattggacac
      301 cataatgccg cccacgccgt tcggacggac ggattgcgcg tcggcaacgc tgaaggaaac
      361 gatgtcgtcc accccggcac tgcgtgcgtt ggccaatgcc gtctgaatga tgcggcggtc
      421 gctgtcgctg cccgaaatcg gtgcaaaagc cggtttaacc tgcgcttcgg cacggcggcg
      481 caaatccgac cacagcgttt tatcgaaatt ttgcagtttt tcaaaaccga aacggcgcat
      541 catacccggc gcgcggcggg cggcaatcca agcggcttcg atagcaatcg tgccgctgcc
      601 gcaaaacggg tcttgaaacg gctgcgtgcc gtcgtagcct gccgagagca gcaatccggc
      661 ggcaaggttt tcgcgcagcg gggcttcgcc ggtatcgaga cggtagccgc gtttgaacag
      721 ggcttcgccc gaagtgtcga tgaagatttc gacattgcgt tcgtccaaaa aggcgtggat
      781 gcgaacatcg ggcgcggctt tgtccacgct cggacgtgcg tcgtaaatgt cgcggaaagc
      841 gtcgcagacg gcatctttga cggtcagtcc gacaaattgg atgctcttaa cgttggcacg
      901 ctttgcctcg actttgactt tgaacgtctg ctgtaaagta aaccaattaa accagttgat
      961 atttttggcg agtttgtaga tgtcgcgctc attgcggtat gtccctttgg tcaggcgcag
     1021 caggatacgg ctggcagtac gcgaatgcag gttggcggcg taaacctgtt ccaatccgcc
     1081 ccggcaggaa acgccgccgt caaacacttg tacatcggta cagccgaggc tttcgagttc
     1141 ttgagataaa acggtctcca agccgcgcgg gcaggtggcg aaaagtgtat ataaagtatt
     1201 cataacgtgt cctttccgga cggatgttcc ggcaatggcg gattgaaagg tttattcggc
     1261 ggtaaatgcc gtctgaaatg tccgactgcc gattgtaatg tccgccgtaa aatcgcgcct
     1321 gccttcgaca cagatgggca ggcggatgcg tactgcctgc caagtccccg acggttgccg
     1381 ctcgaacata tagcggttga aacccatatc catatttttc atactgaagc tgatgctgac
     1441 ctgttccgtg ccggcgggcg cgtgttcgat ataaatatca aacggttttt tggttgaaac
     1501 ggcggcggcg cggacgcggc ttccgtccgg cagcgtgcaa ccctcggtca aatcgcattg
     1561 cgccgccaca gcttgcggct gctgcgcctg ccaccattgc aacaaaacga gcttgacggc
     1621 ggcaaaggca atcagcagca gtgcggcaag cagtaattta cggtttttat tcatgattct
     1681 tccctattgt ttcatccctt accaccacgt gcgcccccaa tccgagccat agttttccat
     1741 aacgtgcaac cgtctgtccg tttgctgcaa gtacgagcgg cacggatacg ccctgccgca
     1801 gggcttctgc cgcctcttgt gcctgaacat cattgcacac gcgccacacg acaacatccg
     1861 cgcccttttc ctgcgcctgc cgccattgtt cgcgggtctg caccatcatc cacacgctgt
     1921 cggcgtgttc gggtctgtcc tgccattgcg ccgcctccat caaaacgttc gcaccgcttt
     1981 cctctgccga acccaaaggc aggacgcggt acgcgcccat actgttctcc ccgtgcaaac
     2041 ccgttttcag gctgccgtac aaacggcgcg ggacggacag cgaacgcaaa agcgcgccgt
     2101 tggcaggcag catgggggca acggtaaaat cacccgcctt ctgccacgac catgcctgtc
     2161 cttcgcgcga ttgcggttcg cccgtccatt ggccggggtt tacccatagg aatttcaggc
     2221 agacgcgggc gtgttcgtag gaatggattt tggtcagcca aggcgtggcg gcgaggatgc
     2281 ggatgccgag ttcttcttca aactcgcgtt gcaaggcttg gaagtcggtt tcgcccgctt
     2341 cgaccttgcc gccggcaaat tcccaatatc cggcataggg tttgccttcg gggcgcgagc
     2401 tgagcaggta gtcgccgtct cggttgagca ggatgccggc aacgacgcgg ataaggggtc
     2461 gggtgtcttg aatcatggcg ggtacgcggt tggtcggtcg gagtgcaaat gagggacgag
     2521 caatgccgtc aacgggtttg ccgcatttca gacggcatta tttttcggca acgacaaacg
     2581 ccaatacggt gtcttcttcg tcgctcatgc tgaggctgac gcggctgatg ccttgttcct
     2641 ccagccattt ggacagggcg gggccgtaga aaaattcggg cttgcccaat gcgtcatgcc
     2701 cgatgccgat gttgcggaag gaaaccgcgc cgcgtatgcc cgtgccgacg gctttggcga
     2761 aggcttcttt ggcggcaaag cgtttggcga ggtagttgac gggtttgccc gcttgcggaa
     2821 attcaagcag ctcttccgga gtgaggatgc gcccggcaaa cgcctgtccg aattttttgt
     2881 ttaagcggat gatgcgcttg agggaaacaa tgtctgtgcc gatgccgtaa atcatatttg
     2941 cgctccttcg cccttggttg cgggtagtga tgaatgtgat gatgaatgcc gtcaatttct
     3001 tggggcgtta aaatggcgtg aatatccact tttggggttt tgtcggtaac aattttcact
     3061 gtaacctttt gcatttgaaa ttctaaaaca tcgtgccaat tatttaataa ggagttaagg
     3121 catttaataa tgaattaaag tttgattaaa cccgaatgcc cgattttcag agccaatacc
     3181 aataaaacaa taaaaattaa cattttaaaa aaatttgggc taatcttagt ccttaaccga
     3241 attccaacat acaatccaat aacagacaat acggacagta aaaatattaa acc
//
LOCUS       DAWKOX010000185         3274 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.185, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000185 DAWKOX010000000
VERSION     DAWKOX010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.185"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(63..2237)
                     /locus_tag="WJK78_001845"
     CDS             complement(63..2237)
                     /locus_tag="WJK78_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7598721.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIITKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNNFNGGK
                     TVPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFTVGGDKERISMK
                     RQAPSYRETTQSNTNLAYTGKDLGFVEKLDANVYVLEKKRYSADDSGTGYAGNVKGPN
                     HTRITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSKFKISDKKPDPNNPGK
                     EIAKTDEEKAKDKIDMALVHSYKLSNPAKTDTGAYIEAIHEINGFTLTGGLRYDRFKV
                     KTHDGKTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIA
                     DGTKAERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYI
                     KNHGYELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAY
                     RFKNPNLEIGWRGRYVQKAVGSILVSGQKDRQGKLENVVRQGFGVNDVFANWKPLGKD
                     TLNVNLSVNNVFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          733 a          751 c          917 g          873 t
ORIGIN      
        1 aaattatcag aacagatgcc gtctgaaagg ctttcagacg gcattttttc gggatgtgcg
       61 ttttagaact tgtagttcac gcccaagcgt acatcacgtc ccacgcccgg cagggtattg
      121 gtccagcgtt ggctgtgcgg atagtagaac gtgttgaaca cgttgttaac cgaaagatta
      181 acattgagcg tgtctttgcc cagcggtttc cagttggcga agacatcgtt cacaccgaaa
      241 ccttggcgta caacgttttc cagtttgcct tggcggtctt tttgacctga caccaatatc
      301 gaacccacgg ctttttgaac atagcgtccg cgccagccga tttccagatt cgggtttttg
      361 aagcggtagg caagggaggc tgtccaagtg cggccgactt gtgcgccaaa ttcaggattc
      421 gcgctcaaca gcttgtcttt gtgcgtatcg taaaagcgcg gtttgctgtg gcttacgccg
      481 actttggcag tcaggccgcc ggtgcggtag gacgcgccca attcgtaacc gtggtttttg
      541 atgtaaccgg cattgacggc ttcacggacg gcggcagaga cgtggcggtt ttgcggattg
      601 gcaagcgcgt ctttgatggt ttgccagaag tagctgccgt tggcggcaaa cgtgccgtcg
      661 ttgtagttga agccgatttc ggtattgcgc gcgcgttcgg ctttcgtgcc gtcggcaatc
      721 gagatgatgc cgcgtttacc gtgggtttgc agcgcgtcat acaggcgcgg gctgcggctg
      781 gcgtagttgt ggctcgcgct gaagctccag tgttcgtgcg gctgccaaat cacaccgaaa
      841 ctcgggttaa ggttgctgct tgaaacagtt ttgccgtcat gggttttcac cttgaagcgg
      901 tcgtaacgca gcccgccggt cagggtaaag ccgttaattt cgtgaatggc ttcgatatac
      961 gcgccggtat cggttttggc tgggttagac agtttgtagg aatggacaag agccatatct
     1021 atcttgtctt tcgctttttc ttcatcggtc ttagctattt cttttccggg attgtttggg
     1081 tctggtttct tatcggagat cttaaatttg ctgttcaaaa atgcttgtgg tttgatttcc
     1141 tgatggcggt agttgatacc gtatttcaac agggtttgtt cggcaaggcg gctgtcgaag
     1201 ttgaaattca taccccgagt agtgattcgg gtatggttag ggccttttac attgcctgcg
     1261 tagccggtgc cgctgtcatc ggcggaatag cgtttctttt ccaacacata aacattggca
     1321 tccagttttt cgacaaagcc caaatctttg ccggtgtacg ccaagttggt gttggattgg
     1381 gtggtttcgc ggtaggatgg ggcttggcgt ttcatactta ttcgctcttt atcgccgccg
     1441 acggtaaatt cttcacggac ggtacggatg ccccggtgct ggtctttcat atggctcaat
     1501 acgatgcggt ggtcgccgtc gccgaaggtt gttccgattt tggcgaggta gctgcgtttg
     1561 tccagtgcgc tgtacggtac ggttttgccg ccgttgaaat tattacggaa gcctttacct
     1621 gcttcgtaat ctttttcatc gttgcggttg taagagaaca aaccgtcgaa gttgccctct
     1681 tttccgaata cgcttgcgcc gtagcttacg ccttcgttgc tggcaaagcc gctgttgagg
     1741 cgcacgcccc agtttttatc caagcctttg agcaggtctt gggcatcgac ggttttggtg
     1801 atgatcgcgc cgttggtcgc gccgataccg gcagaggcgg aacccgcgcc tttttgtacg
     1861 gaaacgactt taaccaaagc gggatcgaca ataaatctgc cttggtggta aaggatttgg
     1921 ctgtcggaat aggcgttgtc caccttgatg tcgacagagt tctgacccat gccgcgcagc
     1981 gtcaggaatt gggacgtgcc gttgccgccg ccgaaatcga tggagggctc ttcttttaag
     2041 agttcgcgca tatcggttgc ggtgctttcg tctttttgtt gaagcgtaac gatgttggta
     2101 cggattttgc tgccttggcg gtcgcctttt acggtaacgg tatccaatgc gacattggca
     2161 ttattttctg ccgcatgggc aaaacctgcc gccagggtaa gcgagagcag gctgaggcgg
     2221 aaaaacgggg cgttcatttg ttcgtccttt tgagtgtatg aagggaagta aatccaaacc
     2281 gttaaggttt ggcaggataa gaaaaataat aattattttt gtttatatta acgagagggg
     2341 ggatttgtgt aaagctgatt atcgttttta tttgcgaagt gttgtttttt gttgacaggt
     2401 tttgtcggaa atgtatagtg gactaacaaa aatcaggata aggcgacgaa gccgcagaca
     2461 gtacagatag tacggcaagg cgaggcaacg ctgtactggt ttttgttagt ccactataaa
     2521 aaacggcgga aatatagtgg attaacaaat gcgggaatga cgaaaagcaa cctttccgcg
     2581 tccttcccgc gaaagcggga atctagaacc cctaacgcgg caggaatcta tcggaaaaaa
     2641 ccgaaaccga acgaacctag attcccgcct gcgcgggaat gacgaggcct gcgcgggaat
     2701 gacgaaaagc aacctttccg cgtccttccc gcgaaagcgg gaatctagaa cccctaacgg
     2761 gcaggaatct atcggaaaaa accgaaaccg aacagactgg attcccgcct gtgcgggaat
     2821 gacgaagcct gcgcgggaat gacgaaaagc aacctttccg cgtccttccc gcgaaagcgg
     2881 gaatctagga actcaaagct gcaagaattt atcagaaaca actggaactc aaaaaaacta
     2941 gattcccgcc tgcgcgggaa tgacgaaggg ttaaagaaat gatgagaaac ggcggtaatt
     3001 tatcgggaat aaccgaaaac gaacggaaat caggacaagg cggcgaagcc gcagacagta
     3061 cggataggac ggaaccgatt cacttggtgc ttgagcacct tagagaatcg ttctctttga
     3121 gctaaggcga ggcaacgacg tactggtttt tgttcatcca ctataacagc aaccctgtcg
     3181 ccgtcattcc cgcgaaagcg ggaatccagt ccgttcagtt tcggtcattt ccgataaatt
     3241 cctgctgctt ttcatttcta gattcccact tttg
//
LOCUS       DAWKOX010000186         3188 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.186, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000186 DAWKOX010000000
VERSION     DAWKOX010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3188
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.186"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            358..981
                     /locus_tag="WJK78_001846"
     CDS             358..981
                     /locus_tag="WJK78_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ7598722.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1092..2474
                     /locus_tag="WJK78_001847"
     CDS             1092..2474
                     /locus_tag="WJK78_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7598723.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNQDGLQCALSQLEGVEDIGFSFDRQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2478..3002
                     /locus_tag="WJK78_001848"
     CDS             2478..3002
                     /locus_tag="WJK78_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ7598724.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          653 a          860 c          951 g          724 t
ORIGIN      
        1 ctcaagatat agtggattaa atttaaatca gtacggcaag gcgaggcaac gctgtactgg
       61 tttaaattta atctactata tttccgcctg ctgccgcccg aaaagcgtga tgcgctgatg
      121 gtgctgctgc acaatccgga cgacggatag ccgttgaaaa cgggaaatgc ccgggcggtg
      181 tcgcctgtgc ctgtttggac aagcgttctt gagggcggta gaattgaggt ttgcccgaaa
      241 agggcagggc gatatgccgc gcttggattt tgcgcgcggt ttttcgcgtt ggaagcaatc
      301 attgtctgtt tgaatattta atgccgtctg aaacgtccgg acgcgccccc gttccctatg
      361 aaaaaaccga ccgataccct acccgttaat ctgcaacgcc gccgcctgtt gtgtgccgcc
      421 ggtgcgttgt tgctcagtcc tctggcgcac gccggcgcgc aacgtgagga aacgcttgcc
      481 gacgatgtgg cttccgtgat gaggagttct gtcggcagcg tcaatccgcc gaggctggtg
      541 tttgacaatc cgaaagaggg cgagcgttgg ttgtctgcca tgtcggcacg tttggcaagg
      601 ttcgtccccg aggaggagga gcggcgcagg ctgctggtca atatccagta cgaaagcagc
      661 cgggccggtt tggatacgca gattgtgttg gggctgattg aggtggaaag cgcgttccgc
      721 cagtatgcaa tcagcggtgt cggcgcgcgc ggcctgatgc aggttatgcc gttttggaaa
      781 aactacatcg gcaaaccggc gcacaacctg ttcgacatcc gcaccaacct gcgttacggc
      841 tgtaccatcc tgcgccatta ccggaatctt gaaaaaggca acatcgtccg cgcgcttgcc
      901 cgctttaacg gcagcttggg cagcaataaa tatccgaacg ccgttttggg cgcgtggcgc
      961 aaccgctggc agtggcgttg attttgaacc cgcgccgcaa ccgaaatacg gcgaatcctg
     1021 tataatccga aaatctgttc actggaagtt cagacggcat tgcaactgtt gatgccgtct
     1081 gaaaaaatat gatggcaaga gataaccgca tccaaatgtt tccgcacgaa tggcgcgcca
     1141 gtacgacgct ttccggcgtg tacgcgctgc gtatgctggg tatgttcctc gtgctgcccg
     1201 tattggcggt gtatgccgcc tcgctgcccg gcgcggaagg caacaaaacg ctggtcgggc
     1261 tggcaatggg catttacggg ctgacacagg ctctgctgca actgcctttg ggcatcgctt
     1321 ccgacaagtt cgggcgcaag aaaaccattt atgtcgggct gattgtgttt gcagcgggca
     1381 gcttccttgc cgccgccgcc gatacgctgc ccatgctggt cgccgcacgc gccatacagg
     1441 gtgcgggagc ggtcagtgcg gcggttaccg cgctgctggc ggatttgacg cgcgacggcg
     1501 tacgtacccg cgcgatggcg atgatcggtt tgagtatcgg tctgacgttt tcggtcagcc
     1561 tcgtcgttgc ccctgtgatt gccgacgcgg tgggcgtacg cggcttgttt ctgctgaccg
     1621 gtattttgac cgttgccagt atcggcgtgg tggcgtggat gactcccgac ccggaggttt
     1681 ccaagctgca cgaagatacg caggcgcagc cttcgcgcat aggcgaagtt ttgaaaaacc
     1741 gtaggctgct gacgctcgat ttcggcattt tcgccctgca cgccgcgcaa atggcattgt
     1801 ttaccgcgct gcctttcgcg atgacccagc tcggtttgga aaaaatccag cactggaaag
     1861 tctatctgcc ctcgaccatt acgggattgg tggtaatggt tccgctgatt atcgtcggcg
     1921 agacgcgcaa caagcttaag caggtttttg ttttgggtat cgtctgtatt gcggcggcgc
     1981 agctcggttt gctgtccggt atgcgctcgg taggcttgat taccgcttat ttggttgttt
     2041 actttatcgg ttttaatgtg ttggaagcga gcctgccgtc tatggtttcc aaaatcgcgc
     2101 cgtccgacct gaagggtacg gcgatgggcg tgtacaacac gatgcagtcg ctcggactgt
     2161 ttgccggcgg cgcggcaggc ggtttgctgt ttcaaaaata cggcttttcc ggcgtgtttg
     2221 ccttttgcag tatattgatg ctgctgtggc tggtaattgc cgttttatcg cccgcgccca
     2281 agcccgtcaa aaacctcagt taccctgtcg gcggcgtgtg gcagggcaat caggacggct
     2341 tacaatgcgc cttgtcgcaa ctcgaaggcg tggaagacat cggtttcagt ttcgacaggc
     2401 agaccgtcta tctcaaagtg ttgcagaagg gtttcgatca ggctgccgct gaaaaaatca
     2461 tcacaggagt ttaaaaaatg tcattgaaca aagtcatcct tatcggccgt ctcggacgag
     2521 atcctgaagt acgctatatg cccaacggcg aagccgtctg caatttcagc gtcgccacca
     2581 gcgaaacttg gaacgaccgc aacggtcagc gcgtagagcg caccgagtgg cacaacatca
     2641 cgatgtaccg caaactggcg gaaattgccg ggcaatacct caaaaaaggc gggctggttt
     2701 atctggaagg cagaatccaa agccgcaaat accaaggcaa agacggcatc gaacgcactg
     2761 cttacgatat tgtcgccaac gaaatgaaaa tgttgggcgg gcgcaatgaa aacagcggcg
     2821 gtgcgcctta cgaggaaggt tacggtcaga gtcaggaggc ttaccaacgc cccgcgcagc
     2881 aaagccggca gcccgcctcc gacgcgccgt cccatcccca agaagcacca gccgcgccgc
     2941 gccgccaacc cgtgcctgcc gccgccccgg tcgaggacat tgacgacgac atcccgttct
     3001 gaattttacg gcagcacatc ctcgcggagg gaaatcataa aggacggaga aaccttaaac
     3061 cttacggggc agggtttctc ttttttgcat ttgtgccggc ttgttgctgc cccctgcgtt
     3121 gggcggaacg ttgcgattgc gccgttctgg cgttttgagg cagtgatgcc tgccgcaggc
     3181 ccacgctg
//
LOCUS       DAWKOX010000187         3165 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.187, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000187 DAWKOX010000000
VERSION     DAWKOX010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3165
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.187"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(75..668)
                     /gene="ribA"
                     /locus_tag="WJK78_001849"
     CDS             complement(75..668)
                     /gene="ribA"
                     /locus_tag="WJK78_001849"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ7598725.1"
                     /translation="MSELLNYVASCRLPTEWGVFTMHGFEEANGQEHVALTVGDFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(661..1335)
                     /locus_tag="WJK78_001850"
     CDS             complement(661..1335)
                     /locus_tag="WJK78_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598726.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMGMGTASIDRSV
                     LWRSDEGWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENQAFQ
                     LICLSQQGEGLENIWNLDENVADVSLACRCAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPICTESGGVLGVVHVEFECAECADEAAQAEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            1489..1573
                     /locus_tag="WJK78_001851"
     tRNA            1489..1573
                     /locus_tag="WJK78_001851"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1523..1525,aa:Leu,seq:tag)
     gene            2093..3127
                     /gene="purM"
                     /locus_tag="WJK78_001852"
     CDS             2093..3127
                     /gene="purM"
                     /locus_tag="WJK78_001852"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ7598727.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
BASE COUNT          807 a          834 c          784 g          740 t
ORIGIN      
        1 ttattgcttt atcaaggtat ggaaacctgt ttcccgaaag gcggcgcagg atgcccgttc
       61 cctgcaactt tgccttattc cgacatcaga tgtcccagct tgtctgcttt ggtttggagg
      121 tagcgtttgt tttcaaggtt ttccccgacg tgcaggggga tgcgttcgac cacgttaatc
      181 cccgcatctt tcagggtttg gattttttcg gggttgttgg tcagcagttt gaccgagcgg
      241 atgcccagat attcgtagat agattgcgcc aaacggaaat cgcgggcatc gacgggcagc
      301 ccgagtgcca aattggcttc aaccgtatcc ataccttggt cttgcagatg ataggcgcgg
      361 attttgttaa tcagcccgat gccgcgtcct tcctgacgca gatagacgat gatgccgcgc
      421 ccctctgtct gtaccgccct catggccgct tcaagttgag gtccgcagtc gcattttctc
      481 gagaacagcg catcgcccgt caggcattcg gagtggatgc gcgtcagaac cggattgccg
      541 tctgaaaaat caccgacggt cagcgcgacg tgttcctgcc cgtttgcctc ttcaaagccg
      601 tgcatcgtaa atacgcccca ttcggtcggc aggcggcagg aagcaacata gtttaataat
      661 tcagacattt tcatctcctt ctgcggcagt gatgcccaaa agctgcttca aaggttcgga
      721 caaagccaag gcaagagcca cccattccgc ctgcgctgcc tcatccgcac actctgcgca
      781 ttcaaattcc acatgaacca cgcccaacac accgccactt tccgtgcaga ttggaatgga
      841 aatttgcgcc gccgaagcat gattgcgttc tcccgaaagc tcccccaaat ccaaccaacg
      901 gcgtacatcc gaggcaacat tcatccagcc gctttgcgcg caacggcagg caagtgaaac
      961 atcggcaaca ttttcatcta gattccatat gttttccaaa ccttctccct gttgggacag
     1021 gcatatcagt tggaaagcct ggttttcaga cggcatcaag gcatagaccg ccgcactccg
     1081 cacgcctgtc gagcgcgaaa acaccgaatc caaagccatg aaaagccgtt tcagtgcatc
     1141 ttcgcggaca ttgtcgcacg acaggtaatc ggcaagtttc caaccctcat cactgcgcca
     1201 caaaaccgaa cggtctatcg aagccgtccc catacccatt accgtctgcg ccgtcagata
     1261 cgccgcccga acctcgtcaa gcggcagctt caaaccctga gtcagcagaa aatccttaat
     1321 caaagcagca ggcataccca aattccgtca ataaaaacaa aaaaccgccc gattccgatg
     1381 tcaggcggac gaaaaacaga ttttaccgcc ccaaacccca agccatcaac agccccgccg
     1441 aaaaccttgc acaaaaaaac aaaatctgta taatcgtcca attcccatgc ggacgtggcg
     1501 aaattggtag acgcaccaga tttaggttct ggcgccgaga ggtgtgagag ttcgagtctc
     1561 tccgtccgca ccaataatga taaataaatt atatagttaa tgcttatcgg gacaaattag
     1621 tgccacaaaa cataagtcgt ctgcttttca gcgggcggct tttttatctg cctatatgtt
     1681 tcaacacgca gaacggtaca taaagtgccg ccatttgttc cgcaccgaat cggaaacggg
     1741 tgcttccgcc cgcaatcaga ttcaccgccc ctaatgccgg ggtttcaacc ggaaagaaga
     1801 aaatattgat tttgatgatg gcatcaaaaa accccttccg ctcgtctgcc aaaaggaatg
     1861 gttaagaaaa gcaatgcgtc ttttgatgga acgcgatata taaggaattg aggggaaggg
     1921 caggcgggtt tctgcccgtt aatcctgcgg acggtcccgc caaacccgac acgcgcgggt
     1981 atatggcgga ctgtttacaa tattgtctaa aaatctgaac ctgcaaacgt gaaataaggt
     2041 agaatacgcc ccgttatttt accgtccaat ccccatttac caaggaaaaa cgatgagtac
     2101 ttcattgagt taccgcgatg caggtgtcga tatcgacgca ggcgaccaac tggtcgaaaa
     2161 catcaaaccg tttgccaaac gcaccatgcg tccggaagta ttgggggatt tgggcggttt
     2221 tggcgcattg gtcgaaatcg gcaagaaata taaaaatccc gtattggtca gcggtacgga
     2281 cggcgtgggt accaagctca aacttgcctt cgattgggat aaacacgata cggtgggcat
     2341 cgaccttgtt gcaatgagtg tcaacgatat tttggttcaa ggagcagaac ctctgttttt
     2401 cttggattat ttcgcctgcg gcaaattgga tgttccgcgc gcaaccgatg tcatcaaagg
     2461 cattgcacaa ggttgcgaag aatccggctg cgccctgatt ggcggggaaa ctgccgaaat
     2521 gccgggtatg tatcccgtcg gagaatacga tttggcgggt tttgccgtcg gcgtagtgga
     2581 aaaagagaat gtcattaccg gccgcagcat cggcgcgggc gatgtggtat tgggtttggc
     2641 ttccaacggc gcacattcaa acggctattc ccttatccgt aaaatcatcg aacgcgacaa
     2701 tcccgatttg gatgccgagt ttgataatgg caaaaccttg cgtgaggctg ttattgcgcc
     2761 gacccgtctg tatgtgaaac cgattcttgc cgctttggaa aaatttacca ttaaaggtat
     2821 ggcacacatt accggcggcg gcattaccga aaacgtgccg cgcgtgttgc ctgaaaacac
     2881 ggttgcacaa atcgatgcta aatcgtggga attgcccaag ctcttccaat ggcttcaaaa
     2941 ggcgggcaat gtggaaaccc aagaaatgta ccgaaccttt aactgcggca tcggcatggt
     3001 cgttattgtt gctgccgaag atgccgatgc ggttcagggt ctcttgggtg aacaaggtga
     3061 aacagtttac cgtttaggtt tgatccgtga gcgtcaggga gacgagcatc aaacccaggt
     3121 tgcctgattg cttctatagc gaaatgccgt ctcaaacatg ggttt
//
LOCUS       DAWKOX010000188         3161 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.188, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000188 DAWKOX010000000
VERSION     DAWKOX010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3161
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.188"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(21..254)
                     /locus_tag="WJK78_001853"
     CDS             complement(21..254)
                     /locus_tag="WJK78_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598728.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPRRRESRPFGFGFFG"
     gene            complement(284..3052)
                     /locus_tag="WJK78_001854"
     CDS             complement(284..3052)
                     /locus_tag="WJK78_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7598729.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRTGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQQYFVQTGGLKFNSNSGKWER
                     DLQRQFWKTSYYKQYKDPQKLKKYIEDQDKDWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYSSEGEFKRAFGENSPTYKKHCNPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGNIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTRDVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEEVTCNDDKTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
BASE COUNT          725 a          761 c          786 g          889 t
ORIGIN      
        1 agaaatttaa tgttgcggca ctaaccaaaa aaaccgaaac cgaacggtct agattcccgc
       61 ctgcgcggga atgacgactc ataaattacc cgaaacaacc aaaaataacc gaaatcaaaa
      121 accggcttcc ctgcgtggga atgaaatgga tttttctttg agttgccgat gcgataaaac
      181 ggattggcat aggcttgcgg caggatgatg cgtttgggga aacaaatgcc gtctgaaggg
      241 ctttcagacg gcattgcggt tttctacaaa acgcgggctg cctttaaaac ttgtagctca
      301 tcgtcatcaa aaaggtgcgt ccgcgtgcaa aattggtcaa tacgcttttg cttgtgccgc
      361 cgtatttgcc gttgcacaac gttttatcat cattacacgt tacttcttcg tccttgtctt
      421 tcgggtcgaa cgagctgtaa taacgctgcg ttgccgcatc attgcccgca tcgagcggat
      481 cgatataacg cctgtcgaac agatttttga cttcggcgcg gaaaataagg tttttcttcg
      541 gctcgtaagc ggcgtaaaaa tcaaaaatca aaggctggcg ggcaagggtt tcggtttgtt
      601 tgatggaacg cttgcccagt tgccggacat cgcgggtatt tcccccgttg gtgccgtcga
      661 tatagcgttc ttcagccgtc gcgcggatgc tcttgccgaa atagcgcatc gcgccgccca
      721 aagtcagttt gttgcccaac cagcgcgtac cgacttccaa acgtccgtaa tctcgcggca
      781 gggcggaaac cctgctcaac ccataacctt gtttgagttg gtcttctttg gacgcattgt
      841 tgggcgattc gctcgcatcg ctgaagttgg tcggttgcgt gcttttttga taggcgtaag
      901 aaaggttggt gaaaaaacgc ccataatcgt aattcagctc caactcaaaa ccgtgtttgt
      961 gcactttgtc tttgaaattg cggtgttgga tggtgtaggc aagcccggtg ctgctgaccc
     1021 agctcggaat attcccgttc aaatcccacc atttcccgta aacgttgtgg atgtagttgt
     1081 cgatgcggct gcggtagccg accagtttta atcctaatgt atcatcttgt tttaacagtc
     1141 cttttttata ggtattgaag ccaaattgcc aagtgtttgc gcgctctggt tttaaggcgg
     1201 tgtgaacgcc ggagtcgccg atttgggaaa aatacatttc ttggatgttg ggcatacggt
     1261 gtgtgcgcga atagctggcg aacggcatga aataatcgcc gaagtccgca ctaatgctga
     1321 ccgaatggtt gttggcgcgc tttttgccgt attttttcaa tacgggttca taaagcccgc
     1381 agctcgggtt gcaatgtttc ttgtatgtcg gcgagttttc tccgaatgcc cgcttaaatt
     1441 cgccttccga gctgtaatag cccgtatatt cgccgccgaa acggtagccg acggtattgg
     1501 tgctgtagtt taagcggtaa atgtcttttt tgagcgcggc atcgaagtag aacgtgttga
     1561 aatattggct gccggccggt tggacaatgg ttgatttttg gggcagcagc cctttatcgc
     1621 ccttaaaccg ccccaaatag gaataaagcc cgttgtcctg atcaggaccg tcgaaaaaca
     1681 gccccaattc ttcaggaaag cggtttttgc cgtattcgtt gtggaaataa ttgaagccca
     1741 aagtggtttg caactcggtt tcgcggggca gccggaaggt ggcggtgttg ttgaggtcga
     1801 ggatttttgc gttgttgtag gtttcaaaat cctttaaaag cccccagcct gtaaacttcg
     1861 accctttcgg atatttctgc ctgcccgaat tgtaggctgc ggtcagattg aggttggcat
     1921 atgagtttaa agataaaccg taattgaatt gataattgcg gttgatgatt ttgcggctgc
     1981 cgattttggt gtttaaatcg cgaaattgcg ccgtgtattt attgaatacg ccgtcgtatt
     2041 ccaatttaaa cagattgcct gccgactgct gcttcaggct ggacggatcg atgggggtga
     2101 tgtcgtattg cggcgccagg ttttcccgcc agtctttatc ttggtcttcg atgtattttt
     2161 tcagtttctg ggggtctttg tattgtttat agtaactggt tttccagaat tgcctttgca
     2221 aatcgcgttc ccattttccg ctgttggaat tgaatttcaa cccgcctgtt tgtacaaaat
     2281 attgctgctt gcgccgttcc agatattccg cgccaaaatt tccgatgtgc tgcccgccgc
     2341 cgcccacgcg gtaattttgc gccacgctgc gcctgctgtg cccgtaaagc acaccgacag
     2401 atgctccgct ttccagccat ttgcgcgcac ctatcgccgc catcgcatta cctttggttg
     2461 aattggtgcc ggtcagacct tttagcagca ggccgtaggt attattgccc tgaacgacgt
     2521 catccacgcc taaagtccgc agattcgccg aaccggcaag gctgttgatg cctgccgagc
     2581 cgctgaagct gcctttgacg acatccagtc cggcaataaa attgctgtcg acagatgcac
     2641 cgaattgaga tgaaccgcct gccctgcccg catcggtaga agtcgaataa aaggtctgcg
     2701 tgataccgtc caccatcgta ttgacccgcc cgaacccgct gtcgccgcga atattcaaag
     2761 acacaatgcc cgagctttta tcttgctgtg taaacgcacc gggtatgctg cgtacgatgt
     2821 tgtcgaggtt ttcgctggat ttgaatatat cctgacgggt cgatacggca cgcgcatcgg
     2881 taaacacttt tttgtctttc ggtacgcgct tcgccttgac gtgcacatct tccaaaacct
     2941 gtatctgcgc ctcgctgccc gtgcgccctg catcttcggc ataactatga tgatatagca
     3001 taacacccat aagataaaaa caaatcggct tcaaccggaa agaagatctc atattttcct
     3061 caacaataaa cagtcagaca attaagaaat atattagcat ttttttaggc ggcataaaca
     3121 ttaaaaagtg taaattcgat ataccgtctg aagatttcaa t
//
LOCUS       DAWKOX010000189         3118 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.189, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000189 DAWKOX010000000
VERSION     DAWKOX010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.189"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(125..976)
                     /locus_tag="WJK78_001855"
     CDS             complement(125..976)
                     /locus_tag="WJK78_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ7598730.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1324..2838
                     /gene="katA"
                     /locus_tag="WJK78_001856"
     CDS             1324..2838
                     /gene="katA"
                     /locus_tag="WJK78_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ7598731.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            2914..>3118
                     /locus_tag="WJK78_001857"
     CDS             2914..>3118
                     /locus_tag="WJK78_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598732.1"
                     /translation="MPSETSFDRFRRHFPIPPPPFQWAFFIKRKISRHSRPTAHFSAV
                     IPAPSPPVQTGTKTFPRHSRESGN"
BASE COUNT          744 a          883 c          812 g          679 t
ORIGIN      
        1 gtttctagat tccctctttc gcgggaatga cgggatgcag gtttccgcgc ggacggattc
       61 ggcattcccg ctttcgcaga aatgccggct tttggtttgt tgtctttata agattattcg
      121 gcaattattc tgcggttttg cgtttgtgtg ctgccggaat ctcaaaggat tctctgtatt
      181 tggcaatggt gcggcgagaa acctccatgc cgcggaaagc cagcaggttg gcgagcgcct
      241 cgtcagaata cggcgtgggt gtggacgagg caaaaccggc ggcgggaaag ggattgagcg
      301 aagcaatgag gtcgagtgcg gcttcgagtg tgccgctgtc ggtttggggc aggcgttttt
      361 ttattcgcgc gagggtttgg ctgcggttgc cgtcaatgct gtcgagggcg tttcggacga
      421 tatgcagggc ggagggtttg gcagcacatt cgcccgatct ttctatctgc agtatcagcg
      481 attcgttcaa atcggcggcg gccacgcctg ccgggtcgaa ttttttcaat gcggtcaggg
      541 cttgtttcag cattgcttca tccaacatcc actccaaggg cgtatggtcg aggatgtctt
      601 cgatgctgtc ggtcagataa ccttgctcgt caaggaaatc gatgaggatg tggacacagg
      661 cggattcttg gtcggaaagc gggtgttcgc atacttgcgc gtgcaggtat tgcttgaaat
      721 cctgctcgcc ggcgatgttg gacagcatat cttcgccttc gtctccgccg atttgacggg
      781 caggcgcagt gtaatggctg aactcggcat cggaaaattc atccgtgtct ttgcgttcga
      841 gcagggggtt gtccgacagc cagttttcga cctcgcgttc aagttcgata cccgacatct
      901 gcaatacgcg caaagattgt tgcagccgct ggttgagctg ctgggtctgt ttgagcttta
      961 ttccgagtaa ggtcatgata atgtggggaa aattgttatt ttcagcctgt cggcgcaaaa
     1021 aatgccgcaa agcgtcattg cattataaat ggttttaatg agcgggttcg gattccgttc
     1081 gataacaaaa aacaaacgaa aatcaagaac cgattgctta taataatatt aaatcgattt
     1141 catagtttta atagcgaaaa tcttggcgta tagtcgcatc catagttttt acaaaaggga
     1201 aataaaatgt cgattcaaga aatttattgc aatcaagaaa ccggttacga atacgctttc
     1261 cgccaaatcg tactgtaagc cgtttacccc catttgacca acctgagaaa aggaacaaga
     1321 gcgatgacta cctccaaatg ccctgtaacc catctgacca tgaacaacgg cgcgcctgtt
     1381 gccgacaatc aaaacagcct gaccgccggt cctcgcggcc ctctgctggc gcaggatttg
     1441 tggctgaatg aaaaactcgc cgacttcgtg cgcgaagtca tccccgaacg ccgtatgcac
     1501 gccaaaggtt cgggcgcgtt cggtacgttt accgtaacgc acgacatcac caaatacacc
     1561 cgcgccaaaa tcttcagcga agtcggcaaa aaaaccgaga tgttcgcccg tttcaccacc
     1621 gtggcaggcg aacgcggcgc agccgatgca gaacgcgaca tccgcggttt tgcgttgaag
     1681 ttctataccg aagaaggcaa ctgggatgtg gtcggcaaca acacgcccgt gttcttcctg
     1741 cgcgacccgc gtaagttccc cgacctgaac aaagccgtca aacgcgaccc gcgcaccaat
     1801 atgcgctctg ccacaaacaa ctgggacttc tggacgctgc tgcccgaagc actgcaccaa
     1861 gttaccatcg tgatgagcga ccgcggcatc cccgccggct accgccatat gcacggcttc
     1921 ggttcgcata cctacagctt ctggaacgaa gcaggcgagc gtttttgggt gaaattccat
     1981 ttccgcaccc aacaaggcat taaaaacctg accaacgaag aagccgccaa aatcatcgcc
     2041 gacgaccgcg aaagccatca gcgcgactta tacgaagcca tcgaacgcgg cgagtttccg
     2101 aaatggacga tgtacatcca agtcatgcct gaagcagacg cggaaaaagt accttatcat
     2161 ccgtttgact tgaccaaagt ttggccgaaa aaagactatc cgctgattga agtgggcgaa
     2221 ttcgagttga accgcaatcc cgaaaacttc ttcgccgatg tggaacaatc cgccttcgca
     2281 ccgagcaacc tcgttcccgg tatcggcgcg agcccagata aaatgttgca agcccgtttg
     2341 ttcaattacg ccgacgcgca acgctaccgc ttgggcgtga acttccgcca aatccctgtc
     2401 aaccgtccgc gttgccctgt tcacagcaac cagcgcgacg gacaaggacg cgccgacggc
     2461 aactacggca gcctgccgca ctacgaaccc aacagcttcg gccaatggca gcagcagccc
     2521 gacttcgccg aaccgccttt gaaaatcaac ggcgacgcgg cgcactggga ctaccgccaa
     2581 gacgatgacg actatttcag ccaaccgcgc gccctgttca acctgatgaa cgacgcgcag
     2641 aaacaggcat tgttcggcaa caccgccgcc gcaatgggcg acgcgcccga cttcatcaaa
     2701 taccgccata tccgcaactg ctaccgttgc gatccggcat acggcgaagg cgtggcaaaa
     2761 gccctcggac tgactgtcga agacgcacaa gccgcccgcg cgaccgaccc cgcactcggc
     2821 cagcccggtt tgctgtaagg gggcattatg tggatggaaa ttgaagaaat cctgtcccgc
     2881 gccgtccgct accggaaata accgggcata aaaatgccgt ctgaaacgtc gtttgaccgc
     2941 ttcagacggc atttccccat cccgcccccg ccgtttcagt gggcgttttt tattaaacgc
     3001 aaaatatccc gtcattcccg ccccacagcc cacttttccg ccgtcattcc cgcaccatcc
     3061 ccaccggttc aaaccggcac gaaaactttt ccgcgtcatt cccgcgaaag cgggaatc
//
LOCUS       DAWKOX010000190         3080 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.190, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000190 DAWKOX010000000
VERSION     DAWKOX010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3080
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.190"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            86..1315
                     /gene="sstT"
                     /locus_tag="WJK78_001858"
     CDS             86..1315
                     /gene="sstT"
                     /locus_tag="WJK78_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ7598733.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            1427..2707
                     /locus_tag="WJK78_001859"
     CDS             1427..2707
                     /locus_tag="WJK78_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ7598734.1"
                     /translation="MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNAGNTAAQGTNQAENNQVGGSQNPAPSSNPNATNGGNFGRVDLANGVLIDGPSQNI
                     TLTHCKSDSCNGDNLLSEEAPSKSEFEQLSDEDKIKKYKKDGEKFTGLVADRLQMKGT
                     NQYIIFYKPKTTSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNI
                     FAPEGNYRYLTYGAEKLSGGSYALSVQGEPAKGEMLAGTAVYNGEVLHFHTENGRSYP
                     TKGRFAAKVDFGSKSVDGIIDSGDDLHMGKQKFKAAIDGNGFKGTWTENGGGDVSGRF
                     YGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(2784..2999)
                     /locus_tag="WJK78_001860"
     CDS             complement(2784..2999)
                     /locus_tag="WJK78_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598735.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(2992..>3080)
                     /locus_tag="WJK78_001861"
     CDS             complement(2992..>3080)
                     /locus_tag="WJK78_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ7598736.1"
                     /translation="VTMEKDLRRMLLFFKREAYVVILERDRV"
BASE COUNT          739 a          744 c          890 g          707 t
ORIGIN      
        1 cagccgaaaa ataaaaaaaa cacagagaat gagttttctt ttaaaataca acatttttta
       61 acatatcaca acataaggaa gaattatggc gttcggcaaa tccttatttc atgcgatcgg
      121 ccgcgtcagc ctggtcaggc agattgccgc cggtttggcg ttgggcatcg taatcggttc
      181 ggtttccccg caactgggct tggcggcagg cttgttcggc agcctgtttg tcggcgcgct
      241 caaagcggtc gcgccggttt tggtatttat tttggtggcg gccacaatcg cgcagcacca
      301 aaaaggcaac aaggcgcata tcaggccgat tatcatcctt tacctcatcg gtacgttttc
      361 cgcagccctg accgccgtca tcgccggtat ggttttcccg acgcacattg ttttggcggg
      421 cgcgggcgat gtgtccgccg cgccgccttc cggcattgtg gaagtattga aatcgctgct
      481 gatgaacctg gtcgccaacc cgattaacgc gattgccaat gccaactata tcggcatttt
      541 ggcttgggct ttggttttgg gcgcggcgtt gcggaatcac ggttcggacg ttacgcggca
      601 ggtcgttgcc gatttggcgg aagcggtttc caccgtcgtg aaatggatta tccgttttgc
      661 ccctttgggc attttcgggc tggtgtcgtc cacaatcgcg gagacgggtt tcggcgcgct
      721 ggcggggtat gcgaagctgc ttgcggtgct gttgggctgt atggcgttta tcgcgctggc
      781 ggtcaatccc gccatcgtgt ggtggaaaat ccgccgcaac ccttatccgc tggtgtttac
      841 ctgcctgcgc gaaagcggcg tgtatgcctt ctttacccgt tcttccgccg ccaatatccc
      901 cgtgaatatg gctttggcga aaaaactggg gctgcacgaa gacacttatt cgatttccat
      961 cccgttgggg gcgaccgtca atatgggcgg cgcggcgatt acgattaccg ttttggctat
     1021 ggcggcggcg cacacccaag gcatacaggt tgattttgcc accgcgctgc tgttgagcct
     1081 ggtggcgacg gtcagcgcgt gcggcgcgtc cggcgtggcg ggcggttcgc tgctgctgat
     1141 tccgctggcg tgcagcctgt tcggcatcag caacgatgtc gccatgcagg tggttgccgt
     1201 cggctttatc atcggcgtga ttcaggattc ggcggaaacg gcgttgaatt cttcaaccga
     1261 tgttttgttt accgctgccg ccgatttggg ccgacagaga aaccgggcgg aataaaccaa
     1321 gctatgccgt ctgaagcccg tttggcgttc agacggcata tttttacaat tttatgggta
     1381 tatggcggaa acaataccgg ctgccttgaa tatgaagggg atgatgatgt ttaaacgcag
     1441 tgtgattgca atggcttgta ttgttgccct ttcagcctgt gggggcggcg gtggcggatc
     1501 gcccgatgtt aagtcggcgg acacgccgtc aaaaccggcc gctcctgttg ttgctgaaaa
     1561 agagacagag gtaaaagaag atgcgccaca ggcaggttct caaggacagg gcgcgccatc
     1621 cacacaaggc agccaagata tggcggcagt ttcggcagaa aatacaggca atggcggtgc
     1681 ggcaacaacg gacaaaccca aaaatgaaga cgagggaccg caaaatgata tgccgcaaaa
     1741 tgccggcaat acggctgccc aaggtacaaa tcaagccgaa aacaatcaag tcggcggctc
     1801 tcaaaatcct gccccttcaa gcaatcctaa tgccacgaat ggtggcaatt ttggaagggt
     1861 tgatttggct aacggtgttt tgattgacgg accgtcgcaa aatataacgt tgacccattg
     1921 taaaagcgat tcttgtaatg gtgataatct attaagcgaa gaagcaccgt caaaatcaga
     1981 atttgaacaa ttaagtgatg aagacaaaat taagaaatat aaaaaagatg gagaaaagtt
     2041 taccggtttg gttgctgata ggttacagat gaaaggaacc aatcaatata ttatttttta
     2101 caaacctaaa accacttcat ctgcgcgatt caggcgttct gcacggtcta ggaggtcgct
     2161 tccggctgag atgccgctga tccccgtcaa tcaggcggat acgctgattg tcgatgggga
     2221 agcggtcagc ctgacggggc attccggcaa tatcttcgcg cccgaaggga attaccggta
     2281 tctgacttac ggggcagaaa aattgtccgg cggatcgtat gccctcagtg tgcaaggcga
     2341 accggcaaaa ggcgaaatgc ttgctggcac ggccgtgtac aacggcgaag tgctgcattt
     2401 ccatacggaa aacggacgtt cgtacccgac caaaggcagg tttgccgcaa aagtcgattt
     2461 cggcagcaaa tctgtggacg gcattatcga cagcggcgat gatttgcata tgggtaagca
     2521 aaaattcaaa gccgccatcg atggaaacgg ctttaagggg acttggacgg aaaatggcgg
     2581 cggggatgtt tccggaaggt tttacggccc ggccggcgag gaagtggcgg gaaaatacag
     2641 ctatcgcccg acagatgcgg aaaagggcgg attcggcgtg tttgccggca aaaaagagca
     2701 ggattgatgt tgatgccgtc tgaagcgggg gcgttcagac ggcattgtga tgtttggggc
     2761 ggcgagtccg gttcaagtcc gcatcagttg ataaacccgt cgtctttcat tttcttttcg
     2821 gaaaaatact ggccgaatac cagcagggcg gcgaggatga tgacaaacag ccccgccata
     2881 gtcagtgtga ttttgaagaa caattccgct tcgagaaaag aaaaccagag ttgcacaatc
     2941 agcagcagca cccagccggc aaacagtccg agacaggcat aaacgccgag cttaaacacg
     3001 gtcccgctcc aaaatgacga cgtaggcctc gcgtttgaaa aacagcagca tacggcgcaa
     3061 atctttttcc atcgttacga
//
LOCUS       DAWKOX010000191         3050 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.191, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000191 DAWKOX010000000
VERSION     DAWKOX010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.191"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(471..1007)
                     /locus_tag="WJK78_001862"
     CDS             complement(471..1007)
                     /locus_tag="WJK78_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ7598737.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDEEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYTTD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(1041..1397)
                     /gene="folB"
                     /locus_tag="WJK78_001863"
     CDS             complement(1041..1397)
                     /gene="folB"
                     /locus_tag="WJK78_001863"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ7598738.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1453..2055
                     /gene="plsY"
                     /locus_tag="WJK78_001864"
     CDS             1453..2055
                     /gene="plsY"
                     /locus_tag="WJK78_001864"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ7598739.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAVLTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNILNLIKGKESKIGGSR"
     gene            2132..2977
                     /locus_tag="WJK78_001865"
     CDS             2132..2977
                     /locus_tag="WJK78_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ7598740.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
BASE COUNT          754 a          927 c          651 g          718 t
ORIGIN      
        1 gagctaaggc gaggcaacgc catactggtt tttgttaatc cactataccg ttctcaaatt
       61 caaattgggc ttttaggtct ataacaaaga aaaagccttg gcaggataaa cctaccaagg
      121 ctttttatta aaaaaaacgc tctattactg tgtctaaaaa tgcaaaaaaa gtaaccatca
      181 taaccctttt gccaaaatca atatcatctt ccgatgaatg aattgacggt atataagaaa
      241 gaattaataa gctcataaac cggtaagaaa aatcagtaac aaagattttc attattaacc
      301 attcttaaaa atgatcacgt tcgtttgggt aattattata cccttttccc tcttattact
      361 aaagcacgaa tgactttaaa ggacgcgccc agagacaagc cgaaaaggca tatctcatcc
      421 gccaaacaaa atgcccgcca atctactccg gagggcagtt caacaccctg tcaatccttc
      481 atcagccagt attgcaaacc gattaatgtc ttgccgtctt taatttcatc gtttgccaat
      541 gcctgacgga cttcttcttt cgacatcaat acggtttccg taatctcgtc ttcgtcattg
      601 gcaagcgtac tgcccaaacg cacgccttcc gcctcgaaca gatacatttt ttcgttgcaa
      661 aaaccgaccg ccgtataaaa actgtaaagc aggcgtacgc tgtcggtggt ataaggcgtt
      721 tcttcagcca gttctcgtaa agcgcatgct gccatatcct cgcccgccac atccagcttg
      781 cccgcaggaa gttccaatgt cgcctgattt gccgcatacc gccactgccg taccaaaacg
      841 accttttcct catccgttac cgccaacacg cacgccgcgc ccggatgccg gatgacgata
      901 cgctgccctt cattgccgtt gggcaacctg accttatccc tgctgatgct gacgaaaccg
      961 ccctcgtaaa tggtttcgcc gcctaatttt acttccctca aatccacttc atatctcctt
     1021 tccgtttcct attctgccgt tcaatcttca cgcttgccgc gctcgatttc cacgccaacc
     1081 tcgcgcacgc cttccaaaat acccggcttg acgattttca cgcgcaccca caccgcgccg
     1141 aaatatccca aaaccaaatc ggcaatatat tccgccaacg cttccaaaag caggaaatcc
     1201 tgttctttca gatgtcggcg cagcgtttcg catacctcgg cataatgcac cgtattggca
     1261 atatcgtcgt ccgaacccgc tttctcggga acgccgatgt ccaaatcgac aatcagggtc
     1321 tgcaaccgtt cgcgctccca gccgtacacg ccgataagcg tatccgcctt gatgccgtgc
     1381 aaaaagattt tatccataat ccgccccgtt ttttgctaaa ataaccgcac cattctaagt
     1441 aaagtaccgc aaatgttcaa cataccggct gttgctgttt cctatctgat cggctcactt
     1501 tctttcgccg tcatcgtgtc caagtattac ggcatggacg acccgcgcac ctacggatcg
     1561 ggcaatccgg gggcaaccaa tgttttacgc agcggcaaaa aaaaggcggc cgtgctgacg
     1621 ctcttgggcg atgccgccaa aggtttggtt gccgttttgc ttgcacgcgt gcttcaagaa
     1681 ccgctcggtt tatccgacag cgcaatcgct gccgtcgcac tcgccgcgct ggtcggacat
     1741 atgtggccgg tgtttttcgg atttaaaggc ggcaaaggcg tggcaacggc attgggcgtg
     1801 cttctggcac tctctcccgc aactgccttg gtctgcgcgt tgatttggct tgtgatggca
     1861 ttcggcttca aggtgtcctc ccttgccgca ttaaccgcca caatcgccgc cccccttgcc
     1921 gcactgtttt ttatgccgca tacttcttgg attttcgcaa ccctcgcaat cgccatattg
     1981 gtgttgctcc gccataagag caacatcctc aacctgatta aaggcaaaga aagcaaaatc
     2041 ggcggcagcc gctgatttcc catccatccc tgtttatgcc gtctgaaccc cgcttcagac
     2101 ggcatccgaa tatcccgccg ttttaccgac tatgctcagt tacagacacg cattccacgc
     2161 cggcaaccac gccgatatgc tcaaacactt caccttgttt ttagtgctgc aatatttcaa
     2221 ccgcaaagac aagccctact ggtacatcga cacgcacggc ggcgcgggtg tgtacaatct
     2281 cgaaggcagc gaggcacaaa aagtcggcga ataccggcaa ggcatcgccc tacttcgaca
     2341 agcaaaaaac ctgccaaccg agttaaacgg ctttatcgcg cacatacaaa aaatcctgcc
     2401 ctcgcccgaa ctttactgcg gttctccgtg gctggcgcaa tcgctgaccc gcgtcggcga
     2461 caaattacgc ctgtttgagc tgcaccccac cgactttgtc catctgcaaa acaatatggg
     2521 cgaagcagga ttgggcaaac gcggacaagt gttgcgcgaa gacggttaca aagggctgat
     2581 ttccctgctg ccgcccccgc cgcgccgcgc caccgtcctc atcgacccgc cctatgagga
     2641 aaaacaggac taccggcgtg taacggaaac gctgaaagcc gctttaaaac ggtttgagtc
     2701 cggctgttat ctcatttggt atccctgcct cagccgcgaa gaaagccgca agctgcccga
     2761 agaattgaaa aaactcctgc ccgacaacta ccttcacgcc gaacttcacg tccacgcgcc
     2821 gaaagccgac ggtttcggta tgcacggcag cggaatgttc gtcatcaatc cgccctatct
     2881 gttggcggaa caattggcgg caaacctccc cgccctgacg cggctgctgg cgcaagacga
     2941 aggcgcgcgc taccttttgg acagcaaaat ccgctgaccc cgatgccgtc tgaaaccctt
     3001 cagacggcat ctcccatcaa acaaaaccgg acgatatacc ggcagccggc
//
LOCUS       DAWKOX010000192         3015 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.192, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000192 DAWKOX010000000
VERSION     DAWKOX010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3015
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.192"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            20..1915
                     /gene="mnmG"
                     /locus_tag="WJK78_001866"
     CDS             20..1915
                     /gene="mnmG"
                     /locus_tag="WJK78_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ7598741.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            1983..2567
                     /gene="rnhB"
                     /locus_tag="WJK78_001867"
     CDS             1983..2567
                     /gene="rnhB"
                     /locus_tag="WJK78_001867"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ7598742.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
BASE COUNT          815 a          933 c          743 g          524 t
ORIGIN      
        1 accgtcaggc aatacacaca tgacccacat gatttacccc aaaacctacg acgttatcgt
       61 cgtcggcggc ggacacgccg gcacagaagc cgcgctcgcc gccgcccgta tgggcgcgca
      121 gacgcttttg ctcacacaca atattgaaac gctcggacaa atgtcgtgca acccttccat
      181 cggcggcatc ggcaaagggc atttggtgcg cgaactcgac gcgctcggcg gcgcgatggc
      241 gttggcaacc gacaaatccg gcatccagtt ccgccgtctg aacgccagca aaggcgcggc
      301 agtacgggcc acgcgcgcgc aggcggatcg tatcctatat aaagccgcca tccgcgaaat
      361 gttggaaaac caagaaaacc tcgacctttt ccaacaagcc gtcgaagacg taacgctcga
      421 tggcgaccgc atttcaggcg taatcaccgc gatgggcgtg gagtttaaag cacgcgccgt
      481 ggtgttgacc gcaggcacgt ttttgtccgg caaaatccac atcggtttgg aaaactacga
      541 gggcggacgc gccggcgacc ccgccgccaa atcgctgggc ggacgtttgc gcgaattgaa
      601 cctgccgcaa ggccgtctga aaaccggcac gccgccgcgc atcgacggac gcacgattga
      661 cttctcccaa ctgaccgaac agcccggcga cacgcccgtt cccgtcatgt ccgtacgcgg
      721 caacgccgaa atgcacccgc gccaagtgtc ctgctggatt acgcatacca acacgcaaac
      781 ccacgacatc atccgctcag gcttcgaccg cagcccgatg tttaccggca aaatcgaagg
      841 cgtgggcccg cgttattgtc cgtctatcga agacaaaatc aaccgcttcg ccgacaaaga
      901 cagccaccag attttcctag aacccgaagg cctgactacg cacgaatact accccaacgg
      961 tatctccacc agcctgccgt tcgacatcca aatcgcgctc gtccgcagta tgaaaggttt
     1021 ggaaaacgcc catatcctgc gccccggcta cgccatcgaa tacgactact tcgatccgcg
     1081 caacctcaaa gcaagcctcg aaaccaaaac cattgccgga ttgtttttcg ccgggcaaat
     1141 caacggtacg acaggttatg aagaagccgc cgcgcaagga ctgctggcag gcgcgaacgc
     1201 cgtgcaatac gtccgcgaac aagacccgct cctgctgcgc cgcgaacaag cctatctcgg
     1261 cgtattggtg gacgacctca tcaccaaagg cgtgaacgaa ccctaccgaa tgttcaccag
     1321 ccgtgccgaa taccgcctgc aactcaggga agacaacgcc gatatgcgcc tgaccgaaga
     1381 cggctacaaa atcggcttgg tgggtgaagc gcaatggcgc atgttcaacg aaaaacgcga
     1441 agccatcgaa cgcgaaatcc aacgtttgaa aacaacgtgg tacacgccgc aaaaactcgc
     1501 cgaagacgaa caaatccgcg tattcgggca aaagctcagc cgcgaagcca acctgcacga
     1561 cctcctgcgc cgcccgaacc tcgactacgc cgcgctgatg acgctcgaag gcgcgatgcc
     1621 gtctgaacgc ctctccgccg aagtggtcga acaagtcgaa atccaagtca aataccaagg
     1681 ctatatcgac cgccaaaacg aagaaatcga cagccgccgc gacatcgaaa ccttaaagct
     1741 gcccgaggat atcgattaca gcaaagttaa aggtttgtcg gcagaagtgc agcaaaagct
     1801 caaccagcac aaacccgaaa ccgtcgggca ggcaagccgc atttccggcg taacccctgc
     1861 ggcagtggca ttgctgatgg tgcatttgaa gcgcgggttt aaagacgcga aataaacaca
     1921 tcggcgcgat gccgtctgaa acaccgttca gacggcatcg cgccatcccg acaggaaaca
     1981 tcatgcacat actgaccgcc ggcgtggacg aggcagggcg cgggccttta gtcggcagcg
     2041 tgtttgccgc cgccgtcatc cttccggaaa tattcgacct gcccggactg accgactcca
     2101 aaaaactcag cgagaaaaaa cgcgacgcgc ttgccgaaat gataaaaaat caggcggttg
     2161 cgtggcacgt tgccgccgcc tcgcccgaag aaatcgccag cctcaacatc ctgcacgcca
     2221 ccatgctcgc gatgaaacgc gccgttgacg gtttggctgt gcgtcccgaa agaatattca
     2281 tcgacggcaa ccgcattccc gaacatttga acatccctgc cgaagccgtc gtcaaaggcg
     2341 acagcaaaat catcgaaatc tccgccgcat ccgttttggc aaagaccgca cgcgatgcag
     2401 aaatgtacgc actggcgcaa cgccatcccc aatacggttt cgacaaacac aaaggttacg
     2461 gcacgaagca gcatctggaa gccctcaaac aatacggcgt gctgcccgaa caccgccgag
     2521 acttcgcccc cgtcagaaac ctgctcgcgc agcaggcctt gttttaaacc ggcacaaaaa
     2581 tgccgtctga acttcagacg gcattttcag catcgcaact tcaaagagaa agaacccaaa
     2641 ccgtcattcc cgcgaaaaat agaaaatcaa aaaaaaacct aaaatccgtc attcccgcgc
     2701 aggcgggaat ccaatccgtc cggtttccgt tttttttgaa tttcaggtaa cttccaaacc
     2761 gccattcccg caaaagcggg aatctagaaa ctcaaagctg caagaattta tcaaaaatga
     2821 ctgaaactca aaaaaccgga ttcccgcgaa aacaggaatc cggagtctca gggttggaaa
     2881 aaccgttttt cccgataagt ttccgtaccg acagacctag attcccgcct gcacgggaat
     2941 gacgatattt cagttttgtg tttttgattt ttttgttttt gcgggaatga cgatatagtg
     3001 gattaacaaa aatca
//
LOCUS       DAWKOX010000193         2995 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.193, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000193 DAWKOX010000000
VERSION     DAWKOX010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2995
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.193"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            82..243
                     /locus_tag="WJK78_001868"
     CDS             82..243
                     /locus_tag="WJK78_001868"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598743.1"
                     /translation="MRWLNLKNSTSVHNTQGIRTKEAVEQGLRGNNRPEKGIGNRWNY
                     DGFIKELAK"
     gene            293..577
                     /locus_tag="WJK78_001869"
     CDS             293..577
                     /locus_tag="WJK78_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598744.1"
                     /translation="MKVITITLFTSCILSGCYGLEYGMSGGIPHDDWAIGSHVSQAKA
                     DAAWKECSDKYMRNGGSGLVEQCMNDKGLIRLSEIRRRQKRAETQRAVIK"
     gene            complement(702..1418)
                     /gene="trmB"
                     /locus_tag="WJK78_001870"
     CDS             complement(702..1418)
                     /gene="trmB"
                     /locus_tag="WJK78_001870"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ7598745.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDANFGSNRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1540..2943)
                     /locus_tag="WJK78_001871"
     CDS             complement(1540..2943)
                     /locus_tag="WJK78_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ7598746.1"
                     /translation="MNNPDLPYRQALERLSQKQYNFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGAPPETLISLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTSAKNNNPHGQYLLAQYCRYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDKAVYRFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHP
                     EGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLTAYQKLISDSALNHPDQYGGIK
                     DSAIRRQRAEQLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDKEKACRYLQEAINNGY
                     GQKSVLQELLQQWQNAV"
BASE COUNT          627 a          622 c          902 g          844 t
ORIGIN      
        1 atacgattaa agtaatgtcg gattcaagaa tccgacctac ggaaaactaa agattttata
       61 cgggctacgg cttgctggct tatgcgttgg cttaatttga aaaacagcac atcggttcat
      121 aatacacaag gtattagaac aaaagaagca gttgaacagg gattgcgtgg taataataga
      181 cctgaaaaag gaataggtaa tagatggaat tatgatggat ttataaagga attagcgaag
      241 taacaggtat tccaaatatt tctgataaat ataaagaaca aggagtaaaa aaatgaaagt
      301 aatcactatt acattgttta ctagctgcat actatctgga tgctatgggc ttgaatatgg
      361 aatgagtggc ggcattcctc atgatgactg ggcaataggt agccatgtta gtcaagccaa
      421 agcagatgct gcgtggaaag aatgttctga caaatatatg agaaatggtg gttcaggatt
      481 agtagaacaa tgtatgaatg ataaaggatt aatacgttta tctgaaatac gtcgtaggca
      541 aaagagagca gaaacacaaa gagcagtaat taagtaacaa taatgaaata ctactgttcc
      601 cgaacaaagc ggcatttacg caggtgatga cggctatatt ttgaaaaatg ccgtctgtaa
      661 gcaaacgtgc ttcagacggc atttttttat ccggcggtct gttatccgat ccgtttgaat
      721 accaagtccc aaacgccgtg tccgaggcgt ttgccgcgcg cttcgaattt ggtttcgggg
      781 cggtagtccg gggtgggggc gtagtctgcc gccgtatttt gcaggctgtc gaagctgctg
      841 aggacttcaa gcatctgctg tgcatattct tcccagtctg tcgccaggtg gatatagccg
      901 ccggttttga gtttgggcag cagtttggcg atgaaggggg cttgtatcag acggcgtttg
      961 tggtggcgtt ttttgtgcca cgggtcgggg aagaatatgt ggatgccgtc gagcgagccg
     1021 tcttgcagca tattttcgac aacttctacg gcgtcgtgcc gcatcacgcg gatgttttcc
     1081 aaatggtttt cttctatgag tttgagcagg ttgcctacgc cgggaccgtg tacgtcgatg
     1141 gcgagaaagt cggtttcggg cagcctgcgg gcgatttctg cggttgctgt ccccataccg
     1201 aagcctattt cgaggatttt ggggcggttg cttccgaaat tggcatcaag atcggccggt
     1261 gttgcttggt aatcgatgcc gaagctgtcc cataaggtat cgatggcgcg ttgctgcgcg
     1321 gcggtcatat ggctttggcg gaggacgaaa ctgcggatgc tgcggggatg tccggcttga
     1381 cggtcgtttg gtgtttggtt ttcggcggtg tctgtcataa tgcttccgtg cgcttgtgca
     1441 atcaggatgc cgtctgaatg tgaaaggcct gttcggacgg cgggaaggga aaggggcgat
     1501 tatacctgtt tcgtttcggc agggtaggtg taacgctgtt cagacggcat tttgccattg
     1561 ttgcagcagt tcttgcagga cgcttttttg cccgtatccg ttgtttatgg cttcttgcag
     1621 gtagcggcag gctttttctt tgtccggccc gacaccgtgt ccgctgtaat ggatgcaggc
     1681 gaggttgtag aacgccatac tgtctttttt tgcggcggct ttttcaaacc atttgcgtgc
     1741 ttcattgtag tcggcggtca taccctgtcc gaagtaatac atgctgccca gattggtttg
     1801 ggctttgctg tgtccgagtt ctgcggcttc tgtgtagagt ttgagcgcgg ctgcgtattc
     1861 gggcgcgcat tgtaatccgt aatgcagggc ttgggctttt tgataaagct gttctgccct
     1921 ttgccgccta atggcggaat ctttaatgcc gccgtattgg tcaggatggt ttaacgcgct
     1981 gtcggatatg agtttctgat aggcggtaag gctgccggct tcggctgcct gccggtaata
     2041 atgccgggct ttttccgtat cgggggctat gcccaaaccg tagcggcaga tgtcgcccag
     2101 tatccgcaaa ccttcgggat ggcgttcggc ggcggctgct tcggcgtgat gcagggcaag
     2161 tttgtagttt ctttccggat gcttgccttg caggtagatg tcggcaagtg cggcatgggc
     2221 atcggggtca ttttcctgtg cggcctgttg aaaccggtaa acggctttat cgggagccgt
     2281 aggtaggatg agctcggcaa gcggggtgta ggcgggaatg tatccttgtt gtgcggcggc
     2341 gcgcaaatga ttgatagctt gggtcgtgtc ggttggtgta ccttgtccga aacggtattg
     2401 aaggccgagc tgccattgtg ccgccgccaa gccttgtgct gcagcctcgc ggtagagcag
     2461 gtgtgccgtt tcaaaatccg gcggcgtgcc gtaccggcag tattgggcaa gcaggtattg
     2521 cccgtggggg ttgttgtttt ttgcgcttgt ttttgcccat ttcagggctt cttcaaaatg
     2581 tcgggacgca tacagcaggt acatcaggcg gacttgtgct tcaggcagcc cttcctctgc
     2641 taatggtctg taaagcgata tcagggtttc cgggggtgcg ccttccaatt cttggatata
     2701 tgccagattg taacgcgcgt agggatgtcc ctgttcggcg gcgatgcgga gcatttccat
     2761 accttgttcg cggtcttggt aggggctgtc cgcgtccatc aggtgttttg ccaactcgaa
     2821 tgcggcggcg ggatgacctg ccgaggccgc ttctgtcagc agtcggcgga cttcggtaaa
     2881 gttatattgt ttttgagaca ggcgttctaa ggcctgccga tagggtaagt cgggattgtt
     2941 catatcagat cgttttccgt tttgtcgaat catcgttatt gtgttatgaa gttag
//
LOCUS       DAWKOX010000194         2923 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.194, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000194 DAWKOX010000000
VERSION     DAWKOX010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2923)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2923)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2923
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.194"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            307..630
                     /locus_tag="WJK78_001872"
     CDS             307..630
                     /locus_tag="WJK78_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ7598747.1"
                     /translation="MQNETINPKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSVVLIELSD
                     PSEAV"
     gene            744..2921
                     /locus_tag="WJK78_001873"
     CDS             744..2921
                     /locus_tag="WJK78_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ7598748.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     HTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLAGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT          708 a         1039 c          740 g          436 t
ORIGIN      
        1 gaagctgcga tttcagaagc tccgttttca gacgaccttt tggaacacca caggcacacg
       61 catcgaacgg ctgaatcaaa gattcagacc gatggcagtc cgcacccgag tttatgcggc
      121 aaacagcgag gctacggcaa cccgtcccct ctccctgtgg gagagggtta gggagagggc
      181 ggtaagccgc aggcttacat caaagccgat aacgcttccg ttacaactcc gcccactgaa
      241 agcagcctgc aacgaagcca aaacgacaaa ccgcatcgta aaccacccaa cccataggag
      301 aaccccatgc aaaacgaaac catcaacccg aaacagcacc ttgccgccat caaagaatac
      361 tggcagcccg aaatcatcaa ccgccacggg ttccaattcc gcttggtcaa acttttgggc
      421 gattacggct ggcatacgca cggatacagc gacaaagtgc tgtttgccgt ggagggcgac
      481 atggcggtgg acttcgccga cggcggcagc atgacgatac gcgagggcga gatggcggtc
      541 gtgccgaagt cggtgtcgca ccgcccgcgt tcggaaaacg gctgctcggt ggtgctgatt
      601 gagttgtccg acccgtccga ggccgtctga aaacgaagtt tccgaaggaa gctgagtttc
      661 tgcgaagcta aaagcagcct gcaccttcaa tcaatatgcc gaaaatacaa ccccaccgca
      721 caccaacaca caaaggaaat cccatgacac gcttcaaata ttccctgctg tttgccgccc
      781 tgttgcccgt gtacgcgcag gccgatgttt ctgtttcaga cgaccccaaa ccgcaggaaa
      841 gcactgaatt gccgaccatc accgttaccg ccgaccacac cgcgagttcc aacgacggct
      901 acactgtttc cggcacgcac accccgctcg ggctgcccat gaccctgcgc gaaatcccgc
      961 agagcgtcag cgtcatcaca tcgcaacaaa tgcgcgacca aaacatcaaa acgctcgacc
     1021 gcgccctgtt gcaggcgacc ggcaccagcc gccagattta cggctccgac cgcgcgggct
     1081 acaactacct gttcgcgcgc ggcagccgca tcgccaacta ccaaatcaac ggcatccccg
     1141 ttgccgacgc gctggccgat acgggcaatg ccaacaccgc cgcctatgag cgcgtagaag
     1201 tcgtgcgcgg cgtggcgggg ctgctggacg gcacgggcga gccttccgcc accgtcaatc
     1261 tggtgcgcaa acgcccgacc cgcaagccat tgtttgaagt ccgcgccgaa gcgggcaacc
     1321 gcaaacattt cgggctgggc gcggacgtat cgggcagcct gaacaccgaa ggcacgctgc
     1381 gcggccgcct ggtttccacc ttcggacgcg gcgactcgtg gcggcagcgc gaacgtagcc
     1441 gcgatgccga actctacggc attttggaat acgacatcgc accgcaaacc cgcgtccacg
     1501 caggcatgga ctaccagcag gcgaaagaaa ccgccgacgc gccgctcagc tacgccgtgt
     1561 acgacagcca aggttatgcc accgccttcg gcccgaaaga caaccccgcc acaaattggg
     1621 cgaacagccg ccaccgtgcg ctcaacctgt tcgccggcat cgaacaccgc ttcaaccaag
     1681 actggaaact caaagccgaa tacgactaca cccgcagccg cttccgccag ccctacggcg
     1741 tagcaggcgt gctttccatc gaccacaaca ccgccgccac cgacctgatt cccggttatt
     1801 ggcacgccga cccgcgcacc cacagcgcca gcgtgtcatt gatcggcaaa taccgcctgt
     1861 tcggccgcga acacgattta atcgcgggta tcaacggtta caaatacgcc agcaacaaat
     1921 acggcgaacg cagcatcatc cccaacgcca ttcccaacgc ctacgaattt tcccgcacgg
     1981 gtgcctaccc gcagcctgca tcgtttgccc aaaccatccc gcaatacggc accaggcggc
     2041 aaatcggcgg ctatctcgcc acccgtttcc gcgccgccga caacctttcg ctgatactcg
     2101 gcggcagata cagccgttac cgcaccggca gctacgacag ccgcacacaa ggcatgacct
     2161 atgtgtccgc caaccgtttc accccctaca caggcatcgt gttcgacctg accggcaacc
     2221 tgtctcttta cggctcgtac agcagcctgt tcgtcccgca atcgcaaaaa gacgaacacg
     2281 gcagctacct gaaacccgta accggcaaca atctggaagc cggcatcaaa ggcgaatggc
     2341 ttgcaggccg tctgaacgca tccgccgccg tgtaccgcgc ccgtaaaaac aacctcgcca
     2401 ccgcagcagg acgcgacccg agcggcaaca cctactaccg cgccgccaac caagccaaaa
     2461 cccacggctg ggaaatcgaa gtcggcggcc gcatcacgcc cgaatggcag atacaggcag
     2521 gttacagcca aagcaaaacc cgcgaccaag acggcagccg cctgaacccc gacagcgtac
     2581 ccgaacgcag cttcaaactc ttcactgcct accactttgc ccccgaagcc cccagcggct
     2641 ggaccatcgg cgcaggcgtg cgctggcaga gcgaaaccca caccgaccct gccacgctcc
     2701 gcatccccaa ccccgccgcc aaagcccgcg ccgccgacaa cagccgccaa aaagcctacg
     2761 ccgtcgccga catcatggcg cgttaccgct tcaatccgcg cgccgaactg tcgctgaacg
     2821 tggacaatct gttcaacaaa cactaccgca cccagcccga ccgccacagc tacggcgcac
     2881 tgcggacagt gaacgcggcg tttacctatc ggtttaaata agg
//
LOCUS       DAWKOX010000195         2897 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.195, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000195 DAWKOX010000000
VERSION     DAWKOX010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.195"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            30..1247
                     /locus_tag="WJK78_001874"
     CDS             30..1247
                     /locus_tag="WJK78_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7598749.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSTGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTAIAIIGLANIAGCVF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            complement(1450..1590)
                     /locus_tag="WJK78_001875"
     CDS             complement(1450..1590)
                     /locus_tag="WJK78_001875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598750.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1603..2727
                     /locus_tag="WJK78_001876"
     CDS             1603..2727
                     /locus_tag="WJK78_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ7598751.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYHIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDSRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGDLERLAARDIIRFPGFVNNVSEVIKAHH
                     IFVLPSYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKM
                     IYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          680 a          862 c          684 g          671 t
ORIGIN      
        1 gcaaacttaa ccgactcaaa atacacatta tgacgcacac cgcatcgaaa acacccaaat
       61 tttggctgac catcaccgcc gccgcattca tcctgctgat taccatcggc atgaggatga
      121 cgctcggact gttcgtccaa cccgtcgtca acaccaccga attgagcatt gcccaattca
      181 gcctcatcat cgccgttttc caactgatgt ggggcatatc gcaaccattg tccggcgcgc
      241 ttgccgaccg tttcggcgcg ttcagggtat taagcggcgg cgccgtcctg ctcgtctgcg
      301 cctgcctgat tgcccccaac atcccgactt attgggggct gatgattgcc gtcgggctgc
      361 tgctcgcatt cggcaccggt tccggcggtt tctccatcat tatggggcag gtcgccgccc
      421 aagtccccgc acacaaacgc ggcttggcat ccggactggt caacgccggc ggttcgacag
      481 gacaattcct gttcgcaccg ctggttcaag gactcgtcgt cctgcccgaa gtcggctgga
      541 cgggcacatt ttacgtttgg ggcgcaatcg ccctgctgat tctgcctgtc tcatggtggc
      601 ttgccggcgg caacaacgcc gcccacaccc aacacgccca agccacacac ggacaaagcc
      661 tcggagaagc agtcaaaacc gccttcaaaa ccccaagcta catcctgctg cacctaagct
      721 tttttgcctg cggcttccac atcgcctttc tcgtaaccca cctacccacg gaagtcgccc
      781 tgtgcggact gcccgccacc gtcgcatcca cagccatcgc catcatcgga ctggcaaaca
      841 tcgccggttg tgtgttctca ggctggtgca caagccgcgt tcggggcaaa tacgtcctgt
      901 tcggactgta cgcctcgcgc gccgcgatga tactcatcta cattttttcg cccaagaccg
      961 acctcaactt ctacattttc gccgccgcac tcggatttac ctggctcgcc accgtcacgc
     1021 cgaccgcctc cattaccggc aaactcttcg gcacacgcta cctcgccacc ctgttcggac
     1081 tgacgatgct cagccaccaa atcggcggat tcctcggctc gtacatcggc ggcatcgtga
     1141 ttacacaatt cggcgactac ggctggatgt ggtacgccga cgcactgctg gcgggaaccg
     1201 ccgccctcct caacctcccc atccgcgaac cccgaaccgc cgcatgaaag aatgccgtct
     1261 gaaaaccctc agacggcatt ttccaaacac cccgcccgtt tccggactgc acgacacgca
     1321 aatcagcctt atcaaaccgc aaacaaccgc cgcgattaaa ccgccattca aataagtccg
     1381 ttttcccttc gggtgtaaaa tcatcacaaa acgcgatact gtatatcgcc gggcgttatg
     1441 cagcggattt caggataaaa tgccgtctga agccgcccct gcccgggcgg gcgaagcgtc
     1501 ggatgcggtg cgcttggcaa aggtttgccc gccgcgcccc gtatccggca tttcatcaat
     1561 gcagaccgca tttccaatcc tataattcaa ggtgtccgcc ttatgaaaat cgtttttatc
     1621 acaacagtcg catccagcat ttacggtttc cgcgcccccg tcattaaaaa attaatcggc
     1681 aaaaaccatc aggtgtatgc ctttgtatcg gagttttccg ataatgaatt ggatattatc
     1741 agggaaatgg gggttacacc cgttacctac cgttcaaacc gcagcgggct gaacccgttt
     1801 tccgatataa aatccacctt cctcatattt aaagaactca aaaaaatatc gccggatttg
     1861 gttttccctt atttcgcaaa acccgtgatt ttcggcactt ttgccgcaaa actggcaggc
     1921 gtgcccagaa tcgtcgggat gctggaaggt ttgggattcg catttacccc gcagccggaa
     1981 ggcataccgt taaaaacaaa aatcataaag gggattttga ttgccttgta ccacattgcc
     2041 ctgccgatgt tggaaagcct gattgtatta aaccccgacg acaaagacga actgacggac
     2101 aaatacggca tcaaaataaa aaacatccat attttgggcg gaatcggtct ggattcgcgg
     2161 caatatcctt attccgaggc ggatattccc gatgaaaaag aacccgtaaa attcctcttt
     2221 atcggcagat ttctgaaaga aaaggggatt gatgatttta ttcgggcggc ggaacaggtt
     2281 aaggacaaat accccgatac ggtttttacc gctttgggcg caatcgacaa atcacgcggg
     2341 gggggcgatt tggaacggct tgccgcccgc gatattatcc gtttccccgg ttttgtgaac
     2401 aatgtttccg aagtgataaa ggcgcatcat atattcgtat tgccgtctta tagggaaggc
     2461 gttccccgaa gcactcagga ggcaatggcc gtcggcaggg cagtgattac gacggatgtc
     2521 cccggatgca gggaaacggt cgccgacaag gtcaacggct tcctgatcga gccttggaat
     2581 ccccgcatct tagccgaaaa aatgatttat tttatcgaaa acagggaagc cgtccgcctg
     2641 atggggaatg caagttatgc gattgccaaa gataaattcg atgccgaaaa agtcgatttg
     2701 aaattgctcg atattttgaa ggcgtaaaca aggctgcccg cttttgagtt tcggtcattt
     2761 ctgataaacc cccgtcattc ccgccacacc cccgtcattc cctcgaaagc gggaattcag
     2821 gttcgtttag tttcggtcat ttccgataaa ttcttgcaac tttgcgtttc tagattccca
     2881 ctttcgtggg aatgacg
//
LOCUS       DAWKOX010000196         2846 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.196, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000196 DAWKOX010000000
VERSION     DAWKOX010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.196"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..529)
                     /gene="greA"
                     /locus_tag="WJK78_001877"
     CDS             complement(53..529)
                     /gene="greA"
                     /locus_tag="WJK78_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ7598752.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            921..2222
                     /gene="aroA"
                     /locus_tag="WJK78_001878"
     CDS             921..2222
                     /gene="aroA"
                     /locus_tag="WJK78_001878"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ7598753.1"
                     /translation="MTESLRLPAASLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYRLHGVARMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGERQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVIN
                     EGYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIATTPVRVTGIGANSIQGDVA
                     FACELEKIGADVVWGENFVEVSRPKERAVQAFDLDANHIPDAAMTLAVVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVAEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLVSLLDVPVVINDPKCTHKTFPTYFEVFSSLTETAE"
     gene            complement(2265..2798)
                     /locus_tag="WJK78_001879"
     CDS             complement(2265..2798)
                     /locus_tag="WJK78_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ7598754.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          601 a          784 c          767 g          694 t
ORIGIN      
        1 ttaatccact ataatttcct gcgtgtgtcg ggtgtatcga aatcaagccg aatcaaatat
       61 atcggacttc gataatgtcg tattcgcgca cgccgcccgg ggcttggact tccgccgtat
      121 cgccctcttc cttgccgatt aaggcgcggg caatcggtga gccgacatag attttgccct
      181 gtttgatatc cgcttcgtct tcgccgacaa tttggtaggt aacgtgttct tccgtttcca
      241 aatcttccag cgtaaccgtc gtaccgaaca cgattttgcc ttcggcgtgg atttcggtcg
      301 gattgatgat gtgggcaacg gaaagtttgt gttccagctc ggaaatgcgg ccttcgataa
      361 agccttggcg ttctttggcg gcttcatatt cggcgttttc ggacaaatcg ccgtgcgatc
      421 tggcttcagc aatcgcttcg atcacttcgg ggcgcgccac gcttttaagc tgctgcaatt
      481 cctgtttcag caattccgca ccgcgtacgg tcagggggat tttttgcatc ggtctttttt
      541 ctccatattc cggcacaccg gtttgcggca gcaaacatac cgcataccgt cttgttttgt
      601 gcgtccggat attaaaataa aaacacaagc cgcccggaaa atcggcggct tgtctgtcgt
      661 tgaacagcgg ctattctacc aaattctatg aaattggcaa tcgtgccgtg ccgtccgcaa
      721 acacgctatg tccgcaacaa aagccgaaaa tatgccggca aaaaaatttt agaaacaaaa
      781 aatttaaaaa taatcaattt tcggcacaaa aaaccatatt cacggacttt aaaaccgaaa
      841 atgccaaacc tgagattttt cagacggcat ttgcaccagt ataatgcagg ctgtttttat
      901 ctttatattt acgttttgcc atgaccgaat ccctccgcct ccctgccgcc tcgctcaaac
      961 cttccactgt cgccctgccc ggctccaaaa gcatcagcaa ccgcaccctg ctgcttgccg
     1021 ccttgtccga caatgcttgc gaaatccatt ccctgctcaa atccgacgat accgaccgta
     1081 tgctcgaagc actcgataaa ctcggcgttg aaatcgaata tcttgccgaa gaccgtctga
     1141 aagtgcacgg cacaggcgga cgcttcccca accgcactgc cgatttgttt ttgggcaacg
     1201 cgggcacggc gttccgcccg ctgaccgccg cgcttgccgt tttgggcggc gattatcgcc
     1261 tgcacggcgt tgcgcgtatg cacgaacgcc ccatcggcga tttggccgat gcactgcgga
     1321 ttgccggcgc cgatgtcgaa tatctcggca aggaacacta tccgccgctt catatcggcg
     1381 aacgccaaga caacggcgag cgcgtgattc cgattaaagg caatgtatcc agccagtttc
     1441 tgaccgccct tttaatggcg ttgccgctga ccgggcaggc gtttgaaatc cgtatggtcg
     1501 gcgagttaat ttccaagccc tatatcgaca ttactttaaa actgatggcg caattcggcg
     1561 tacaggttat caatgaaggc taccgcgtct tcaaaattcc cgccgatgcg cactatcacg
     1621 cgcccgaaca cttgcacgtc gaaggcgatg cctccagcgc gtcctacttc ctcgcagccg
     1681 gtttgattgc caccacgccc gtccgcgtta ccggtatcgg cgcaaacagc atacagggcg
     1741 atgtcgcctt tgcctgcgag ctggaaaaaa tcggtgcgga cgtggtttgg ggcgaaaact
     1801 tcgtcgaagt ctcgcgcccg aaagaacgtg ccgtccaagc ctttgatttg gatgcaaacc
     1861 atatccccga tgccgccatg accctcgccg tcgtcgcgct tgctacaggg caaacctgca
     1921 cgcttcgcaa catcggttcg tggcgcgtca aagagaccga ccgcattgcc gcaatggcga
     1981 acgagttgcg caaactcggt gcaaaagtcg ccgaagaagc cgaagcaatt cacatcaccc
     2041 cgcccgaaac gccgacaccc gacgccgtca tcgacactta cgacgaccac cgcatggcaa
     2101 tgtgtttctc gctggtttcg ctgttggacg tacccgtcgt catcaacgat ccgaaatgca
     2161 cccacaaaac cttcccgact tattttgaag tgttctcatc gctgaccgaa acagcggaat
     2221 aaggcggcat tttgccgtga ttccggcgca gcgcggcggg cggctcattc tgtaaaaaaa
     2281 gtatgtgcgc cgaggtagtt tttggcgtaa aacggtgtgg agagtttttc ggttttgatg
     2341 gttttgccgc tgctgggggc atggatgaat tcgccgttgc cgatatagag tccgacgtgt
     2401 gagtagcggt gtgtgccgcc ggtgttgaag aatacgaggt cgccggcctt aaggcggctg
     2461 tcggggattt tgcggcttgc cgccgccatg tcgcgggcgg tgcgcggcag cttgacgttg
     2521 agggcgtttt tgtaaacgaa ttgaatcatg ccgctgcaat cgaagccggt tgcggtgctg
     2581 ctgccgcccc atttgtaggg cgtgccgatg agtccgaggc tgtggagcat gagttcctgc
     2641 gagccttgtg tgcggtcgat gtggctgatg cggacggctt ggatttgccg gactgtctgt
     2701 ttgggtttcg gttggcggtg tttgccggag gtcgtgccgc atgaggcgag gagcagtgcg
     2761 ctgagacaga ggaaaagggt tttgtcgggg ggaaacatgg tttttccttt gcgggttcgg
     2821 atatccgtct gaaggcgttt cagacg
//
LOCUS       DAWKOX010000197         2784 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.197, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000197 DAWKOX010000000
VERSION     DAWKOX010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2784
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.197"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            108..671
                     /gene="gmhB"
                     /locus_tag="WJK78_001880"
     CDS             108..671
                     /gene="gmhB"
                     /locus_tag="WJK78_001880"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ7598755.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            701..1444
                     /locus_tag="WJK78_001881"
     CDS             701..1444
                     /locus_tag="WJK78_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ7598756.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPYASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            1441..2133
                     /locus_tag="WJK78_001882"
     CDS             1441..2133
                     /locus_tag="WJK78_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ7598757.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHGRQLALTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPAPSSLTSAKTFWGV
                     CRKTTGIRFNWRLVGAPEYVADYVCIHELCHLAHADHSRAFWALTRRFAPYTPEAKQW
                     LKIHGRELFALG"
     gene            2091..2411
                     /locus_tag="WJK78_001883"
     CDS             2091..2411
                     /locus_tag="WJK78_001883"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598758.1"
                     /translation="MAQNPRQGTFRLRLTRPGQASANSDLLPNGHPESSITAGDTYRC
                     RRFQTASVPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHHSSETRNPPGPTCGM
                     KRLS"
BASE COUNT          670 a          925 c          668 g          521 t
ORIGIN      
        1 accgtactgg tttttgttaa tccactatat cacgcggcac aggcgcatca ctgccgatat
       61 ttcagtataa tgccaccccc gacctgcccc aacccaaagg aaacgcgatg aaactcatca
      121 ttctcgaccg cgacggcgtc atcaatcagg accgcgatga cttcgtcaaa tccgttgacg
      181 agtggatacc tgtcgaaggc agcatggatg cggtggcatt tctgacgcag gcaggctaca
      241 ccgtcgccgt tgccaccaac caatccggca tcgggcgcaa atattttacc gttcaaaacc
      301 ttaccgaaat gcacgccaaa atgcaccgcc tcgtccgtca ggcaggcggc gaaatcaacg
      361 gcatctggtt ctgcccgcac accgatgccg acaactgcaa ctgccgcaag cccaaaccgg
      421 gtatgattga agacatcatc ggacgcttca acgcccaagc ctcggaaacc tggctggtcg
      481 gcgacagcct gcgcgatttg caggcaatcg atgccgtcgg cggaaaaccc gcgctggttc
      541 tgaccggaaa aggcaaaaaa acgctctccc aacacggaca cgaattaccc gaacacacac
      601 aggttttcga taccttgctc gatttctcac aatacatcat gcaggaaaac gccgcaccgc
      661 aagccgactg aacataccgc atttccgaca aggcaaaacc atgctcatca tccgcaacct
      721 gatttactgg ctgatactct gttccaccct gattttcctc tttcccttta tgctgctcgc
      781 ctcgcctttc cgagacgggg cgcacaagat ggcgcgggtc tgggtcaaaa tcctcaacct
      841 ctcgctcaaa cacatcgtcg ggctcaaata ccgcatcatc ggcgcggaaa acatccccga
      901 ccgccccgcc gtcatctgcg ccaaacacca aagcggctgg gaaacgctcg cccttcagga
      961 catttttccg ccgcaggttt acgttgccaa acgcgagttg ttcaaaatcc cctttttcgg
     1021 ctggggcttg aaactggtca aaaccatagg catagaccgc aacaaccgcc gcgaagccaa
     1081 cgagcagctc ataaaacagg ggttggcgcg caaaaacgaa ggctattgga ttaccatttt
     1141 ccccgaaggc acgcgccttg cacccggaaa gcgcggcaaa tacaaactcg gcggcgcgcg
     1201 catggcgaaa atgtttgaga tggacatcgt ccccgtcgcc ctcaacagcg gcgaattttg
     1261 gccgaaaaac tcctttctga aatatccggg ggaaatcacc gtcgtcatct gtccgaccat
     1321 cccgtacgca agcggcagcg aagccgaatt gatgggaaaa tgcgaacacc tcatcgaaac
     1381 gcagcagccg ctcatttccg gcgcaggccc gtttgccgcc aaaatgccgt ctgaaaccgc
     1441 atgaccgcct ttgtccacac cctttcagac ggcatggaac tgaccgtcga aatcaagcgc
     1501 cgtgccaaga aaaacctgat tatccgcccc gccggcacac ataccgtccg catcagcgtc
     1561 ccaccctgct tctccgtctc cgctctaaac cgctggctgt atgaaaacga agccgtcctg
     1621 cggcaaacac tggcgaaaac accgccgccg caaactgccg aaaaccggct gcccgaatcc
     1681 atcctcttcc acggcagaca gcttgccctc accgcccatc aagacacgca aatcctgctg
     1741 atgccgtctg aaatccgtgt tcccgaaggc gcacccgaaa aacagcttgc gctgctgcgg
     1801 gactttttgg aacggcaggc gcacagttac ctgattcccc gcctcgaacg ccacgcccgc
     1861 accacacaac tgttccccgc cccctcctcg ctgacctctg ccaaaacctt ctggggcgtg
     1921 tgccgcaaaa ccacaggcat acgcttcaac tggcggctgg tcggcgcacc ggaatacgtt
     1981 gccgactatg tctgcataca cgaactctgc cacctcgccc acgccgacca cagccgcgcg
     2041 ttctgggcac tgacccgccg cttcgcaccc tacacgcccg aagcgaaaca gtggctcaaa
     2101 atccacggca gggaactttt cgccttaggc tgacgcggcc cgggcaggca tccgccaatt
     2161 cagacctcct cccaaacgga catccggaaa gcagcatcac agccggcgac acataccgct
     2221 gccgccgctt tcagacggca tccgtgccgg aacaggcacg cgcccgcccg attcaaaccg
     2281 cgatgacgct ttgccgccgg ttcggggcag gatggcggca cacacgccgt ctgccgcgtt
     2341 tcatttcaca ccactcttcc gaaacccgaa acccgcccgg tccgacgtgc ggtatgaaac
     2401 gcttaagctg acgcgaagtc ttttactgat ttgcccgcga aaatgccgtc tgaaaggttt
     2461 tcggacggca tttttttgcg tttcccagga tggcggcgga ttcgtaaaag gcggtcaggg
     2521 tggattgtag gatgggttga gacctgccga atccgccgca tctgccaaat ctaccgccgt
     2581 cattcctacg aaagtgggaa tctagaacgc ggggttaaga aaacctgcac cgcgtcattc
     2641 ccacgaacct acatcccgtc attcccacga aagtgggaat ccagaacgta aaatctgaag
     2701 aaaccgtttt acccgataag tttccgcacc gacagaccta gattcccgcc tgcgcgggaa
     2761 tgacgggatt tgaggtttct gttc
//
LOCUS       DAWKOX010000198         2750 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.198, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000198 DAWKOX010000000
VERSION     DAWKOX010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.198"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            111..842
                     /locus_tag="WJK78_001884"
     CDS             111..842
                     /locus_tag="WJK78_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ7598759.1"
                     /translation="MSREINAGRHHFLYGGISGGGVHYWDNKDFSEQSLRLSFGYKNR
                     SVTRSFGIVPFVEQNLLGGSRYNFVGGFNADFSQRLSERWRLTLNAGNMWKHYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHNITKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTIVYRFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNMQIFMSVEKDFK"
     gene            959..2467
                     /gene="ppx"
                     /locus_tag="WJK78_001885"
     CDS             959..2467
                     /gene="ppx"
                     /locus_tag="WJK78_001885"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ7598760.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSASSQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDSAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEVV"
BASE COUNT          696 a          798 c          696 g          560 t
ORIGIN      
        1 ctataaacaa cgcttcgtcc aaaaaaacga ttgaatttgc gggcagaagc tggacgaaaa
       61 ccgccgacag cctgccgcaa aaggcacacg gtttgcgcta gggcttaggc gtgtcgcgcg
      121 aaatcaatgc gggcaggcat catttcctct acggcggcat cagcggcggc ggcgtgcatt
      181 attgggataa caaagatttc agcgaacaga gcctgcgcct gtcgttcggc tataaaaacc
      241 gttcggtaac gcgctcgttc ggcatcgtgc cgtttgtcga gcaaaacctc ttaggcggca
      301 gccgatacaa tttcgtcggc ggcttcaatg ccgatttctc ccaacgcttg agcgaacgct
      361 ggcggttgac actaaacgcg ggcaatatgt ggaagcatta tcaggaagac cgcaccgccg
      421 cccgatacga cagccatatg ccgctggcgg gcgcgacgct gatgtattcc gcgccgaaag
      481 actggctgct ttacggcggt gcggactggt cgcacaacat aacgaaagag gcggaacagg
      541 cttccatccg caagggtttg cgtgtcggcg cggtcaaaac gttcgacggc gggctgggtc
      601 tgcgggcaaa cctgcgctat acccgcagga cgtttgatgc acccgggacc attgtgtacc
      661 gcttcccgcg taaagaccac gaatatcagg caaacctgtc gttgtggcac gacaaaatct
      721 cttggaaggg atttacgccg caactcaatt tccgctatct gaaaatcgac agcaatatga
      781 aaagttttta cacacgcaaa aacatgcaga ttttcatgag cgtggaaaag gatttcaaat
      841 aagcgcaaaa aatgccgtcg gcaacatccg tgagcagaat caaaaacagc cgcatcattt
      901 attgtcaacg cctgcgccgt cagagtaaca ttgcgttttt cccccaccga tatccgccat
      961 gaccaccacc cccgcaaaca tcctcgcctc cgtcgatttg ggttccaaca gtttccgcct
     1021 ccagatttgc gaaaacaaca acggacaatt aaaagttatc gattccttca aacagatggt
     1081 gcgcttcgcc gccggtctgg acgaacagaa aaacctcagc gcatcctcac aggaacaggc
     1141 tttagactgc ctagcaaaat tcggcgaacg cctgcgcggc ttccgccctg aacaggtacg
     1201 cgccgtggca accaatacat tccgcgtcgc caaaaacatc gcagatttcc ttcccaaggc
     1261 cgaagcggca ctgggtttcc ccatcgaaat catcgcaggg cgcgaagagg cgcggctgat
     1321 ttataccggc gtgatccaca ccctcccccc gggcggcggc aaaatgctgg ttatcgacat
     1381 cgggggcggt tcgacagaat ttgtcatcgg ctcgacgctg aatcccgaca ttaccgaaag
     1441 cctgcccttg ggctgcgtaa cctacagcct gcgcttcttc caaaacaaaa tcaccgccaa
     1501 agacttccaa tctgccattt ccgccgcccg caacgaaatc cagcgcatca gcaaaaatat
     1561 gaggcgcgaa ggttgggatt ccgccgtcgg cacatcgggt tcggcaaaat ccatccgcga
     1621 cgtgcttgcc gccgaaatgc cccaagaggc ggacattacc tacaaaggca tgcgcgccct
     1681 cgccgaacgc atcatcgaag ccggttcggt caaaaaagcc aaatttgaaa acctgaaacc
     1741 ggaacgcatc gaagtttttg ccggcggact tgccgtgatg atggcggcgt ttgaggaaat
     1801 gaaactcgac aggatgaccg taaccgaagc cgccctgcgc gacggcgtgt tttacgattt
     1861 gatcgggcgc ggtttaaacg aagatatgcg cggacaaacg gttgccgagt tccaacaccg
     1921 ctaccacgtc agcctcaatc aggcgaaacg caccgccgag accgcgcaaa cctttatgga
     1981 cagcctctgc cacgctaaaa acgttacagt tcaagagctt gccttgtggc aacagtatct
     2041 cggacgcgcc gccgcgctgc acgaaatcgg tttggacatc gcccacaccg gctatcacaa
     2101 gcattccgcc tacatcctcg aaaacgccga tatgccgggt ttctcacgca aagaacagac
     2161 catacttgcc caactggtca tcggtcatcg cggcgatatg aaaaaaatga gcggcatcat
     2221 cggcaccaac gaaatgttgt ggtatgccgt tttgtccctg cgccttgctg ccctgttctg
     2281 ccgttcgcgc caagacctgt ctttcccgaa aaatatgcag ttgcgcacgg atacggaaag
     2341 ctgcggcttc atcctgcgta ttgacaggga atggctggaa cgccatcccc tgattgccga
     2401 cgcattggaa tatgaaagcg tccaatggca aaaaatcaat atgccgttta aagtcgaggt
     2461 cgtctgaacc ttacggaaca aatgccgtcc aaaccctgtc cagacggcat ttgcctgtcc
     2521 gcaacatccc gatatgcgcg gcacatctgc tcggaacggt catgcaggcg taaaaaacaa
     2581 ggggcataca actcaaaaac cgcctgaaaa tcttcaggcg gtttcgtttg ggttgccggc
     2641 aggcggcatc ccatcatttt tgccaaggca acaaattatt tggcggcatc tttcattttg
     2701 tctgccgctt cctgagtcgc gtcggcagct ttgttcaaag tatctttagc
//
LOCUS       DAWKOX010000199         2633 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.199, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000199 DAWKOX010000000
VERSION     DAWKOX010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2633
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.199"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            45..605
                     /locus_tag="WJK78_001886"
     CDS             45..605
                     /locus_tag="WJK78_001886"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598761.1"
                     /translation="MIESIEKPQESIRKNRNPHRVIPAQAGIQKRNATGIYRKKQKPP
                     PRHSRAGGNPETQRGRTLSEKTETLTTVIPAQAGIQKRNATGIYQKKQKPHRPSFPRR
                     RESRNTTRQDFIGKNRNPTDRHSRKSGNPATEKPQESISKNRNPTAVIPAKAGIQTRR
                     HGNLPNKTVSLDSTSQIPAFAGMTRF"
     gene            717..2519
                     /locus_tag="WJK78_001887"
     CDS             717..2519
                     /locus_tag="WJK78_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HEZ7598762.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLS
                     ATVQANATDEEDDEELEPVVRTAPVLSFHSDKEGTGEKEEVGASSNLTVYFDKKGVLK
                     AGTITLKAGDNLKIKQNTNENTNENTNASSFTYSLKKDLTDLTSVGTEKLSFSANGNK
                     VNITSDTKGLNFAKETAGTNGDTTVHLNGIGSTLTDTLLNTGATTNVTNDNVTDDEKK
                     RAASVKDVLNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGK
                     KTEVKIGAKTSVIKEKDGKLVTGKDKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKT
                     TTANGQTGQADKFETVTSGTKVTFASGNGTTATVSKDDQGNITVKYDVNVGDALNVNQ
                     LQNSGWNLDSKAVAGSSGKVISGNVSPSKGKMDETININAGNNIEITRNGKNIDIATS
                     MTPQFSSVSLGAGADAPTLSVDDEGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQL
                     KGVAQNLNNRIDNVDGNARAGIAQAIATAGLAQAYLPGKSMMAIGGGTYRGEAGYAIG
                     YSSISDTGNWVIKGTASGNSRGHFGTSASVGYQW"
BASE COUNT          849 a          666 c          634 g          484 t
ORIGIN      
        1 ttcgcgggaa tgacgagatt ttagattatg ggaatttatc aggaatgatt gaatccatag
       61 aaaaaccaca ggaatctatc agaaaaaaca gaaaccccca ccgcgtcatt cccgcgcagg
      121 cgggaatcca gaaacgcaac gcaacaggaa tttatcggaa aaaacagaaa cccccaccgc
      181 gtcattcccg cgcaggcggg aatccagaaa cacaacgcgg caggacttta tcggaaaaaa
      241 cagaaaccct caccaccgtc attcccgcgc aggcgggaat ccaaaaacgc aacgcaacag
      301 gaatttatca gaaaaaacag aaaccccacc gaccgtcatt cccgcgcagg cgggaatcca
      361 gaaacacaac gcggcaggac tttatcggaa aaaaccgaaa ccccaccgac cgtcattccc
      421 gcaaaagcgg gaatccagca accgaaaaac cacaggaatc tatcagcaaa aacagaaacc
      481 ccaccgccgt cattcccgca aaagcgggaa tccagacccg tcggcacgga aacttaccga
      541 ataaaacagt ttccttagat tccacgtccc agattcccgc cttcgcggga atgacgagat
      601 tttaagttgg gggaatttat cagaaaaccc ccaaccccaa aaaaccgggc ggatgccgca
      661 ccatccgccc ccaaaccccg atttaaccat tcaaacaaac caaaagaaaa aacaaaatga
      721 acaaaatata ccgcatcatt tggaatagtg ccctcaatgc ctgggtcgtc gtatccgagc
      781 tcacacgcaa ccacaccaaa cgcgcctccg caaccgtggc gaccgccgta ttggcgacac
      841 tgctgtccgc aacggttcag gcgaatgcta ccgatgaaga agacgatgaa gagttagaac
      901 ccgtagtacg cactgctccc gtgttgagct tccattccga taaagaaggc acgggagaaa
      961 aagaagaagt aggagcaagt tcaaatttga cagtatattt cgacaagaaa ggagtactaa
     1021 aagccggaac aatcaccctc aaagcaggcg acaacctgaa aatcaaacaa aacaccaatg
     1081 aaaacaccaa tgaaaacacc aatgccagta gcttcaccta ctcgctgaaa aaagacctca
     1141 cagatctgac cagtgttgga actgaaaaat tatcgtttag cgcaaacggc aataaagtca
     1201 acatcacaag cgacaccaaa ggcttgaatt ttgcgaaaga aacggctggg acgaacggcg
     1261 acaccacggt tcatctgaac ggtattggtt cgactttgac cgatacgctg ctgaataccg
     1321 gagcgaccac aaacgtaacc aacgacaacg ttaccgatga cgagaaaaaa cgtgcggcaa
     1381 gcgttaaaga cgtattaaac gcaggctgga acattaaagg cgttaaaccc ggtacaacag
     1441 cttccgataa cgttgatttc gtccgcactt acgacacagt cgagttcttg agcgcagata
     1501 cgaaaacaac gactgttaat gtggaaagca aagacaacgg caagaaaacc gaagttaaaa
     1561 tcggtgcgaa gacttctgtt attaaagaaa aagacggtaa gttggttact ggtaaagaca
     1621 aaggcgagaa tggttcttct acagacgaag gcgaaggctt agtgactgca aaagaagtga
     1681 ttgatgcagt aaacaaggct ggttggagaa tgaaaacaac aaccgctaat ggtcaaacag
     1741 gtcaagctga caagtttgaa accgttacat caggcacaaa agtaaccttt gctagtggta
     1801 atggtacaac tgcgactgta agtaaagatg atcaaggcaa catcactgtt aagtatgatg
     1861 taaatgtcgg cgatgcccta aacgtcaatc agctgcaaaa cagcggttgg aatttggatt
     1921 ccaaagcggt tgcaggttct tcgggcaaag tcatcagcgg caatgtttcg ccgagcaagg
     1981 gaaagatgga tgaaaccatc aacattaatg ccggcaacaa cattgagatt acccgcaacg
     2041 gtaaaaatat cgacatcgcc acttcgatga ccccgcagtt ttccagcgtt tcgctcggtg
     2101 cgggggcgga tgcgcccact ttaagcgtgg atgacgaggg cgcgttgaat gtcggcagca
     2161 aggatgccaa caaacccgtc cgcattacca atgtcgcccc gggcgttaaa gagggggatg
     2221 ttacaaacgt cgcacaactt aaaggtgtgg cgcaaaactt gaacaaccgc atcgacaatg
     2281 tggacggcaa cgcgcgtgcg ggcatcgccc aagcgattgc aaccgcaggt ttggctcagg
     2341 cgtatttgcc cggcaagagt atgatggcga tcggcggcgg tacttatcgc ggcgaagccg
     2401 gttacgccat cggctactcg agcatttctg acactgggaa ttgggttatc aagggcacgg
     2461 cttccggcaa ttcgcgcggt catttcggta cttccgcatc tgtcggttat cagtggtaag
     2521 ggctttttcg cctgtctgct gttggggcag gcggaaggtt tgaagggaag ggtggcgatt
     2581 tgccgcctga gacctttgca aaattcccca aaatccccta aattcccacc aag
//
LOCUS       DAWKOX010000200         2593 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.200, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000200 DAWKOX010000000
VERSION     DAWKOX010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2593
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.200"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..126
                     /locus_tag="WJK78_001888"
     CDS             <1..126
                     /locus_tag="WJK78_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ7598763.1"
                     /translation="AGMAGLSGQISLTVPVLLTAQVLWVIIPLVLAAGIFRKRQI"
     gene            123..617
                     /locus_tag="WJK78_001889"
     CDS             123..617
                     /locus_tag="WJK78_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ7598764.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(705..2366)
                     /locus_tag="WJK78_001890"
     CDS             complement(705..2366)
                     /locus_tag="WJK78_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ7598765.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSETGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTKKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GVGKDGEPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGMKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMIAAEAVFPLLEHLEEAEGFDSGKEAADYQQRFEQSWLYRELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHYGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
BASE COUNT          574 a          687 c          678 g          654 t
ORIGIN      
        1 gcgggtatgg cgggtttgag cggacaaatc agcctgaccg tccccgtttt gctgaccgct
       61 caggttttat gggttatcat tccgcttgtt ttggcagccg gaatttttag aaagcgacaa
      121 atatgaaaaa aaccctgttg gcaattgttg ccgtttccgc cttaagtgcc tgccggcagg
      181 cggaagaggg accgccgcct ttaccccggc agattagcga ccgttcggtc ggacactatt
      241 gcagtatgaa cctgaccgaa cacaacggcc ccaaagccca gattttcttg aacggcaaac
      301 ccgatcagcc cgtttggttc tccaccatca agcagatgtt cggctatacc aagctgcccg
      361 aagagcctaa aggcatccgc gtgatttacg ttaccgatat gggcaatgtt accgattgga
      421 cgaatcccaa tgccgacacg gagtggatgg atgcgaaaaa agccttttac gtcatcgaca
      481 gcggctttat cggcggtatg ggtgcggaag acgcgctgcc gttcggcaac aaggaacagg
      541 ctgaaaaatt tgcaaaggat aaaggcggta aggttgtcgg tttcgacgat atgcctgata
      601 cctatatttt caaataatat tgaaaaaacc ggccgaaact ttaaaaacga gtttcggtcg
      661 gtttttcttt tcttgttcgg tatagtgtcg gcaggaaaga accttcacat cccgccgtaa
      721 ttcggcccgc tcgcgccttc ggggcaaatc caagtgatgt tttgcgtcgg gtctttgatg
      781 tcgcaggttt tgcagtgcac gcagtttgcc gcgttgattt gcaggcgcgg attgccgttt
      841 tcttcaacaa tttcgtacac gccggccgga caatagcgcg tttcgggcga ggcgtattct
      901 ttgtagttca cgtctatcat cgtttgcgga ttgttcagca ccaaatggtc gggctggttt
      961 tcttcgtgcg cgagattggc aaggaagacg ctgctcaagc ggtcgaaggt caacacgccg
     1021 tcgggtttcg gataatcaat cggtttgcac gcggcggctt ttttgagctg ctcgttgtct
     1081 ttgccgtaat gtttcaaggt ccacggggct ttgcctctga aaatcatctg gtcgatgccg
     1141 gtatagattg agccgaggta aacgccccat ttgaatgacg gacggacatt gcgcgcggcg
     1201 taaagctctc gatacagcca gctttgttca aaacgttgct gataatccgc cgcttctttg
     1261 ccgctgtcga aaccctccgc ttcttcaagg tgttccaaca aggggaacac ggcttcggcg
     1321 gcgatcatag cggatttcat cgcggtatgg atgcctttga tgcgcggcat attgaggaaa
     1381 cctgccgcat cgccgattaa aacgccgcct ttgaacgaga gcttcggcaa actttgcaaa
     1441 ccgccttcaa tcagcgaacg cgcgccgtaa gcaatgcggc ggccgccttc aaaggttttg
     1501 cggatttcgg gatgggtttt gaaacgttgg aactcttcaa acggcgacag ataaggattt
     1561 tgatagtcca aaccgaccac gaagccgacg gcgactttgt tgtcgtcgaa atggtaaaca
     1621 aacgcgccgc cgtaggtttt gctgtccagc ggccagcctg cgctgtgcac caccaaaccg
     1681 ggctgatgct gttcggacgg cacttcccaa acttctttca tgcccaagcc gtaagtttgc
     1741 ggctggctgt tttggtcgag tttgaagcgt tcgatgattt gtttggaaag cgaacctcgg
     1801 cagccctcgg caaacagggt ttgccgtgcc caaagctcca tgccgggctg gaatgaatcg
     1861 gtcggctcgc cgtctttgcc cacgcccata ttgccggtcg caatgccttt gaccgaaccg
     1921 tcttcgtgat acagtacttc ggcagcggca aagccaggat agatttccac gcccatattt
     1981 tccgcctgct ccgccaacca gcgcacgact tcgcccaagc tgacgatgta gttgccgtga
     2041 ttgtcgaaat tcggggtaat aggcagattg aacgcctttt tcttagtcag gaacaatact
     2101 ttgtcctgcg ttaccgtacg cgtcagcggc gcgccttttt ctttccaatc gggaatcagc
     2161 tcgttcagcg caatcggatc gataaccgcg cccgccagcg aatgcgcgcc cgtctcagaa
     2221 cctttctcca ccacgcaaac gctgatttcg cgcccgtttt gttcggcaag ctgcttgagt
     2281 ttgatggcgg cagacaaacc cgacgggcct gcgccgacaa tcacgacatc gtattgcata
     2341 ctgtcgcggg tgatggattc tgtcatggcg gttcctgtgt atttattatt gaattgcaaa
     2401 tccgtaatta tacaacggga acatatagtt accaaataca acaaaggtcg tctgaaaacc
     2461 atattttcgg ttttcagacg acctttgtcg aaatttcaat aagcacgcca ccattttacc
     2521 tgtccgaccg caaactccgt ctgacgtttc ggactgcgtg tgaaaaacgc cttatccccg
     2581 ccggcatccc tcc
//
LOCUS       DAWKOX010000201         2575 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.201, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000201 DAWKOX010000000
VERSION     DAWKOX010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.201"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(192..263)
                     /locus_tag="WJK78_001891"
     tRNA            complement(192..263)
                     /locus_tag="WJK78_001891"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(228..230),aa:Arg,seq:cct)
     gene            complement(283..729)
                     /locus_tag="WJK78_001892"
     CDS             complement(283..729)
                     /locus_tag="WJK78_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ7598766.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(734..1708)
                     /gene="ispB"
                     /locus_tag="WJK78_001893"
     CDS             complement(734..1708)
                     /gene="ispB"
                     /locus_tag="WJK78_001893"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ7598767.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHERALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            complement(1724..1912)
                     /locus_tag="WJK78_001894"
     CDS             complement(1724..1912)
                     /locus_tag="WJK78_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598768.1"
                     /translation="MVNIRTPLCGTRHCIVICLFCQSLRGSDNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLTET"
     gene            1932..2240
                     /gene="rplU"
                     /locus_tag="WJK78_001895"
     CDS             1932..2240
                     /gene="rplU"
                     /locus_tag="WJK78_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ7598769.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2265..2537
                     /gene="rpmA"
                     /locus_tag="WJK78_001896"
     CDS             2265..2537
                     /gene="rpmA"
                     /locus_tag="WJK78_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ7598770.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          755 a          699 c          572 g          549 t
ORIGIN      
        1 aaacaacaga tttccaagcc ggaacatctt ttacggagcc tgaaaatcat ttcatgattc
       61 taccgtccta aaggtcggtt tttcaagcag gaagaaaaag ttttcagatg gcaaaaaagc
      121 cctccaacac tgaaaggcct tatatcggaa acttcccgca acacgggaaa cagacaaatg
      181 aaatcgtcaa acctcgccaa caggaatcga acctgtattt tacgcttagg aggcatacgt
      241 tctatccgtt gaactatggc gagccgaaat gaaaaggaga ttttaaccct ttccgacgac
      301 aaaagacaag atgccggccg caatcagcgg cccgacaggg ataccgccca taaatgccac
      361 cccgataacc gtcccgatta acagccctgt aattaaaaca ggctgctgtc ccatcaaagg
      421 cacgccgcgt cccgccagcc aagccacgaa aataccgata aaaacggcgg atatcatttt
      481 aaaattcaaa aattcggcaa cgggaggaac ctgcgccttt cctgaaacca acggactcaa
      541 aacccctatg gtcaaaagaa tgataccgag attcaaccca tgcttctcga ccaacgggac
      601 aaactgtacc aatgccgtct gctgcatcag cagcaatatg gttgccgaga tggtaatcga
      661 attgttgttg ctgaccaccc ccaacagaat cagcgtaacc agaaacaggg gaacaaaact
      721 gaaattcatc gcctcaagac accctgacca aagattcctt cgccagctga atcatggcat
      781 ccttcacttc gctgtcgggc agggcatcca aggcggtaac ggcacaatcg actgctttgc
      841 gcgcctcgcc tatcgaatat gccaaagcat ccgaacggac gacataatcg tggattttct
      901 caaaatagct gcgatctgca ttttccaaag cagtacgcac atcgttcgca acctgttcgg
      961 aaccctgacg catcagataa atcaaaggca aagtcggttt tccttccgcc aaatcgtcgc
     1021 cgacgttttt gccggtttct tcggtttcgc cagaatagtc cagcacatcg tcaataattt
     1081 ggaatgccgt accgacatac ataccgtagt ctttcaacgc ccgttcgtgt tcgggggaag
     1141 ccttgcccaa aattgcgccg acctgcgccg ccgcttcaaa caattttgcc gttttatatt
     1201 ggatgacttg gatatattgt tcttcggtaa tgtccgtatt gccgatgttc atcagctgca
     1261 tgacttcgcc ctcggcaata atgttggttg catccgccat cacttccaaa acgcgcatac
     1321 tgcccgaggc aaccatcagt tgaaaggcgc gcgtgtataa aaagtcgcca accaacacag
     1381 ccgccgcatt gccgaacaga ttgtttgccg ttgcccgccc acggcgcaaa tcgctttcat
     1441 cgacgacatc gtcgtgcaga agcgtcgaag tgtggataaa ctcgaccatc gccgccagcg
     1501 aatacagttt ctcgtcatca taaccgaccg ccttacccgc caaaatcgtc ataatcggac
     1561 gcaggcgttt gccgcccgcg ctgatgatat atgtaccgat ttgcgaaatc agtgcgacat
     1621 cggattgcac cgcacggttg atgacttcat tgactttggc aaggtcttca ggcagatgtc
     1681 gctggaaata gggcagattc tcgagcatgg cagactctca ggtttacgtt tccgtcaaac
     1741 ggcagatacc gcttgaaagc tgattcaaat agcgggcaat tatatcagca aagccatcag
     1801 ggtacatctt ttcagacggc atatggttat ccgaaccgcg caaactttga caaaacaggc
     1861 aaataacaat acaatgccga gttccgcaca atggtgtgcg gatattaacc ataaccctta
     1921 tggagttgag tatgtacgcg gtcgtaaaaa ctggcggcaa acagtataaa gtttccgtcg
     1981 gcgaaaaatt gaaagtagaa cagataccag ccgaactcga cagccaaatc gaactgaccg
     2041 aagttttgat gattgctgac ggcgaatctg taaaagttgg cgcacccttt atcgaaggtg
     2101 caaaagtaac ggctaaagta gtggcacacg gtcgtggcga aaaagtccgc atcttcaaaa
     2161 tgcgccgccg caaacactac caaaaacgcc aaggccaccg ccaaaatttc acccaaatcg
     2221 aaatcgtggc aatcgcctaa ccttaaaact taggagcatt acaaatggca agtaaaaaag
     2281 caggcggcag cacccgcaac ggtcgcgatt cagaagccaa acgcttgggc gttaaagcct
     2341 acggcaacga gctgattccc gcaggttcca tcatcgtccg ccaacgcggc accaaattcc
     2401 acgcaggcga caacgtaggt atgggcaaag accacacttt gttcgccaaa gttgacggtt
     2461 atgtcgaatt caaaaccaaa ggcgcgctga accgcaaaac cgtaagcatc cgtccttaca
     2521 ccggttctga agaataattc aaccgaacag gaagccgcat cttttcacga tgcgg
//
LOCUS       DAWKOX010000202         2567 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.202, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000202 DAWKOX010000000
VERSION     DAWKOX010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.202"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            37..177
                     /locus_tag="WJK78_001897"
     CDS             37..177
                     /locus_tag="WJK78_001897"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/arginine repetitive matrix 2"
                     /protein_id="HEZ7598771.1"
                     /translation="MPPHIRHSTSDTAAKSGKTISPFLSRRRVQTRQDRTKREQSRQN
                     MP"
     gene            244..2469
                     /locus_tag="WJK78_001898"
     CDS             244..2469
                     /locus_tag="WJK78_001898"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ7598772.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHTVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKDGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAADIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT          708 a          775 c          593 g          491 t
ORIGIN      
        1 aatttaaacc actataaaat caatttcacc gaaaatatgc cgccgcacat caggcacagc
       61 acctccgaca ccgccgccaa aagcgggaaa accatttccc ccttcctttc acgccgccgc
      121 gttcaaacac gccaagatcg aacaaagcgc gaacaaagcc gccaaaatat gccataatag
      181 ccacgcacat tccccgcgca atgtgttcca aaagaaaaaa ccaacctaca agagaataat
      241 cctatgactc aaaaatccac cattgtttat acccataccg acgaagcccc cgcgctggcg
      301 acccaatcgc tgctgccgat tgtgcaggct tttgcccgcc acgccgatat tgatgtcaaa
      361 actgccgaca tttccctgtc cggccgtatt ttggcggcat tccccgaata tctgaccgag
      421 gcgcagcgcg tacccgacgc gcttgccgaa ttgggcgaac tggtaaaaca acccgatgca
      481 aacgtaatca aactgccgaa catcagcgca tccgtacctc aactgaccgc cgcgattaaa
      541 gaattgcagt ctaaaggctt tgccgttcct gactatcctg ccgaccctca aaccgatgaa
      601 gaaaaagccg tacgcgaacg ctacgaccgc atcaaaggca gcgcggtaaa ccctgtcctg
      661 cgtgaaggca actccgaccg tcgcgccccc aaagcggtga aaaactttgc caaaaaaaat
      721 ccgcacagca tgggcgcatg gacaaaagac tccaaaaccc acgttgccac catgcaaagc
      781 ggcgactttt tccataacga acaatccgtt accgtacctg aagcgacttc cgtatccatc
      841 gtgttcaccg acaaacaagg caataaaaaa gagctgcgcg cgcctgttgc cctgaaagcc
      901 ggcgaaatca tcgacgcaac cgtgatgagc aaaaaagccc tgctcgcctt ccttgccgaa
      961 caagtgaaag acgcgaaggc aaaaggcgta ttgttctcac tgcatatgaa agccacgatg
     1021 atgaaagtgt ccgacccgat tatcttcgga cacaccgtca aagtgttctt cgcgcctgta
     1081 tttgaaaaat tcggcggcaa actggctgcc gcaggtgtca acgtcaacaa cggcttcggc
     1141 aacctgctgg ccaatctgga caaactggat gcggacaccc gcgccgccgt cgaagctgaa
     1201 atcgccgccg tttacgccgc caaccctgat ttggcgatgg ttgattccga taaaggcatt
     1261 accaacctgc acgttcccag cgatgtcatc gttgatgctt ctatgcctgc gatgattcgt
     1321 aactccggcc gtatgtggga taaagacggc aaagcgcaag acaccaaagc cgtcattccg
     1381 gacagcagct atgccggtgt ttaccaagca accatcgact tctgccgcga acacggcgca
     1441 ttcgatccga caacaatggg tactgtgccc aatgtcggtt tgatggcgca agcggcggaa
     1501 gaatacggct cacacaacaa aacctttgaa atcgaagccg acggccaagt ccaagtcatt
     1561 gatgcggcag gaaaagtcct gatgcagcat gacgttgaag caggcgacat ttggcgtatg
     1621 tgccaaacca aagacgctcc ggttaaagac tgggtgcaac ttgccgtcaa ccgcgcccgt
     1681 ctgagcaaca cgcctgccgt gttctggctc gacgaaaacc gtccgcacga caagagcctg
     1741 ctcgccaagg ttaaagccta ccttgccgaa ctggatacca atggcctcga catccgcgtc
     1801 ctcgctcctg aagaagccgc caagttcagc ttgggtcgtc tgaaaaacgg cgaagatact
     1861 atctccgtaa ccggtaacgt cctgcgcgac tacctgaccg acttgttccc gattttggaa
     1921 ctcggcacaa gcgcgaaaat gctgtctatc gttccattga tgaacggcgg cggtatgttt
     1981 gaaaccggcg cgggcggttc tgcaccgaaa catgttcaac aattcctcga agaaaaccac
     2041 ctgcgttggg actctttggg cgaatttctc gcactcgccg tatcgtttga acatctggcg
     2101 caaaaaaccg gcaacaccaa agcccaagtc ctcgccgaca ctttggatgc agccaccgaa
     2161 aaactgctgt tgaacgacaa atcgcctaaa cgtaaagccg gcgaactcga caaccgcggc
     2221 agccatttct acctcaccct ctactgggcg caagaattgg cggcgcaaga caaagatgcc
     2281 gaactgaaag ccgcatttac gccattggca gccgctttga ccgccgacga agcgaaaatc
     2341 gttgccgagc tttccgccgt acaaggcaaa gcggccgaca tcggcggcta ctacgccgcc
     2401 aatcctgaaa aagccgcaca agtgatgcgt ccgagcgtaa cctttaatca ggcactaaac
     2461 gccttataag cacaaaggta aaaatgccgt ctgaacattc gtcgttcaga cggcattagt
     2521 tatccctatc tgcctgatta tgattaaacg ccgcacccat tggatat
//
LOCUS       DAWKOX010000203         2507 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.203, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000203 DAWKOX010000000
VERSION     DAWKOX010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.203"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            170..793
                     /gene="lolA"
                     /locus_tag="WJK78_001899"
     CDS             170..793
                     /gene="lolA"
                     /locus_tag="WJK78_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ7598773.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1066..2205
                     /locus_tag="WJK78_001900"
     CDS             1066..2205
                     /locus_tag="WJK78_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ7598774.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAHPPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2340..>2507
                     /locus_tag="WJK78_001901"
     CDS             2340..>2507
                     /locus_tag="WJK78_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7598775.1"
                     /translation="MNLSIVVPIYNVESYLEACLSSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKI"
BASE COUNT          679 a          734 c          619 g          475 t
ORIGIN      
        1 gcggcacaca ttaaagggca gcgtggcgcg cctgcctttt ccgagcggtc aaaaaaatca
       61 gccctcggaa aacgctgttt gtaaaatgca aaccgcccgt aacgccgccc gtatgattgt
      121 tttgccgcgc cgatacttta cgccacaccc atcccaacaa ggaaaaataa tgatgaaacc
      181 gcacaacctg ttccaatttc tcgccgtttg ctccctgacc gtctccgtcg cttccgcaca
      241 ggcgggcgcg gtggacgcgc tcaagcaatt caacaacgat gccgacggta tcagcggcag
      301 cttcacccaa accgtccaaa gcaaaaagaa aacccaaacc gcgcacggca cgttcaaaat
      361 cctgcgcccg ggcctcttca aatgggaata cacttcgccc tacaaacaga ctattgtcgg
      421 cgacggtcaa accgtttggc tctacgatgt tgatttggca caagtgacca agtcgtccca
      481 agaccaggcc ataggcggca gccccgccgc catcctgtcg aacaaaaccg ccctcgaaag
      541 cagctacacg ctgaaagagg acggttcgtc caacggcatc gattatgtgc tggcaacgcc
      601 caaacgcaac aatgccggct accaatacat ccgcatcggc ttcaaaggcg gcaacctcgc
      661 cgccatgcag ctgaaagaca gcttcggcaa ccaaacctcc atcagtttcg gcggtttgaa
      721 taccaatccc caactctcgc gcggcgcgtt caagtttacc ccgcccaaag gcgtggacgt
      781 gttgagcaac tgatgccgtc cgccccgatg ccgtctgaaa gccgccgagg cttcagacgg
      841 cattttcacg caggcggaac aatgtcccgc attaccgccc gatcgggcat cggaacggca
      901 aacccgtgaa aattaacggt tgcgccccgg ttgtttttgc cgtttaatgc aaaccttgct
      961 gcaccaaggg ccaagaaagc cgaccggccg cccccacagc ttccgatgca ggcggcccgg
     1021 ccgtccctgc aatgtttttt atttttgaac gaaaggtcga aaaccatgaa aaaaacactg
     1081 gtggcggcgg caatcctgag cctcgccttg actgcgtgcg gcggcggaag cgataccgcc
     1141 gcccaccccc cctccgccaa gcccgaagcc gaacaatcgg gcaaactcaa tatctacaac
     1201 tggtcggatt atgtcgatcc cgaaaccgtc gccgcctttg aaaaagaaac cggcatcaag
     1261 acgcgttccg attattacga cagcaacgaa acactggagg caaaagtcct gaccggcaaa
     1321 tccggctacg acctgaccgc gccgtccatc gccaacgtcg gccggcaaat caaagcgggc
     1381 gcgtatcaga aaatcgacaa ggcgcaaatc ccccattacg gcaacatcga taaagatttg
     1441 ctgaaaatga tggaagccgt cgatccgggc aacgaatacg ccgtccccta tttctggggc
     1501 atcaacacct tggcaatcaa cacgcggcag gtgcaaaagg cattgggtac ggacaagctg
     1561 cccgaaaacg aatgggattt ggtgttcaac cctgaataca ccgccaaact caaatcctgc
     1621 ggcatcagct atttcgacag cgcaatcgaa cagattcctt tggcgttgca ctatttgggc
     1681 aaagacccca acagtgaaaa tcccgaagac atcaaagccg ccgtcgatat gatgaaagcc
     1741 gtccgaggcg acgtgaaacg cttcagctct tccggctata tcgacgatat ggcggcgggc
     1801 aacctgtgtg ccgccatcgg ttacggcggc gatttgaaca ttgccaaaac ccgtgccgaa
     1861 gaagccgcaa acggcgtgga aatcaaagta ttgaccccga aaaccggcgt gggcgtgtgg
     1921 gtggattcct ttatgattcc gcgcgacgcg caaaacgtcg ccaacgccca ccgctatatc
     1981 gactacacgc tccggcccga ggtggcggcg aaaaacggca gcttcgttac ctacgcgccc
     2041 gccagccgtc ccgcgcgcga gctgatggat gaaaaataca cctccgacgc atcgattttc
     2101 ccgaacaaag aactgatgga aaaaagtttc atcgtatcgc ccaaatccgc agaatccgcc
     2161 aaactgggcg tgaagctgtg gcaagggctc aaggccggaa aataaccgca acccctgccg
     2221 tctgaaacct ttcgggcggc aggaaacggc gcgtccgtta tcaaacaggg gggggcgttt
     2281 cccctcctgc cggttatgat tgggttaaga ttaaaatgat ttagtaaaat gagaaagata
     2341 tgaatttaag tatcgtagtt cccatttata atgtcgaaag ttatttggaa gcgtgtttaa
     2401 gttccataga acctatatta agtaatgaaa atgtcgaact tatccttgtg aatgacgggt
     2461 caaaagacgg aagtgaagat atatgttata aatatataga taaaata
//
LOCUS       DAWKOX010000204         2506 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.204, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000204 DAWKOX010000000
VERSION     DAWKOX010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.204"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(13..819)
                     /locus_tag="WJK78_001902"
     CDS             complement(13..819)
                     /locus_tag="WJK78_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ7598776.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGLGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1040..2410
                     /gene="ffh"
                     /locus_tag="WJK78_001903"
     CDS             1040..2410
                     /gene="ffh"
                     /locus_tag="WJK78_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ7598777.1"
                     /translation="MLDNLTGRFSNVLKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVVGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          696 a          628 c          651 g          531 t
ORIGIN      
        1 tgttggctct tcttatcttt tcagaatgat ttccaatacg aacttgctgc ccatataggc
       61 aatcatcagg ctgacaaatc cgatgatggt ccacacggcg gcttttttgc cgcgccatgc
      121 ggtcatgctg tgcttgagca gcagtccgcc gtaaatcagc catgacaata tgccgaatac
      181 ggttttatgg gtaaaggtca tgggtttgcc gaatacggct tcggcaaaaa atgttccgct
      241 gacgacggaa taggtcagca ggatgaaacc tgcccacatg gcctggaaca tgagtttttc
      301 caaactgagc agcgacggca ggaatcctgc gagcttggag aagttcctgc ggtgcaggct
      361 ccgattcagc agcagggtca aaacggacaa taatgttgcg atgccgaaca gcccgtatgc
      421 aagcagcgaa gttccgatat gcagcataaa gggaaggtcg gtaatttcat atcccgagaa
      481 ttttccagga aaaaccaaac ctgacagcag catcagtgcg gcgcaaggat acagcagcaa
      541 ctgcactccg cgcagcggat aaaagaagct gccggcaaaa taaataaaca gcatcatcca
      601 aacaatcagg ctgccggaat acccaaagcc cataatgatg attttgtctt gaatgaccgg
      661 cataagcagt gccgcgccat ggacggtcaa tgccgcgccc aaaaccggca attccgtctt
      721 ccacgggtaa tcccggccga gcccctgctg ttggcagtgc catgcaaatg cacccaatcc
      781 tgcgtaaacc gccgtcaaaa agatgaaaac tgtcggcatg gtggactttc tctaatctat
      841 actgttgcgc tgtatgcggc cgcttatgaa atattggaac ttttaacgtt ggaattgtaa
      901 aatccccgtt tcgggcaagc cttgacggat ttgccgatat gctgtccggc acacaagccg
      961 catcaaatta ttttgatttt attttaacaa agaatgcccc tgatggggca agctattctt
     1021 attcagacca aggaccagta tgttagacaa tttaaccggc cgcttcagca atgttctcaa
     1081 aaacatccgc gggcaggcca aactgaccga agacaatatt aaagaagcct tgcgcgaagt
     1141 ccgcctcgcc ctgcttgagg cggatgtcgc cctgcctgtc gtcaaagagt tcgtcaacaa
     1201 cgtcaaagaa aaggccctcg gtcaggaagt ggtgggcagc ctgacgccgg atcaggcatt
     1261 tatcggcgtg gtcaacaaag ccctgaccga gctgatgggc agggaaaaca aaacgctgga
     1321 tttgtcggtt gcgccgcccg ccgtcgtgtt gatggcaggt ttgcagggcg cgggcaagac
     1381 gacgaccgcc ggcaaactcg cccgcctgct gaaaaacgat cagaagaaaa aggttttggt
     1441 cgtatctgcc gacgtttacc gccctgccgc gattgaacaa ctgcgtctgt tggccgaaca
     1501 ggtcggcgtg gactttttcc catccgatac caaccaaaaa ccggttgaga ttgcaactgc
     1561 cgccgtcgat tacgccaaaa aacattttta cgatgtattg atggtcgata ccgccggccg
     1621 tttggcaatc gatgaggaga tgatgaacga aatcaaagcc cttcacgcgg cggttaaccc
     1681 ggtggaaact ttgttcgtca tcgatgcgat gctgggtcag gatgcggtga acactgctca
     1741 ggcatttaat gaagccctgc cgctgaccgg tgtcgtattg accaagatgg acggcgattc
     1801 gcgcggcggc gcagctttgt ccgtgcgcca cgtaaccggc aagccgatta aatttatcgg
     1861 tgtcggcgaa aaaatcaacg gcctcgaacc tttccacccc gaccgtcttg ccagccgtat
     1921 cctcggcatg ggcgacgtat tgaccctgat tgaagacgtc caaaaaggta ttgatgaaga
     1981 agccgccgcc aaaatggcga aaaagctaca aaaaggcaaa ggcttcgacc tcaacgactt
     2041 taaagaacaa atccagcaaa tgcgcaatat gggcggtttg gaaaacctga tgtcgaaaat
     2101 gccgggcgaa ctgggtcaaa tatcgaaaca aatccccgaa ggaacggctg aaaaagcgat
     2161 gggcaaagtg gaagccatca tcaactcgat gactccaaaa gaacgcgcca accctgccct
     2221 gctcaaagcc agccgcaaac gccgtattgc aatgggtgcg ggcacgaccg tacaggaagt
     2281 gaacaaattg ctcaaacagt ttgaacaaat gcaacaaatg atgaagatgt tcagcggcaa
     2341 cggcttgggc aaactgatgc gtatggcgaa aggaatgaag ggaatgaaag gaatgttccc
     2401 gggtttgtaa gccgatttga ccgaaaacgc cgtctaaaat ttcagacggc gtttttgttt
     2461 tatattctga tttatagtgg attaacaaaa atcaggacaa ggcggc
//
LOCUS       DAWKOX010000205         2470 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.205, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000205 DAWKOX010000000
VERSION     DAWKOX010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2470
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.205"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..979
                     /locus_tag="WJK78_001904"
     CDS             <1..979
                     /locus_tag="WJK78_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HEZ7598778.1"
                     /translation="KTNRAYWDELSNELGDEIGSYSQLFKTAEEIEQEIADIKNALFD
                     FDTENAEEFCSQISQIEDKKQLLALKKALQTSKELYNALRLQGSHEFLVHLDFDKLNL
                     LYRETAARLDTLNLAEKLQQGDTAHLLNEALEDVYFQFVKIGEAELKLADDLKDIMRK
                     VREGLAGNFDQDDPEYISLREELERIFKKKNLAEVGQEEMQANIATLQIVYAKIKELN
                     RQNDLLRHKYGGDAKYARTHKRLMENAAFYGDKLKVFNALNGVKADADQKVLDMEQIL
                     DNQNYFEKQMQGIVLKRFRTEQQFPVQPQDIQAINRLLVREYLKESGRM"
     gene            1106..2299
                     /locus_tag="WJK78_001905"
     CDS             1106..2299
                     /locus_tag="WJK78_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ7598779.1"
                     /translation="MKRQITIGEIAEINANSLTQKDMFQEIMYLDTGNITRNEIDNIQ
                     VLNVMMDKIPSRAKRKVKDKTIIYSTVRPNQEHYGFLENPGDNFIISTGFSTIDVYDE
                     NTDEKFIYYLLTQKHITDYLHTIGENSVSSYPSINPDDIANLKFAVPDLKTQQSIAAV
                     LSALDKKIALNKQINARLEDMAKTLYDYWFVQFDFPDANGKPYKSSGGEIVFDETLKR
                     EIPKGWGSIELQSCLAKIPNTTKILNKDIKDFGKYPVVDQSQDFICGFTNDEKSILNP
                     QDAHIIFGDHTRIVKLVNFQYARGADGTQVILSNNERMPNYLFYQIINQIDLSSYGYA
                     RHFKFLKEFKIILPSKDISQKYNEIANTFFVKVRNNIKQNHQLTQLRDFLLPMLMNGQ
                     VSVAE"
     gene            2347..>2470
                     /locus_tag="WJK78_001906"
     CDS             2347..>2470
                     /locus_tag="WJK78_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ7598780.1"
                     /translation="MTEQHFTEQTKSLIDSLKTICANYGLGNDGNEFKIISQAFL"
BASE COUNT          871 a          519 c          472 g          608 t
ORIGIN      
        1 caaaaccaac cgcgcctatt gggacgaact ttctaacgaa ttgggcgacg aaatcggcag
       61 ttacagccag ctattcaaaa ccgccgaaga aatcgaacag gaaattgcag acattaaaaa
      121 cgccctgttt gatttcgata ccgaaaacgc cgaagaattt tgcagccaaa ttagccaaat
      181 agaagacaaa aaacagcttc tcgccctaaa aaaagccctg caaacttcca aagagctata
      241 caacgctctg cgcctgcaag gcagccacga atttcttgtg catctggatt ttgacaagct
      301 caaccttctg taccgcgaaa ctgccgcccg tctggatacc ttaaaccttg ccgaaaaatt
      361 acagcaaggc gacaccgccc atttgctcaa tgaagcgctg gaagacgttt actttcaatt
      421 cgtcaaaatc ggcgaggcgg aactcaaact tgccgacgat ttaaaagaca tcatgcgcaa
      481 agtccgtgaa gggctggcgg gcaacttcga ccaagacgac cccgaataca tcagcctgcg
      541 cgaagagctg gaacgcatct tcaagaaaaa gaacctcgcc gaagtcgggc aagaagaaat
      601 gcaggcaaac atcgccacac tccaaatcgt ctatgccaaa atcaaagagc tgaaccgcca
      661 aaacgacctt ttgcggcaca aatacggcgg cgacgctaag tatgcccgca cccacaagcg
      721 gctgatggaa aacgccgcct tctacggcga caaactcaaa gtttttaacg ctctaaacgg
      781 cgtcaaagcc gatgccgacc aaaaagtgct ggatatggag cagattttgg acaatcaaaa
      841 ttactttgaa aaacaaatgc agggcatcgt attaaaacgc tttagaacgg agcaacaatt
      901 tcctgttcaa ccccaagaca tccaagccat caaccgcctg ttggtgcggg aatatttaaa
      961 agaaagcggg cggatgtgag aaagcggttt tttaggtagc ctttatgggc gtattgcata
     1021 cgttcgaagt ggacaataaa agtgcggttg gattttgaaa tttttttcag acggcctttg
     1081 aagagtttcg agagattaag ttaagatgaa acgacaaatt acaattggtg aaatcgcaga
     1141 aataaatgcc aactccctca ctcaaaaaga catgtttcaa gaaatcatgt atttggatac
     1201 tggcaatatt actagaaatg aaatagataa tatccaagtt ttgaatgtca tgatggataa
     1261 aatacctagc cgtgcaaaaa gaaaagtaaa agataagact attatctatt ctacagttcg
     1321 cccaaatcag gagcattacg gttttttgga aaatcctggt gataatttca ttatatcaac
     1381 agggtttagt acaattgatg tttatgatga gaatacggat gaaaaattta tttactattt
     1441 attgactcaa aagcatatca ctgattattt acatacaatt ggcgagaaca gtgtttcatc
     1501 atatccatcg ataaatcctg atgatattgc aaatctaaaa tttgcagttc ctgacctcaa
     1561 aacccaacaa tccatcgccg ccgtcctatc cgctttggac aaaaaaatcg ccctgaataa
     1621 acaaatcaat gcgcgcctgg aagatatggc gaaaaccctg tacgactatt ggttcgtgca
     1681 gttcgacttc cctgacgcca acggcaagcc ctacaaatcc tcaggcggcg aaattgtgtt
     1741 tgatgaaacc ttgaaacggg aaattccgaa ggggtgggga agtatagaat tacaatcttg
     1801 cttagcaaaa atcccaaata ctacaaaaat attaaataaa gatattaagg attttggaaa
     1861 atatcctgtt gttgaccaaa gtcaagattt tatttgtgga tttaccaatg atgaaaaatc
     1921 tatattaaac ccgcaagatg ctcatattat ttttggtgat catacaagaa ttgttaagtt
     1981 agttaatttt caatatgcgc ggggagcaga tggtacacaa gtaatattaa gcaataatga
     2041 acgaatgcca aactatttgt tttaccaaat cataaatcaa atagatttat caagttatgg
     2101 atatgctaga catttcaaat tcttaaaaga atttaaaata attttaccta gtaaagatat
     2161 ttctcaaaaa tataatgaaa tagcaaatac tttctttgtt aaagttcgaa ataatataaa
     2221 acaaaaccac caactaaccc aactccgcga tttcctactt cccatgctga tgaacgggca
     2281 ggtttctgtg gcggaataag ccaaattcaa gaatcagacc tacaaaataa aacaaacgag
     2341 aaaaaaatga ccgaacaaca ctttaccgaa caaaccaaat ccctaatcga cagcttaaaa
     2401 accatttgcg ccaactatgg tttgggcaat gacggcaacg agttcaaaat catcagtcag
     2461 gcatttttgt
//
LOCUS       DAWKOX010000206         2467 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.206, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000206 DAWKOX010000000
VERSION     DAWKOX010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2467
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.206"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(241..2391)
                     /gene="yccS"
                     /locus_tag="WJK78_001907"
     CDS             complement(241..2391)
                     /gene="yccS"
                     /locus_tag="WJK78_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ7598781.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTTASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT          449 a          492 c          937 g          589 t
ORIGIN      
        1 ttcaattcta aggcaattta tcgggaatga ctgaaactca aaaaactgga ttcctacttt
       61 cgtgggaatg acgggatttt aggtttctgt ttttggtttt ctgttttcgt gggaatgacg
      121 gaatgtagat tcgtgggaat gacggttcag ttgctacgca tttaccctgc gcaaagcttt
      181 atccactatc ttgcaacctg tctgacaatc tgctctctct tacaaaatgc cgaaactttt
      241 tcaggctgcg ttttggggct gcctgtgcgg aatttgtcgg taggcgcggt agtagggttc
      301 gagctgccga gcgatgagtt ggagctgttg gaggaggatg tggctttgtg ttccgctgct
      361 gtgggtgcgg agggtgtcga gttcgccgcg cagtgtatcc agtgctgtct gaaagtcgtc
      421 gggttcggtt tcgggcaggt gttggaagat gtgggcggtg tgttcggcgg cgaggtggaa
      481 ctgtgcggta aagtcggggc tgcattcttc gtgcatttcg ctgcggtatg cgccgagggc
      541 ggagatgtag ccggtcaggg cgtagccggt tttgagcagg gtaaagccgg gttgcaggct
      601 gtcggcgaat tttgcgggtt cgctgctcat gtcggaaagg gtgctgctga gggcggcggt
      661 gtgttcgtgg gcgcggcggc gggtggcgcg gtattcgacg tcgtcgccgg tttcgccgct
      721 tttgaggcgt tcggtgattt tttcgagata ggcgccgttg ctgcatacgg caagggcggc
      781 ggtgcgttcg agcgtgaggt atttccagtc gggccatagg tagctgaccg ccgcccaggc
      841 aagggatgcg ccgataatgg tgtcgatgat gcgcacgggc atggcggcgt atacgtccaa
      901 acctgcgagg gagaggctgg tcagggcttg aatggtaatg aagaaggtgg agaaactgta
      961 tttgtaggtg cgggtcatga aaaagagggt ggtactggcg atgacgatcc aaagcttggt
     1021 ttcgacggag ggggtaaagt aggggacgag cgagccgacg attacgccga gtacggtacc
     1081 ggcaatgcgc tggcggacgc ggcttttggt ggcggtgtag ttaggctggc agacgaaaag
     1141 ggcggtcagc agtatccagt agccgaggtt gaggttgagg gcttcgacga tggtgcaggc
     1201 ggcggcaacg acaagggaca ggcggacggc atggcggaat acgcctgatt cgaggtttag
     1261 ctgcggacgg attgcctgcc aggtgttttt gaggctgccg gtttcgaggg cggcgatgcg
     1321 ggtgtcgccc atgcggtcgt tttctgcctg caggccgttg tgctggagtt ggcggaattg
     1381 ttggtcgacg ctgccgaggt tgtcgagaag acggcgcagg tggcggatgt cggggctgtc
     1441 gttgccgtcg gaaaggagac gcagcgattg gcggcagcct tcgatggcgc ggccgaggcg
     1501 tttgctgtaa acgtagtctt tgcttgcgcg cagggcttgg gcggtgttgc ggcaggcttg
     1561 tccctgcatt tcgagtaggc ggtggatgcg gaagatgatg tcggtgtttt tgaatttttc
     1621 ggacatttcc tgataatcga cgtgggcgga gctgatgcgt tcgtggatgt cttgggcggc
     1681 gaagtagtag cgcagcattt tggcggtgcg cgggtggcgg tgtttgccgc gaaggcggta
     1741 aaacagggcg gaacggcatt ggttgaaggc ggtgatgacg ccggtgttgc tcatggcgag
     1801 gtcgatgtgg cggttgccta tccaggctgc ctcatcgggg tcgaagaagt cggctttggc
     1861 ttcgaggtag ccaccgagtg cgtcgtaggc gttggcgacg ctttcttgga cggggcggtg
     1921 gggcaggatg atttggaaca ggatgatggc ggtgctgtac agtacggtgc cgcataaaat
     1981 catgaagggg ttggtcagcc agtaggtttc gggggtgtag gtaagtgtgg tgtaggtggc
     2041 gacggcgagt gcgccgaagg cgaaggtgcg gtatttcagc ccgaccgcgc ctaaaatggt
     2101 aaagccgaag gtcatcaggg tcatggcgag gatgaagggc agccctgtgc cgagggtgct
     2161 ttgtgccgtg agcgaggaga gggtaaacag ggcgacggtg gcgatgatgt ttttcagccg
     2221 tccggtcagg cggttgtcca aatcgacaag gccgccggcg atgatgccga gtacgaaggg
     2281 catggcgagc ttgggttcgc ctagctgcca gacgatggag gcggtggtaa aaacactggc
     2341 gaaaacggga agcgaggtaa tgagcagagg cttgaggagt ggggttttca tggttttacc
     2401 ggtttattgt tatgaagtga atatagtgga ttaacaaaaa ccagtacggc gttgcctcgc
     2461 cttagct
//
LOCUS       DAWKOX010000207         2429 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.207, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000207 DAWKOX010000000
VERSION     DAWKOX010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.207"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(228..1862)
                     /gene="groL"
                     /locus_tag="WJK78_001908"
     CDS             complement(228..1862)
                     /gene="groL"
                     /locus_tag="WJK78_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ7598782.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAIESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEEKPAMPDMGGMGGMGGMM"
     gene            complement(1956..2243)
                     /locus_tag="WJK78_001909"
     CDS             complement(1956..2243)
                     /locus_tag="WJK78_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ7598783.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVE"
BASE COUNT          484 a          642 c          636 g          667 t
ORIGIN      
        1 ttcgcgggaa tgacggcgga aaggttgctg tttttccgat aaattcctgc cgctcttcgt
       61 ttttgggatg gcgggaaata aaacaaaagc gcgcgtatca aaaaacaaaa atgcaaagaa
      121 cggcgttggc aattttaagg tttgcgcctt agccgcactt attcgcaaaa aaaaccgcac
      181 ggcgttgacc gtgcggcttg ttgtctgaaa gcttcagacg gcatttctta catcatgccg
      241 cccataccgc ccatgccgcc catgtcaggc atagcaggtt tttcttcagg gatttcagcg
      301 atcatgcagt ctgtggtcag catcagaccg gcgatagatg cggcgtgttg cagcgcggaa
      361 cgggttactt tggcaggatc gagtacgccc atttcaatca tatcgccgta ttcgccgctg
      421 ccagcgttgt aaccgtagtt gcctttgcct tccaacactt tgttcacgac tacgctgggt
      481 tcgccgcctg cgttggcaac gatttggcgc agcggagact caatggcgcg caagacgatt
      541 tgtacgcctg cgtcttgatc ggcattgccg gtgtgcaggt tttccagagc ggcacgggcg
      601 cgcaacaggg ctacgccgcc gcctgcaacc acgccttctt caacggctgc gcgggtagca
      661 tgcagcgcgt cttctacgcg gtcttttttc tctttcattt cgacttcggt agcggcaccg
      721 actttgatta ctgccacgcc gcctgccagt ttggccacgc gctcttgcag tttttctttg
      781 tcgtaatcgc tggttgcggt ttcgatttgt tggcggattt cggcaacacg cgcttcgatt
      841 tgggctgcgt cgccgaagcc gtcgatgatg gtggtgtttt ctttaccgat ttcgatgcgt
      901 ttggcttgac ccaagtcgtc caaagtcgct ttttccagag acaggccgac ttcttcggaa
      961 atcaccgtgc cgccggtcag gatggcgatg tcttgcagca tcgctttgcg gcggtcgcca
     1021 aagcccggag ctttaacggc aacggttttc aggatgccgc gaatgttgtt taccaccaaa
     1081 gtcgccaagg cttcgccttc tacgtcttca gcgataatca agagcggacg gctggctttt
     1141 gccacttgtt ccaaaacagg caacaagtcg cggatgttgc tgattttttt gtcgaacagc
     1201 aatacaaacg gattgtccaa gccggcgatt tgtttttccg catcgttgat gaagtaagga
     1261 gacaggtagc cgcggtcgaa ttgcatacct tcaaccacgt ccagctcgtt ttccaaagat
     1321 ttgccgtctt caacggtaat cacgccttct ttgccgactt tttccatcgc ttcggcaata
     1381 atcgcgccga cttgttcgtc ggagttggcg gaaatcgagc cgacttgggc gatttcttta
     1441 gaagtgtcgc aaggtttggc gatgtttttc agctcttcaa ccaaagcggc gacggctttg
     1501 tcgataccgc gtttcaggtc ggtcgggttc ataccggcgg taacgtattt cataccttcg
     1561 gcaacgatgg attgcgccag tacggtggcg gtagtcgtac cgtcgcccgc cacgtcgttg
     1621 gttttggacg cgacttcttt taccatttgc gcgcccatat tttcaaactt gtctttcagt
     1681 tcgatttctt tagcgacggt tacgccgtct ttggtaatgt gcgggccgcc gaaagcgcgg
     1741 tcaaccacca cgttgcggcc tttgggaccc agggttacgc gcacggcgtt tgccagaatg
     1801 ttcacgccgt ttaccatttt ttgacggact tcattgccga attgtacgtc ttttgctgcc
     1861 atttcaattc tccaaaaatc attaaaactg tctgataaaa ccgtttatgc cgtctgaagg
     1921 cggtttgccg tttcagacgg catcatcatt cgcacttatt caacgatgcc gaaaatatct
     1981 tcttcgcgca ttaccaacag ctcttcgccg tcggctttta cggtttggcc gctgtatttg
     2041 ccgaaaatga ttttgtcgcc gactttgaca tccagcggac ggcgcgcgcc gtctttaccg
     2101 attttgcccg cgcccacggc gatgacttcg cccatatcgg gtttttcggc ggccgcaccc
     2161 ggcaaaacga tacccgatgc ggttttttct tcagcttcca agcgtttgac gacgacgcgg
     2221 tcgtgtaaag gacggatggt catatttatg ctccgataaa atggtttgaa aacaatcatc
     2281 tgcccgaacg gttcggacag attgaagtgg aaaccgggct gccgcctgcc ggccgcccgt
     2341 atgaatcggc aaaattaggg tgtgtgcggg caaattcaag tgaggcggaa aaaatttatt
     2401 tccgccgttt tttatagtgg actaaattt
//
LOCUS       DAWKOX010000208         2393 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.208, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000208 DAWKOX010000000
VERSION     DAWKOX010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.208"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            65..490
                     /locus_tag="WJK78_001910"
                     /pseudo
     CDS             65..490
                     /locus_tag="WJK78_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            496..1725
                     /locus_tag="WJK78_001911"
                     /pseudo
     CDS             496..1725
                     /locus_tag="WJK78_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777561.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            1783..>2393
                     /locus_tag="WJK78_001912"
     CDS             1783..>2393
                     /locus_tag="WJK78_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ7598784.1"
                     /translation="MTTHHVELRNVTKRFGAQKAVNQVDLVLKAGESVGLAGHNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALPPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGLDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRI"
BASE COUNT          592 a          652 c          633 g          516 t
ORIGIN      
        1 tatcccgtat gcggattggt tttaagattt gtaaatttga tttgcatcaa aaaatcgccg
       61 atagatgatt catataatat caatattaaa gagtatcggt atatcgggga tagtcatgtc
      121 ctgtttttca atcaaacgta tgtccgcgtt tcgggcgcgg ataacggcgt tttttgccgc
      181 ctttgtcttt ttgacggcgg cactgcccgc ttatgcggag cgtctgcctg attttctggc
      241 gaaaatacag ccttcggaaa tttttccggg tgcggaccgt tacggcaagc cggaaggtaa
      301 gcctatggtt gcccgcgttt acaaaggcga tgagcagctc ggtttggtct atatcacaac
      361 cgatgtggtc aatacgcgcg gttattcgag caaaccgatt gatacgctga tggcgttggc
      421 taaagacggt acgatagccg gagcgaaatt ggttgatcac catgagtcga ttatgctgat
      481 cggtatcccg catttgcccg cgcccgggcg ggcgatacgc tcaaactggc ttccggcgta
      541 tatcaaacca aacttcacat cgacaaaccg attacgattg aagggcctgc cgaccgttct
      601 gcaaccatcg aaggagacag gagcgggcgt accatagccg tacacgcgcc ggacgtaacg
      661 ctccgcaacc tgaccgttac ccgttccggt atgagcctgc ccgcaatgga tgccggtatt
      721 tatctcgaag aaactgcccc gcgcgccctg attgaacaca ataatatttt ggataattcg
      781 gtcggcgtct atctgcatgg ttctgccgat gcgatggtgc gggagaataa aatcgtcggc
      841 gacgcgactt tgcgcgtgaa cgagcgcggc aatggcgtta ccgtttggaa cgcgcccggc
      901 gcgcaggtcg tcggcaacga tatttccaaa gggcgggacg gcattttttc caataccagc
      961 acgcacaaca cctataaaaa caaccgcttc agcgatttgc gtttcgccgt ccactatatg
     1021 tacaccaacg acagcgaaat cagcggcaat atttccgtgg gcaacaatat gggctatgtg
     1081 ctgatgtttt ccgagcggct caaagtgttt gacaatatcg ccgtcggcag ccgcgaccaa
     1141 ggcatcatgc tcaactatgt caactattcc gatattcacg acaacattat caacaaagcg
     1201 ggcaagtgcg tttttgccta caatgccaac tacgataaac tgtccgccaa tcattttgaa
     1261 aactgccaaa tcggcataca ctttaccgcc gccatcgaag gcacgtcact gcacgacaat
     1321 tcctttatca acaacgaaag ccaggtcaaa tacgtcagca cgcgctttct cgactggagc
     1381 gagggcggac acggcaacta ttggagcgac aacagcgcgt tcgatttgaa cggcgacggc
     1441 ttcggagaca gcgcgtaccg tcccaacggc atcatcgacc aaatcatctg gcgcgcaccc
     1501 gtatcgcgcc tcttgatgaa cagtcccgca atcagcatcg tcaaatgggc gcaggcgcag
     1561 tttcccgccg ttctgcctgg cggcgtggtg gacagcaaac cgctgatgaa gccttatgcc
     1621 cccaaaattc aaacccgtta tcaggcgatg aaggacgggc tgctcaaaga agccgaaacg
     1681 cggcagttgg aatggggcag ggcggaaaac ggttctttga actagtctgt ttcagacggc
     1741 atccggattc aaatgccgtc tgaaaacaca aaaggaaaaa ccatgaccac acatcatgtc
     1801 gaattgagga atgtaaccaa acggttcggg gcgcaaaaag cggtcaacca agttgatttg
     1861 gttttgaagg caggagaaag cgtcgggctt gccggacaca acggcgcggg caagtccacc
     1921 attatgaagc tgatactcgg gctgattacc ccgaccgaag gcgaagtgat gcttttgggc
     1981 gaacgtaccg gtagcaaagc gggggcgcgg cttcgcagcc aaatcggcta cctgcccgaa
     2041 accgttgcgc tgcccccttc gctgaccggc atcgaaacgc tggattttta tgccaaactt
     2101 aaaaaacagc cgctcacgca gaaccggggg ctgcttgagc gtgtcggtat ttcacaggcg
     2161 gcacaccgcc gcgtcggcac ttattctaaa gggatgcgcc aacgccttgc cttggcacaa
     2221 gccctgctgg gcgagcccaa agtcctgctg tttgacgaac cgacaaccgg cctcgaccct
     2281 gcatcacgac aaatgtttta cgaagtcgtg cgcgaactca acgggcgcgg cgcgaccgta
     2341 ttgctcagca cccacgccct tgccgagttg gacggacacg ccgaccgcat tat
//
LOCUS       DAWKOX010000209         2338 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.209, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000209 DAWKOX010000000
VERSION     DAWKOX010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.209"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            43..2256
                     /locus_tag="WJK78_001913"
     CDS             43..2256
                     /locus_tag="WJK78_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ7598785.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKKLVLAARSLA
                     EAHYPADAVTPYGEPLSDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LTFDGLFDIRAVRILVDTIPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          600 a          748 c          572 g          418 t
ORIGIN      
        1 ctgttacaat aaactcgttt ttatcggaac gaaagaccca tcatgaccgc catcagcccg
       61 attcaagaca cgcaaagcgc gactctgcaa gaattgcgcg aatggttcga cagctactgc
      121 gccgcgctgc cggacaacga taaaaaactt gtcttagccg cccgttcgct ggcggaagca
      181 cattaccccg ccgatgccgt cacgccgtat ggcgagccgt tgtccgacca cttcctcggc
      241 gcggcacaaa tggtcgacga actcgacctg ctgcccgatg ccgtcgccgc caccctgctt
      301 gccgacatcg gacgctacgt ccccgattgg aatctattgg tttccgaacg ctgcaacagc
      361 accgtcgccg agctggtcaa aggtgtggac gaagtgcaga aactcaccca cttcgcccgg
      421 gtggacagcc tcgccacgcc ggaagaacgc gcccagcaag cggaaaccat gcggaaaatg
      481 ctgctggcga tggttaccga catccgcgtc gtgttaatca aactggcgat gcgtacgcgc
      541 accctgcaat ttttaagcaa cgcccccgac agccccgaaa aacgcgccgt tgccaaagaa
      601 accctcgaca tcttcgcccc gctcgccaac cgtttgggcg tgtggcagct caaatggcag
      661 ctcgaagatt tgggcttccg ccatcaagaa cccgaaaaat accgcgaaat tgccctgctt
      721 ttggacgaaa aacgcaccga acgcctcgaa tacatcgaaa acttcctcaa tatcctgcgt
      781 acggaactga aaaaatacaa tattcatttt gaagttgccg gaagaccgaa gcacatctac
      841 tccatttaca aaaaaatggt gaagaaaaag ctcactttcg acggcttgtt cgacatccgc
      901 gccgtacgga ttttggtgga caccattccc gagtgttata ccacgctggg cattgtccac
      961 agcctctggc agccgattcc gggcgagttc gacgactaca tcgccaaccc gaaaggcaac
     1021 ggctataaaa gtttgcacac cgttatcgtc ggcccggaag acaaaggcgt ggaagtgcaa
     1081 atccgcacct tcgatatgca ccaattcaac gaatttggtg ttgccgccca ctggcgttat
     1141 aaagagggcg gcaaaggcga ttccgcctac gaacagaaaa tcgcttggtt gcgccaactc
     1201 ttggactggc gcgaaaacat ggcggaaagc ggcaaggaag acctcgccgc cgccttcaaa
     1261 accgagcttt tcaacgacac gatttatgtc ctgaccccgc acggcaaagt cctctccctg
     1321 cccacgggcg cgacccccat cgacttcgcc tacgccctgc acagcagcat cggcgaccgt
     1381 tgccgcggtg cgaaagtcga agggcagatt gtgccgctgt ccaccccgct cgaaaacgga
     1441 cagcgcgtcg aaatcattac cgccaaagaa gggcatcctt ccgtcaactg gctttacgaa
     1501 ggctgggtca aatccaacaa ggcaatcggc aaaatccgcg cctacatccg acagcaaaac
     1561 gccgacaccg tgcgcgaaga aggccgcgtc caactcgaca aacagcttgc caaactcacg
     1621 cccaaaccca acctgcaaga gcttgccgaa aatctcggct acaaaaagcc agaagacctc
     1681 tacaccgccg tcggacaagg cgaaatttcc aaccgcgcca tccaaaaagc ctgcggcacg
     1741 ctgaacgaac cgccgcccgt acccgtcagc gaaaccacca tcgtcaaaca gtccaaaatc
     1801 aaaaaaggcg gcaaaaacgg cgtgctcatc gacggcgaag acggtctgat gaccacgctt
     1861 gccaaatgct gcaaacccgc gccgcccgac gacattgtcg gcttcgttac ccgcgatcgc
     1921 ggcatttcgg tacaccgcaa aacctgcccc tctttccgac acctcgccga acacgcgccc
     1981 gaaaaagtac tggacgcaag ttgggcggcg ttgcaggaag gacaagtgtt cgccgtcgat
     2041 atcgaaatcc gcgcccaaga ccgctccggg cttttgcgcg acgtatccga cgcgctcgcc
     2101 cgccacaaac tcaacgttac cgccgtgcaa acccagtccc gcgacttgga agccagtatg
     2161 cggttcacgc tcgaagtcaa acaggtcaac gacctcccgc gcgtcctcgc cagcctcggc
     2221 gacgtcaaag gcgtattgag cgttacccgg ctttaaatac aaaaatgccg tctgaaagcc
     2281 gtataacgct tcagacggca ttttgattga cggggtttgc tattttttgt tgcatagt
//
LOCUS       DAWKOX010000210         2317 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.210, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000210 DAWKOX010000000
VERSION     DAWKOX010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2317
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.210"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..1462)
                     /gene="dacB"
                     /locus_tag="WJK78_001914"
     CDS             complement(53..1462)
                     /gene="dacB"
                     /locus_tag="WJK78_001914"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ7598786.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGISDTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDIADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1627..2193
                     /locus_tag="WJK78_001915"
     CDS             1627..2193
                     /locus_tag="WJK78_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ7598787.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          526 a          563 c          670 g          558 t
ORIGIN      
        1 tcctagttat ctaggacagc cccttaaatt taatccacta tattttcctg tttcaggctc
       61 ggcgttcttt gcacatcagt ttcgcatcca gccagccatc gccgccggag atgatgttgt
      121 tggcaacgaa gttgtccaag tcgggcagca gggaaacggc gcggccgctg ttgatgatga
      181 cgaccaccgc catcggtttg tcgcccagcc aataacctgc aagggcgcgg acattgttga
      241 gcgtgccggt ttttaagcgc aacagcccgc cgctttgttt gaagcggttg cgtaaagtcc
      301 cgtctgtgcc ggcgatgggt agcgtatcga tgaaatcttg tgcaaacggg ctgaaataag
      361 ccgtttccaa catttgcgcc atcattctcg ccgttaccct ttcttttctg gacaggcctg
      421 aaccgttttc caaaaccaaa tccgcaatat cgatgcccga cacggcaagt tcgcgccgga
      481 cggcagatgc cgcctgttcg gaaacggcgg gcagtttgcc gtcgccgccg agtttgagga
      541 agacggaacg cgcaattaga ttgtccgaac gcttgttcat gtccgtcaaa atttccttca
      601 tcggctttga gtgtgcaacg gcaagcgtct gcgcgccttc cggcgtgtcg gatatgccga
      661 tgccgtctga aatccgtccg ccgccgagca gccagtggtt ggtaaaactt tgccggatca
      721 gttcgtcaag cgcgaacatc cggacaccga caggcttgcc caaacagctc tcgggaatat
      781 tgccgcgcaa tttcagcgta ttgtccgaaa aagatgcacg catcagtttt ttgatcgaag
      841 ggcaggcagc ttgggaggcg gtaattttca agttgttttg ggcgaaaata tgcggcaaag
      901 gcggatcggt gaggatgtcg gtactgtcgg cggcattgcg ttcggcgcgc accataacca
      961 taccggcaga cagcatagtt ggattggggg gcgtcataaa cggcgaaccg ctgtcggctt
     1021 cgaaatcgtc ggggctgccg acttcgcccc acaggctgtg gtcgagcatc aggtgtcccg
     1081 tgatattgcg tatgccttgt tcgcgcaact ggcgttggac ggcaagcagg ttttcctgat
     1141 tgaaaacggg gtcgccgctg cccgcccaat acaggtttcc gtcaagcgtg ccgtcgttta
     1201 ccgtaccgtt gcttttaaac tcggtcgccc agcggtaatt gctgccgaag gttttgaagg
     1261 cggcaaacgc ggtaacgagt ttcattgtgg aggcggggtt gacggggaca tccgagcggt
     1321 ggtcaatgat gacttttccg ctgtcaagct cttggacata tacggcgatt tcgttttgcg
     1381 gaatgcggcc ggtatcgagc gcgtgtgcgg cgagggaggc gagaagcagc agcagggagg
     1441 ccgctgtttt ggggaaattc ataggtaaat ctgttacata aaaaaagcaa ttataaggca
     1501 aagccggata agtgggaacg ctgtggcggc gggccggctt gtttgcaggg gaaatcacat
     1561 atataataat cgctatcatt atgaaatgat tgagacgcac aaacttaata ttcaggagga
     1621 atgattatgg ctaagaaaat cagtattttg gtgggcagcc tgcgccgtgc ttcttttgcg
     1681 cgcaaagtgg cattgaatgc ggcggagatg ttccccgaag gctggcaggc ggaaatcgtc
     1741 gaaatcggac atctgccgct ttacaatttc gattatgacg accctgcggt ggaagatgtg
     1801 ccgctgcccg aaagctacac ggctttccgc gaaacgatta aggcttcgga cggcattttg
     1861 ttcgttacgt ccgaaaataa ccgcaccatt cccgcctgtt tgaaaaatgc ggtggacatc
     1921 ggctcgaaac cgaatgccga cgtggcgtgg aaaaacaaac cggccggtat catcagccat
     1981 tccgtcggca agatgggcgg ttacagttcg caaaaaaacc tgcgccttgc gctgtcttat
     2041 ttcgatatgc ccgtaaccgg acagccggaa gtgtttttgg gcaattcgcc gacgctgttt
     2101 gatgaaaacg gcaaattgat cgactcggca agggattttg ttcagtcata tattaatcag
     2161 tttgttggtt tgattgaaag aaatgccaaa taaacaaacc aagtcgaaag gccgcaaaac
     2221 cggttcgggt tttgcggctt ttttatatgg gctgggcagc gtcaaggttt gccgtttgcc
     2281 ggataatgcg cggcaaatga ccggcgtgtt tatagcg
//
LOCUS       DAWKOX010000211         2313 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.211, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000211 DAWKOX010000000
VERSION     DAWKOX010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.211"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..572)
                     /locus_tag="WJK78_001916"
     CDS             complement(<1..572)
                     /locus_tag="WJK78_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ7598788.1"
                     /translation="MEHKLPQLPYELDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKR"
     gene            735..2141
                     /gene="dnaB"
                     /locus_tag="WJK78_001917"
     CDS             735..2141
                     /gene="dnaB"
                     /locus_tag="WJK78_001917"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ7598789.1"
                     /translation="MNDYTAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          570 a          592 c          618 g          533 t
ORIGIN      
        1 aaacgtttgg cgacttcgtc ccagttgacg atttcccaga aacctttcag gtagttagga
       61 cggctgttgc ggtagtcgat gtagtaggcg tgttcccaca cgtcgcaggt cagcagcggc
      121 gtgttttcag tggtcagcgg cgtagcggcg ttggaagtgg aaaccaaatc caatccgccg
      181 gcaggggttt ttaccagcca cgcccaaccg gagccgaaag taccggccgc gcaggcattg
      241 aacgcttctt ggaatttctc gaagctgccc catttcgcgt cgatggcggc ggccagttcg
      301 ccggaaggtt tgccttgacc tttgggcgtg aaacccagcc agtagaaagt gtggttccaa
      361 gtttgggctg cgttgttgaa cacgccgccc gaagattttt tcacaatctc ttccaaaggc
      421 aggttttcaa attcggtgcc tttgatttga ttgttcaggt tggtgatgta ggtttgatgg
      481 tgtttgccgt agtggaattc caaagtttct ttgctcagat gcggggacaa tgcgtccagt
      541 tcataaggca gttgcggcag cttatgttcc attttgtgct cctaatattg ttttaaatgt
      601 tgtattttgg cagtgttgct gcaaatagct cagcagcgca catattttac ctgttttgag
      661 ggatggaaac caattaaacc tgctttacgc tataatagaa ggttgcaatt tcggcacgac
      721 agataggatg taccatgaac gattacacag ctatgccgtc tgaagaccgt gaggtcggcg
      781 cattgtcgct gcctccacat tcgatggagg cggaacaatc cgttttgggc ggtttgatgc
      841 tggaaaatcc ggcttgggac aggattgccg atgtggtttc cggtgaagac ttctaccgcc
      901 acgaacaccg cctgattttc cgatccattg ctaaattaat caatgagagc cgtcccgccg
      961 atgtgattac ggttcaggaa gatttgcagc ggaacgaaga attggaagcg gcaggcggat
     1021 tcgaatatct gattacgctg gcgcaaaaca ccccgtctgc cgccaacatc cgccgctacg
     1081 ccgaaatcgt gcgcgagcgt tccatcatgc gccaactcgc cgaagtgggg acggaaatcg
     1141 cccgcagcgc atacaatccg caaggcaggg acgcggggca gcttttggac gaggcggaaa
     1201 acaaagtatt ccaaatcgcc gaaagcaccg ccaaatccaa gcagggcttt ttggagatgc
     1261 ccgatttgct gaaagaagtc gtacagcgca tcgatatgct ctactcgcgc gacaatcccg
     1321 atgaagttac cggcgtgccg acagggttca tcgacctcga caaaaaaacc tcgggtctgc
     1381 aacccggcga cctgattatc gttgccggtc gtccgtctat gggtaagacc gccttttcta
     1441 tcaatatcgc cgaacacgtt gccgtagaag gcaagctgcc ggttgccgtc ttctcaatgg
     1501 aaatgggcgg ggcgcaactg gtcatgcgta tgctcggctc ggtcggacgg ttggatcaaa
     1561 gcgttttgaa aaccggcagg ctcgaagacg aacactgggg tcgcctgaac gaagcagtcg
     1621 tcaaactctc cgacgcgccc gtgtacatcg acgagacccc gggtctgacc gcgctcgaac
     1681 tgcgcgcccg tgcccgccgt ctcgcccgtc aatttaacaa taagcttgga ttgattgtca
     1741 tcgactacct gcaactgatg gcaggatccg gccgttccga caaccgagct tcggagctgg
     1801 gagagatttc acgttcgctc aaagcgttgg cgaaagaatt gcaagtcccc atcatcgccc
     1861 tgtcgcaatt gagccgcacg gtcgaatcgc gtaccgacaa acgcccaatg atgtccgacc
     1921 ttcgcgagtc cggcgcaatc gagcaggatg ccgacctgat tatgttcatg taccgcgacg
     1981 aatactacaa ccaggactca cccatgaaag gccttgccga atgtatcatc ggcaaacacc
     2041 gcaacggtcc cgtcggtaaa atcttcctca catggacggg acaattcacc aaattcgaca
     2101 atgctgccta tattcccgag gaggcaaaga tagaggatta aatggctata taaaaattta
     2161 ttaggcgaaa tcaggcaaaa tcgtttaaaa tcatgctgag agattgccct aaaaaataaa
     2221 acgcggtctt gaggcatttt tgcattcagc ccgcatataa ttgaaaatat agtggattaa
     2281 caaaaatcag gacaaggcaa cgaagccgca gac
//
LOCUS       DAWKOX010000212         2285 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.212, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000212 DAWKOX010000000
VERSION     DAWKOX010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.212"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            20..748
                     /gene="rpe"
                     /locus_tag="WJK78_001918"
     CDS             20..748
                     /gene="rpe"
                     /locus_tag="WJK78_001918"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ7598790.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQV
                     RAMLDRYEEKSGRRIAIEVDGGIKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            complement(771..1802)
                     /gene="ruvB"
                     /locus_tag="WJK78_001919"
     CDS             complement(771..1802)
                     /gene="ruvB"
                     /locus_tag="WJK78_001919"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ7598791.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(1884..2192)
                     /locus_tag="WJK78_001920"
     CDS             complement(1884..2192)
                     /locus_tag="WJK78_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598792.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
BASE COUNT          461 a          534 c          737 g          553 t
ORIGIN      
        1 gatattgaag gaaaaaaaca tgactactta ccgtatcgca cccagcattt tatcggcaga
       61 ttttgcacgg cttggcgaag aggtggaaag cgtcattgcg gcaggtgcag atctgatcca
      121 ttttgacgtg atggacaacc attatgtgcc gaacctgacc ttcgggccta tggtttgcgc
      181 ggcgttgaag ccttatgcaa gcgtgccgat cgatgtgcat ctgatggtcg aacccgtgga
      241 tgacctgatt cagtcgtttg ccaaagcagg agcatcaatc atcacgttcc atcccgaagc
      301 gagccgccat attgaccgca gcttgagcct gattcgggac atgggctgtc aggcggggct
      361 ggtgttgaat ccggcaacgc ccgtatatct gttggaaaac gtattggaca ggctggatat
      421 ggttttgctg atgtcggtaa accccgggtt cggcggtcag agcttcattc cgtatacttt
      481 ggaaaaaatc agacaggttc gtgccatgct tgaccgctat gaagagaaaa gcggcagacg
      541 tattgccatt gaagtggacg gcggcatcaa aaccgacaat atcgccgccg ccgcccaagc
      601 cggcgcggat acctttgttg ccggttctgc gattttcggc aaaccagact ataaggcggt
      661 gattgatgcg atgagggcgg aactggaaaa aagcggcagg ctgaaccttg cgccaatgat
      721 tgaaatagaa atgccgtctg aaaattagct ctgtttcaga cggcattgcg ttatttttcg
      781 acgggcagcc cgaaatgcag gtaggcgcgt tcggtcgcca tcctgccgcg cggggtgcgt
      841 tgcaggaagc cttgttggat aaggtagggt tcgataacgt cttcgatggt gtctgtagat
      901 tcgccgatgg cggcggcaac attgtccaaa ccgaccgggc cgccgccgaa tttgtgcaaa
      961 acggcttcga gaaatttcct gtccatcacg tccagcccct gcgcgtccac gtccagcata
     1021 cttaaagcgg catcggcgat gccgccgtcg attgtgccgt tgtttttcac gtcggcgaaa
     1081 tcgcgcacgc gtcgcaacag gcggttggcg atgcgcggcg taccgcggct gcgtttggcg
     1141 atttcttccg cgccttcttc ggacatatcg agctgcaaca gttgtgccga acggctgacg
     1201 atggtggtaa ggtctcggtt ttcgtaaaac tcaaggcggg agacgatgcc gaagcggtcg
     1261 cgcaacggat tggtcagcat accggcgcgg gtggtcgcgc cgatgagcgt gaagggcggc
     1321 aggtcgattt tgacggaacg ggcggcgggt ccttcgccta tcataatgtc gagccggtag
     1381 tcttcgagcg cgggatagag gatttcttcg acaacagggc tgaggcggtg gatttcgtcg
     1441 atgaacaata catcgtgcgg atcaaggttg gtcaaaaggg cggcgaggtc gcctgcgcgt
     1501 tcgaggacgg ggccgctggt ttggcgcaaa tttacgccca attctttggc gatgatgtgc
     1561 gccagtgtgg ttttgcccag tccgggcggg ccgaagagca aaacgtggtc gagtgcttcg
     1621 ccgcgttttt tggcggcttg gatgaaaatg gcaagctgtt ctttggcttt gtcttgcccg
     1681 atgtagtcgt ccagcgtttt ggggcggagg gcgcgttcga gcagttcttc ctgtgcggag
     1741 gcggtttggg cggcaacgat gcgttgcggt tgcgcggcgg tcaggttgtc ggtttgcagc
     1801 atagtgttcc ctttgtcggg tatgccgtcc gaacggtcgg cggcgtttca gacggcattg
     1861 aaaagataac ggtcaaaagc gttttatccg cgggtttcgc gccaaacgag atagtcgcgc
     1921 aggggcggca taggcgggtt gatgcagtgg gggcagatgc cggtggtgtc ttcgtcgtcg
     1981 ctgtcgatgt ggtaggcgtt ggggtcgaag cggatttgct gcatgacggc ttgcgccaat
     2041 gcctgcgcct gaacaacgtc gaaattgaat ttttcgagga tttcgttcaa caggcggatt
     2101 tcgccaccgc taaattccgc actgtgtttg aggatgaggc gttgataatc ttcgttgttg
     2161 attttaggca ataaatcggt tttcagggtc atgattttat gtcgggggcg gaatggctga
     2221 agcgtgaatt atagcggata tggcggcggc tgttgcaaag cttggattgg gtatcgtcct
     2281 caaaa
//
LOCUS       DAWKOX010000213         2216 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.213, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000213 DAWKOX010000000
VERSION     DAWKOX010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.213"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            136..2016
                     /locus_tag="WJK78_001921"
     CDS             136..2016
                     /locus_tag="WJK78_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEZ7598793.1"
                     /translation="MNIFYEESGQFKIAAIVQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLALPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLDNGTKRVGIHIAAPS
                     LAIKQGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSG
                     FNAGEPTCKIEAVNIAKNLRIQAIEPHFNAETGLDEAGEMMFVHHQDLIWFHQFAVAL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVRHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
BASE COUNT          601 a          671 c          523 g          421 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataacgc aagcaccgca aagacgcgcc aaccctctcc
       61 caaccttttt tcagacggca ttttcggtaa tctgctaaaa tcgcccgctt gagtttccac
      121 agaaaaatcc gaaaaatgaa tattttttac gaagagtccg gccaattcaa aatcgccgcc
      181 atcgtccaaa aaaacgacgc cacctaccaa gtcgataccc cacacggcaa acgcaccaaa
      241 gtgaaggcga acaacgtctt tgccgagttt gacggcgata tggcggcgtt tttggaaaac
      301 gcgcaggcac aggcggcgga catcgacacc gatttattgt gggaagtatg cggcgaagag
      361 gaatttaccg ccgaagccat cgccgaagaa tattacggcc atgcgccgac caaaaccgag
      421 ctggcggcaa ctttgattgc gctttacgcc gcgccgatgt atttctacaa aaaagccaaa
      481 ggcgtgttca aagccgcgcc cgaagaaact ttaaaacaag cacttgccgc catcgaacgc
      541 aaaaaacagc aagacgcgca aatcgacgct tgggcggaag ccttgaaacg cggcgagatg
      601 ccgtctgaaa tcgcggcgga tttgaaaacc atcctgcacg cgcccgacaa gcagtcgctg
      661 acctacaaag cctttaccaa agccgccgac gcgctgaaaa cctctgccta cgaattggcg
      721 aaaaaaacgg gcggcattac gtccattccc caatacctgc aagacggatt tgaaatcaaa
      781 tacttcccca aaggaacagg cttccccgac cttgcccttc ctgaaatgcc cgacctgccc
      841 aaggctgacg ttaccgcctt ttccattgac gacgaatcga ccaccgaagt ggacgacgct
      901 ttaagcctga ccgacttgga caacggcacg aagcgcgtcg gcatccacat cgccgcgccg
      961 tcgcttgcca ttaaacaagg cgacaaaatg gaaaaaaaca tcatggaacg cttgagcacg
     1021 gtttatttcc ccggcggcaa aatcacgatg ctgcccgaaa actggatagc cgcgttcagc
     1081 cttgatgcag gcgcgtaccg tcctgccgtc agcatttatt ttgatgtgga cagcgggttc
     1141 aacgccggcg aaccgacctg caaaatcgaa gcggtcaaca tcgccaaaaa cctgcgcatc
     1201 caagccatcg agccgcattt caacgccgaa accggcttgg acgaagcagg cgaaatgatg
     1261 ttcgtccacc atcaagacct gatttggttc caccaatttg ccgtcgccct gcaaaaagca
     1321 cgcggcaaat acgagcccaa ccgtgcgccg caatacgatt acagcatcga attggataaa
     1381 gaagacaacg tatccgtcgt ccgccgcgaa cgcggttcgc ccatcgatac gctggtcagc
     1441 gagatgatga ttcttgccaa cagcacttgg gcgcaaatgc tccatgacaa cgacctgccc
     1501 ggcctcttcc gcgtccaacc caccggaaaa gtacgcatga gcaccaaatc cgagccgcat
     1561 atcggcatgg gcgtgcggca ttacggctgg tttacctcgc cgctgcgccg cgccgccgac
     1621 tacatcaacc aaaagcagct gatcagcctg atagacgaca ctgccgagcc gctgtatcaa
     1681 aacagcgatg ccgagctttt cgccgcactg cgcgactttg atgccgccta taccgcctac
     1741 gccgacttcc aacgccaaat ggaagcctac tggagcctgg tttacctgca acagcaaggc
     1801 acgagcgagc tgacggcgac gattctgaaa gaagacctcg tccgcatcga aggtctgccg
     1861 ctagtaacac gcgcgaccgg tattccgttt gacgcgctgc ccaaatcgca ggcattgttc
     1921 aaaatcaccg aattagatgc cgagaagcag tttgtctcgc tcaactacat caaggcagtc
     1981 gcacccgcgg gtacaacggc aggcaatgcc gtctgaagcc cgatacggca aactccggca
     2041 aaaacagaaa cctgaatctc atcattccca cagtcgggaa tccggttttt tgggtttccg
     2101 ttgtttttcc gtttcaatga acttccaagc cgccgttccc gataaatacc cgcaatctaa
     2161 aatcccgtca ttcccacgca gatgggaatc taggtttatc cgcacagaaa ctgata
//
LOCUS       DAWKOX010000214         2181 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.214, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000214 DAWKOX010000000
VERSION     DAWKOX010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.214"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            126..1235
                     /locus_tag="WJK78_001922"
     CDS             126..1235
                     /locus_tag="WJK78_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ7598794.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINKAFDLMHEGKSIRAVIHY"
     gene            1244..2071
                     /gene="fghA"
                     /locus_tag="WJK78_001923"
     CDS             1244..2071
                     /gene="fghA"
                     /locus_tag="WJK78_001923"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ7598795.1"
                     /translation="MKLIEQHQIFGGLQQVWAHDAQTLQCEMKFAVYLPNNSENQPLG
                     VIYWLSGLTCTEQNFITKSGFQLYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWATNYQMYDYILNELPDLVEANFSTNGKRSIMGHSMGGHGALVLALRNRK
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGEDREKWQQYDASSLIQQGYKVQGIRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
BASE COUNT          597 a          459 c          557 g          568 t
ORIGIN      
        1 cagtaaaaaa cacttgcctt agagttaact ctaaagtgta aactgttgct atgttgctca
       61 ggtaaggcaa ctttgtcaat gaattaagag gaaagacaat ggaaatgaaa caaaccgatt
      121 caagcatcaa atctcgtgcg gcggtggcat tcgcccctaa ccaaccctta caaattgtgg
      181 aaatcgacgt agaaatgccg cgtaaaggcg aggtgttaat ccgcaatacc cacactggcg
      241 tgtgccatac tgatgcgttt acattatcag gaagcgatcc tgaaggcgta ttccctgtgg
      301 tgcttggaca cgaaggtgcg ggtgtggtcg ttgctgtggg cgaaggtgtg tcaagcgtaa
      361 aaccgggtga tcacgtgatt ccgctttaca ccgccgaatg tggcgaatgt gagttttgtt
      421 gttcaggtaa aaccaacttg tgcgtctcag tgcgtgatac acaaggtaaa ggcttaatgc
      481 cggacggcac gacgcgtttt tcttatcaag gtcagccgat ttatcactat atgggctgtt
      541 cgactttcag tgaatactcc gttgttgccg aagtttcact ggcgaaaatc aaccctgaag
      601 ccaaccatga acaagtatgt ttgctcggct gcggcgttac cacaggtatt ggtgcggtac
      661 ataatacggc aaaagtgcaa gaaggcgact ctgttgccgt gtttggctta ggcgcgattg
      721 gtttggcggt ggtgcaaggt gcgcgtcaag ccaaagccgg ccgcattatc gccattgata
      781 ccaatccatc aaaatttgag ttggcaaaac agttcggtgc aacggattgt ttgaacccga
      841 acgattacga taaaccaatt aaagatgtgt tgttagacat caacaaatgg ggcattgacc
      901 atacctttga atgtatcggc aatgtaaacg taatgcgtca agcattagaa agtgcacatc
      961 gtggttgggg tcaatccatt atcatcggcg tagcaggtgc aggacaagaa atttcaacgc
     1021 gtccgttcca gttggtaaca ggccgtgtgt ggaaaggttc agcatttggc ggtgtgaaag
     1081 gtcgctctga actgccgaaa atggtggaag attcaatgaa aggcgacatt gagttagaac
     1141 cgtttgtaac ccacacaatg acactcgatc aaatcaataa agcctttgac ttaatgcacg
     1201 aaggtaaatc gatccgcgcc gttattcact actaaggtat gcgatgaaac tgattgaaca
     1261 acatcaaatt tttggcggtt tgcagcaagt ttgggctcat gatgcccaaa cgcttcaatg
     1321 cgagatgaaa tttgccgtct atttgccaaa taattcggaa aatcaaccgc ttggtgtgat
     1381 ttattggctt tccggcttga cgtgtacgga acaaaatttc attactaaat caggctttca
     1441 gctttatgca gcagaacatc aagtgattgt ggttgcccct gataccagcc ctcgcggaga
     1501 gcaagtgccg aacgatgcgg cttacgattt aggacaaggt gcgggctttt atcttaatgc
     1561 aactgagcag ccttgggcga cgaattatca aatgtatgat tatatcttga acgaattgcc
     1621 tgatttggtt gaagcaaatt tctctactaa cggcaaacgt tccattatgg ggcattcaat
     1681 gggcggacac ggtgcattgg tattggcact gcgaaatcgg aaacgttatc aaagcgtttc
     1741 tgctttttcg cctattttat cgccaagcct cgtgccttgg ggagaaaagg cctttactgc
     1801 ttatttaggg gaagatcgtg aaaaatggca gcaatatgat gccagctcgc tcattcaaca
     1861 aggctataaa gtgcaaggta tacgcattga tcagggcttg gaagatgagt ttttgccgac
     1921 acaattgcgt accgaagatt ttatcgaaac ctgtcgtgcg gcaaaccagc cggtcgatgt
     1981 gcgcttccac aaaggctacg accatagtta ttacttcatc gccagtttta ttggcgaaca
     2041 tattgcttat cacgccgcgt ttttgaagta aaccaaagag cgttcagtgt tcaaagcagt
     2101 tttgggatag ccggcacgag ggcggtaaga agtgccggca taaacgtatg ccgtctgagc
     2161 cggaaggagc cgactctacg g
//
LOCUS       DAWKOX010000215         2168 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.215, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000215 DAWKOX010000000
VERSION     DAWKOX010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.215"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            33..512
                     /locus_tag="WJK78_001924"
     CDS             33..512
                     /locus_tag="WJK78_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ7598796.1"
                     /translation="MPSETAIADITRTYSAHYLNPNNRNMSLFPQALPCLDKLKAQGY
                     WLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGKLGLDPKEA
                     LVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLGAPHLAVLDDLSELPGFLAQHYA"
     gene            complement(599..1567)
                     /gene="ispH"
                     /locus_tag="WJK78_001925"
                     /gene_synonym="lytB"
     CDS             complement(599..1567)
                     /gene="ispH"
                     /locus_tag="WJK78_001925"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ7598797.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVQQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     QEVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1596..2093)
                     /locus_tag="WJK78_001926"
     CDS             complement(1596..2093)
                     /locus_tag="WJK78_001926"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ7598798.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVTVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKY"
BASE COUNT          485 a          664 c          536 g          483 t
ORIGIN      
        1 gcctgcccga aatcatccgc gacctgctcg aaatgccgtc tgaaaccgcc attgccgaca
       61 tcacacgcac ttattccgca cattacctca atcccaacaa ccgcaatatg tccttatttc
      121 ctcaggcact gccctgtctg gacaagctca aagcacaagg atactggctt gccgtcgcca
      181 cgggcaaagg gcgggcgggt ttggacaacg ccatcagcca aaccgccacc ggcggctatt
      241 ggctcgccac cgcctgcgcg ggggaatatc cctccaaacc ctcgcccgaa atggtattcg
      301 gaatctgcgg caaactggga cttgacccga aagaggcatt ggtcgtcggc gatacggcgc
      361 acgacctgca tatggcggcg aacgcgggtg cggcggcagt cggcgttgcc accggcgcac
      421 attcgcgcga acagctcctt ggcgcaccgc atctcgccgt attggacgac ttgtccgaac
      481 tgcccggttt tcttgcacag cattacgcct gattggtttc cgcatccggc acgcggcaaa
      541 aatgccgtct gaagcctgtt cagacggcat ttgttttgcc caaacattca acgcttgctc
      601 aacgcttgca caaatcgggt ttggtttcgc cctcgcggcg caactctttg ggcaggacga
      661 acacgatgct ttcttccgca ccctcgcctt cgcgcacggt ttcatgcccc cacccgcgta
      721 tggttgccaa tacttcctgc accaacactt cgggcgcgga cgcgcctgcc gttacgccga
      781 ctttgttttt gccctcaaac catgcgcgtt gcaggtagcc tgcattatcc accatatacg
      841 catcgattcc gcgcgatgcc gccacttcgc gcaagcggtt gctgttagac gaattgggcg
      901 aaccgaccac aatcacgatg tcgcactgtt ctgccaactc tttgacggcg gtttgccggt
      961 tggtcgtcgc atagcagatg tcttccttgt gcggattgcg gatattgggg aaacgcgcgt
     1021 tcagcgcggc gatgatgtct ttggtttcat cgaccgagag cgtggtttgg ctgacatagg
     1081 cgagtttgtc ggggtttctg acttcgagtt ttgccacatc tcctaccgtt tcgaccaaaa
     1141 gcattttgcc cggcgcaagc tgccccatcg ttccttcgac ctcgacatga cccttatgcc
     1201 cgatcatgat gatttcacag tcttgggcat ccagtcgggc gacttcctta tgcactttcg
     1261 tcaccagcgg gcaagtcgca tcaaataccc ggaaaccacg ttccgccgct tcttgctgca
     1321 ccgccttcga tacgccgtgt gccgaataaa ccagcgtcgc gcccggcggc acttccgcca
     1381 agtcttcgat aaacaccgcg cctttttcac gcaggttatc gacgacgaat ttgttgtgga
     1441 cgacttcgtg gcgcacataa atcggcgcgc cgaattcttc caaagcacgt tcgacaatac
     1501 tgattgcccg atccacacca gcgcagaagc cgcgcggatt ggcaaggatg atggttttct
     1561 cgttcataag cccggtattt cgttttcaga cggcatcaat atttttcttc ttgggtttta
     1621 cggtggacga tgttgtccaa cactgccaac accgcaccga cgcagataaa gctgtcggca
     1681 atattaaagg cgggataaaa ccaattttgc caataaaaca ataagaaatc gacgacatga
     1741 ccgtgtatca ggcggtcgat gacattgcct aacgcaccgc cgataatcat tgccgcaccc
     1801 gttttgccga gggttgcaaa ctcatcgcgc aagatggcgc gtaccaaata cgcgctcacc
     1861 gtcaccgcca gcaccaaaaa aaagtatttt tgccagccgc cctgatcggc aaggaagctg
     1921 aacgccgcac ccgggttgta caccagcgtc aaatcgaaaa aggaaggaat gacattgacg
     1981 cgttcccgat actgaaacga cgacagcacc gcccacttcg accactggtc cagcacgatg
     2041 gcggcaagtg ccaataccca atagcgcgtt ttacttgaaa cagatgaaga catatttttc
     2101 aacagtcgga taaaagagtg ctattttacc cgaaaacccc ctgcctgtac ccgaaacggc
     2161 aaatgccg
//
LOCUS       DAWKOX010000216         2167 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.216, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000216 DAWKOX010000000
VERSION     DAWKOX010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.216"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="WJK78_001927"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="WJK78_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ7598799.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQVVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          541 a          622 c          562 g          442 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgcgccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgacacg ccgggacacg ccgacttcgg cggcgaagtg gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaata
      481 aaatcgacaa accgtccgcc cgtccgagct gggtcatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttatgct tccggtctgt
      601 ccggtttcgc caaattggaa gaaaccgacg agagcaacga catgcgtccg ctgttcgata
      661 ctatcttaaa atatacgcct gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg tatcggtcgt atcttgaacg
      781 gacgtatcaa gcccggtcaa gttgttgccg tcatgaacca cgatcaacaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gtttagaacg cgtgccgctt gaagaagccg
      901 aagccggcga catcgtgatt atttccggta ttgaagacat cggcatcggc gtaaccatca
      961 ccgacaaaga caaccccaaa ggcctgccga tgttgagcgt ggacgaaccg acgctgacca
     1021 tggactttat ggttaacacc agcccgttgg cgggtacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 acaccgccga tgccgacgtg ttccgcgtat ccggacgcgg cgagctgcac ctgaccattt
     1201 tgttggaaaa tatgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cttatgaaaa cctgactgtg gacgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga tggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggtttcca aggcgaattc atgaccctga cgcgcggtgt cgggctgatg agccacgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcccggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggcg gtcgcttacg ccttgtggaa tcttgaagac cgcggccgta
     1621 tgttcgtatc acccaacgac aaaatctacg aaggtatgat tatcggcatc cacagccgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgcgccagcg
     1741 gcaccgacga agccgtgcgc ctgaccacgc cgatcaagct gacgctggaa ggtgcggttg
     1801 agtttatcga cgatgacgaa ctcgttgaaa tcacgccgca atccatccgt ctgcgcaagc
     1861 gttacttgag cgaattggaa cgccgccgcc actttaaaaa gctggattga tgtttactgg
     1921 attaatgttt aaatgatacg cgatgccgtc tgaaaaattt cagacggcat tttttattcg
     1981 gacgggcttt gcggcttctt gaagctgttt cagacggcgt ttttcctacc caatcaagaa
     2041 actgccgcca tttttccagc ggtatatcgc cccgtcgcgt ttcggtatcg ggttcggctt
     2101 cccggcagca tgtcgaacaa tgccgtttga aggaatacgc cttttgagtc cttacaagct
     2161 taggaag
//
LOCUS       DAWKOX010000217         2154 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.217, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000217 DAWKOX010000000
VERSION     DAWKOX010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.217"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            125..1510
                     /locus_tag="WJK78_001928"
     CDS             125..1510
                     /locus_tag="WJK78_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ7598800.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            1530..2048
                     /locus_tag="WJK78_001929"
     CDS             1530..2048
                     /locus_tag="WJK78_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ7598801.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
BASE COUNT          459 a          651 c          578 g          466 t
ORIGIN      
        1 cgttcaaata aacaggaata taacttcaga caaacaactt accgcccgat ttgtgctatc
       61 gttttcgcac aacttaaaaa aacctgacaa ttttgtactt ttattacaga gaaaggcttt
      121 acaaatggac ggctggacac agacgctgtc cgcgcaaacc ctgttgggca tttcggcggc
      181 ggcaatcatc ctcattctga ttttaatcgt caaattccgc atccacgcgc tgctgacact
      241 ggtcatcgtc agcctgctga cggctttggc aaccggtttg cccacaggca gcattgtcaa
      301 cgacgtactg gtcaaaaact tcggcggcac gctcggcggc gtggcgcttc tggtcggcct
      361 gggcgcgatg ctcggacgtt tggtcgaaac atccggcggc gcacagtcgc tggcggacgc
      421 gctgatccgg atgttcggcg aaaaacgcgc accgttcgcg ctgggcgttg cctcgctgat
      481 tttcggcttc ccgattttct tcgatgccgg actaatcgtc atgctgccca tcgtgttcgc
      541 caccgcacgg cgcatgaaac aggacgtact gcccttcgcg cttgcctcca tcggcgcatt
      601 ttccgtcatg cacgtcttcc tgccgcccca tccgggcccg attgccgctt ccgaatttta
      661 cggcgcgaac atcggccaag ttttgatttt gggtctgccg accgccttca tcacatggta
      721 tttcagcggc tatatgctcg gcaaagtgtt ggggcgcacc atccatgttc ccgttcccga
      781 actgctcagc ggcggcacgc aagacaacga cctgccgaaa gaacctgcca aagcaggaac
      841 ggtcgtcgcc atcatgctga ttcccatgct gctgattttc ctgaataccg gcgtatcggc
      901 cctcatcagc gaaaaactcg taagtgcgga cgaaacctgg gttcagacgg caaaaataat
      961 cggttcgaca ccgatcgccc ttctgatttc cgtattggtc gcactgtttg tcttgggacg
     1021 caaacgcggc gaaagcggca gcgcgttgga aaaaaccgtg gacggcgcac tcgcccccgt
     1081 ctgttccgtg attctgatta ccggcgcggg cggtatgttc ggcggcgttt tgcgcgcttc
     1141 cggcatcggc aaggcactcg ccgacagcat ggcggatttg ggcattcccg tccttttggg
     1201 ctgtttcctt gtcgccttgg cactgcgtat cgcgcaaggt tcggcaaccg tcgccctgac
     1261 caccgccgcc gcgctgatgg ctcctgccgt tgccgccgcc ggctttaccg actggcagct
     1321 cgcctgtatc gtattggcaa cggcggcagg ttcggtcggt tgcagccact tcaacgactc
     1381 cggcttctgg ctggtcggcc gcctcttgga catggacgta ccgaccacgc tgaaaacctg
     1441 gacggtcaac caaaccctca tcgcactcat cggctttgcc ttgtccgcac tgctgttcgc
     1501 catcgtctga cagacggaaa ggatagtaaa tgactacgca ttttgtcgtt atgggcgtat
     1561 gcggctgcgg caagaccacc gccgcgctgt ccctgcagaa acacctcggt caatgtccct
     1621 atgccgaagg cgacgagttc cacacccaag ccaaccgcga caagatgggc gcgggtattc
     1681 cgctgaccga tgaagaccgc tatccgtggt tgggcaatct gcgcgactgg atgacgaaac
     1741 aggcgcaaaa cggtgcgaac cacaccatcg taacctgttc cgccctcaaa cgcggctacc
     1801 gcgacattct gcgcggagcc gaaggcaaag ctgccttcat ccacctcagt ccgccgcaag
     1861 acatcaacct cgagcgcatg atgtcgcgca aaggacatta catgaaagca gggatgctcg
     1921 attcgcaact ggaaatcctc gaggaactgg gcgaaggcga atacggggtc aaaatcgcca
     1981 accccggcac gcccgaagcg gtcgaagccg atattctgaa ctgggttgcc tcggaaaacc
     2041 tgctttgaag caatatgccg tctgaagccc gacacaggat gggtttcaga cggcataaac
     2101 atcgggaaca gaatggatta cattgattta tagtggatta acaaaaacca gtac
//
LOCUS       DAWKOX010000218         2135 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.218, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000218 DAWKOX010000000
VERSION     DAWKOX010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.218"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            373..885
                     /locus_tag="WJK78_001930"
     CDS             373..885
                     /locus_tag="WJK78_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ7598802.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAVAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            965..2044
                     /gene="aroB"
                     /locus_tag="WJK78_001931"
     CDS             965..2044
                     /gene="aroB"
                     /locus_tag="WJK78_001931"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ7598803.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          525 a          669 c          518 g          423 t
ORIGIN      
        1 ttcagcacct tagagaatcg ttctctttga gctaaggcga ggcaacgctg tactggtttt
       61 tgttaatcca ctatagtatt gataaacata ttatcttcaa tatattcaat tggataattg
      121 tttacctaag caaagataat tgccttttcc tgacaaataa gtgaaatcaa cggattgtca
      181 aaacacagcc tgaaataaaa aacctccctg atttctttta tttttcctta aaatcagaaa
      241 ggttcgggat ggtcgggtta tttttccaaa cgtaccgctg ccctgccgat ttcgtataaa
      301 attccgccgt aacccgacaa gcccgaaccc tgtcgccccg aaaggcgggg tgtcaaacat
      361 taaggaattg tgatgaaaaa ctttaacggc aaactcatcc tcatcggact gatgggcgcg
      421 ggcaaaacca cgctgggccg gcaaatggcg cagcggctgg attaccgttt ttacgacagc
      481 gatcacgaaa tcgccgtagc cgccggcgtt cccatcccca ccatatttga aatggaaggc
      541 gaacagggat tccgttcgcg cgaaaccgcc atactcaaaa agctggttat cctgccccat
      601 atcgtcctgt ccaccggcgg cggcgcggtg ttaaaagaag aaaaccgcgc ccttatccgc
      661 aaaagcggca cggtcgtcta tctgcacgcc ccgcccgaaa ccctgctcga acgcacgcgc
      721 tgcgacaaca gccgtccttt gctgcaagtt gccgatcctt tggcgaaatt acgtgaactc
      781 tacgccgcac gcgaccccgt ttaccgccaa accgccgact ttaccgtaga atcggcaaac
      841 tgccgggaaa ccgtgcaaac cctgctcaaa cgcttatccc gataaaccgg catatgcgcc
      901 gcgcccagaa aaccaagccg cgccccgccc ggcgggccgg cggttcaaac tttaaggaac
      961 aacaatgaaa acactgaccg tacacacccc gtcccacagc taccccatct ttatcggcaa
     1021 cgggctgctg ccgcaggcag gaagcctgct caaaccgcat ttgggcaaac gcgccgccat
     1081 catcgccaac gaaaccgtcg ccccgctcta cctcggcacg cttcagacgg cattggatgc
     1141 ggcaggcgta tcccatttca gcatcatcct gcccgacggc gaggcgcaca aaaactggca
     1201 gacgctcaac ctcatctttg acgggctgat gcaaaaccgc gccgaacgca aaaccacatt
     1261 aatcgcactg ggcggcggcg tgatcggcga catggtcggc tttgccgctg ccacctacca
     1321 gcgcggcgca ccgttcgttc aaataccgac cacactgttg agtcaagtcg actcatcggt
     1381 gggcggcaaa accgccatca accacccgct cggcaaaaat atgatcggcg cattctacca
     1441 gccgcaggcg gtgcttgccg acttggacac gctgcacacc ctgcccgtcc gcgaattgtc
     1501 cgccggtatg gcggaagtca tcaaatacgg cgcgctcggc gacatcggtt ttttcgaatg
     1561 gctcgaacaa aacatatccg gactgatgac gctcgatcgg gaaaaactcg cccaagccgt
     1621 gtaccgctgc tgccaaatga aggcagacat cgtcgcccaa gacgaaaccg aacagggcat
     1681 acgcgcatgg ctcaacctcg gacacacctt cggacacgcc attgaaaccg agatgggtta
     1741 cggcacttgg ctgcatggag aagccatcgc cgccggctgc gtgttggcgg cgcgtttgtc
     1801 cgaacaactg ggcaaaacct ccgccgcaga taccgcgcgg ctcgccgccc tgctcgaagc
     1861 cgccggactg ccgtccgcac cgcccgtgtt tgcctttgaa aaatggctcg aacatatgag
     1921 ccacgataaa aaagtcagcg gcggcatcat gcgctttatc ggtctgaacc ggctgggcga
     1981 agccaacatc accgaaatta ccgacacgga catcctccgc cgcaccctgc aaccgtatct
     2041 ctgatttcct ctgccaatgt gctgccgcgc gggtttgacg cacgatgatg attttccatc
     2101 atctttctcc gtaaaagcgg gaatccggtc cgttc
//
LOCUS       DAWKOX010000219         2102 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.219, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000219 DAWKOX010000000
VERSION     DAWKOX010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2102
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.219"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>2102
                     /locus_tag="WJK78_001932"
     CDS             <1..>2102
                     /locus_tag="WJK78_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ7598804.1"
                     /translation="NKQNPNPKSQAPSPALTAPALWFGPVQNGKVQMYSASVSTYPDS
                     SSSRIFLQNLKRKNDPNKPGRYSLADLSALDIQSKEPTFTGRQTIIRLDGGVRHIQLD
                     KSNEATGLNGNDGKNETFGIVSEGSFMPDTSEWKKVLLPWTVRDSADDSKFKAFNKEE
                     NNGNKPKYSQKYRIRDNGNNNNRNLGDIVNSPIVAVGEYLATSANDGMVHIFKKGNGG
                     DDRSYNLKLSYIPGTMPRKDIESKESTLAKELRAFAEKGYVGDRYGVDGGFVLRKVER
                     NGKDHVFMFGAMGFGGRGAYALDLTKIDSNNLTGVSMFDVPNDKNNNKNDNNRVELGY
                     TVGTPQIGKTHDGKYAAFLASGYATKTIDDQQNKTALYVYDLESSGTLIKKIDVPGGK
                     GGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSSDNPSSWTVRTIFSGNKPITSAP
                     AISQLKDKRVVIFGTGSDLSEDDVDKTDEQYIYGIFDDDTATTGPVNVSGTGGGLLEQ
                     VLTEENKTLFLTDYKRSDGSGSKGWVVKLKDGQRVTVKPTVVLRTAFVTIRKYKDNGC
                     GAETAILGINTADGGKLTKKSARPIVPADNTAVAQYSGHKQTTKGKSIPIGCMEKDNG
                     IVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGIDPDGKRSGKNNRCFSQKGV
                     RTLLMNDLDSLDITGPTC"
BASE COUNT          602 a          549 c          544 g          407 t
ORIGIN      
        1 tcaacaaaca gaacccaaat cccaaatccc aagccccttc ccccgcactg actgcccccg
       61 cgctgtggtt cggacctgtg caaaatggta aggtgcagat gtattccgct tcggtttcca
      121 cctaccccga cagttcgagc agccgcatct tccttcaaaa tctgaaaaga aaaaacgacc
      181 ccaacaaacc cggccgctat tccctcgcag acttgagtgc gttggatatt caaagtaaag
      241 agccgacttt cacagggcgg caaacaatca tccgattgga tggcggcgta cggcatatcc
      301 aactggataa aagcaatgag gccaccggtt taaatggaaa tgacggcaaa aacgaaactt
      361 tcggcattgt tagcgaaggg agcttcatgc ctgataccag cgagtggaaa aaagtattgc
      421 tgccttggac ggttcgggat tctgctgatg acagtaaatt taaagcattc aacaaagaag
      481 aaaacaacgg caacaagcca aaatacagtc aaaaataccg catccgcgac aacggcaaca
      541 acaacaatcg caatttgggc gacatcgtca acagcccgat tgtggcggtc ggcgagtatt
      601 tggctacttc cgccaacgac gggatggtgc atatcttcaa aaaaggcaac ggcggggatg
      661 accgcagcta caatctgaag ctcagctaca tccccggcac gatgccgcgc aaggatattg
      721 aaagcaaaga atccaccctc gccaaagagc tgcgcgcctt tgccgaaaaa ggctatgtgg
      781 gcgaccgcta cggcgtggac ggcggctttg tcttgcgcaa agtcgaacgg aacgggaaag
      841 accatgtgtt tatgttcggc gcgatgggct ttggcggcag aggcgcgtat gccttggatt
      901 tgaccaaaat cgacagcaat aacctgaccg gcgtttccat gtttgatgtc ccaaacgaca
      961 aaaataacaa taagaatgac aataatcgcg tggaattagg ctacaccgtc ggcacaccgc
     1021 aaatcggcaa aacccacgac ggcaaatacg ccgctttcct cgcctccggt tatgcgacta
     1081 aaaccattga cgaccaacaa aataaaaccg cgctgtatgt gtatgatttg gaaagcagcg
     1141 gtacgctgat taaaaaaatc gatgtacccg gcggcaaggg cgggctttcg tcccccacgc
     1201 tggtggataa agatttggac ggcattgtcg atatcgccta tgccggcgat cgcggcggga
     1261 atatgtaccg ctttgatttg agcagcgaca atccgtccag ctggactgta cgcactattt
     1321 tcagcggcaa caaaccgatt acttccgcgc ccgccatttc ccaactgaaa gacaaacgcg
     1381 tggttatctt cggcacgggc agcgatttga gtgaggatga tgttgataaa acggacgaac
     1441 aatatattta cggtatcttt gacgacgata cggcgacgac gggtcctgta aacgtcagcg
     1501 gtacgggagg cgggctgctc gagcaagtgc ttactgagga aaataaaacc ttattcctga
     1561 ccgattacaa gcgatccgac ggctcgggca gcaaagggtg ggtagtgaaa ttgaaggacg
     1621 gacagcgcgt taccgtcaaa ccgaccgtgg tattgcgtac cgcctttgta accatccgca
     1681 aatataaaga caacggctgc ggcgcggaaa ccgccatttt gggcatcaat accgccgacg
     1741 gcggcaagct gaccaagaaa agcgcgcgcc cgattgtgcc ggccgacaat acggctgtcg
     1801 cgcaatattc cggccataag caaaccacca aaggcaaatc catccctata ggttgtatgg
     1861 aaaaagacaa tggaatcgtc tgcccgaacg gatatgttta cgacaaaccg gttaatgtgc
     1921 gttatctgga tgaaaagaaa acagacggat tttcaacaac ggcagacggc gatgcgggcg
     1981 gcagcggtat agaccccgac ggcaagcgtt ccggcaaaaa caaccgctgc ttctcccaaa
     2041 aaggggtgcg caccctgctg atgaacgatt tggacagctt ggacattacc ggcccgacgt
     2101 gc
//
LOCUS       DAWKOX010000220         2044 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.220, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000220 DAWKOX010000000
VERSION     DAWKOX010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.220"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(205..>2044)
                     /locus_tag="WJK78_001933"
     CDS             complement(205..>2044)
                     /locus_tag="WJK78_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ7598805.1"
                     /translation="LSNLQLPCILHWNLNHFVVLCSISKDSIVIMDPAVGMRKIKMDE
                     VSQKFTGIALELFPNTHFEEKKETKKIKILSLLRGISGLKRSLIQMLILAISLEVFAL
                     VSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLAILQQLISLLQAWVGMHLSTTLNLQW
                     KANIFKRLLDLPNDYFSKRHLGDVISRFGSIDHIQETLTSTFFVLVLNSLMAVFTFVL
                     MTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNATEENIVHEAKQNSYFMETIRGIQSV
                     KLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSALFEFSNKLLFSMENIIIIYLGASAIL
                     DGSFTVGVLMAFLAYKGQFESRTASLVDQYIQIKMLGLHAERLADITLNETETEIIKY
                     NHIPKLDNEQLVLKVENVSFRYADNEPYLFENINLEFKDNEAVVLTGQSGRGKSTLLN
                     ILTGSLKPETGTVSINGHDIYQVSPSFIRGLSGIVRQDDVLFAGSIGENISFFDESPN
                     MELIEQCAKMAQIHDDILKMPMGYETLIGDMGNILSGGQKQRVILARALYKRPKILFL
                     DEASSHLDVENEQKINHNLKSLGIMKIMVAHRQETIQSADKILNLG"
BASE COUNT          692 a          351 c          336 g          665 t
ORIGIN      
        1 accgtgaaat tagcccaaaa atgggaacaa gagcagaaaa aacaacaaat tcaacagaaa
       61 aaggaaactg aaaaatcgcc aaaacacaaa gccagtcgtg atgattggga aatggaacgt
      121 taaaccgcta ttttcatgta ttctattaaa ttatttgaaa aaagacttca ctttttgtta
      181 aagaaaaatg aagtcttgtt ctgttcaacc taaattcaga attttatctg ccgattgaat
      241 tgtttcttgg cggtgtgcaa ccattatttt cataatacca agacttttta ggttatggtt
      301 aattttttgt tcattttcta catctaaatg gctacttgct tcgtctaaaa atagaatttt
      361 gggtcgttta tacaatgcac gagccaagat aactctctgc ttttgtccac ctgataagat
      421 atttcccata tcgccaatca aggtctcata gcccattggc attttaagta tatcgtcatg
      481 tatttgtgcc atttttgcac attgttcaat gagctccata tttgggcttt catcaaaaaa
      541 tgaaatattt tccccaatag aacctgcaaa aaggacatca tcttggcgaa caatcccgct
      601 caatccccta ataaaggatg gagaaacttg atatatatca tgcccattaa tactaactgt
      661 accagtttca ggttttaggc tacctgttaa aatgtttaac aaagtggact tcccccgacc
      721 agattgtcct gttaaaacaa ctgcttcatt atctttaaat tccaaattaa tgttttcaaa
      781 aagatatggc tcattatcag catatctgaa tgagacgttt tcaactttaa gaaccagttg
      841 ttcattatct aatttaggta tatgattata cttaataatt tcagtttctg tttcatttaa
      901 agtaatgtca gccaaacgtt cagcatgaag ccctaacatt ttgatttgga tgtattggtc
      961 aacgagagaa gctgttctgc tttcaaattg ccctttataa gccaaaaaag ccatcagaac
     1021 accgactgta aatgaaccat ctaaaattgc gcttgcacca agataaatta tgataatatt
     1081 ttccatgcta aacaacagtt tatttgaaaa ttcaaataaa gcagagagtt tatctgttgt
     1141 cagcttggta ttgactgtat tcacaaatag gctcatccaa gtgccatgtc tttgataatg
     1201 tttatcaaat aatttaactg attggatacc acgaatggtt tccatgaaat atgagttttg
     1261 tttggcttca tgaacaatat tttcttctgt tgcatttctt aatgggtaat atgcaagcca
     1321 acgaattagt atgtacaaaa caagtgttaa aagaacaatc agcgataatt gagtgctgta
     1381 aattgtcatt aacacgaaag taaaaacagc cattaagcta tttaaaacta aaacaaaaaa
     1441 agtagaagtt agtgtttctt ggatatgatc tattgaacca aatcttgaaa tcacatctcc
     1501 taaatgtcgt ttactgaaat agtcattagg taagtcaagt aaccttttaa atatattggc
     1561 tttccattgt aaattaagag ttgtagatag gtgcatacct acccatgctt gtaacaggct
     1621 aattaactgt tgcaggatag ccagtaaacc aaatcccaaa gtaagggtca gtaataaatt
     1681 tttatcagca gttacaatga catggtctat tacccattgc ataaagaatg gactaaccaa
     1741 tgcaaagact tccaaagaaa tagctaatat aagcatttga attaaagagc gttttaagcc
     1801 tgaaatcccc cttaatagag ataatatttt gattttcttt gtttcttttt tctcttcaaa
     1861 atgggtattg gggaataatt ctagggcaat ccctgtgaat ttttgtgaaa cttcgtccat
     1921 tttgattttt cgcataccga cagcagggtc cataatgacg atactgtctt tggaaatgga
     1981 acaaagtaca acaaaatggt ttaagttcca atggagaatg cagggtagtt gtaaatttga
     2041 cagc
//
LOCUS       DAWKOX010000221         2023 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.221, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000221 DAWKOX010000000
VERSION     DAWKOX010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.221"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..1192
                     /locus_tag="WJK78_001934"
     CDS             <1..1192
                     /locus_tag="WJK78_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ7598806.1"
                     /translation="TLTAKEREQILAYSKLVAGTVSGVVGGDVNTAANAAKVAIENNL
                     LSQEEYALREKLIKKAKGKGLLSLDWGSLTEQEARQFIYLIEKDRYSNQLLDRYQKNP
                     SSLNNQEKNILAYFINQTSGGNTAWAASILKTPQSMGNLTIPSKDINNTLSKAYQTLS
                     RYDSFDYKSAVAAQPALYLLNGPLGFSVKAATVAAGGYNIGQGAKAISNGEYLHGTVQ
                     VVNGTLMVAGSVSAQAAISAKPAPVTRYLSNDSAPALRQALTAESQRIRMKLPEEYRQ
                     IGNLAIAKIDVKGLPQRMEAFSSFQKGEHGFISLPETKIFKPISVDKYHNIASPPRGT
                     LRNIDGEYKLLETIAQQLGNNRNVSGRIDLFTELKACQSCSNVILEFRNRYPNIQLNI
                     FTGK"
     gene            1197..1580
                     /locus_tag="WJK78_001935"
     CDS             1197..1580
                     /locus_tag="WJK78_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598807.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            1830..>2023
                     /locus_tag="WJK78_001936"
     CDS             1830..>2023
                     /locus_tag="WJK78_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ7598808.1"
                     /translation="MLKTPPMLAAELSGKTGVSISAPYANENSRIILSAADIAAENGK
                     IKLQSYGDQSYYAGQGELYT"
BASE COUNT          700 a          381 c          390 g          552 t
ORIGIN      
        1 cactttgaca gctaaagaac gcgaacagat tttggcatac agcaaactgg ttgccggtac
       61 ggtaagcggt gtggtcggcg gcgatgtgaa tacagcggcg aatgcggcta aagtcgcgat
      121 tgaaaataac ctattatctc aagaagagta tgctcttaga gaaaaattga tcaaaaaagc
      181 caaagggaaa ggcctattat ctttagattg gggcagcctg accgaacaag aggcaaggca
      241 gtttatctat ttgattgaga aagatcgata ttctaatcaa ttgcttgacc gatatcaaaa
      301 aaatccaagt agtttaaata atcaagaaaa aaatattctt gcatatttta ttaaccaaac
      361 ctctggaggt aacacagctt gggcagcttc gatactgaaa acgccccagt caatgggtaa
      421 tctcactatt ccttccaaag atattaataa caccttatcg aaagcctatc aaacattgag
      481 tcgttatgat tcttttgatt acaaatcagc tgttgccgca caacctgcac tttacttatt
      541 aaacggaccg cttggcttca gtgtcaaagc agctactgtg gcagcaggag gatataacat
      601 tggacaggga gcgaaagcaa tctctaatgg agaatatctg catggtacag ttcaggttgt
      661 taatggcaca ttgatggttg caggatctgt atctgcacag gctgcaatat cggccaagcc
      721 tgcacctgtt acccgttatc tgagcaatga cagtgctcct gctttaagac aagctttaac
      781 tgctgaaagc cagagaatcc gcatgaaact gccggaagag tatcgacaaa tagggaatct
      841 tgcgatagca aaaattgatg ttaaaggatt accgcaaagg atggaagcat ttagttcttt
      901 ccaaaaaggg gaacatggat ttatttcgtt acctgaaaca aaaattttta aacctatatc
      961 tgttgataaa tatcataata ttgcctctcc tcctagagga acattaagaa atatagatgg
     1021 agaatataaa ttacttgaaa ctatagcaca gcaactcgga aataatcgta atgtatcagg
     1081 tagaattgat ctatttacag aattaaaggc ctgtcaatct tgcagcaatg ttattttaga
     1141 gtttagaaat cgctatccaa atattcaatt aaatattttt acaggaaaat agaatcatgg
     1201 aaaaaataaa aaattatata gaattcaaga aattatttaa aaatataacg gaaaaatttg
     1261 tcagagattt agatataaca ttaattgaag cagctgaata ttctataatt gaattcgaaa
     1321 tttatttatc tgaatatccg gaagatagta catttatttt tacagcatgg gcaatctatc
     1381 tgttagaaaa taactgtctc aatgaaagag gaaaagataa ttttttcatc gcggaaatga
     1441 aaaaatgtta tcaacaaact aatttggata gaataaaatc tatctattct tcgagtgact
     1501 atcatatttt tgctaaggat gtaaacaaga ttcaacaaac atttaaatta aatcttgcca
     1561 atatcatgca gcaagagtag caactgtatt tttaaccccg tcgggcaaaa ttaccaaaaa
     1621 cggtaaatca ctaaaaatac ttttataccg ccgccgcagc aagctgtagc ctgcatgaaa
     1681 cctaaaatcc atgcgtaagg tgtgtgctcc agcacgcacg cgttccatga tttacggctc
     1741 aatgccgtct gaaaagctca caatttttca gacggcattt gttatgcaag taaatattca
     1801 gattccctat atactgccca gatgcgtgcg tgctgaagac accccctatg cttgctgcag
     1861 aactttcggg taaaaccggt gtgagcatta gcgcaccgta tgccaatgag aacagccgca
     1921 tcattttgag tgccgccgat atagccgcag aaaacggcaa aatcaaactg caatcctacg
     1981 gcgaccaatc ctattacgcc ggacagggcg aactctatac ctt
//
LOCUS       DAWKOX010000222         2019 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.222, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000222 DAWKOX010000000
VERSION     DAWKOX010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2019)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2019)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2019
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.222"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..848)
                     /gene="mafB"
                     /locus_tag="WJK78_001937"
     CDS             complement(<1..848)
                     /gene="mafB"
                     /locus_tag="WJK78_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ7598809.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDHHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WGNRMDDIRGIIQGAANPFLTGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLS
                     PEAQLAA"
     gene            complement(888..1850)
                     /gene="mafA"
                     /locus_tag="WJK78_001938"
     CDS             complement(888..1850)
                     /gene="mafA"
                     /locus_tag="WJK78_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ7598810.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSKSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVEADNSHEGYGYSDEVVRQHRQGQP"
BASE COUNT          490 a          458 c          469 g          602 t
ORIGIN      
        1 gccgcaagtt gtgcttccgg acttaaattt cctaaattgt gaataccctg taaagttttc
       61 cgtgctgccg cataggttac cgggtttacc gcactgtctg taattgcccc aactcccaat
      121 ccctgaaaac ccgttagaaa aggattggct gcaccttgga tgatgccgcg aatatcatcc
      181 atacggttac cccaccaatt tttattgggg tcgctttccc atatcagttt tcctgcttca
      241 tccgcacggc tgaaaaaacc agaggcggca ccggcatttt cttttagcca acggtctgaa
      301 aatggggctt gagggacaat attagtcttt gtttttgttg aagttccttt gacatagtag
      361 ctgtatatat cccttgctcc tccggggggc ggataatcgc tgccttgcgg tccgtcatat
      421 ccatcctccg gatggatttc cgaccctgtc cgatgaagtt ggtaaacagt aaaaccgccg
      481 tctacaccgc cgctgaaatc agaagtgctt tttgaatcat gatgatcgaa cggactgtgt
      541 acttcatgtc cgtgccctga aaaatgggtt tcatagccga taacaccttc aaaccctgtc
      601 cgttcgtgtg taataggcag tatggggccg accgcagttg catcaaatgt ttggacggcg
      661 taaacccgat ttttaacact gccgcgacca tcaccgaaca gatggtattt gccacccggt
      721 tcgtagtgtt ttgcctgcat atcatcgcgc aaacgggcat ccaaaccgtt cgcatgacta
      781 atggggattt gcagcaacga tattgctgct gcaaacagca tcatgaattt ttgaataggc
      841 aaattcattt tgttttcctt ggtagcaagc ggttatggta gtgtgaatca aggttgccct
      901 tgtctatgtt gtcgcactac ttcatcgctg tatccatacc cctcatgact gttatcagcc
      961 tctacggatg gggcagagtt acccgtatga ttgccgtatg gtcggatatc ggagaaatcg
     1021 accattaatc cttccgtcgg tttaattcct ttgcttactt tatacggccc catccacaat
     1081 gcgtaatttt ctttataggc agcttcaaac gcattggttt tgggtttgat gagcaatttt
     1141 ttattggttc tgtctactgc gaaatattcc agttttgttt gggctttcag tgtttcggca
     1201 ttgtataggt gcatttcggt tctgttgcgt atcgttccga atacgtcgat gttaataaac
     1261 acatctgtat cggcattggc aggagaaaca acgtctatgc cgcgcaggaa aaatacggtc
     1321 tgtaccaagt gggaaagaaa ggcagtgtcg cgcgggttag tcgtcaaggt ttcatttcga
     1381 taatccccca tcccgccaat atttaagccc agactgcttt tacttccgct accgtctgat
     1441 tgggtgcgag agcgtgcagg ggcattaagt gtagataaag aagtggttaa acctgtcaaa
     1501 ccgcctgatg ttgtttcagc ggtggtttcg taacgtggat aggtgtaatc ggtacggacg
     1561 gcagggctgt ttatgtattc gccacgaatc agtgcatcaa tggagtagcg accccctgtc
     1621 aaactgcctg aaccttggtc gcccatagtt gcaatgtaca atgcaacttt tcgtccgtgt
     1681 aatgcctgta aatccatgtc tttaacggca gctctggcag aagcggccac aagttcttgt
     1741 tcgaccgcaa agcgtttacc tccgccatgc gatggaatac ctgtcagtgt cccgcaggcg
     1801 gataaaataa aaactgaaaa aagaataggt atcagcagcc gtgcttgcat agattttctc
     1861 ctttgatgaa aaacaaattg tatcaaaatt gtaaacaaat tataaattaa ataaaatatt
     1921 tctttactgg ttttgtggtt tggttttcaa taggctgccc gcacatagtg ggatttacgg
     1981 ttgcaatggc tgcggcgtat tttatagtgg attaaattt
//
LOCUS       DAWKOX010000223         1944 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.223, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000223 DAWKOX010000000
VERSION     DAWKOX010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1944
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.223"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            244..1701
                     /locus_tag="WJK78_001939"
     CDS             244..1701
                     /locus_tag="WJK78_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ7598811.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPIVPHPLSK
                     GQGKTAAAVGIALIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKCYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          436 a          579 c          445 g          484 t
ORIGIN      
        1 ccgccctatc ggataagccc ttaacagaaa aggctttacc cgcgccgtat cggaacacat
       61 cctctaaaat acaatccgtt gaattgaaaa aaatataaaa acatccgccc gcgaaaaacg
      121 gcagcgcgtc gtttgacaaa gaatgaaaat atcggttaaa aaccgatttt catacaaaaa
      181 acaccgctgc cgtccgcatc cgtttcagac ggtattgaga gaaaatcttt taggagaacc
      241 tttatgtccc ggcatcccgc ccccaccgga gaaaaaacat tcttcggcca ccccttccag
      301 ctttccaccc tcttccatat cgaattgtgg gaacgttttt cattttacgg aatgcagggc
      361 atcctgctga tttacctcta ctacaccgcc gacaaaggcg gcttgggcat agacaaaacc
      421 ctcgccggcg gcattgtcgg cgcatacagc ggcagcgtgt acctgtccac cattttgggg
      481 gcgtggtttg ccgaccgagt atggggtgcg gaaaaaaccc tcttcctctc gggcatcgtc
      541 gtgatgctcg gacacatcgt ccttgccgcc gccccgggcc tgtacggcct tttaatcggg
      601 ctgatattca tcgcattggg cagcggcggc gtgaaatcta cggccagttc tatggtgggc
      661 gcattatacg aacaggacga aatgcggccg ctgcgcgatg cgggattttc cattttctac
      721 atcgccatca atatcggcgg cttcctaggc ccgctgctga ccggcctgct gcaggaaaac
      781 atcggtttcc attatggttt cggcgcggcg gcggtcggta tggcattcgg cttgtggcgt
      841 tattccttgg gacgtaaaaa cctgccccat cccatcgtcc cccatccgct ttcaaaagga
      901 cagggcaaaa ctgcggccgc cgtcggcatt gctctcatcg ccgcacttgc aaccgccatc
      961 aaaaccgggc ttgtcaacct cgacaatttc tccggcatcc tcttatctac cgtcatcctt
     1021 gccgtcattg cctattttgc ccgcctgctg actaatcccc gcgtcagttc cgacaacaaa
     1081 cggcacatca tcgcctacat cccgcttttc ctgaccatct gtatgttttg ggccgtctgg
     1141 tttcagattt acaccgtagc aaccgtctat ttcgacgaaa ccgtcaaccg caccatcggt
     1201 tcgtttaccg tacccgtcgc ctggaaagat tccatgcaaa gcctgtgggt catcctgttt
     1261 tccggactga tggcggcaat gtggacaaaa atggggcgca aacagcccaa aaccccgctg
     1321 aaattcgcta tggcggtatt tgttaccggc gcgtcgtttt tgggattcgt cccctttatt
     1381 tccgccggca cgccgatgcc tattgcggtt ttcgcactga ttgtccttgc catcacgata
     1441 ggcgaactga tgatttcccc gattgcgctg tccatctcca ccaaaatcgc accgccttta
     1501 ttcaaaaccc aaatggtcgc ccttaatttc cttgcctttt cattaggctt cactttgggc
     1561 ggcgtattgt ttgaaaaatg ctatcaggcg ggcgacgaaa tcggcttcta tcggctgctg
     1621 ttctacatcg gcgcagccac aggcttcctg ctgctcctgc tcgtccccaa attgaacaaa
     1681 atgctcgaag gcacagacta agtcccgccc cgatgccgtc tgaacccttc agacggcatt
     1741 tttccgcata atgaaaccaa accgtttcca cccgacagga caggctcccc ccaaccggaa
     1801 ggcagcctgc cgattgtcat ttaaatatct gactgattcc gtctgtttgc aagggaaata
     1861 gccgtttatt tccgcttggg cggaaaccgg ttctattgag taaaaggcat tttatccgac
     1921 taaattagtg ctgcatcaac ggaa
//
LOCUS       DAWKOX010000224         1905 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.224, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000224 DAWKOX010000000
VERSION     DAWKOX010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1905
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.224"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(217..1035)
                     /gene="cysE"
                     /locus_tag="WJK78_001940"
     CDS             complement(217..1035)
                     /gene="cysE"
                     /locus_tag="WJK78_001940"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ7598812.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            1219..1797
                     /gene="grpE"
                     /locus_tag="WJK78_001941"
     CDS             1219..1797
                     /gene="grpE"
                     /locus_tag="WJK78_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ7598813.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
BASE COUNT          436 a          435 c          580 g          454 t
ORIGIN      
        1 ttccgtacta tccgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
       61 tatatttccg gttgcgtggg aatcgggtgt attgaataaa aggcattttg tccgactggc
      121 aagtgccgac atcggcggca tatcaaggcg caggcttgaa gcgggcaatg tcgtctgaag
      181 cccgtttggc gtttcagacg gcattggtgc ggatattcaa atcataaagt cgatttcggt
      241 aaactggata ttttgatcca tatccgccga cggtgttttg agcgatcgcg ccacgggttt
      301 ggcgggtacg ccgacaaccg tgatggacgg cggcacgtct gaaaccacga cgctgcccgc
      361 cccgattttg gcattgctgc cgatgcggat attgcccaat atcgaggcgt ttgcgccgat
      421 catcacgccg tcgccgattt tagggtggcg gtcgccgcct tctttgcccg aaccgccgag
      481 cgttacgccg tgcaaaatcg aaatattgtt gcccaacacg gcggtttcgc cggcaacaaa
      541 gccggtggcg tggtcgagca tcagcccgta tccgaaacgg gcggcgggat ggatgtccac
      601 gccgaatact tcggacatac ggttttgcag gaaatacgcc agcgttttgc gcccgtcgag
      661 atacagccga tggttgatgc ggtgtgcctg aatcgcgtgg aagcctttga aatataaaag
      721 cggcagcgaa tattcgtcgc aggcgggatc gcgttcgtag atggctttta agtctgcttc
      781 gacgcatttg ccgatttggg tgtcgctgcc caacgcctgc tggtagattt caaacagcgc
      841 gcgcacgtcc ataatcgggc tgccgagttt gctggaaagg tggtaggcaa ggacggagcc
      901 gagggactcg tggcgcaaca cggtttggtg caaaaaactt gccagcatcg gttcggcgga
      961 gaccgcggcc gcggtttctt cgcggatggt gtgccagagg tcgaaaccgg ttgtgtttaa
     1021 atggtctttt ttcatgagtg atgacgtttg aaaatcgata tggtcggcag tatcttaccg
     1081 tctatattat tttttcggta ggggatttga aaatgaattt gaaattctct gcttttgctt
     1141 gaagtttctt gaaaatgtcc ttatcttgcg cgggtaataa ctggattttg atttccaatt
     1201 tgttttaagg gatacgatat gagcgaacag acacagcagc aaaacagtga agaagcggtt
     1261 gaaaatgtgg aggcggtgga aaccgtcgag acagtaggaa atgcggacgg tgtgcaggaa
     1321 caggctgccg cagagccggc ttatgaggat ttgcaggcgc ggattgccga gctggaagcg
     1381 cagttgaaag acgagcagct gcgcgctttg gcaaacgagc aaaacctgcg ccgccgccac
     1441 cagcaggaaa ttgcggatac gcacaagttc gccggacaga agtttgccgt ggaaatgctg
     1501 ccggtcaagg attatctgga aatggcgctt ttggatcaga gcggcaattt cgatgcgctg
     1561 aaaatgggcg tgcagatgac tttgaacgag ttgcagaaag catttgatgc tacgcaaatc
     1621 aaggaaatca accctaaagc gggcgataag ctcgatccga atatccatca ggcgatgcag
     1681 gcggtggcaa gcgaacagga gccgaatacc gtggtgggtg tgatgaagaa gggttatacg
     1741 ctgtccgacc gcgtgttgcg cccggctatg gttacggtgg cgcagaagga agcctgaagg
     1801 cgtctgggga ataatctgat ttatttcctg aagcgcgttt tgcgtataaa ccgatcgaag
     1861 taaagcggca atgccgtctg aacccgcctg tcgggcttca gacgg
//
LOCUS       DAWKOX010000225         1876 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.225, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000225 DAWKOX010000000
VERSION     DAWKOX010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1876
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.225"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(338..769)
                     /locus_tag="WJK78_001942"
     CDS             complement(338..769)
                     /locus_tag="WJK78_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598814.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTSCSLHET"
     gene            complement(785..>1876)
                     /locus_tag="WJK78_001943"
     CDS             complement(785..>1876)
                     /locus_tag="WJK78_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ7598815.1"
                     /translation="TLTAKEREQILAYSKLVAGTVSGVVGGDVNAAANAAEVAVKNNQ
                     LSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNVADKRLAASIAICTDISRSTECR
                     TIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSYTQADLALQSYHLNTAAKSWLQS
                     GNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQNTPITNVKYPEGISFDTNLKRHL
                     ANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSETQTDIEGITRIKYEIPTLDRTGK
                     PDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQGYSKASKIAQNERTKSISERKNV
                     IQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          518 a          343 c          335 g          680 t
ORIGIN      
        1 aaggtataga gttcgctctg tctcgcatag taatattgtt caccgtaaga ttgaattttg
       61 attttgccgt tttccgaact gatatccgtg gtgctgagca ggatgcgact gttctcattg
      121 gcatacggtg cgctaatgct cacaccggtt ttacccgaaa gttctgcagc aagcgtagga
      181 ggtgtcttca gcacgcacgc gtctgggcag tatataggga atctgaatat ttacttgcat
      241 aacaaatgcc gtctgaaaaa attgagcttt tcagacggca ttgagccgta aatcatggaa
      301 cgcgtgcgtg ctggagcaca caccttacgc atggatttta ggtttcatgc aggctacagc
      361 ttgtttgaga atatgttttt tgtatttctt tacacttttt ttgatattca gggtgagcta
      421 ttaagaaatc agatattgca atattaaagt aatgatatgc taaattaata ggtataatta
      481 attcttcagg attgaaatca tctccaactg aaaaataaat agaaggagct ttatcaatat
      541 actcaaatcc atttacctct tcataatctc caatccatct ggtagcatct attttttcat
      601 attgagcacc tattactcca aaatgtccgg tagttgtaat atttttaaaa cactctaaaa
      661 gcgtatcttt agtttcaaat tggtaaattg tttcaaaaaa aatcgaaata acaaaatggt
      721 tgttatttat agatttttta tttaagttta gaaaaatatt atttttcata atttttcctt
      781 taaattattc tgggtgaatg tttgtaattc ttcctgtatt tacatcaaaa tatgatctaa
      841 atttgattcc gtcaaaggtt tctgagaatt gaatgacatt ttttctttcc gatattgatt
      901 tagttctttc attttgagca attttagagg cttttgaata tccttgtgaa gcagcatttt
      961 gagccatttg aagtatttta tcatcagaaa attttttagg attataaaca gtttttatac
     1021 ttgaaatttc cttaaatcca ccatcaggtt tacctgtcct gtctagtgta ggaatctcat
     1081 atttaattcg ggtaatgcct tcaatatcag tttgggtttc agattttacg cgtcctcctc
     1141 gtgaatttag ttctgccata aaattggtgc ggttatgggc tcctttaatg ccctgttttt
     1201 gactaaaacc atcagcattt gccagatgtc tttttaggtt tgtatcgaaa ctgatgcctt
     1261 ccgggtattt gacattagta ataggtgtat tttgttttac aaaccctctt ggtattggaa
     1321 tgaatctagg attaactcct gaaataagtg tataaccttg gtcggacatc cattcggata
     1381 aaggctttgt attgcccgat tgaagccaag atttagcagc agtattcaaa tgataagact
     1441 gtaaagccaa atctgcttgg gtgtaagatt tgctgaataa tttataccat tcatcatctt
     1501 taccaattag acctgcttcc caagatgaat gaaggcttct actatcgatc aaatgttgtt
     1561 ttctgattgt tctacattca gtactacggg atatatccgt acatattgca atcgaagcag
     1621 caagtctttt atcagcaaca ttttgatact tttttacagt attttttctg cacagttgag
     1681 gattattctg tttggcgcat gcagtcattt cgttatcaaa ttctctaccc tctttgtcgc
     1741 taagctgatt atttttcacc gctacctcag ccgcattcgc cgccgcattt acatcgccgc
     1801 cgaccacacc gcttaccgta ccggcaacca gtttgctgta tgccaaaatc tgttcgcgtt
     1861 ctttagctgt caaagt
//
LOCUS       DAWKOX010000226         1843 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.226, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000226 DAWKOX010000000
VERSION     DAWKOX010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.226"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            53..1222
                     /gene="metZ"
                     /locus_tag="WJK78_001944"
     CDS             53..1222
                     /gene="metZ"
                     /locus_tag="WJK78_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ7598816.1"
                     /translation="MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            1317..1523
                     /locus_tag="WJK78_001945"
     CDS             1317..1523
                     /locus_tag="WJK78_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ7598817.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(1622..1734)
                     /locus_tag="WJK78_001946"
                     /pseudo
     CDS             complement(1622..1734)
                     /locus_tag="WJK78_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          445 a          480 c          477 g          441 t
ORIGIN      
        1 aaacaacggg cgcacgctcc gttgccgaac ggataaaacc gaggaatcac cgatgagcaa
       61 aaaactccat ccgcaaacgc tcgccatacg cggcggcaaa gaacaaaccg gataccgcga
      121 acacaatcag gcattgttcc tgaccagcag tttcatgtgg gacaacgccc aacacgctgc
      181 cgatttgttt tcaaaaaaaa tcaaaggctt cacttatacc cgtaccgcca acccgaccac
      241 agccgccttt gaaaaacgca tcgccgcttt ggaaggtgcg gaacgcgcgg tcgccacttc
      301 gaccggcatg tccgcgattc aggcggcgtt tttcaccttt ttgcaggcgg gcgaccatgt
      361 gatttccagc cgcagcctgt tcggcacgac cgtcggcttt atcaataaca tcgttaccaa
      421 attcggcatc gaagtgagtc acgtgtcgcc gactgatata aacgaatgga aagccgccgt
      481 caaagccaac accaaactgc tgtttttgga aacgccgtcc aatcccttgg gagaagtggc
      541 cgacttggaa gccttggcgg aattggcgca cggcatcggc gcgctcttgg tggtggacaa
      601 cagcctgctg tcgcctgtcg gctctcagcc tttgaaacac ggcgcggata tttccgtttc
      661 ctccgcgacc aaagccatag acggacacgg gcgcgtgatg ggcggcgtgt tggcgggttc
      721 ggaagaactg atggcgcagg tcgccgttta ctgcaactct tgcgggctgg caatgtcgcc
      781 gtttaacgca tggcagttgt tgagcggcgt ggaaaccctg tctctgcgta tggaaaaaca
      841 gttcgacaac gccttgaaaa tcgcgcaatg gctgcaagcg cagccgcagg ttcaagccgt
      901 gtattacacc ggattacccg accatcctca ggcggagctt atccgcaaac agcaaaacgg
      961 cggcggcatc gtcatcggct ttgaagtcgc cgaccaagca gccgcgtgga aagtcgtgga
     1021 cggcgtcgaa cttttctccc gtaccgccaa cctcggcgac gtgcgctcga ccattaccca
     1081 tccgtggaca accacgcacg gcaggatgca gcccgaagaa aaactcgccg ccaacatccg
     1141 ccccggattg gtgcgcctgt cggtcggttt ggaatatgtt ggcgatttga ttgacgattt
     1201 gaaacaggca ctcgcgcgct gattgcgtgt tcagacggca tcggcggaaa aacaccgcaa
     1261 atgccgtctg aaacccttat cttatatgac atacacgtca acaataggaa aaaaatatgg
     1321 atgaagcggt ttttgccgat tgggcgttga aaatctgcct gaccggcttg attatttttt
     1381 tgggttttat cgtttggaat ttgggcaagg agtctaaagc gggcaaattc ggcatcgcca
     1441 ttttgttttt ggttttgggc ttgggcgtgt ttggttttgt gttcaaagag ttattgatta
     1501 agtttttggt attgccgaaa taggtttgcg gtctgtcaaa atgccgtctg aaatcataaa
     1561 aagtaatctg caccctaaaa gtttgattta accgccaact gattaaggtg cggattttta
     1621 tgacaaaata tagtggatta acaaaaacca gtacggcgtt gcctcgcctt gccgtactat
     1681 ttgtactgtc tgcggcttcg tcgccttgtc ttgatttaaa tttaatccac tataaaaatc
     1741 atctttccgc agtcattccc acggatgcga aagcctgtct ttttgaatcc cggataattt
     1801 tacatcgtca ttcccgcgca ggtgggaatc cagatcattg ggt
//
LOCUS       DAWKOX010000227         1831 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.227, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000227 DAWKOX010000000
VERSION     DAWKOX010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.227"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(188..844)
                     /locus_tag="WJK78_001947"
     CDS             complement(188..844)
                     /locus_tag="WJK78_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ7598818.1"
                     /translation="MKNKSKVWDLPTRLFHWLLAASLPFMWYSAKAGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIRDYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQIGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFNLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALAAAAILLLS
                     "
     gene            909..1799
                     /locus_tag="WJK78_001948"
     CDS             909..1799
                     /locus_tag="WJK78_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ7598819.1"
                     /translation="MFPVFHLSGESRRRMLQAALRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLTKRQG
                     INAWVVGCGLGTDKAAVGTLAGILTEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIRAIFGATVVLKGHKTLVASPDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
BASE COUNT          411 a          436 c          592 g          392 t
ORIGIN      
        1 aatcggttct gtactatccg tactgtctgc ggcttcgtct ccttgtcctg atttttgtta
       61 atccactata aaacggtttg ggacggaaaa acggcctgaa gccgtttcgg gcattcagac
      121 cgtttgcgcg gagaggggat gccgtccgaa gggcgaaaag ggcttcagac ggcattgatg
      181 tcgggtttca ggacaggagc aggatggcgg ctgcggcaag cgcggcaacc gataatgcgg
      241 cggcaagcgc ggttttaccg gcaaagcgga ttgaggtttt gccttcgatg tatttgaagc
      301 cggttatcat cgggaggacg aggtttttct ttttgaacac gcggtatgcg gcgacggcgg
      361 cgatatgaat ggcggaaaaa acggcgagca ggttgaaaaa gttgaggtgg attttccgca
      421 taaggctgcc tgtatgttcg gaaaccaaat ggttgaggta gccgttggtg ctgaaggtgt
      481 tttcatcggc ggcaaaaagc cccgtgccga tttgaaatga gacggcggcc aaaagcgcga
      541 cgaccatcag tgcgcccaag gggttgtgtc cgggctggat atgttcggga ataccgtttt
      601 tcagataatc cctgataccc gaccatccgc ggacgaaacg ggagaaacgg gcggtatcgc
      661 tgccccaaat gccccagcag aggcggaata cgagcaggaa aaggataaac agcccgacgc
      721 gcgtgtgcca ttgaagcata tcgccgccgg cttttgcgct ataccacata aagggcaagg
      781 acgcggcaag cagccagtgg aaaaggcggg tggggaggtc ccagactttg cttttgtttt
      841 tcataatcgg tttccggcgg tagaatcggt ttgttttcga gccttaattt taaccgattg
      901 gaggggaaat gtttcccgtt ttccatcttt caggcgaaag ccgccgccgg atgcttcagg
      961 cggcattgcg ttttccctat gttttcaaag cccgtgcgga agattcgcac aaagggactt
     1021 tcggcacgct cgccgtagtc ggcggatcgg cagggatgag cggtgcgccc gtattggcgg
     1081 catcggcggc gatgtatctc ggctgcggca aggtgtgggc gggtttcaat caggatgcgc
     1141 ttccgtttgc cgtcattgcc ggtttccccg aaattatgtt ggacacggca gacggtttga
     1201 ccaagcgtca aggcataaac gcctgggttg tcggttgcgg cttgggtacg gataaggcgg
     1261 cggtcggaac gcttgccgga attttgacgg aacacacgga caagcccgtc cttttggatg
     1321 cggacgcgct gaacatatta tcaaccgatg ccgaaacccg aaatctggca cgcgggtgta
     1381 aaaacctgat tttaacgcca caccccgccg aagccgcgcg cctgcttgga acgacggttg
     1441 cacaggttca ggcggatcgg acggcggcag tgaggaagat aagggcaatt ttcggcgcaa
     1501 ccgtggtttt aaaggggcac aaaacattgg ttgcctcacc cgatacggaa atctatgtca
     1561 acgaaagcgg caacgcggga ttggcaacgg cgggcagtgg cgacgtattg ggcggcatca
     1621 tcggcagtct gctcgcacag ggcgtgccgg tttttgaagc cgcctgcgcg ggcgcgtggc
     1681 tgcacggcgc ggcggcggat gtcataaaag aatcggcagg cattgcggca gggctgttgg
     1741 ctggcgaaat cgccccggcg gcaaggtggc tgcgcaaccg gataactgaa agtatgtaag
     1801 aagatatagt ggattaacaa aaaccagtac a
//
LOCUS       DAWKOX010000228         1734 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.228, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000228 DAWKOX010000000
VERSION     DAWKOX010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.228"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            356..1660
                     /locus_tag="WJK78_001949"
     CDS             356..1660
                     /locus_tag="WJK78_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ7598820.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          358 a          432 c          510 g          434 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggattggat gcgatatttc catattcaaa caagggattt gtttcacgca cagggcggca
      241 catcggcaaa atccccgcgc cgccccggtc cggcagggct tgcgtccctc ccggacaagc
      301 cccgaccccg cctttccgaa agacgggctc aaccattaag gaaactttaa tcaaaatgaa
      361 aaaacacata tgggcggcat ctttgctgcc ggcatcccta tcggcagaac ctttaaactg
      421 gtggaagcct tattccgccg tcaattcggg cgataccgcc tgggtgatga ctgcggctgc
      481 cttggtactg ttgatgacgc ttcccgggct ggctttattc tacggcggta tggtgcggaa
      541 aaaaaacctg ctctcgacga tgatgcacag cttttccatc gcgacattgg tgggaatcct
      601 ttgggtcgcc gtcggctatt ctttagcgtt cacgccggga aatgccttta tcggcggttt
      661 ggggcgcgta tttttaagcg ggatgcagat agacgctgcc gcacagatgc tgaccgtgtc
      721 gcccaatgcg ccgactgttc ccgaaccggt atttatgttt tttcagatga cgtttgccat
      781 tatttcgacc gccattatta ccggcgcgtt tgccgaacgg atgaaatatt cggcaatgat
      841 gctgttttcg ggcatatggt ttttattggt ttatgtgccg ggcgcgcatt gggtctgggg
      901 cggcggcttt atgagcaagg gcggcgtatt ggattatgcc ggcggtacgg tggtgcacat
      961 caatgccggt atcgcgggac tcgtcgccgc cttggttttg ggcaggcgca taggctacgg
     1021 gcgcgaggcg atgcctccgc acaatatggc gatgacactg atcggcgcgg caatgttgtg
     1081 gttcggctgg ttcggcttta acgccggatc ggcgcttgcg gcagacgcgg cggcgggtat
     1141 ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg gcaggctggc ttgcctgcga
     1201 aaaaatagcg ggacacaaac cttccgcttt ggggctggct tccggcgcgg tttccggtct
     1261 ggtcggcatc acccctgccg ccggctttac cggcccgtct ggagcggccg ccatcggtat
     1321 attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc aaacacaaat tgcgttacga
     1381 tgattctttg gacgctttcg gcatacacgg attcggcggg ctggtgggcg gaatattgac
     1441 cggcatcttt ttcgacaacc gcattttcgg cggggatgcg gcagtttggc agcagttgtg
     1501 gatacaggta aaagacgggt tcgttatggc ggcatacagc gggctgatga gttgggcgat
     1561 tttgaaggtc gtggggaaaa tctgcggcgg cctgcgcgtc ggcaaggatg tcgaacgcga
     1621 aggtttggat ctgaatatcc acggagaacg cgtggaataa gggcggctat gccgtctgaa
     1681 gcctgaaaat cgggtttcag acggcatttt tcacgtttgc cgccgatgga taaa
//
LOCUS       DAWKOX010000229         1732 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.229, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000229 DAWKOX010000000
VERSION     DAWKOX010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.229"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            170..1144
                     /locus_tag="WJK78_001950"
     CDS             170..1144
                     /locus_tag="WJK78_001950"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ7598821.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALCGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPAKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(1303..1521)
                     /locus_tag="WJK78_001951"
     CDS             complement(1303..1521)
                     /locus_tag="WJK78_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ7598822.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT          475 a          483 c          372 g          402 t
ORIGIN      
        1 ccactataag aataaatatc ccctcatccg cctgccgcgt tccgacttgc cccgcgccgt
       61 ttttttccac tacaatccca cgcgatatct ggcggaacgc accaaaggaa cgccccgcag
      121 caatctgccg cctttcagac ggcacaaaca tttccgaaac gagcaaacta tggacacact
      181 gacccgattc ctccccgaac acctgcaaca aaaccagctg cccgaagcac tctgcggcgt
      241 tttactgtcc gttgtttccg cctgcaccga aatcaacgcc aaagtccgcc tcggcgcact
      301 ggccggcgta ttgggtatgg cgggcacggg caatattcag ggcgaagacc aaaaaaaact
      361 ggatgttatc gccaacaaca tcatgattga cacactcaaa gccaaccctg ccgttgccgg
      421 tttggcaagc gaggaagaag actctttcgt aagtgccggt gaaaacggac gctatctcgt
      481 cctattcgat cctttagacg gatcgtccaa tattgatgtc aacatttccg tcggtacgat
      541 tttctccatc cttgaaaaac ccgaaggcgc attggcaacc gaatcattcc ttcaaacggg
      601 cagacagcag cttgccgctg gttacgttct ttacgggcct caaacccagc tcgtattcac
      661 attcggacac ggcgtatata tgttcacgct caatgccgaa aacgaatttg tgctgacaaa
      721 agaaaaaccg aaagtacccg aaagtaccaa agaatttgcc atcaatatgt ccaaccgccg
      781 ccactggctg ccccccgtcc aacaatacat cgacgagctc ttggcgggcg aaaccggcac
      841 gcgcggcaaa aactacaata tgcgctgggt agccagcatg gttgccgaaa tccaccgcat
      901 cctgatgcgc ggcggcgtgt tcatgtatcc gcaagacaaa cgcgaccccg ccaagcccgg
      961 caaactgcgc ctgatgtacg aagccaaccc tatgagcctg atactcgaac aggcgggcgc
     1021 atcggcaagc aacgcatatc aagccatgct cgacatacag cccgaaaacc tgcaccaacg
     1081 cgtcgccgtc attatgggca gcagcgaaga agtggattac ctcaaccgcc tgcattcaaa
     1141 ataaaaggca gcctgaccga taaagaaagg cggcagcgcg catccgacgc tgccgccgat
     1201 atttcgttta tagccttaaa aagatagaaa accacctttc cgaacggcaa aaatgccgtc
     1261 tgaaaagttt tcagacggca ttttaaaaat taaagcccga atttatttgc ccgctgcttt
     1321 ttgcaggatg gcgtacaact cgtctttcag tttcaatttg gcttttttca gctcatcgat
     1381 ggtttccgca ccgctggtaa ccggattgtt gaccagaccg gtaattttat cgtccagctc
     1441 gttgtgttcg tcgaacagac gggcgaagcg ggaattttcc tgtttcaatt tggaaatcaa
     1501 atcacggtat tctgggaaca tatcgctttc ctctcttggt ttacggttaa aaagtcaaat
     1561 tgaatcttta cattaattat aacaaagata atatttttat ccagtgtttt atcggatacg
     1621 gcaaaatttt cttttaacac cgccgtccgg ttgataaaaa cgttgacaat atcacgcttt
     1681 acgcataaat tttcagcctt tcctactgta tagtggatta acaaaaatca gg
//
LOCUS       DAWKOX010000230         1725 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.230, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000230 DAWKOX010000000
VERSION     DAWKOX010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1725
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.230"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(42..365)
                     /locus_tag="WJK78_001952"
     CDS             complement(42..365)
                     /locus_tag="WJK78_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ7598823.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IIPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(353..592)
                     /locus_tag="WJK78_001953"
     CDS             complement(353..592)
                     /locus_tag="WJK78_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ7598824.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(715..1512)
                     /gene="truA"
                     /locus_tag="WJK78_001954"
     CDS             complement(715..1512)
                     /gene="truA"
                     /locus_tag="WJK78_001954"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ7598825.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALENALAQI
                     AGESVATTVAGRTDTGVHATAQVVHFDTVAVRPQQAWVRGVNAHLPEGIAVLHAQQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIGPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          389 a          409 c          493 g          434 t
ORIGIN      
        1 ttaatccact ataatgaaca caatccattc agactattca atcaggcaaa catctcctgc
       61 aatactgcaa acagtttttc agccgtactg ttgtctaaat ttccaagatg tttgaccaat
      121 ccggctttat ccacagccct aatctgttcg ggcaaaagca aaccgtcttt atcctgaaag
      181 cggacattga cgcggaacgg ggcaggacgg cttccgctcg tcatgggaat gatcagcaca
      241 gtcttgagat agttgtgtat ttcaggagga gagactacga cacaaggacg tgtctttttg
      301 atttcgcttc ctacggtcgg gtctaaggag accagataga ttccgccgcg tactaccata
      361 tccattcttt atccgcttcg ttttcaattt cggaaaaaaa atgctcctgc tcggtttcga
      421 caagcattgc ggcagcttct gcccatcccc tgcgaacggt aggacagctt aaaatgatat
      481 tgcccttttc aactgtaaca gccaagctgt ctactgcccc tatttgaccc aataatgatt
      541 tgggcagaat cacgccttgc gagtttccca ttttgcgtat gttgagaatc atatacgtac
      601 cctatttacc agtttatgta ataacaatgt tattaccttg atgaggtagt gtcaacattg
      661 aaaaagattg cctgacagtt tgtccgattt caaaatctcc gcgacaagaa tgttttaaag
      721 ccattcgggg atttgggggc ggatgatgcc gtatgcctcg ggatagtcga cgccggtcag
      781 gtaaagcccg tcgggcataa aggtcggtgg ggctttgagg cggctgcgtt cttgaatgag
      841 ggcggcgaag ccttcgacgc tgagcctgcc gctgccgaca tagacgagcg cgcccataat
      901 gttgcgtacc atatggtgca aaaaggcgtt gccgtgcaaa tcgaggcgga cgagtcctgc
      961 gctttgggta agatcggcgc ggtagatggt tttgacgggg gattttgctt ggcactcggc
     1021 ggcgcggaag ctggagaagt cttgttcgcc aatcaaatag gcggcagccc ggcgcatcgg
     1081 cccgatgtcg agtttgaggt gtgtccagcc tgccctgttt ttgagcagtg gggaacggac
     1141 gggggcggat tcgagcaggt agcggtagtg ccgtccgtat gcgtcaaatc gtgcatgaaa
     1201 ttcgggggcg acctgttggg cgtgcaaaac ggcaatgcct tcgggcaggt gggcatttac
     1261 gccgcgcacc catgcctgtt ggggacggac ggcaacagta tcaaaatgaa cgacttgggc
     1321 ggtggcgtgc acgccggtat cggttctgcc ggcaacggtg gtggcgacag attctcctgc
     1381 tatttgggca agtgcgtttt ccaatgccgc ctgaacggtc ggtacgccgt cagcctgttt
     1441 ctgccagccg taaaagcggc tgccgtcata ggatagggtt attgcccagc gttgtttttg
     1501 tgcggtatcc atcggatttg ggattcggat aaatgttcag actgcattgt atcgcagatt
     1561 ttgcagggaa acggcaaacg cccggggcga gcggcgttgt ttggggagtt gggggggtgg
     1621 atgcagttgc tacgaatcgc tatcctgtga attcaccctg tcaggagtgc ccgaatcgtc
     1681 attcccgcgc aggcgggaat ctaggacgta aaatctaaag aaacc
//
LOCUS       DAWKOX010000231         1663 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.231, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000231 DAWKOX010000000
VERSION     DAWKOX010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1663
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.231"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            309..1469
                     /locus_tag="WJK78_001955"
     CDS             309..1469
                     /locus_tag="WJK78_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ7598826.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQLQLTEPL
                     QNIQQPQVTKRKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGGATRW
                     GNRESFVGLAGEFGTLRAGRVANQFDDASKAIDPWDSNNVVASQLGIFKRHDDMPVSV
                     RYDSPEFSGFSGSVQFVPAQNSKSAYTPAHFVQQTPQSQPTLVPAVVGKPGSDVYYAG
                     LNYKNGGFAGNYAFKYAKHANVGRDAFELFLLGSGSDEAKGTDPLKNHQVHRLTGGYE
                     EGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERGKKG
                     ENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          414 a          396 c          427 g          426 t
ORIGIN      
        1 atccactata aagtgccgtg tgtgtttttt atggcgtttt aaaaagccgg gactgcatcc
       61 gggcagcagc gcatcggccc gcacgaggtc tgcgcttgaa ttgtgttgta gaaacacaac
      121 gttttttgaa aaataagcta ttgttttata tcaaaatata atcattttta aaataaaggt
      181 tgcggcattt atcagatatt tgttctgaaa aatggttttt tgcggggggg ggggggtata
      241 attgatgaca tatcgggtgt ttgcccgatg tttttaggtt tttatcaaat ttacaaaagg
      301 aagccgatat gcgaaaaaaa cttaccgcgc tcgtattgtc cgcactgccg cttgcggccg
      361 ttgccgatgt tagcctgtac ggcgaaatca aagccggcgt ggaaggcagg aacatccagc
      421 tgcagttgac cgaaccgctc caaaatattc aacaacctca ggttactaag cgcaaaagcc
      481 gcatcaggac gaaaatcagc gatttcggct cgtttatcgg ctttaagggg agcgaggatt
      541 tgggcgaagg gctgaaggct gtttggcagc ttgagcaaga cgtatccgtt gccggcggcg
      601 gcgcgacccg ttggggcaac agggaatcct ttgtcggctt ggcaggtgaa ttcggcacgc
      661 tgcgcgccgg ccgcgttgcg aatcagtttg acgatgccag caaagccatt gatccttggg
      721 acagcaataa tgttgtggct tcgcaattgg gtattttcaa acgccacgac gatatgccgg
      781 tttccgtacg ctacgattcc cccgaatttt ccggtttcag cggcagcgtc caattcgttc
      841 cggctcaaaa cagcaagtcc gcctatacgc cggctcattt tgttcagcag actcctcaaa
      901 gtcagcctac tctcgttccg gctgttgtcg gcaagccggg gtcggatgtg tattatgccg
      961 gtctgaatta caaaaatggc ggttttgccg ggaactatgc ctttaaatac gcgaaacacg
     1021 ccaatgtggg ccgtgatgct tttgagttgt tcttgctcgg cagcgggagt gatgaagcca
     1081 aaggtaccga tcccttgaaa aaccatcagg tacaccgcct gacgggcggc tatgaggaag
     1141 gcggcttgaa tctcgccttg gcggctcagt tggatttgtc tgaaaatgcc gacaaaacca
     1201 aaaacagtac gaccgaaatt gccgcgactg cttcctaccg cttcggtaat gcagttccac
     1261 gcatcagcta tgcccatggt ttcgacttta tcgaacgcgg taaaaaaggc gaaaatacca
     1321 gctacgatca aatcatcgcc ggcgttgatt atgatttttc caaacgcact tccgccatcg
     1381 tgtctggcgc ttggctgaaa cgcaataccg gcatcggcaa ctacactcaa attaatgccg
     1441 cctccgtcgg tttgcgccac aaattctaaa tatcggggcg gtgaagcgga tagctttgtt
     1501 tttgacggct cgccttcatt ctttgattgc aatctgactg ccaatctgct tcagccccaa
     1561 acaaaaatcc ggatacggaa gaaaaacggc aataaagaca gcaaataccg tctgaaagat
     1621 tttcagacgg tatttcgcat tttcggcttg gtttgcacat ata
//
LOCUS       DAWKOX010000232         1643 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.232, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000232 DAWKOX010000000
VERSION     DAWKOX010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1643
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.232"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(830..1581)
                     /locus_tag="WJK78_001956"
     CDS             complement(join(830..1362,1362..1581))
                     /locus_tag="WJK78_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242698.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ7598827.1"
                     /translation="MARTAITDNIWEQLQTTMKAHGCHQWKNDRTVMEAILWKLRTGA
                     PWRDIPIELGSWKTAYNRFNRWSKKGLWQKFFFDLRKEIDKEWVFIDGSYVRCHQHAS
                     GARRGFDRAIGQSRGGNTTKIHLCVDSHGNPLDFKVTGGNVHDGQVANDLIEVIQEAQ
                     YFIADKGYDSQEIRDKAIEHGMKAIIPKRKNAKKPNPDFDSYLYKLRHLVENAFARLK
                     QFRSIATRYEKLARNFKSMLYLACSIIHAKLN"
BASE COUNT          402 a          395 c          366 g          480 t
ORIGIN      
        1 tgttaatcca ctataggttt ccgtgcggac gtgttcagat tcccgccttc gctggaataa
       61 cggcggagca gtttctgctt ttccgataaa tgaccgtaac ttaaaatccc gtcatcccca
      121 cgaaagcaaa aatcctgcct gtcggatttc ggtttttttg ggcgtttcgg gaaacttata
      181 aatcgtcatt cccgcgcagg cgggaatccg gtttgctcgg tttcggtttt tcgggcgttt
      241 cgggaaactg atgaatcgtc attcccgcgc aggcgggaat ctagaacgcg ggacggcggc
      301 aatattcaaa ggttgtctga aaattcagag gttctagatt cccactttcg tgggaatgac
      361 gggatatagg tttccctacg gacgtgttca gattcccgct ttcgcgggaa tgacggcgga
      421 gcgatttctg cttttccgat aaatgaccgc aacctaaaac ccatccttcc cgcaaaaaca
      481 gaaaaacaaa aacctaaaat cccgtcatcc ccacgataac agttgcgtaa ttgcgtagag
      541 tgggcttcag cccaacgttt tttctttttc ggtcgttgat tggtgggctg aagcccaccc
      601 ttgtatatcg gaactcccgt atcatagcaa caaaccgccc ggccgccacc cgcgcccacc
      661 caaggcacac aaccgttgcg tagcacaggg agcggcaggg caacccatcg acacaaccgg
      721 acagttgccg gacaacacaa ccgaatgcaa ggcaggttga tgatgagtac ccgataccat
      781 tacgcaggta tagtgaatta aatctaaggg gctgtactag ggcgtgtcct caatttaact
      841 tagcatgaat aatagagcaa gccaagtaaa gcatcgattt aaaattacga gctaatttct
      901 catagcgagt agcaatacta cgaaactgct ttaatcgtgc aaatgcattc tcgactaagt
      961 ggcgtaattt ataaaggtag ctatcaaaat cagggttagg tttcttggca tttttacgct
     1021 ttggtataat agctttcata ccgtgttcta tcgctttatc tctgatttct tgcgagtcat
     1081 accctttgtc agcgataaaa tactgggctt cttgtatgac ttctatcaag tcgtttgcaa
     1141 cttgaccgtc gtgcacgtta cccccagtga ctttaaaatc gagcggattt ccatgcgagt
     1201 ccacacatag gtgtattttt gtcgtgtttc cgccacggct ttgtccaatt gctctatcga
     1261 aaccacgccg agctccactt gcatgttgat gacaccgtac ataacttccg tcgatgaata
     1321 cccattcttt gtcaatttct tttcgtagat caaaaaaaaa ttctgccaca agcctttttt
     1381 agaccatcgg ttaaagcggt tataagcggt tttccatgac cctagctcaa taggtatgtc
     1441 tcgccatggt gcacctgttc ttagcttcca tagtatggct tccatcacgg tacggtcgtt
     1501 cttccattga tgacagccgt gcgctttcat ggttgtttgt aattgttccc atatgttgtc
     1561 agttattgcg gttctcgcca ttgtttgtgt ttgcctatat ttcgttggaa tatagggtta
     1621 aaatagggct cttttgggct tat
//
LOCUS       DAWKOX010000233         1624 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.233, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000233 DAWKOX010000000
VERSION     DAWKOX010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.233"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(20..682)
                     /locus_tag="WJK78_001957"
     CDS             complement(20..682)
                     /locus_tag="WJK78_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ7598828.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLIKLGAGITPDHPDYARWRTEYLDEYDSRYAQDTTLFGGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLAPKLGFIIPPAVVVSGDTCGEPKPSVKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(695..1522)
                     /locus_tag="WJK78_001958"
     CDS             complement(695..1522)
                     /locus_tag="WJK78_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ7598829.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTTEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNRWYQHLCRE
                     RGLEPIALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT          302 a          435 c          506 g          381 t
ORIGIN      
        1 tttgtggggc ggatattttt cagggctgta ttttgtccag acattcgagc agatcgagtg
       61 gcgtgcggat gtggaaatcc gcctgccatg agccggtatc gtcttcggga gcgatgtagc
      121 cccattcggc gaggacggtt ttcatgccgg cgttgcggcc tgcttggatg tcgcgttcgg
      181 catcaccgac gtagagtgtg tgttgcgggt cggcgtggat ttgtccgcac gcatacagca
      241 tgggtttgac gctgggcttg ggttcgccgc aggtgtcgcc gctgacgacg acggcgggtg
      301 ggatgatgaa gccgagtttg ggggcgagtt tgtcggtgaa gcgcatgggt ttgttggtga
      361 tgatgcccca tttgatgccg cgtctgtcga gttcggcgat gagttcgttc acgccgccga
      421 agagggtggt gtcttgggcg tagcggctgt cgtattcgtc aaggtattcg gtgcgccatc
      481 gggcatagtc ggggtggtcg ggggtgatgc ctgcgccgag tttgatcagt cctgccgcgc
      541 cgtggctggc ttgggtgcgg atctcgtcca tgctttttgc aggtagtccg tggcgagcga
      601 gcagggtgtt gagtgcgcct ccgaggtcga gggcggtgtc ggcaagtgtg ccgtcgaggt
      661 cgaagagtac ggcgtgtatc atgtgtgttc cttttcagac ggtatttttg ttctgtttca
      721 aaccctgctc gaaatcttcc agcatatcca attcaaagcg gctgaagccg gctttttcgc
      781 gcgcttcgat gttcacatag ccacggaaga taaacatatc gtaacgggca atcagactgc
      841 ggaacagggc aatcggttcc aaaccgcgtt cgcggcagag gtgttgatac caccggttgc
      901 cgatggcgac atggcccact tcgtcgcggt aaatgatgtc caatacgccg caggtttccg
      961 aatcgccgcg ctgcgccacc ttcgcgcgta tccccggcgt aacgtccagc ccgcgcgctt
     1021 ccaacacgcg cggtaccaac gccatacgca acagcgggtc gtaggcggtt ttgtacgcca
     1081 tatcccacaa atggttgtgc gcctcgaaac tgccgtaatc gaagccgaaa gcgcgcaatc
     1141 tgtcgcgcat caggcggaaa tggtacacct cttccttcgc cactttcacc cagtcgcgga
     1201 caaactgaaa cggcagcgtg cggaaacggt atgccgcgtc caaagctaga ttgacggcgt
     1261 tgaattcgat atgcgcaatc gcgtgcagca tcgccgcata accttcggtt gtgttcattt
     1321 tgcgcggggt cagttgcgac ggcgcgacca aaacaggctt gtccggccgt cccgctcggg
     1381 ggaagtccgc cggcggcgcg tttgcttccg ccccgtccgc attttgaacg gcggcaaacg
     1441 cctcatccgt cagccgtcct ttttcatctg ggtcgcccga aagcagggcg cgttccagca
     1501 aagcataaat atcgagtttc atctcaagtc cgccgtgttc ggaaaacaaa tattatagcg
     1561 ttttaaaaaa acaagatgag gcatataatc tccgcgattc ggcattccgc gcccaaaccg
     1621 tcaa
//
LOCUS       DAWKOX010000234         1618 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.234, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000234 DAWKOX010000000
VERSION     DAWKOX010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.234"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..380)
                     /locus_tag="WJK78_001959"
     CDS             complement(<1..380)
                     /locus_tag="WJK78_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598830.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMY"
     gene            complement(438..803)
                     /locus_tag="WJK78_001960"
     CDS             complement(438..803)
                     /locus_tag="WJK78_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598831.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(785..1330)
                     /locus_tag="WJK78_001961"
     CDS             complement(785..1330)
                     /locus_tag="WJK78_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598832.1"
                     /translation="MKKQITAAVMMLSMIAPAMANSMDNQIFENQVFHTRADAPMQLA
                     ELSQKEMKETERAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
BASE COUNT          506 a          356 c          247 g          509 t
ORIGIN      
        1 ctatacatct caatacgata aatatttctt aagtcaaaat gcaagcctga ccgtacctta
       61 actgtcaaaa ttttattatt ttttattgat tttaaaacaa tttctgcaaa attctcttcg
      121 ctttctctct tttttagaag cacataagaa aaaataaaac ttccccgatt aaattcataa
      181 atatgtttca accatttgcc tcctctttct gtaagacaag attcagtttc attcttcctt
      241 attgtataaa tatttccttc acaaaatctg aaataaatcc ataaatccat cttatccata
      301 attaaagaaa aagtttcacc tcgagatttt gtcaacaatt cgcaaggttg cgatgttgca
      361 atcaaatagc cgaaagacat tttttacctc atacatggtc gaaatcagtt tctgttagtt
      421 cagaatccat tttttcgtca acaactgaat ccgcattttt gaattaacgt tttcatcagc
      481 tgccgtttat ctaaaccggc aggttcagtt tcaaaataag ccttatatga agactgtaag
      541 catttcagaa aaagatcatc agaagacata tctgccgaat caaatacaac tgttttgatt
      601 ttggtactta cccaaaaccc tttttgctct ttttctacta tacggaaatt cagaatattt
      661 ccaaccgaat caaaagcacg gtaaacatca tccatcaaat cctgcggctc tattttcttt
      721 tccaattccg acaatccttg aaatatatcc aaagacacat cttcaaatag aaaaaaagga
      781 ggagttagaa gcggtttttc catgatctgt ccgtagattt tgattcccaa gggcgatgac
      841 gaccaattcc ctgtccaggc aaagtcttgc ccgtattatc cgtaactcga cgatgataat
      901 ggggaaattt tccaatagga tgacctgttc tattaccgaa aggggctatc cgcatattat
      961 tgccgatttt aatctcacgt ccatatttag caaaggaaac aacctttcct gcggcgccta
     1021 caccaccagg aattgcgcct aatccgccag caatagcaac atctctaaca gaagctggtc
     1081 tgcctgtcgt tgcataacta aaaccatgct gtgtccacat accaatggca gcaccaccca
     1141 agatagccaa tggaagaaac gccctctcag tctccttcat ctccttttga gaaagttccg
     1201 ccaactgcat cggcgcatct gcccgcgtat ggaatacttg gttttcaaat atctgattgt
     1261 ccatgctgtt tgccattgcg ggggcaatca tagacagcat cattacggct gcggtaattt
     1321 gttttttcat aataactcct ttggattaca aggttggaaa atcaaagccc tgcttagaac
     1381 gtatgttgca cacccaattt caataggtaa atcagattgc aaatccagca atttgaatat
     1441 tgtcattgtt ccgtgcaaaa gggattttta ttgatgagtt gtgtactggg tttcagcttg
     1501 gctttttaga taatcttttc acaagaacat acatcaatac tgtccaaaaa aaaagatttg
     1561 ataaatatat tgcaacatat tttattccac ctccatccga aacagaaacc aatatatt
//
LOCUS       DAWKOX010000235         1592 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.235, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000235 DAWKOX010000000
VERSION     DAWKOX010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.235"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            59..1432
                     /locus_tag="WJK78_001962"
     CDS             59..1432
                     /locus_tag="WJK78_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ7598833.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNIHLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLHRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKLNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESAKAQREKNTRPENAANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
BASE COUNT          416 a          520 c          386 g          270 t
ORIGIN      
        1 cccgtcctat cggtttcccg tttcagacga cataaggtct gaaagaaaga ctacaattat
       61 gagtaatcca ttttcctctt taggtttggg tacggaactc gtttccgcac tgaccgcgca
      121 aggttacgaa aacccgacgc ccatccaagc cgccgccatt cccaaagcac tcgccggtca
      181 tgatttgcta gccgccgcgc aaaccggcac aggcaaaacc gccgccttta tgctgcccag
      241 tctggaacgc ctcaaacgtt acgccaccgc cagcacctcg cccgcgatgc accccgtgcg
      301 tatgctcgtc ctcaccccca cgcgcgaact tgccgaccaa atcgaccaaa acgtgcaggg
      361 ctacatcaaa aacctgccgc tgcgccacac cgtcttgttc ggcggtatga atatggacaa
      421 acagaccgcc gatttgcgcg ccggctgcga aatcgtcgtc gccaccgtcg ggcggctgct
      481 cgaccacgtc aaacaaaaaa acatccattt gaacaaagta gaaattgtcg ttttggatga
      541 agccgaccgt atgctggata tgggttttat cgacgacatc cgcaaaatca tgcagatgct
      601 gcaccgccaa cgccaaaccc tgctcttttc cgccaccttc tccgccccga tacgcaaact
      661 ggcgcaagac ttcatgaacg cgcccgaaac cgtcgaagtc gccgcgcaaa acaccaccaa
      721 cgccaacgtc gaacaacaca tcatcgccgt cgataccttc caaaagctca acctgctcga
      781 acggctgatt gtcgatctgc atatgaacca ggtcatcgtg ttctgcaaaa ccaaacaaag
      841 cgtcgaccgc gtaacgcgcg aactggtgcg ccgcaacctg tccgcacagg cgatacacgg
      901 cgaccgttcc caacaaagcc ggctcgaaac actcaacgcc ttcaaagacg gcagcctgcg
      961 cgtcctcgtc gccaccgaca tcgccgcgcg cgggctggac attgccgaac tgcccttcgt
     1021 catcaattac gaaatgcccg cccagcccga agactacgtc caccgcatcg ggcgcacggg
     1081 gcgcgcgggc gcggacggcg tggcgatttc cctgatggac gaatccgaac agaaaatgtt
     1141 tgaatccatt aaagagctga ccggcaacaa gctgctcatc gagcgcatcg agggcttcga
     1201 gccgcaatgg tgggaacagg gcggcgcaaa accggaaaaa accgaaatgc gcgaaccgag
     1261 acaacgcaac cgctacgaat ccgccaaagc gcaacgcgaa aaaaacaccc ggccggaaaa
     1321 tgcggcaaac gatgcgggcg cggcttgcgg aaaaattgcc ggacgcagcc gccgaagccg
     1381 ccgggaacac cggacgtgcg ccctgctcca accgcgttac ggcgtaaaat agccctgaaa
     1441 atcaaatgcc gtctgaacat ttcccgtttc agacggcatt tttcaaaccg gactgacgca
     1501 tcgggagcaa ccgcccgcac cggataaatt tctgccgcaa acagtttcag acggcatttg
     1561 ctgcctgtac aatatagtgg attaacaaaa at
//
LOCUS       DAWKOX010000236         1579 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.236, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000236 DAWKOX010000000
VERSION     DAWKOX010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.236"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(369..1292)
                     /locus_tag="WJK78_001963"
     CDS             complement(369..1292)
                     /locus_tag="WJK78_001963"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ7598834.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFHRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
BASE COUNT          421 a          366 c          403 g          389 t
ORIGIN      
        1 agaccttaga ataacagcaa tattcaaaga ttatctgaaa gtccgagatt ctagattccc
       61 actttcgtgg gaatgacggg atgtaggttc gcgggaatga cgggatttga gattgcggca
      121 tttatcggaa aaaacagaaa ccgctccgcc gtcattcccg cgcaggcggg aatctaggtc
      181 tgtcggtacg gaaacttatc gggaaagcgg tttctttaga ttttgcgttc tggattccca
      241 ctttcgtggg aatgacggga tgtaggttcg cgggaatgac gaattttagg tttctgtttt
      301 ggttttttgt ccttgtagga atgatgaaat tttaagtttt aggaatttac cggaaaaaat
      361 agaaagcgtt atccacaagt tctgatgttc agctcgtgaa atgcgtcggg caaatcatcg
      421 ctgtcggcaa attccacccg gtcgtaagcc gtttcgtctg ccaaaaccgc gcgcaagagt
      481 gcgttgttga tggcgtgtcc cgatttgtag ccttcaaacg cgccgacaat cggatgtccg
      541 acgatataca aatcaccgat ggcatcaagg attttgtggc gcacaaactc atcgggatag
      601 cgcaagcctt caggattcag gacatccgtg tcgtcaatca cgatagcgtt gttcaaattg
      661 ccgcccaaac ccagattgtg ggcgcgcatc atttccactt cgtgcataaa gccgaaagtg
      721 cgcgcgcgcg cgatttcgtc gatgtaggat ttgccggcga aatcaatttc aaaagtgggc
      781 gagctgcggt tgaaaaccgg atggtcgaat tcgatggtca gcgttacctt aaagccgtca
      841 tacggcgtaa agcgcaccca tttgcccgct tctttgattt cgacaggctt gaggattttc
      901 aaaaaacgct tttgcgcctt ttgatcgacc acgcccgcat cttgcaaaag gtaaataaac
      961 ggcaggctgg agccgtccat aatcgggatt tcgggcgcgt tcagctcaat cagcgcgttg
     1021 tcgataccgt aggcggacag cgcggacata atgtgttcga tcgtgccgac gcgcacgcct
     1081 ttgtcggtaa cgatggtgga ggaaaggcgg gtatcgttga tcaaataagg ggtcagcttg
     1141 atttgttcgc ccatctcgcc gtccaaatcg gtacggtgga aggaaatccc gctgttttca
     1201 ggcgcggggt gcagggtcag cgcgacgcgt tcgcccgaat gcagcccgac tccggtaacg
     1261 ctgatggatt tcgccaaagt tctttgcagc ataaaccgct tccttatcaa tggggtaagt
     1321 tttggaataa tacgataaaa ccggaaaaac aagctatgtt tttccatagt atttgccaat
     1381 gtatccgttt tcaatacgta agccgcataa aaatgtatag tggattaaca aaaatcaaga
     1441 caaggcgacg aagccgcccc cctcctgaaa aacgcaaaaa atgccgtccg aaaacctttc
     1501 ggacggcatt ttcgcgtaaa ccgtcattcc cacaaggaca taaaaccaaa acagaaaacc
     1561 aaaaacagaa acctaaaat
//
LOCUS       DAWKOX010000237         1546 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.237, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000237 DAWKOX010000000
VERSION     DAWKOX010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1546
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.237"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            19..561
                     /locus_tag="WJK78_001964"
     CDS             19..561
                     /locus_tag="WJK78_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ7598835.1"
                     /translation="MLHLKDKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFS
                     KTPEAIFRCNLHTELKKKRKLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVV
                     LDVKQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWN
                     HVPPDLMEHIDGLKTKCPKP"
     gene            732..1427
                     /locus_tag="WJK78_001965"
     CDS             732..1427
                     /locus_tag="WJK78_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ7598836.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPVE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
BASE COUNT          494 a          323 c          335 g          394 t
ORIGIN      
        1 ttggctttcc gatattcgat gctgcatctg aaagataaaa tcaacggcac agatcaaatg
       61 gatgatttat atagaatttt cttttacgac tgcgtgccgt ttgaaaagaa aatgcacaat
      121 cccgtatctc atcgtgccat agatttttca aagactccgg aagccatatt tcgttgcaat
      181 ctgcataccg aattgaagaa gaagcgtaaa ttagcgttac gtttaggcaa gctgtcggac
      241 aatacagcat ggatattaaa accccaagtc atgaaaaatc ttctgaaaaa cccgtcaact
      301 caaattacgg aaaacgatgt cgtgctcgat gttaaacaaa aaggtgtaga tatgcgtata
      361 ggcttggata tttcatctat taccttaaaa aaacaagccg ataaaatcat cttgttttct
      421 ggtgattccg attttgtccc agcagccaaa ttagccagac gggaaggtat cgattttatt
      481 cttgatccta tgtggaatca tgtcccacct gacttaatgg aacacatcga cggattgaag
      541 acaaaatgtc cgaaaccgta aattactaga acaaaggccg tctgaaaata aggctaatta
      601 tctaagccat atttcagacg gcctttataa aggctgaaat aaaactaaac acattttttc
      661 actcaaatcg aacacgcctt caataaaatg ccataaaatc cgcacattaa tctgacacac
      721 aagagatacc tatgaaactg aaaaccttag ctttgacttc attgaccctg ttggcattgg
      781 ccgcttgtag caaacaggct gaaaccagcg ttccggcaga cagcgtccaa agcagctcat
      841 ctgctccggc agcccctgtt gagttgaacg aaggtgtgaa ctacactgta ttgtctacgc
      901 ctattccgca acagcaggcc ggtaaaatcg aagtattgga atttttcggc tacttctgcc
      961 cgcattgcgc ccatcttgag ccggtcttga gcgagcacat caaaacgttt aaagacgata
     1021 cctatatgcg ccgggagcat gtcgtgtggg gtgatgaaat gaaacctttg gcacgtttgg
     1081 cggccgcagt ggaaatggcc ggtgaatcag ataaagccaa cagccatatt ttcgatgcga
     1141 tggttaatca aaaaatcaat ctggccgata ccgataccct gaaaaaatgg ctgtccgagc
     1201 aaacagcgtt tgacggcaaa aaagtattgg ctgcatttga ggctcctgaa agccaagcgc
     1261 gtgcggctca aatggaagag ttgaccaata aattccaaat cagcggcaca ccgactgtga
     1321 ttgtcggcgg caaataccaa gttgaattta aagactggca gtccggtatg accacgattg
     1381 accagttggt ggataaagta cgcgaagagc agaaaaagcc gcaataagtt gaggattgaa
     1441 tgagtaaagg ccatctgaaa ataggatttc agacggcctt ttgtatttag gctttataga
     1501 agagatgatt gcttaaagcc ttatggtttt aaatcagaat atatag
//
LOCUS       DAWKOX010000238         1497 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.238, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000238 DAWKOX010000000
VERSION     DAWKOX010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.238"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(138..1127)
                     /gene="porB"
                     /locus_tag="WJK78_001966"
     CDS             complement(138..1127)
                     /gene="porB"
                     /locus_tag="WJK78_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HEZ7598837.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSVAHNGAQA
                     ASVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFMQYGGAYKRHQNVDNVKIEKYQIHRLVSG
                     YDNDALYASVAVQQQDAKLVKDNSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFDD
                     ADYTNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGESKFVSTAGGVGLRHKF"
BASE COUNT          374 a          335 c          383 g          405 t
ORIGIN      
        1 atattttgac attgaataaa aaagactaaa aacaggaaaa agccaaacag aaaacagcga
       61 aacagaaaac aggaaaaagc caaacagaaa aaagcctgtc tggcgacagg ctttttgttg
      121 ataccaatct ttgcagatta gaatttgtgg cgcagaccga caccgccggc agtcgatacg
      181 aatttgcttt cgcctttgcc ttcttgcaac caaccggcag aaaccaaggc agaagtgcgt
      241 ttggagaagt cgtattccgc accgacaacc acttggtcgt aatcgttggt gtagtctgca
      301 tcatcaaacg agcctttgaa gccgtgggcg taagaaacgc ggggcgttac gttgccgaag
      361 cggtatgcca aggtagcggc aacttcggtt tgagagttgt gcgaattgtc tttaaccagt
      421 ttcgcgtctt gttgctgtac ggctacggaa gcgtacaggg catcattgtc gtaaccgctg
      481 accaaacggt gaatctggta tttctcaatc ttcacgttat ccacattctg atgtctttta
      541 taggcaccgc catattgcat gaagaagccg ccgtttttgt agttgaagcc ggcgtggtaa
      601 gattcgctgt tatgtctgcc tgcattgtcg ttaagcgcgt attgtacgct gccgctgagg
      661 ccggcaaatt cgggagaatc gtagcgtacg gaaatgaggc gtgcttcggg ttcggcaatt
      721 ttgtttacac ccaaatagtc gcttttgcta tcccaaggat tgatgtcgcc ggtgtctttc
      781 aggacgctgt tcaaacggcc gacgcgcaat ttaccgaagc cacctttcaa accgatgaag
      841 gattggcggt tgccccaacc ggagtcagta ccggcgatag atgccttttg ctcaacctgc
      901 caaatggctt tcagaccgtt accgaggtct tcttggcctt tgaagccgat tttcgaaccc
      961 aaatcaacga tgccggtacc ggtttcaacg ctagccgcct gagctccatt gtgagctacg
     1021 gagcgggaag tttctacgcc ggctttgatg gtgccgtaca gggtaacgtc agccattgct
     1081 gcaacaggaa gggctgccaa agtcagggca atcagggatt ttttcattgc tgtattcctt
     1141 ttttggttaa gaaatttaag ccggccgggc tttccaagcc gcttagcttt gcatttaccg
     1201 ccgacgtttt cggcgattcc atgtctgaaa ctatagatgt tcctgtctga aaaaacaaac
     1261 ttctgcctgt ttttgtgtgg aattcgatgt gtattttgaa gggcggatag agatattatg
     1321 ggtatttttt gttttataac atatggttat ttaaattttt taagatttgc atttttacaa
     1381 cacttactcg ggagggtatt ggagggcatt gcaaaccggg ggttataaag acagcaaaaa
     1441 acgcgcacgt ggtttctttc ggaacgggcg gatgcaaaac ccgcccctgc ggcagga
//
LOCUS       DAWKOX010000239         1483 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.239, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000239 DAWKOX010000000
VERSION     DAWKOX010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1483
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.239"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..951)
                     /locus_tag="WJK78_001967"
     CDS             complement(<1..951)
                     /locus_tag="WJK78_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ7598838.1"
                     /translation="MNKTLKRRVFRHTALYAAILMFSHTGGGGAQAQTHNYAIVMNEQ
                     NQPEVKQEGSYSTLREKDRERKFIYNKGRSGGGSVSFNNSDELVSRQSGTAVFGTATY
                     LPPYGKVSGFDADGLEKRNNAAGWIRTTRIALAGYSYASVVCKSSTGCPKLVYKTRFS
                     FDNPDLEKIGGRLDRHTDPSRDNSPIYKLKDHPWLGVSFNLGSENTVKNGKSSSKLIS
                     SFNENNNNQTIVSTTEGDPISLGDQQREHTAVVYYLNAKLHLLDKKGIKDITDKTVQL
                     GVLKPSIDVKTQKTGFSGILSFWANWDIKDTGQIPVKLGLQ"
BASE COUNT          312 a          395 c          390 g          386 t
ORIGIN      
        1 ctgcaggccg agcttgactg gaatctgccc ggtatcttta atgtcccaat tagcccaaaa
       61 agatagaatg ccgctaaacc ccgtcttttg tgtcttcaca tcgatgctcg gcttcaagac
      121 acccaactgc actgttttgt cggtgatatc tttaatccct tttttgtcca gcaggtgcag
      181 tttggcgttc agataataga ccacggcggt atgttcgcgc tgctggtcgc caagggaaat
      241 agggtcacct tctgtcgtag agacgatggt ttgattatta ttgttttcat taaaagaaga
      301 tatcaatttg ctggatgatt tgccattttt gacggtattc tcgctgccca aattgaaaga
      361 cacgcccaac catggatgat ccttcaattt gtaaatgggc gaattgtcgc ggcttgggtc
      421 tgtgtgccta tccagcctgc ctcctatttt ttccaagtcg ggattatcga aggaaaatcg
      481 ggttttatag acaagtttgg gacagcctgt gctgcttttg catacgacac tggcgtagct
      541 gtagcctgcc agcgcgatgc gggtggtacg aatccaaccg gcggcattgt tgcgcttttc
      601 cagcccgtcg gcatcaaaac cggaaacctt gccgtagggc ggcaggtagg tggctgtgcc
      661 aaaaacggca gtaccgcttt gtcgagaaac aagctcatcg ctattgttga atgagacaga
      721 gcctccaccc gatcggcctt tattatagat aaatttgcgt tccctgtctt tttcccttaa
      781 ggttgaatat gaaccctcct gctttacctc cggctgattt tgttcgttca tgacaatagc
      841 gtagttatgg gtttgcgcct gcgccccccc cccgccggta tgggaaaaca tcaagatggc
      901 ggcataaagc gcggtatggc ggaaaacccg cctttttaaa gttttattca tcgtatttcc
      961 ttttcggtca aaccccccgc ccttcggggc ggcaggatca ggctttgtcc gggaggggtg
     1021 cagccccttc cgaatcaggg cggcgcctta tgtgccgccc tgcgtgttgg aacatatttt
     1081 atcccttaaa tcttgcttcg cgggataccg tcggcggcag gcgcgccgca aacggcggga
     1141 ttcggcaaac cgcctgattc cgcgcccgcc gaattgccgg ttggaaaacc cctttggccc
     1201 ggctgccaaa gggggatgtt cggaaaagta acacgcccct ttggccggat gcaatgtata
     1261 gggttaccgc attattctac ccttgcgcgc tgatcatggt aaagcggttt tcggcaatcc
     1321 gcaaccgcct ccttggcccg ccattgccgc gaaagcggga atccggaacg taaaatctca
     1381 aaaaaaccgt tttatccggc aagtttgccc gccggcaggc ccgccattgc cgcctgcgcg
     1441 gcaatggcgg gccggggagg cggcattttc caagttgcgg caa
//
LOCUS       DAWKOX010000240         1441 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.240, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000240 DAWKOX010000000
VERSION     DAWKOX010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.240"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            27..1364
                     /locus_tag="WJK78_001968"
     CDS             27..1364
                     /locus_tag="WJK78_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ7598839.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRALRPSTQWLWVGRMGVSACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIAATIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYLISAVIMPVGALSVA
                     VFTAWIQDRQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLDIL"
BASE COUNT          261 a          339 c          389 g          452 t
ORIGIN      
        1 tatcttcaca tttcttaata aattttatga gtaaccatac ttcttggtcg tccaaaatcg
       61 gtttcgtgct tgctgcggca ggttcggcca tcggtttggg cgcgatttgg aaatttcctt
      121 atacggcagg caccaacggc ggcgcggtgt ttttcctgct gtttttgata tttaccgtct
      181 tggtcgccct gcccgtccag cttgccgagt tttatatcgg gcgcacaggc ggtaaaaatg
      241 ccgtcgattc cttcagggct ctgcgtccga gtacgcaatg gctttgggtc gggcgcatgg
      301 gcgtttccgc ctgctttatt ttgctgtcgt tttacagcgt ggtcggcgga tgggtattaa
      361 attatgtcgt ccacagtttc acgggggcgg ttcataccgg cgcggacttt gaagccttgt
      421 tcggcgcgac gatttccaat ccggcaggtt cgctgtccta tcaggcactg tttatgctga
      481 ttacggtttg ggtggtcaaa ggcggcattt cagacggcat tgaaaaggca aaccgttatc
      541 tgatgccggg gctgtttatc ctctttattg cgctggcaat ccgttcgctg acgctgccgg
      601 gtgcaatgga gggcgtgtct ttcctgctca aaccgaattg gtcgtacttt aaagccgata
      661 cgatgattac ggctttaggt caggcgtttt ttgccttgag catcggcgtt tccgctatga
      721 ttacctatgc ttcgtatttg ggaaaagatc aggatatgtt ccgctcgggg catacgatta
      781 tgtggatgaa cctcttggtt tcgctgttgg caggtttggt gatttttccg gcggtgttcg
      841 ccttcggttt tgaaccgagc caggggccgg gattgatttt tatcgtattg ccggcggtgt
      901 ttatgaaaat gccgttcggt acggttttgt ttgcggtatt tatgctgctg gtcgttttcg
      961 ccacgctgac ttcggcattt tcgatgttgg aaacggtcat cgccgcaacc atccgccaag
     1021 acgagcgcaa acgcaaaaaa catacttggc ttatcggcac ggctattttt attgtcggca
     1081 tcccgtccgc gctgtctttc ggcgtatggg gtgagtttaa ggttttcggc aaaaccattt
     1141 ttgatttgtg ggactacctt atttctgcag tcatcatgcc tgtcggcgca ttgagcgttg
     1201 ccgtatttac cgcttggatt caggacaggc agtctgtgtt aaaagatgcc ggcgcgggca
     1261 gcaccgtacc acgggcagtg ttgctgctgt ggctgaatac cttgcgctac ctcgccccga
     1321 ttgccattat tattgttttc atcaattctt tggacatcct ttaaaagcca tccaaacagc
     1381 aaaaatgccg tctgaaagcc tttcagacgg catttttgct tcaggttcag cctatttcgt
     1441 t
//
LOCUS       DAWKOX010000241         1426 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.241, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000241 DAWKOX010000000
VERSION     DAWKOX010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.241"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            159..407
                     /locus_tag="WJK78_001969"
     CDS             159..407
                     /locus_tag="WJK78_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598840.1"
                     /translation="MNIKNEIVALISKKIDGGQYSSLENFALSVLREKIIKNTVSSDE
                     KLLIINDFLSGFLEFDPETGKPVGETLKIEQMIDFFLV"
BASE COUNT          449 a          199 c          310 g          468 t
ORIGIN      
        1 ttatttgagg ttttcggtaa gtgtagatat aaggttgagt tataaccaat cattcaggct
       61 ctgttaggct tggcaactca acctgtgctt gctgaaattg ggtatacagt tatacgtttt
      121 aagcgggctt cgctcccttt atcatttaag ggtaatttat gaatattaaa aatgaaatag
      181 ttgctttaat ttctaaaaaa attgatgggg ggcaatatag ttctttagaa aattttgctt
      241 tatccgtact aagggaaaaa attataaaaa atactgtttc cagtgatgaa aaattattga
      301 ttattaatga ttttttatca ggttttcttg agtttgatcc tgagaccggg aaacctgtcg
      361 gggagacgct taaaattgag caaatgattg atttcttttt agtctaaatc atacatacca
      421 gtgaacaagc taggcttata tccggctttt aaatacgatt gtcaggttta tacttgggat
      481 aaaatcaaaa ataaagttgt ttaaactcta gtagattaac aaaaatcagg acaaggcgac
      541 gaagccgcag acagtacaga tagtacggaa ccgattcact cggtgcttca acaccttaga
      601 gaatcgttct ctttgagcta aggcgaagca acgccgtact ggtttttgtt aattcactat
      661 attgcatggt gcagcattaa atcagtcttc tagcgccgca atgggaaaac atagaagata
      721 aacgaaatgg atgatctaat actatatttt ttatcaggta tattcggaaa tcaagttgct
      781 gaatgtatta taaaaaacaa ccgtgagata aaagttccct ttattgtgct ttacgcaata
      841 ttttttacgt tgatttatac tgtggctttg ttgtttctca gtctgatcta ttgggtcaat
      901 ggtgcggaga ttgcatggaa ggggataggt attttcagta tgtcggtcag tttttgtata
      961 gtcttctgtc tttatttgat tgacaaggca ggaagatgta aggataagaa acaataggga
     1021 tcagatgcgg cagcaaacgt agattgggtc taggcttaac ctgcgtttgc tgcatctttg
     1081 gaagaaatag tggattcgaa aaaataggaa gaattctgat taatggtatg cgaggtgtag
     1141 cagtggggac tgttgctggt ggcataaatg gttatgcagg ttctacgggt aagaacactg
     1201 acattcgccg ttaaataata aataaaccaa cttccaacca aacctgctat cggtttggtt
     1261 ggaagtgaga ggaggtaagg tagtgtttgc tgttattttc ttttcgacat tgggctgtat
     1321 tttagcatgg ataagagata ttcctaaaat aaaatcaaaa aaaattttgg caagatcctt
     1381 atatattata ggaataataa atgtaataat cagctatgta ttaatt
//
LOCUS       DAWKOX010000242         1416 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.242, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000242 DAWKOX010000000
VERSION     DAWKOX010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.242"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(45..1229)
                     /gene="ubiM"
                     /locus_tag="WJK78_001970"
     CDS             complement(45..1229)
                     /gene="ubiM"
                     /locus_tag="WJK78_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ7598841.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLFERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNITILTDTAVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGASSL
                     LEKYSNKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT          316 a          304 c          414 g          382 t
ORIGIN      
        1 caaaaatgcc gtctgaaacg tttcagacgg catttcggca gttttcaacc ggtcagttgt
       61 ttggtaatca gctttttcag cggcgggaag ttgttgccgg cacgcaatac caaaccgcgc
      121 agcagttttg ccggcgcggt ttcgttggta aacagtttca gcatcatatt ggttccgtga
      181 taaagcggat gggcgtgcag catatgtttg ttgctgtatt tttccaacaa ggaagatgcg
      241 ccgatgtcct gaccgcgttg ttcggcttcg agtatcagtt ttgccagaat atctgcgctg
      301 gaaagaccca agttgaagcc gtgtgccgtt acagggtgca taccgaccgc cgcatcgcca
      361 atcagcgcgc tgcgtttgcc gtagaaacgt ttggcaatca taccgacaag ggggtaatgg
      421 tggatgctgc tgaccaattc catatcgccg agcctgccct tgagctgttc ttttacgctt
      481 gccgccaatt cttcgggcga aaggttttga acgctgttga ttttatcggt atcgacggta
      541 atgacggtat tggtcaggtg ttcttccagc ggcagcagtg cgatggtgcg cccgtaatgg
      601 aagcattcgt aagcggtatg ttggttggaa agagtatgtt tcatgcggca gacgaacatg
      661 gttcggctgt agtcgtgcat atctgaagaa atgccgagtt gtcggcgggt ttgcgaaaaa
      721 cggctgtctg ccgccaaaag caggcgggcg gtcaggattt tgccgttttc taaaatgact
      781 tgtgcttcgt tgtcagatgt tttgacttct ttaacggccg tatcggtcag aatggtaatg
      841 ttgtcgagtt gggatacgac ttcgtaggca gcgcggcgga tattgtggtt ggaaatcaga
      901 tagcccaaac agtcggcagg ctcgccgcgc gcctcggtcg gttggggaaa gtggagctgg
      961 tagtcggaac gtccgttcag cactttggca tcgcgcaaag ggtagatttc gttttcggga
     1021 attttgtccc acatacccaa acgctgcatg atttcgcggg aaaaatgggt cagggcgatt
     1081 tcgcgtccgt catatggagg attttgcaga acagtcagtg ggctgcgttc gaacagggta
     1141 actttcaaac cgctgccggc aagttcggct gcaaaactta aacccgccgg gcctgcgccg
     1201 acgacgagga tgtcgctgtg taaactcata aaatatcctt tgcatagacg gatgccgatg
     1261 atttcagacg gtatttgtaa gggtttgaat gccgtttgaa ctatctgtaa cagataggcg
     1321 attatatcaa aacccactgt tgaagaaata tgcaggggag ggtgtatgcg gatttttact
     1381 ttcagcttaa tgtgtatcaa atcgggtgtg gggtat
//
LOCUS       DAWKOX010000243         1413 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.243, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000243 DAWKOX010000000
VERSION     DAWKOX010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.243"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..739)
                     /locus_tag="WJK78_001971"
     CDS             complement(53..739)
                     /locus_tag="WJK78_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ7598842.1"
                     /translation="MYAFTDAQQQKALFRLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYIFSVLFHDGGWTGLGALS
                     QFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWVAPTASTVIGNALDTLVFFA
                     VAFYASSDGFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(816..1289)
                     /gene="queF"
                     /locus_tag="WJK78_001972"
     CDS             complement(816..1289)
                     /gene="queF"
                     /locus_tag="WJK78_001972"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ7598843.1"
                     /translation="MSRNNEELQGISLLGNQKTRYPTEYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIVIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     regulatory      complement(1293..1337)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
BASE COUNT          353 a          298 c          432 g          330 t
ORIGIN      
        1 ttaatccact ataaaagaaa acccaaccgt cccgattccc ggcagggctg ttttacggat
       61 tttgcagcga gggcgcgggg cggtcttgcg cctgtttggt ttgcagggtc gtcagttttt
      121 tcgtcagcag attcagaatc acgccgtagg cgggcaggaa aaacagaccg cagacggtaa
      181 gtttgaacag gtaatcgaca aaagcgatgc cctgccagtt tgccgccata aatccatcgc
      241 tgcttgcgta gaaggcaacg gcgaaaaata ccaacgtatc caaggcgttg ccgatgacgg
      301 ttgatgcggt tggggcaacc caccacgctt tcagacggcg taatttgttg aatacaaaaa
      361 tatcaaggat ttgtccgagc gcataggcgg caaagctggc taaggcgatg cgtccgacaa
      421 aggtgttgaa ttgggacagc gcgcccaagc ccgtccaacc gccgtcgtgg aacaaaacgg
      481 aaaagatata ggaaagcaaa agggcgggga acatcaccca aaagataatc cgccgtgcca
      541 agtgcgaacc gaaaatgcgg acggtcaggt cggtggcaag gaagatgaag ggaaaggaaa
      601 atgcgcccca agtggtgtgg atgccgaaaa tttggaaggg gaactgcacc agatagttgc
      661 tggcggcgat gataaggata tgaaaaagca ccagccggaa gagtgccttc tgttgctgtg
      721 cgtcggtaaa tgcgtacata aaaaaacctt tcggaaaggc gttcagacgg cataccgtat
      781 cgaaagaatg ccgtctgaaa tatgggaagg atggtttatt gtgcgtcgtg ctcaaacagg
      841 cgtttacgcg ccaatgcttc aaactcggtg cctgctttgc cgtaattggc gaaaggatga
      901 atggcgatgc cgccgcgcgg tgtgaactcg ccgaatactt cgatgtattt cggatccatc
      961 agggcaatga ggtctttcat gatgatgttg acgcagtctt catgaaaatc gccgtggttg
     1021 cggaagctga agaggtagag tttcagggat ttgctttcca ccattttgat gtgcggaatg
     1081 tagcggatga cgatggtggc gaagtcgggc tgcccggtca tggggcagag gctggtgaac
     1141 tctgggcaga cgaatttgac gaaatagtcg ttgtcgggat gtttgttgtc gaatgcttcc
     1201 aaaatttcgg gcgcgtattc ggtcgggtat cgggttttct gattacccaa aagcgagatg
     1261 ccttgcagct cttcgttgtt gcgggacata gggtttcctt agttttttag tgtgggaggt
     1321 tttcgaacca cggggcggcg attgtaatat aagcggcggt atctgtgtag ttttcttcag
     1381 acggcatggt ttggacggcg gcgttttccg tgt
//
LOCUS       DAWKOX010000244         1398 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.244, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000244 DAWKOX010000000
VERSION     DAWKOX010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1398
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.244"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..326
                     /locus_tag="WJK78_001973"
     CDS             <1..326
                     /locus_tag="WJK78_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HEZ7598844.1"
                     /translation="ATTVPAQQTFLDAAELMQWSIETEWLGLNVIAHCNFGKQHAQVE
                     FEACFQDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGKY
                     LKPVA"
     gene            complement(545..1339)
                     /locus_tag="WJK78_001974"
     CDS             complement(545..1339)
                     /locus_tag="WJK78_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ7598845.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHHKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVEWIRENQ"
BASE COUNT          371 a          415 c          311 g          301 t
ORIGIN      
        1 tcgctactac cgttccggcg caacaaacat tcctcgatgc cgccgaactg atgcaatgga
       61 gtatagaaac cgaatggctg ggcttgaatg tcatcgcaca ctgcaacttc ggcaaacagc
      121 acgcccaagt cgaatttgaa gcctgcttcc aagacggaca acaccgatcc gcacatcacg
      181 aactgtccgg cttcgtcaac atcggcggac aatggtattt tatcgatccc accgttccgc
      241 atcctgcgat gaaacaaccc tgcatttgcg gatcgggcaa aaaattcaaa gcctgctgcg
      301 gcaaatatct gaaacctgtc gcataaaaat gccgtctgaa cgttcagacg gcattttcaa
      361 cgtgcaaaaa aaaaccattc ataccaaggg taagtatgaa tggtcaatac attgcgggaa
      421 aacgtcttac ttgctgcact gccgaaaagg gagaaacggc agcggtaatc agcggaaagg
      481 attgtacccg aattaatgtt aagaaacgtt aatcgtgaaa atatattaac aaacctgttg
      541 aaacctattg gttttcccgt atccactcga cccagcgttc aaacagcttc ggttcgagcg
      601 cggcgacgac cgagcgtttg aacacgtgtt caccactcca aaacccgtcg ccttccaaag
      661 tcgtcagcct gccgcccgcc tcctcgaaaa tcaacgcgcc ggcggcataa tcccacagct
      721 tctgcccgcc gtggacataa acatcataac gcccgcacgc cagataacac cagtccaacg
      781 tactgctgcc catactccgt atcgttccaa aaggcgcgag cgtactcatg cggctggaca
      841 gtttgcccga acgcagatat ttgatttcca cgcccgcgat tgcctcattc aacttcttat
      901 ccacgagacg caaaggcagg cgtgtcccgt ttaaaaacgc accctgcccg cgttcagcat
      961 aaaaacattc gccgctgacc ggattgtaga ttacgcccaa ttcggcgcgc ccgttgcgga
     1021 caaacgccac cgacacggca aaatgcggca gcccgttgac aaaattgttt gtcccgtcta
     1081 tcggatcgac aatccacagc cccttttccc ccgaatattg ttcccacaga gccgactgtt
     1141 cctgtcgcga catttcctcg cccaacatcg ggcaatcgat cagaagcggc aacgcggcgg
     1201 caaaagccgt ctgcgcggca atgtccgcct cgctcaacat cgaaccgtct tccttgtggt
     1261 gggacggcgt attcaaaaaa cgcggcataa tttcggtttg cgcgatatgg cgcacgactt
     1321 tctgcaaacg gtgtaacact tcctactgtc ctcatatttt gaacttgcgg cacgcgaacg
     1381 tatatagtgg attaaatt
//
LOCUS       DAWKOX010000245         1372 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.245, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000245 DAWKOX010000000
VERSION     DAWKOX010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1372
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.245"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..797)
                     /locus_tag="WJK78_001975"
     CDS             complement(<1..797)
                     /locus_tag="WJK78_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598846.1"
                     /translation="MYSNNAITNNRNNITLGAYRDAIIFIFSDENVVRAIGTINSMYE
                     EYLTRSHKIDQKEFLREGERLSAKAREFQRTAEEAQKSLKEGIGRAASKFRGNSKEAF
                     VARKVQSDLQKALNASNYNKQQYARRAATALENASKSKVMAANLGKFTYGATVAMGTL
                     SMGSAWWKALDGEGNWSDVGLSSASFLGGLMGVQWGAALGVGAFGLLTGGAGWLVVGA
                     ILGGGAGAWWGSLGAEKAWRWFEDFLNLNRSDKYHVYDPLALDLDGDG"
BASE COUNT          472 a          302 c          168 g          430 t
ORIGIN      
        1 ccgtcgccgt ctagatctag ggcgaggggg tcgtaaacgt ggtatttgtc gctgcggtta
       61 agatttaaga aatcctcaaa ccatctccaa gctttttcag ctcctaatga tccccaccaa
      121 gctcctgcgc cacctccaag tatagctcca actactagcc aacctgcgcc accagtaagt
      181 aaaccaaaag ccccaacacc caaagccgca ccccattgga cgcccattag cccacccaaa
      241 aaagaagctg atgagagacc aacatcactc caatttcctt ctccatccaa ggctttccac
      301 caagcacttc ccatactcaa agttcccatg gcaacagttg ccccataagt aaacttaccc
      361 aaattcgctg ccataacttt tgattttgaa gcattctcta acgctgttgc cgcacgtctt
      421 gcatattgct gcttgttata gttgctagca ttcaatgctt tttgcaaatc actttgtact
      481 tttcttgcaa caaatgcctc ctttgaatta ccacgaaatt tactagcagc tcttccaatt
      541 ccttctttta agcttttttg tgcctcttct gctgtgcgtt ggaattctct tgccttagca
      601 gacagacgct caccctccct taaaaattct ttttgatcta tcttgtgcga acgggtcaaa
      661 tattcttcgt acattgagtt aatcgtacca atcgccctaa ccacattttc atcagaaaat
      721 atgaaaataa tagcatccct atacgcacct agtgtaatat tgtttctatt attagttata
      781 gcattattcg aatacataat agcacctcca aatttagaac tgaatacgtt tatattctct
      841 gtgtaataat atcaaataat taattaatgg ataagtaagt ccgaaaaaat aacaactaaa
      901 ataagcaata tactgattct ctcctttatt aattagatat attgaaaaac aaataaaaaa
      961 taaacagaaa acattcatgt gaaaaagcca cctcatattc ttatttataa gtttaaaata
     1021 actaggcatt gtatatttaa aaatcggcac atccaacgga aacaaaccac ataaaaattt
     1081 ttctttattc tttattaaag acatagtttt attttttaaa attagtccaa ataatatact
     1141 aacaattact attaaaacaa taagcacagc gtaatttttt ataaaattca ttaaaataat
     1201 aacgaaaata ctaaatagat tacatactat aaattgaaat ataaaatatt cagtatttaa
     1261 tccattttca accgcgagtt ttttaaaata tccttgctcg aaaaaattaa aaaaatccat
     1321 taatactttc ctctcaagaa aactaatttt agtttagtta agataaaatg ca
//
LOCUS       DAWKOX010000246         1352 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.246, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000246 DAWKOX010000000
VERSION     DAWKOX010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1352
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.246"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>1352
                     /locus_tag="WJK78_001976"
     CDS             <1..>1352
                     /locus_tag="WJK78_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ7598847.1"
                     /translation="GFAGALFDHRNQGIRTATGWVSADDGLLVRDLNGNGIIDNGAEL
                     FGDNTKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANEL
                     RTLEELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTDGTTAKMGDLLLAADNLHSRF
                     KDKVELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSAAETKEAQLALLDNL
                     IHKWAETDSEWGKKPPMHLSTSWTQTANGGVALTPSQVTRLKQNALVSLSDKAKAAID
                     AARDRIAVLDAYTGQDSSTLYYMSEEDALNIVKVTNDTYDHLAKNIYQNLLFQTRLQP
                     YLNQISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEMLAYGELRSWYEGRRL
                     MADYVEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNVGFGHNKNVSLYGND
                     G"
BASE COUNT          393 a          323 c          317 g          319 t
ORIGIN      
        1 ggctttgcag gtgcattgtt cgaccaccgc aatcaaggca tccgcaccgc caccggttgg
       61 gtttctgccg atgacggttt actcgtccgc gatttgaacg gcaacggcat catcgacaac
      121 ggcgcggaac tcttcggcga caacaccaaa ctggcagacg gttcttttgc caaacacggc
      181 tatgcagctt tggccgaatt ggattcaaac ggcgacaaca tcatcaacgc ggcagacgcc
      241 gcattccaat ccctgcgtgt atggcaggat ctcaaccagg acggcatttc ccaagctaat
      301 gaattgcgta cccttgaaga attgggtatc caatctttgg atctcgccta taaagatgta
      361 aataaaaatc tcggtaacgg taacactttg gctcagcaag gcagctatac caaaacagac
      421 ggtacaaccg caaaaatggg ggatttactt ttagcagccg acaatctgca cagccgcttc
      481 aaagacaaag tggaactcac tgccgaacag gcaaaagccg ccaatcttgc gggcattggt
      541 cgtctgcgcg atttgcgcga agctgccgca ttgtccggtg atttggccaa tatgctgaaa
      601 gcttattctg ccgccgaaac taaagaagca cagttggcat tgttagataa tttgattcac
      661 aaatgggcgg aaaccgattc ggaatggggc aaaaaaccgc cgatgcatct ttcaaccagt
      721 tggacgcaaa cggctaacgg gggtgtggct cttaccccgt ctcaagtaac gcgactaaaa
      781 cagaacgctt tagtttctct ttccgacaaa gccaaagcag ctatcgatgc cgcccgcgac
      841 cgcattgccg tgcttgatgc ctacacgggg caggattcca gcacactcta ttacatgagc
      901 gaagaagacg cgcttaatat cgtcaaagta accaacgata catacgacca tctcgccaaa
      961 aacatctacc aaaacctgtt attccaaacc cgtttgcagc catatttgaa tcaaatcagt
     1021 ttcaaaatgg aaaatgatac gttcactttg gattttagtg gtcttgttca agcatttaac
     1081 catgtcaaag aaactaatcc gcaaaaagct tttgtggatt tggccgagat gcttgcatat
     1141 ggcgaacttc gttcttggta tgaaggccga agactaatgg ccgattatgt ggaggaggca
     1201 aaaaaagcag gtaaatttga agattaccag aaagtgttgg gtcaggagac cgttgcatta
     1261 ttagctaaaa catcgggtac gcaagcagat gatatcctgc aaaatgtagg ctttggtcat
     1321 aataaaaatg tttctttata tggtaatgac gg
//
LOCUS       DAWKOX010000247         1287 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.247, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000247 DAWKOX010000000
VERSION     DAWKOX010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1287
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.247"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            166..1278
                     /gene="nadA"
                     /locus_tag="WJK78_001977"
     CDS             166..1278
                     /gene="nadA"
                     /locus_tag="WJK78_001977"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ7598848.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEASTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPEAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSHPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGHNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
BASE COUNT          307 a          342 c          377 g          261 t
ORIGIN      
        1 accaaagcgg tttgtcggaa cgaagcgggt cggttttacg gtatcgcaaa cctgttttca
       61 gacgaccttg cttattatac tcaatttgag cataatataa aaatatttca aaatataaac
      121 ggcaaatctt tatgccgtct gaaaaaccag ccataaggaa gtctcatgca aaccgccgcc
      181 cgccgctcgt tcgattacga tatgcccctc atccaaaccc cgacttccgc ctgccaaatc
      241 cgtcaggcgt gggcgaaggt tgccgacacg cccgaccgcg agacggcagg ccgtctgaaa
      301 gacgaaatca aggctttgct gaaggagaaa aacgcggtct tggtggcgca ttattacgtc
      361 gatccgctga ttcaggattt ggctttagaa acgggcggat gcgtgggcga ttcgctggaa
      421 atggcgcgct tcggcgcgga acacgaagct agtacattgg tggtggcggg tgtgcgcttc
      481 atgggcgaga gcgcgaaaat cctctgccct gaaaaaacag tgctgatgcc tgatttggag
      541 gcggaatgtt ctttggattt gggctgtccg gaagaagcgt tttcagcgtt ttgcgaccaa
      601 caccccgacc gcacggtcgt agtgtacgcc aacacttccg ccgccgtgaa agcgcgtgcc
      661 gattgggtgg taacgtcttc ggtggcgttg gaaatcgtat cgtatttgaa atcgcgcggc
      721 gagaagctga tttggggacc tgaccgccac ctcggcgact acatccgccg cgaaacgggc
      781 gcggatatgc tgctgtggca gggttcgtgc atcgtccaca acgaattcaa agggcaggag
      841 ctggcggcgt tgaaggcgga acaccccgaa gcggtggtgc tggttcatcc cgaatcgcca
      901 caaagcgtca tcgaactggg cgacgtggtc ggctcgacca gcaaactgct caaagccgcc
      961 gtatcgcacc ctgaaaaaaa attcatcgta gcgaccgact tgggcatcct gcacgaaatg
     1021 caaaagcagg cacccgacaa agaatttatc gccgcaccga cggcgggcaa cggtggaagc
     1081 tgtaaaagct gcgcgttctg cccttggatg gcgatgaatt cgctgggcgg catcaaatac
     1141 gccctgacaa gcggacacaa cgaaatcctg ttggacagga agctgggcga agccgccaaa
     1201 ctgcctttgc agcgtatgct cgacttcgcg gcaggactca agcgcgggga tgtgttcaac
     1261 ggcatgggac ccgcctgatt tgccgtc
//
LOCUS       DAWKOX010000248         1286 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.248, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000248 DAWKOX010000000
VERSION     DAWKOX010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.248"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(192..455)
                     /locus_tag="WJK78_001978"
     CDS             complement(192..455)
                     /locus_tag="WJK78_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598849.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(474..1256)
                     /locus_tag="WJK78_001979"
     CDS             complement(474..1256)
                     /locus_tag="WJK78_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ7598850.1"
                     /translation="MGEIVGEALVKNTDFSGMTASEIEKAKANITAYAKLVAGATVGV
                     TGGNVDVAANASETAVKNNALDIIWDIGNLVWDGGKWIYAKSIGDKQMAREAAIDFGV
                     DAAAAAVPFVPAGATKISRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTYDKVNKVW
                     TTPAGLDYGLDAKHGNRIKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEAWRMKGNP
                     LPNDSSVYLVDMKKPIGTKGETKVRIVVQKGTNKIISAYPQK"
BASE COUNT          355 a          311 c          213 g          407 t
ORIGIN      
        1 gggatttcgg ttgtcgtgag ggaaaggaat tttgcaaagg tctcaattgg tgttggtgaa
       61 tgccttcggc tgccagcagt tgcattgagg ccgtctgaaa aacggatatt cagacggcct
      121 attgctactt taaataatat ttgggtttaa aatatcatcg tatttcccaa attcggggaa
      181 cagaaaatca attatttaaa tttttcatcc tcataatatg ggtgatcaaa aagctctcct
      241 tcccacatat ttatttcttc tatgccttta tctttcataa actcatgata atcataaaaa
      301 tcttttccat attgtccgta aaaaattttc atatccccaa gccacatagc ataacattca
      361 tcgcataaaa tgacctcccc agagaaatat ttaggctttg catgataaag gtagccttgc
      421 tcacatcttg ggcaaatttt aatttcttta tccataagag attcctttct taattatttc
      481 tgaggatatg cagaaatgat tttatttgtt cctttttgca caacaatccg cacttttgtt
      541 tctccttttg ttccaatagg tttcttcata tctacaagat atacggatga atcatttggc
      601 aaaggatttc ctttcattct ccaagcttca tcaaccaaag gcaaaacttc tttacgggac
      661 acattaaaaa cagaatgaac aggtttgttt ggatttggaa ttgtatgggc taaaacatgt
      721 ttaatcctat taccatgctt agcatctaac ccataatcta accccgccgg tgttgtccaa
      781 accttattaa ccttatcata agtaagcttg attccggtct gcttctgaat ttcctgtatg
      841 gctttagccg tatcaactgc ttcgtctccc gccttcagaa cataagcccc gcctcggctg
      901 attttagtcg cacctgccgg aacaaaggga acggcagctg cggcggcatc cacaccaaaa
      961 tcaatcgccg cttctcgagc catctgctta tcgccaatag atttggcgta aatccattta
     1021 ccgccgtccc atacgaggtt gccgatatcc caaataatat ctaatgcatt atttttaaca
     1081 gctgtttcgg aagcatttgc cgccacatca acattgcctc ctgtaacacc tacagtcgct
     1141 ccggctacca attttgcata cgcagtaata ttcgctttag ctttttcaat ttcagaagca
     1201 gtcataccgc tgaaatcggt attcttaacc aaagcctccc cgacaatctc ccccacgacc
     1261 gcaccaatcg cgccgtcctg acactt
//
LOCUS       DAWKOX010000249         1286 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.249, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000249 DAWKOX010000000
VERSION     DAWKOX010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.249"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(382..917)
                     /locus_tag="WJK78_001980"
                     /pseudo
     CDS             complement(382..917)
                     /locus_tag="WJK78_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1085..1285)
                     /locus_tag="WJK78_001981"
     CDS             complement(1085..1285)
                     /locus_tag="WJK78_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598851.1"
                     /translation="MQLICADWTGIGNFMKTFEKTWSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
BASE COUNT          436 a          277 c          175 g          398 t
ORIGIN      
        1 taaacaacag gattatcgtt aaacatcggt gcagcattca gacgataaga taaagaaacg
       61 acaacacacg ccaacagaaa aacatatttg aacttcatca tattgtccac ataaagggca
      121 gcctgaaaat ctttcaggct gcccttgtca aattattcct agctttcggc ttttttggca
      181 aaccaaacaa tccgattacc cgcataatac tttccattta ttgaaatccg acaagccgcg
      241 cccaaaaatg ccatgcactg tcgatttccg cagcaatctt tgtaccgttt tcttcaaatt
      301 ccaaatattc acccaataat aaacttgaaa cagaacgcgt gggcagcaag tgcccaccct
      361 acgcttattc aaataatttg attaaataaa gaataaagaa aatgcatcag gaacaaaatt
      421 ataatctgcc acctgactca caccgctttt aaagtaaggg gcatcaaaat caaaaccgca
      481 aaaaaaataa tttttgcatt gatttttaat agatttaaaa ttcgaatata gtgtttctcc
      541 agatttaaaa agtttatctt tatctatata tttgatgctt tccctatcca aaataaatat
      601 tcaaacatta aaaaatcatt acatgaccaa gccaaatcat aaatttgatt caaatgggta
      661 tcataaagat aaaaataata aggtttggga acaggtaaaa tatttaatgg aaaaggagga
      721 ctaattttct taatatctga tgactgatat ccatatcttt ctatattctt aaaaatttca
      781 tctttcttaa gataacaaga cattctgaca atcacaacct gttcatcgga tatattatct
      841 atttgcatgg cgcgtataac acgccatgcc tgattaaaat tagtctccct taccttagaa
      901 tctattatct tttccaaaga tgaaaatgcc ccttatcttg aactctccag ttagaacctg
      961 gaagtttcgt acctcttaaa tgtgtattaa tatttcttat agtttcatta aaatgccacg
     1021 cgctgccgat ttcaacggta attttcgtac cgctttcttc aaattccagg tattccccca
     1081 ttagctaacg caaagaagca gacgccattt cggcttcgtt atgataaacc cgccttccgt
     1141 tgatatagac ttccgcccct gtccgctcca aattccaaaa attccgtact gaaatttcca
     1201 tatcccgata ttgtgcagac catgtttttt cgaaggtttt cataaaattt cctatacctg
     1261 tccaatcggc acatatcaat tgcatt
//
LOCUS       DAWKOX010000250         1257 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.250, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000250 DAWKOX010000000
VERSION     DAWKOX010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1257)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1257)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1257
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.250"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..890
                     /locus_tag="WJK78_001982"
     CDS             <1..890
                     /locus_tag="WJK78_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ7598852.1"
                     /translation="TAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKA
                     NLPKDAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAQNPALKNLSP
                     AQRRELADNIIAEKVRQQAVMQNSRVGEAEVDRFIEQAQKQGITLPEGAPLRQYRAQH
                     ILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVM
                     VPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAE
                     QATVNLLRDLHSGAYVDIR"
BASE COUNT          336 a          382 c          326 g          213 t
ORIGIN      
        1 ccacggcgca aaaagaagcc gcacccgcac aacagcaggg cggtatccgc ttttcagacg
       61 gcattgccgc cgttgccgac aacgaagtca tcacgcgccg ccggcttgcc gaagccgttg
      121 ccgaagccaa agccaacctg cccaaagacg cgcagataag cgaatccgag ctgtcccgac
      181 aggtgctgat gcagcttgtc aaccaatccc tgatcgtaca ggcgggcaaa cgccgcaaca
      241 ttcaggcaag cgaagcggaa atcgatgccg tcgtcgcaca aaatcccgcc ctcaaaaacc
      301 tcagccccgc ccaacgccgc gagcttgccg acaacatcat tgccgaaaaa gtccgccagc
      361 aggcagtgat gcaaaacagc cgggtcggcg aggcagaggt cgaccgcttt atcgagcagg
      421 cgcaaaaaca aggcatcacc ctgcccgaag gcgcaccgtt gcgccaatac cgcgcccaac
      481 acatcctgat taaggccgac agcgaaaacg ccgccgtcgg cgcggaaagc accatccgca
      541 aaatctacgg agaggcccgc agcggcacag acttttccag cctagcgcgc caatattcgc
      601 aagacgcgag cgcgggcaac ggcggagatt tgggctggtt tgccgacggc gtgatggttc
      661 ccgcctttga agaagccgtc cacgcgctca aacccggaca ggtcggcgcg cccgtccgca
      721 cccaattcgg ctggcatatc atcaaattga acgaagtgcg cgatgccggc acacctcagg
      781 aacgtatccg caattccgtg cggcaataca tcttccaaca aaaagccgaa caggcaaccg
      841 tcaacctgtt gcgtgacctg cattccggcg cgtatgtcga catccgctaa ggcggtttga
      901 agcaaaaagc cataccgatc ggcaaaaatc cgggcggtat ggctttttgg atttcgagtt
      961 acttttacac cgtcattcat cattcccgcg taggcgggaa tctagcaacg aaaagtaaca
     1021 ggaatttatc gggaaaacag aaacctctat gccgtcattc ccgcgcaggc gggaatctag
     1081 gacgtagaat ctaaagaaac cgttttatcc gataagtttc tgtaccgaag aatctggatt
     1141 cccgctttcg cgggaatgac ggcatatcag tttctgtgcg gataaaccta gattcccatc
     1201 tgcgtgggaa tgacgattca gaagttgccc gaaacctaaa aaactgaaac cgaacga
//
LOCUS       DAWKOX010000251         1253 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.251, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000251 DAWKOX010000000
VERSION     DAWKOX010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1253
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.251"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            236..1189
                     /locus_tag="WJK78_001983"
     CDS             236..1189
                     /locus_tag="WJK78_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ7598853.1"
                     /translation="MGFLIGLSRNLTRFTALVILLASAVAFIGPASFAWVKGDVQVLV
                     LGIIMLGMGMTLGREDYRILAQRPLDVFIGAAAQYTVMPLLAIGIAKLFDLSPGLTLG
                     LVLVGTCPGGVSSNIMSFLAKGDVAFSVGMTTVSTVLAPAVTPLWMTCLVGQTVDMDG
                     WGMFRFMLLVTLLPVVLGSAANILLHGKHWFENVRAVMPGVAVLAFACIVGGVASVHG
                     HRFAESALVMVLAIAVHNIAGYVSGYYAAALFGMDTAKKRTLAIEVGVQNAGLATGLS
                     AKFFPGNPESAVAAAVACVWHSVSGTVLGNLFALWDKRRDA"
BASE COUNT          200 a          272 c          432 g          349 t
ORIGIN      
        1 aaaccggatg attcgggcta aataattcct gattctttgg atatagccaa cggtatgcct
       61 gccgatgccg tcagaaaggg cttgatgggc gtttgcggtt cgggttaata tttgtgctgt
      121 atctgttaat tccggttagt aaaatggggc ggggacgatg agtggccgtc ggtcggtttt
      181 gcacgggcgg taataatgtc cggcgcaagg tgcgccgttt cgggaggggt gtgtgatggg
      241 ttttctgatt ggtttgagcc gcaacctgac gcggtttacg gctttggtca ttttgcttgc
      301 gtcggcggtt gcgtttatcg gaccggcttc gtttgcgtgg gttaagggcg atgttcaggt
      361 cttggtgctg ggcatcatta tgctgggtat ggggatgact ttgggcaggg aggactaccg
      421 gattttggcg cagcgtcctt tggatgtgtt tatcggtgcg gcggcgcaat ataccgtgat
      481 gccgttgctc gccatcggta ttgccaagct gttcgacctt tcgccggggc tgactttggg
      541 gctggtgttg gtggggacgt gtccgggcgg cgtgtcgtcc aacattatga gtttccttgc
      601 caaaggcgat gtggcgtttt cagtcggtat gacgacggtg tctacggtgc tggctccggc
      661 cgttacgcct ttgtggatga cctgcctggt cggtcagacg gtggatatgg acggttgggg
      721 gatgttccgg tttatgctgc tggtcacgct tttgccggtg gtgctgggtt cggcggcaaa
      781 tatcctgctg cacggaaaac attggtttga aaatgtccgt gccgttatgc cgggcgtggc
      841 ggtattggca tttgcctgca ttgtcggcgg cgtggcttcg gttcacggac accgttttgc
      901 cgaatcggcg ttggtaatgg tgttggcgat tgcggtacac aatatcgccg gctatgtgtc
      961 aggctattac gccgccgcgc tgtttggtat ggatacggca aaaaaacgca ccttggcaat
     1021 cgaagtcggc gtgcagaatg ccggtttggc aacaggattg agcgcgaaat ttttcccagg
     1081 caaccccgaa tcggcggttg cggcggcggt cgcctgcgtg tggcattcgg tttcggggac
     1141 ggtattgggc aacttgttcg ctctgtggga caagcgtcgg gacgcttagt cgggcgtgtc
     1201 cgaaccgtcc cacgatatat agtggattaa ctttaaaccg gtacggcgtt gcc
//
LOCUS       DAWKOX010000252         1233 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.252, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000252 DAWKOX010000000
VERSION     DAWKOX010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.252"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            41..373
                     /locus_tag="WJK78_001984"
     CDS             41..373
                     /locus_tag="WJK78_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ7598854.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGTESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GEACACGH"
     gene            705..1214
                     /locus_tag="WJK78_001985"
     CDS             705..1214
                     /locus_tag="WJK78_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ7598855.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT          331 a          230 c          293 g          379 t
ORIGIN      
        1 accttgtttt gacggaaaac catcatataa aggaacactt atgcagattt tatcttttca
       61 accggacatt gcggaacgta tgctggaagg tacggaaggc gagtcggtca acgaaaacgc
      121 acaattcgtc cgtacggaca acggctattg gattgcgtgg catgaaggcg tagcggcact
      181 gcttgcgccc gatacgccgc cgggcattcc ctgtttttgg gtggaaggca cggaaagcct
      241 tgaagagttg tgcgtcatgg tggaacgcgg cgagtttgac gaagtggaag agtttgacgg
      301 cgatgacgac gaatggctcg aaacggcaca gggttgcggg caccacggcg aagcttgcgc
      361 ctgcggacat taaaggcatt gcaggcttgc cgcaaggggt gcaaggcttt gccgtttttt
      421 aaataatcgg tggattgcat ctgtttgcaa tgggcggaac gcttcccttt gtattttatt
      481 gaataaaaaa acttatcttg gtattataat taaggcatca tcaattattt tgggatggca
      541 ataaacgcaa agcattgatt tgcgccgatt gcagacttat tatagcaggt tgcggcgcgg
      601 acttaatggg aattgtttat agagcatgat ggtctgaaac atcattaatt aaaaatacca
      661 ttaatccgat ttatatttat ttcaatttca atggaaaaac atcaatgaca atgattttaa
      721 gcattttaag cctgtttttt atcatcagac tgttattttt agccgtctct attaaacatg
      781 aaaaagcctt gattgccaaa ggggcgaaac aatacggaaa aaccaattcc acgctgcttg
      841 cggcagttca tacgctttat tatttggcgt gttttgtttg ggtatggctt tctgacactg
      901 cttttaatgg catatccttg attggtacgc tgacggtgat ggcttcgttt gtgatattgt
      961 cattgattat taagcagttg ggggagattt ggacggttaa aatctatatt ttaccaaatc
     1021 atcaaattaa tcgttcgtgg ttgtttaaaa cattccgcca ccccaattat tttttaaaca
     1081 tcatacccga actgattggc atcgccttat tatgtcaagc gtggtatgtt ttattgattg
     1141 gcctgccgat ttatttgctg gtcttattta agcgtatccg acaagaagaa caggcgatgg
     1201 caacactttt ttaacccgtt tcatcaatta tag
//
LOCUS       DAWKOX010000253         1225 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.253, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000253 DAWKOX010000000
VERSION     DAWKOX010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1225
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.253"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(383..793)
                     /locus_tag="WJK78_001986"
     CDS             complement(383..793)
                     /locus_tag="WJK78_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598856.1"
                     /translation="MKIYNLDNIITSSALSLYKSTWVKLDLISCAKFIIKGTDFTFDW
                     DEGIENWIVFFHKNKVIGYLCAKLPFAILDNEQLKNQLYHKYPHVLTLQIKNIETEKI
                     SLNVNICRLTLCPSFHDEHDTLVCSVQDFYVNTV"
     gene            complement(797..>1225)
                     /locus_tag="WJK78_001987"
     CDS             complement(797..>1225)
                     /locus_tag="WJK78_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ7598857.1"
                     /translation="PAKQATPNGKAGVSTQQSLQNSLVPQKNYTHTTYNGGSAITDGK
                     YITDPLSMVRHKPDASSLDKIDSKSLFKSDVDAEKATLDAARYADKHNLWDSQNKAKV
                     PTNDVVGYTDGKPTHIINIYRRKPNKDGFRPVHGTPGKER"
BASE COUNT          365 a          220 c          204 g          436 t
ORIGIN      
        1 ctctacggat ggggcggagt tacccgtatg attgccgtat ggtcggatac ttgtatccga
       61 caaaaatatt tgacgcgtct atcgtttccg aaatgccgct gttgaaaaac gtcggattcg
      121 agaatccgac ctacggttgc tgaacaatgt tttgtagaac ttgctcaaaa tccatgtttc
      181 gccattttcc tttatatata cctaatgcag cacgggttac gatttcgttt aagtcataaa
      241 tagccattta cgtcctctgc taattttcag cgagtagatt gggttaccaa acccaacaaa
      301 aaagcagcct gaaaaatttc aggatgcttg ttttatgttt tttatcaatg aattaggttt
      361 taatccagcc tgcgcttgct agttaaacag tatttacata aaaatcttgc actgaacaaa
      421 caagcgtatc atgttcatca tgaaatgatg ggcataacgt taatctacaa atgtttacat
      481 ttaaagatat tttttcagtt tcaatatttt taatttgtaa ggttaataca tgaggatatt
      541 tgtgatatag ctgatttttt aattgttcgt tgtctaatat agcaaaaggt aattttgcac
      601 acaaataacc aataactttg tttttatgaa aaaaaactat ccaattttca attccttcat
      661 cccaatcaaa agtaaaatcc gttcctttta tgataaattt agcacaagat attaaatcta
      721 acttaaccca agtggattta tacagactca atgctgatga agttataata ttatctaaat
      781 tataaatttt cataaatcaa cgttccttac ctggtgttcc atgcacaggt ctaaacccat
      841 ctttattcgg ctttctacga taaatgttaa ttatatgtgt cggttttccg tctgtatagc
      901 caactacgtc gttcgttgga acttttgcct tattttgact atcccataaa ttatgtttat
      961 ctgcatatct agcagcatct aatgtagctt tttccgcatc aacatctgat ttaaataaac
     1021 ttttgctatc tatcttgtct agactagatg catcaggttt gtgtcgtacc atactgagag
     1081 ggtcagtaat atatttacca tctgtaatag ctgatccacc attataggta gtatgcgtat
     1141 aatttttttg tggaacgaga ctattttgca aagattgttg tgtagaaacg ccagctttgc
     1201 cattaggagt agcttgcttc gctgg
//
LOCUS       DAWKOX010000254         1155 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.254, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000254 DAWKOX010000000
VERSION     DAWKOX010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.254"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(263..1117)
                     /locus_tag="WJK78_001988"
     CDS             complement(263..1117)
                     /locus_tag="WJK78_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ7598858.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWNVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT          320 a          343 c          297 g          195 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccactataa aatcccgtca ttcccgcgca ggcgggaatc
       61 cggacatcca acgctgcagc aatttgtcgg aaataaccga aactcaaaaa accggatgcc
      121 cgcctgcgcg ggaatgacga tgcaaagatg gtcgttattt cggataaata tccgtctttt
      181 cgttccggat acccgctttc gcaggaatgg agatggaaag atttcagcct attcggcaat
      241 catcaaatac cgcttcccaa ctttattttt gatgcgacag ccggccggca accaaggtgg
      301 cggcgatgac gacaaacacg cccaaggcgg acacgggcga caggtgttcg cccaaaatca
      361 aaaccgccag cagcacgccg acgacgggtt cgagcgaaat caacagtccc gaaacgttgg
      421 caggaacacg gctcatcccc ttgttccaca gccaataggc gtaccagccg caccccaagc
      481 ccaaatacag cagcgacaat accatcccga cgttccagtc cacggtataa ctttgcgcca
      541 aagcaagcga aaacggcagg cacatcaacg atgcggcggc aatggaaaca gatgtgaatg
      601 ccggtgcgcc gatgcgtgca atcagccttt gcgtcggacg catagcggca caaaagcccg
      661 cgcccgccaa caacaccagc aggcagccga accagccgac ttcgccgccc tcttccgcac
      721 cgcccgccat cagcagcgcg acaccggcaa atgccgccgc gccgcatatc cagtggtagg
      781 cacgcgcttt gtcgttgaag aaaaagtgtc cgacaaacac catcagcagc ggctcgagtc
      841 cgacaatgac cgatgcgctg gcggcggaag tgtatttcaa cccgacaaac tgaagcagca
      901 gggtcagcac atagttgacg aacgacacaa tcagcaacgg cttccattcc tcacgcggaa
      961 tcttgccgac atgacggcgg caggcgggca gtgcaggcag cgcagcaatc agcaggcgca
     1021 cgccgaccat caatgcggga tcgatgccgc catagacata tttggcggca ataaacgagc
     1081 tgctccagat aatcagggca aggatttggt aaaacatagt gagtgataaa gtcagatggt
     1141 catacaaaag tatag
//
LOCUS       DAWKOX010000255         1151 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.255, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000255 DAWKOX010000000
VERSION     DAWKOX010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1151
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.255"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..532
                     /locus_tag="WJK78_001989"
     CDS             <1..532
                     /locus_tag="WJK78_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ7598859.1"
                     /translation="DITFSEDVGECPLHSDSSFSENPESYLVMYVVKSANDGGNSLFL
                     SSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPASFDKKQGVRWGNILSVNTQMIRFRS
                     DCIYKGIEENRNKVSKEMVLALDYLVNVIKNASDIQEFSAQDDGLIIIDNVNGLHART
                     DYTDKNRHYIRARITV"
     gene            542..>1151
                     /locus_tag="WJK78_001990"
     CDS             542..>1151
                     /locus_tag="WJK78_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ7598860.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFIMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLIPPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEY"
BASE COUNT          379 a          167 c          227 g          378 t
ORIGIN      
        1 tgatataact ttctcggaag atgttggaga atgtccactt catagtgatt catcttttag
       61 tgaaaacccg gaaagttatt tggttatgta tgtagtaaaa tcagccaatg atggaggtaa
      121 ttccctattt ttaagttcat cagatattgt caatcagtta tctaaaacag aaaccggtaa
      181 aaaacactta aaaacattaa cgggcaattt atatccattt aaaacaccag catcatttga
      241 taaaaaacaa ggtgtgagat ggggtaatat cttatcggtc aatactcaaa tgattagatt
      301 tagaagtgat tgtatctata aaggtattga agaaaataga aataaagtat caaaggaaat
      361 ggtacttgca cttgattatc ttgtaaatgt tataaaaaat gcgagtgata ttcaagaatt
      421 ttctgcacaa gatgatggtt tgattattat tgacaatgtc aatggcttgc atgccagaac
      481 tgattatacg gataaaaaca ggcattatat tagagcaaga attactgtat aaaggacggt
      541 tatgcaagaa ataatgcaat ctatcgtttt tgttgctgcc gcaatactgc acggaattac
      601 aggcatggga tttccgatgc tcggtacaac cgcattggct tttatcatgc cattgtctaa
      661 ggttgttgcc ttggtggcat taccaagcct gttaatgagc ttgttggttc tatgcagcaa
      721 taacaaaaag ggtttttggc aagagattgt ttattattta aaaacctata aattgcttgc
      781 tatcggcagc gtcgttggca gcattttggg ggtaaagttg cttttgatac ctccagtgtc
      841 ttggctgctt ttactgatgg caatcattac attgtattat tctgtcaatg gtattttaaa
      901 tgtatgtgca aaagcaaaaa atattcaagt agttgccaat aataagaata tggttctttt
      961 tgggtttttg gcaggcatca tcggcggttc aaccaatgcc atgtctccca tattgttaat
     1021 atttttgctt agcgaaacag aaaataaaaa tcgtatcgta aaatcaagca atctatgcta
     1081 tcttttggcg aaaattgttc aaatatatat gctaagagac cagtattggt tattaaataa
     1141 gagtgaatac g
//
LOCUS       DAWKOX010000256         1105 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.256, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000256 DAWKOX010000000
VERSION     DAWKOX010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1105
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.256"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..327
                     /locus_tag="WJK78_001991"
     CDS             <1..327
                     /locus_tag="WJK78_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598861.1"
                     /translation="YIVPWWKKGENFRKLELITTGKNDNGNLTVNGIYGIQSFADSQL
                     GYTPELLVKSNNDILFKNNLQSVDVKPHSGNIHLDAKGKIQFNLNVPDVDGVQDVASE
                     KNTDKQ"
     gene            421..1105
                     /locus_tag="WJK78_001992"
                     /pseudo
     CDS             421..1105
                     /locus_tag="WJK78_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244588.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
BASE COUNT          383 a          229 c          217 g          276 t
ORIGIN      
        1 tatattgtgc cttggtggaa aaaaggtgaa aactttagaa aattagaact tattaccact
       61 ggtaaaaatg ataatggaaa tttaacggta aatggaattt acggcatcca atcttttgca
      121 gactctcaat tgggatatac gcctgaatta ttggtaaaaa gcaataatga tattctattt
      181 aaaaataatc tccaatctgt tgacgtgaag ccccattccg gaaatatcca tttggatgcc
      241 aaaggaaaaa ttcaatttaa tttgaatgtt cccgatgttg atggggtaca agatgtagcc
      301 agtgaaaaaa ataccgacaa acaatagtgc cttagttcgg tatgtcaaca ctatcagccc
      361 cccgatgaaa atgacaaagg cagcatatcc tttcattcaa aaacaggcaa tttgttcaat
      421 atgaacgtta aagttcataa agacacacac catttcggta ttcacaacct caacaatacc
      481 gatgttcatc tgactgccga agacagcgat aatgtgattg agattaaagg ggaactcgcc
      541 gaccctatgc cgacaggaaa tgttgagagt acaagttttt taaggggcat tgaaacggct
      601 tttaaatcca ataccgtatt aacggggaat aacaataaaa tatccatcgc cactgagggc
      661 aagggcttgg gattgggcgt aaatggtctc cagtccaact ccccctattc cggacacacg
      721 acgggcattt tcatcaataa tcaatcaagc gaccttaccc aaccttccct tgatggcatc
      781 agcaccatca aactcaaagc cgtcaaggga aataatgaag ttgatttaaa tgtaaaaaac
      841 cacgcctccg taaaaggcat tatcgcgtcg cattctgcaa aagcaacgct tgaagccgaa
      901 ggggacaata ttgtccaggt taaaaatccg gacaccaata cggctttaat cgatgctttg
      961 aaaaaacaat accccaatgc ttcgaaagaa ctatacaggg tgggggttca atccacgact
     1021 ggaacagtac gcatttcgcc aaacggcaaa atcgcattaa cggaattgaa aacttttgga
     1081 attgtacaaa acggcatttg cgtca
//
LOCUS       DAWKOX010000257         1047 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.257, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000257 DAWKOX010000000
VERSION     DAWKOX010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1047)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1047)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1047
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.257"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(121..549)
                     /locus_tag="WJK78_001993"
     CDS             complement(121..549)
                     /locus_tag="WJK78_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ7598862.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(530..964)
                     /locus_tag="WJK78_001994"
     CDS             complement(530..964)
                     /locus_tag="WJK78_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HEZ7598863.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          269 a          316 c          189 g          273 t
ORIGIN      
        1 ttgaaaaccc cattaaaccg tctttaaccc atcgtcccga acggtagatg tttcacccct
       61 gcaaaccaaa aaaaagaccg tctgaataca gacggccaaa gcctggtcac acatcactgc
      121 ctaaaataaa gctgcctgct gtgccgcagg tcggctcatt tcattgataa tcgtatatcc
      181 cgttcgtgaa gagatgccgt atttagggca tagcttcgtc atcgccataa gcccgctctc
      241 cttatcaata tcgcgcaatt tgacaaactc ctgataaaac ctatggtttc tcaactgtat
      301 taacgccttg ccgcaccgtg ggacatacaa ttcctcgcca ccatatacct gcaacagctc
      361 atgtgttttc acttcgccga tggcttcgac caaaattgcc aaacgctcgg tgtccacctt
      421 gcccttacca aatttaaacc gcgccccgcc aatcgccttg accagctgtt ccgtcgctgc
      481 cagtccgatg acatccacaa tgtccaacac ggtatccggc aataaatgtt caactttttc
      541 gaaccccatc atccccaccc gctttttccg ttttcctgtt ttccgcaatc tgcaacgcag
      601 caaccagttt atgtagctgc gtatcgtcta aatattcgac cttatcctta ccaaacatcc
      661 gccgcgccat tgcgtgtgca tagttccaat gtttgccgcc gacggtcagc agggcttcga
      721 ctttgtccaa cattgccgct gatgatgtcc gacgcagatg tggtttaccg tgtgggttac
      781 cttttgcttt aggcttaaat ccgtgcgacc gcatatcagc gacaacagac tcaagttcgg
      841 aaacatccat atccgcacac gaccgcttgc ccgtcacgcg ctccaacacc gcgcgatagg
      901 taccgtcgtc caagcccagc tccttttggg caattttaat ttttgcaatc aacgcccggc
      961 gcatctcaaa cccataaaac acaatatatt gactaattaa cgcatattat accaataaaa
     1021 tacaatatat agtattaagc cgatgtt
//
LOCUS       DAWKOX010000258         1022 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.258, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000258 DAWKOX010000000
VERSION     DAWKOX010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.258"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            35..964
                     /locus_tag="WJK78_001995"
     CDS             35..964
                     /locus_tag="WJK78_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ7598864.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAEWDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
BASE COUNT          244 a          307 c          238 g          233 t
ORIGIN      
        1 atatgcgccg gttcaatatg ccgtctgaag ccccatggat tccattatcg aactgcgcca
       61 cctcaagacc ctgctggcac ttgaagaaac cggcagcgtc tcccttgccg ccaaacgggt
      121 tttccttacc caatccgctc tttcccacca gatccgtatg ctcgaaaacc actacggcac
      181 gccgctgttc gaacgcaaat ccacgccctt gcgctttacc ccggtgggcg aaaggctgct
      241 gcgcctcgcc cacgaactta tacctcaagt tgctgttgca gaatgggatt tggcgcgaat
      301 cacggaagga gaggcgggag agctgcggat tgccgtcgaa tgccatacct gtttcgactg
      361 gctgatgccc gccatgggcg aattccgccc gatgtggccc caagtcgaat tggatatcgt
      421 atcgggattc caagcggatc ccgtcggact gctgctgcaa caccgtgccg accttgccat
      481 tgtttccgaa gcggaaaaac aaaacgatat ttctttccaa ccgctgtttg cctacgaaat
      541 ggtcggcatt tgcgcaccag accatccgct tgccgccaaa aacgtttgga cggcggaaga
      601 ctttatcggg gaaaccctga ttacttatcc cgttcccgac gagatgctgg atttgcccaa
      661 aaaaatcctg attccgaaaa acatcaaccc gccgcgccga cacagcgaac tgaccatcgc
      721 cattatccaa ctggttgcca gcagacgtgg cattgccgcc cttccctatt ggacagtcat
      781 gccctacctt gaaaaaggct atgtcgtcca ccgccaaatt actgccgacg gattgcaaag
      841 caaactgtat gccgccatcc gtaccgaaga tacggacaag agctatctga acaatttttg
      901 ccaaatcata cgcgaacgcg gttttgcaga tttgcccgga ctgagcgaat tggaaccggt
      961 ctgacccctt attcaaccat acccggcagt ttttctattt tttcatgtat agtggattaa
     1021 ca
//
LOCUS       DAWKOX010000259         1006 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.259, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000259 DAWKOX010000000
VERSION     DAWKOX010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.259"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>1006
                     /locus_tag="WJK78_001996"
     CDS             <1..>1006
                     /locus_tag="WJK78_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ7598865.1"
                     /translation="KYRQSGLDIYAWHGMYFFPRFPFIDIDRIRWVRVGLKAFKHYIR
                     ENGLPDLIHAHRMNYAGILAQKISQKYGIPYVVTKHSSTITRGLIRPHQWQPMKNAAA
                     HAAARLAISRHFAHVLQHKYGCEWQYLPNILGGIFNRPFEQREKNNKPHFVFCTVSHL
                     RRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQRLKQQAADLGITHAVTFLGALQP
                     EAVLDLMKNSDAFVLASRTETFGVVYIEALSQGLPVIATRCGGAESIVSDGNGYLVPV
                     DDDDALADALIKMYEHHSDFEPARLRENCLNEFGENAVIGRLIGIFRQAIAEYGKKIP
                     V"
BASE COUNT          257 a          301 c          240 g          208 t
ORIGIN      
        1 aaaatatcgg caaagcggtt tggacatcta tgcatggcac ggcatgtatt tcttcccccg
       61 ctttccgttc atcgacatcg accgcatccg ctgggtgcgc gtgggtttga aagccttcaa
      121 acactacatc cgcgaaaacg ggctgcccga cctgattcac gcccaccgca tgaactatgc
      181 cggcatactc gcccaaaaaa tttcccaaaa atacggcatc ccctatgtcg tcacgaaaca
      241 cagcagcacc attacgcgcg gtctgatccg tccccaccaa tggcagccta tgaaaaatgc
      301 ggcggcgcac gccgccgcac gtctcgccat cagccgccat ttcgcacacg tcctgcaaca
      361 caaatacggc tgcgaatggc agtacctccc caacatactg ggcggaatat tcaaccgacc
      421 gtttgaacaa agagaaaaaa acaacaaacc gcatttcgtg ttctgcaccg tctcgcacct
      481 tcgccgtctc aaaggacacg atgtcctgct cactgccttt gcccgggcgt tggcacaatg
      541 cccgcaactg cgtctaaaca tcggcggcag cggacaggaa gaacagcggc tgaaacagca
      601 ggcggcagac ttgggcatta cccatgccgt tacatttttg ggcgcactgc aacccgaagc
      661 agtcttggat ttgatgaaga acagcgacgc atttgtcctt gccagccgca ccgaaacctt
      721 cggcgtggtc tatatcgaag cactgtccca aggattgccc gtcattgcaa cacgctgcgg
      781 cggtgcggaa tctattgttt cagacggcaa cggatatttg gttcctgttg acgacgacga
      841 tgcccttgcc gacgcactca tcaaaatgta tgaacaccac tctgatttcg aacctgcccg
      901 acttagggaa aactgtctga acgaatttgg cgaaaatgcc gttataggca ggttgatcgg
      961 cattttccga caggcaatcg cagaatacgg taagaaaata ccggtg
//
LOCUS       DAWKOX010000260          981 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.260, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000260 DAWKOX010000000
VERSION     DAWKOX010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.260"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(88..720)
                     /gene="mtrR"
                     /locus_tag="WJK78_001997"
     CDS             complement(88..720)
                     /gene="mtrR"
                     /locus_tag="WJK78_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HEZ7598866.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          234 a          216 c          255 g          276 t
ORIGIN      
        1 atgtattttt agaagaaggc tttgtgtcat tttgatgccg tctgaaaggg tttgttcgtt
       61 tcagacggca ttgctaccaa ggcttgatta tttccggcgc aggtcgggat ggttttccaa
      121 gttgtccatc attatcccga tgatgcgcgg ggcggttttg cccaaatcga aacgttcgca
      181 ggaagagaac caccgccaaa tcagcccgtc caaggttgat ttgatgaaga taactgccgt
      241 ttccttgtcc aaatcgtcag ccaaatcctg attttccacc gcttcggtca aaacggcggt
      301 aattttctcg cgccagattg cctgatgctt gcgggcaatg gcgataacgg cggcgttttg
      361 ctccgtgtgt tcgcatttta aaaacaggat gttgtggaat ttgtagtaga tgtcgttgct
      421 ttgcagccgc tcgaaaaagt gcagcagcgt gtggcggaat accgcccaag accctccttc
      481 ggcatcttcg gcatcttgcg cgatgcagtt ttcgatgtcg tcgcagatac gttggaacag
      541 cgcgtcgaac aagtcttcct tatttttgaa atgccaatag agcgcgccgc gcgttacgcc
      601 ggcggcttgg gcgatttcgt tgagcgaggt gcgcgcaatc cctttgcggt aaaaggtttc
      661 caaggcggca agcatcaggt gttctttggt tttcaaggct tcggttttgg tttttctcat
      721 aatggcgttt tcgtttcggg tcggtttgat gagggcggat tataaaaaag actttgtaac
      781 catgcaatcg tgtatgtata atgaaaccca tgaaattgag actacatctc aactttgaaa
      841 acaggcataa cctgctttgc aacccgttcg aacattcggg tatcaaagca ggcggttttt
      901 atatcctgaa atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt
      961 acaaatagta cggaaccgat t
//
LOCUS       DAWKOX010000261          978 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.261, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000261 DAWKOX010000000
VERSION     DAWKOX010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.261"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            9..>978
                     /locus_tag="WJK78_001998"
     CDS             9..>978
                     /locus_tag="WJK78_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HEZ7598867.1"
                     /translation="MLEKQHFPRFVIGESLLPHCMEMLEEAGFADAVRAEPGFQLKNG
                     AAFSWGSRYTEFDFTDKFSDGPGTTYQVRRAVFDKILIEEAAKQGVEVRFGHGVTAFD
                     NSGDFVRLNIETDTGKRYELTAKFVLDASGYGRVLPRLLNLETPSHLPPRQAHFTHID
                     DNITNPKFDRNKILITTYPQHRDVWIWLIPFGDNRCSVGVVGTPDKLAGESETVLKKF
                     VYECPMLNEILDKAVWENDFPFRSIQGYSANVKSLHGRHFALLGNAAEFLDPVFSSGV
                     TIALHSAKLAADLLAKQLKGEAADWQTEFAEPLMIGVDAFRTYSGLN"
BASE COUNT          230 a          290 c          253 g          205 t
ORIGIN      
        1 aagtctgcgt gttggaaaaa cagcactttc cgcgcttcgt catcggcgaa agcctgctgc
       61 cgcactgtat ggaaatgctg gaagaagccg gatttgccga tgccgtgcgc gccgagcccg
      121 gctttcagtt gaaaaacggc gcggcgtttt cgtggggcag ccgttatacc gaattcgatt
      181 tcaccgataa attttcagac ggccccggca cgacttatca agtgcgccgc gccgtgttcg
      241 ataaaatcct gattgaagaa gccgccaaac aaggcgttga agtacgtttc gggcacggcg
      301 taaccgcgtt cgacaacagc ggcgattttg tccgcctgaa catcgaaacc gacaccggca
      361 agcgctatga actgaccgcg aaattcgtct tggacgcaag cggttacgga cgcgtgctgc
      421 cgcgcctgct aaacttggaa acgccctcgc acctgccgcc gcgccaagcg catttcacgc
      481 acatcgacga caacatcacc aacccgaaat tcgaccgcaa caaaatcctg attaccacct
      541 atccgcaaca ccgcgacgtg tggatttggc tgattccctt cggcgacaac cgctgttccg
      601 tcggcgtggt cggcacgccc gacaaacttg ccggcgaatc ggaaacagtg ttgaaaaaat
      661 ttgtttacga atgcccgatg ctgaacgaaa ttttggacaa agccgtttgg gaaaacgatt
      721 ttccgttccg ctccatccaa ggctattccg ccaatgtgaa atcgctgcac ggcaggcatt
      781 tcgcgctatt gggcaatgcc gccgagttcc tcgatcccgt gttctcgtcg ggcgtaacca
      841 tcgcgctgca ctccgccaaa cttgccgccg atctgttggc aaaacaactc aaaggcgaag
      901 ccgccgattg gcaaaccgaa tttgccgaac ccttgatgat cggcgtggac gcgttccgca
      961 cctatagtgg attaaatt
//
LOCUS       DAWKOX010000262          954 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.262, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000262 DAWKOX010000000
VERSION     DAWKOX010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.262"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..949
                     /locus_tag="WJK78_001999"
     CDS             <1..949
                     /locus_tag="WJK78_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS30-like element IS1655 family transposase"
                     /protein_id="HEZ7598868.1"
                     /translation="TQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQ
                     YSAEKAQRQSRTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCKHHQITLHH
                     STIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKS
                     RIGDWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARAAVRALKAHKDRV
                     HTITMDNGKEFYQHTKITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRN
                     ISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLIH"
BASE COUNT          306 a          292 c          198 g          158 t
ORIGIN      
        1 gacccaaggc gaacgatacc acatccaata cctgtcccgc cactgcaccg tcaccgaaat
       61 cgccaaacag ctgaaccgcc acaaaagcac catcagccgc gaaatcagac ggcaccgcac
      121 ccaagggcag caatacagcg ccgaaaaagc ccagcggcaa agccggacta tcaaacagcg
      181 taagcgacaa ccctataagc tcgattcgca gctgattcag cacatcgaca cccttatccg
      241 ccgcaaactc agtcccgaac aagtatgcgc ctacctgtgc aaacaccacc agatcacgct
      301 ccaccacagc accatttacc gctaccttcg ccaagacaaa agcaacggca gcacgttgtg
      361 gcaacatctc agaatatgca gcaaacccta ccgcaaacgc tacggcagca catggaccag
      421 aggcaaagtc cccaaccgtg tcggcataga aaaccgaccc gctatcgtcg accagaaatc
      481 ccgtatcggc gattgggaag ccgacaccat tgtcggcaaa ggacagaaaa gcgcattatt
      541 gaccttggtc gaacgcgtta cccgctacac catcatctgc aaattggata gcctcaaagc
      601 cgaagacact gcccgggcag ctgttagggc attaaaggca cataaagaca gggtgcacac
      661 cattaccatg gataacggca aagagttcta ccaacacacc aaaataacca aagcattgaa
      721 agcggagact tatttttgtc gcccttacca ttcttgggag aaagggctga atgagaacac
      781 caacggactc atccggcaat acttccccaa acaaaccgat ttccgtaaca tcagtgatcg
      841 ggagatacgc agggttcaag atgagttgaa ccaccgacca agaaaaacac ttggctacga
      901 aacgccaagt gttttattct tgaatctgtt ccaaccacta atacactagt gttg
//
LOCUS       DAWKOX010000263          898 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.263, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000263 DAWKOX010000000
VERSION     DAWKOX010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..898
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.263"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            29..>898
                     /locus_tag="WJK78_002000"
     CDS             29..>898
                     /locus_tag="WJK78_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ7598869.1"
                     /translation="MNGQQLPEVKWGNSYNQLTHKNNTRQATFHSYFQGARKKTTFSF
                     NNTDEVVAQKGDTVVFGAATYLPPYGKVSGFDERKLKERTNALNWINTTRPGLVGYHY
                     QDSTCSSGNCPELSYKTQFTFGHSSLAKKTNGGKLDIYEDKSRDGSPIYKLQGYSWLG
                     VSFNLSGESTAESKKLKNLVSSFSEEVTQNNGADSQHKDKNLVYTTGDGRNNNKTHQD
                     KHHAVAFYLNAKLHLLDKQQIKNITQGSELNLGVLKTRIEPTDAWKNKRHLVINADWE
                     FKDTGIVSVKLKLP"
BASE COUNT          291 a          209 c          197 g          201 t
ORIGIN      
        1 agcgcaaacg tattcatacg ctcttgtaat gaacggacaa cagctgcctg aggtaaagtg
       61 ggggaattca tataatcaat tgacgcacaa aaacaatacc cgccaagcta cctttcattc
      121 atattttcag ggagctagaa aaaaaactac tttctcattc aataataccg atgaagttgt
      181 tgctcaaaaa ggcgatactg tcgttttcgg cgcggcgacc tacctgccgc cctacggcaa
      241 ggtttccggt tttgatgaaa gaaagctgaa agagcgcacc aatgccctta attggattaa
      301 tacgactcgc ccggggttgg taggctacca ctaccaagat agcacatgct ccagcggaaa
      361 ctgtcctgaa cttagctata aaacccaatt taccttcggt cattccagtt tggcaaaaaa
      421 gacaaacggc ggcaagctgg atatatacga agacaaaagc cgcgacggtt cgcccattta
      481 caaattgcaa ggttattctt ggttgggcgt gtctttcaat ttgagcggcg aaagcaccgc
      541 cgaatcaaag aaactcaaga acttggtatc ttcttttagc gaggaagtaa cgcagaacaa
      601 tggtgcggac agccaacaca aagacaaaaa cctcgtctat acgacaggcg atggccgtaa
      661 taataataaa acccatcagg acaaacacca cgccgtcgcc ttttatctga acgccaaact
      721 gcacctgctg gataaacaac aaatcaaaaa tatcacgcaa ggcagtgaac ttaatttggg
      781 tgtcttgaaa acgcgcatcg agccgacgga cgcgtggaag aataagagac atctcgttat
      841 taatgctgat tgggagttta aagataccgg aatagtcagc gtcaaactca aattgccg
//
LOCUS       DAWKOX010000264          897 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.264, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000264 DAWKOX010000000
VERSION     DAWKOX010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.264"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(165..599)
                     /locus_tag="WJK78_002001"
     CDS             complement(165..599)
                     /locus_tag="WJK78_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598870.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQPYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
BASE COUNT          322 a          158 c          101 g          316 t
ORIGIN      
        1 cgcctgccgt tgccaaagtc ggcccatcat atttaatacc tgattgaaag ttgctttgga
       61 ttgtttttgc aaactcatcc gcagaaaatt ttttgcattg tttagtatca ccactaccaa
      121 tcattgttat tctccttgag tttaagtcaa acaaaaaatg aaattcaaat actctctctt
      181 aacttattga gatcaatcat caatataaat aaaaaatata aactaccaga ataaccaaag
      241 ccacgaaaaa ttttttccaa tatttcacta tttaaacaaa aagcaccgca tacccacgtt
      301 gatgattccg aaataaaaca catccatatt tccattaccg ccaaccatga cactactatc
      361 ctaatcaaaa atactttttt atctgcccaa gcacttttta tatttaacaa tacaatatga
      421 ttttgtaatt taaaatctaa gctttgcatt tttctaacca gtgcaaacaa acaaccaagc
      481 gcaataaaaa aagattggta gggctggtaa aaaggtagaa atagaatatt taagaccaat
      541 ggatagatcc acatatacct atttgttaaa ttattaataa attctttttt gttatccata
      601 aaatttccat aaaatattgc gatgatattg cactgagttt attagcaaac aacgtaaaga
      661 aaatatttat tatgataagt gttttttaag tttcattttc aaatgatggc gcgtaataaa
      721 aagtttcaca aatccgtttt tcagactatc taagtatcta ttttacaatc tatttcaata
      781 atcattatgt cttaacaact cttcttggca ttatagatgc tcactcatat catttaatga
      841 tactcttgat taatctttat gtgatttagc gaaattaaaa tttctctttt ttgtttg
//
LOCUS       DAWKOX010000265          889 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.265, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000265 DAWKOX010000000
VERSION     DAWKOX010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..889
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.265"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            221..>889
                     /locus_tag="WJK78_002002"
     CDS             221..>889
                     /locus_tag="WJK78_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ7598871.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          254 a          196 c          203 g          236 t
ORIGIN      
        1 aacggatgaa atcaaccgat attcaaacac agtcattttt agcgcatttt cagcgtatcg
       61 ttaatgcgga aaatttcgtg aacaggtttt ttgcacaggt ctccgcctcg tttcgcggga
      121 tgggaaaccg tattagaaaa cggacgcacg caacataaac cccgaaagtg atgataagat
      181 gatgatttaa cgtactgctt taattattta aggaattatc gtgtttcccg acaaatacaa
      241 gttgagtttg gaagaaaata tttttctggc aaagaaagta ttggttgccc aaattcacaa
      301 cctcagccgt tttgagaatt gtcagacgac cttgttgcag accgaacaaa ttatccatgg
      361 caaaaatgta gcctccgcgt cactggaaga catccaaacc atcttgaacc tgaaacgtgc
      421 ctatcaatat gtgatttcgc atatttcaaa cggcgaaccg gtcgatattt cactccttaa
      481 aaaaatcaac aacattgttg ccaaggacga ttctttggca cccggtgatt tccgtaccgg
      541 ttcggtcggc gtaacgctat tggacggttc ccgtcatgcc ccaaatccgg tgaaggaaat
      601 tgaagtggct cgcgtgttac aaaatatcgg actgcaaagc ggttcgacga cggaggcagc
      661 cgtccgtttt atgctttatt gtatgcggca gcaggttttt tgggacggca acaaacgaac
      721 ggcaacctta tttgccaacg gtctgatgat ggcggggggc tgcggcatct tggaaatctc
      781 cgaaatgcag atgccgcaat tcaatgaaaa actgtccgca ttctatcgct ccggcgacga
      841 taccgatatt tccaagtttg tgtatcaaaa ttgtatatcg ggcatagac
//
LOCUS       DAWKOX010000266          888 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.266, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000266 DAWKOX010000000
VERSION     DAWKOX010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.266"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            366..665
                     /locus_tag="WJK78_002003"
     CDS             366..665
                     /locus_tag="WJK78_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ7598872.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFLFAVLTVLKLKGYQAGLYTLLIALAVAAFGFGMPAGMAVSSLPPQPH"
     gene            605..841
                     /locus_tag="WJK78_002004"
     CDS             605..841
                     /locus_tag="WJK78_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ7598873.1"
                     /translation="MRLRDAGGYGGFFPAAAAALTQRPYATLDLTAHYKIGKSTRIGL
                     DFENVFNKRYRPMPDIHVYGTPRSLTATVKHIVD"
BASE COUNT          247 a          238 c          192 g          211 t
ORIGIN      
        1 ccgtactggt ttttgttcat ccactataca tcaaacatca aattggactg accaatcagg
       61 gcggattcta atgacacgcc gttcccgccg tcaacggcat ttacctcgca ccgcccccga
      121 aacacaggaa aaaactacac caaactacaa tttttgttta tgcaaatatt tgttttgaca
      181 ggatttaaac gaaagctccg attcaaatct gccgaaccgc ccaaaaatat atagtggatt
      241 aacaaaaatc aggacaaggc gacgaagccg cagacagtac agatagtacg gtaaggcgag
      301 gcaacgccgt actggtttaa atttaatcca ctctattgac ctgaatatta aagtttcgca
      361 aagtaatgca acgttgcttt aattggtttg accactattg ccgacgatta gaaaaatatt
      421 ttcggagatg ttcaattatg gaaacttggg ttcaaaacta cacggcaatc ggcggcagcc
      481 tgtatctgac tgccgccgcc gcactcttac ccatcgtctt tttatttgcc gtgctgaccg
      541 tcctgaagct gaaaggctat caggcggggc tttatacgct gctgattgcg cttgccgttg
      601 ccgcattcgg cttcgggatg ccggcgggta tggcggtttc ttccctgccg ccgcagccgc
      661 actgacccaa cgcccctacg ccacgctgga tttgaccgcg cattacaaaa tcggcaaatc
      721 cacccgcatc ggtttggact ttgaaaacgt gttcaacaaa cgctaccgcc ctatgcccga
      781 cattcacgtt tacggcacgc cgcgcagcct gaccgcaacc gttaaacata tagtggatta
      841 acaaaaatca ggacaaggcg acgaagccgc agacagtaca aatagtac
//
LOCUS       DAWKOX010000267          883 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.267, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000267 DAWKOX010000000
VERSION     DAWKOX010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.267"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(38..817)
                     /locus_tag="WJK78_002005"
     CDS             complement(38..817)
                     /locus_tag="WJK78_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ7598874.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          212 a          285 c          176 g          210 t
ORIGIN      
        1 cgatacatcc gaatatgcca gaccgtctaa acggtattca tacctcccaa tcctgcacgc
       61 gcttcaaatc gttttgcgcc aaagtatccg cgtggcggtt acggctctga tattccctgt
      121 ctttcatgat gctgcttgcc acataattca aatgtgcctt tgccgcctcc gaagcctcgc
      181 ccggccgacg gttcgatatc gcctcataca gcacgcggtg ctgcgccatc agtttcggac
      241 gcggatcttc ttcctgattc agataaataa ggctgctgcg cgtctgccgg tacagcattt
      301 tcaacaaacc gcccgacaaa tggctgaaca acaaattgtg cgccgcatcc gcaatcgtct
      361 gatggaagct gacatcggct tcgctctgat gttccagatt gccgctttcg cacgcctcct
      421 caaacttttc aagccaaaac ccaatccgct tcaaatcggc atccgtccgg cgttctgccg
      481 ccaatgccgc catacagccc tcgatgtggc agctgaaatc aaaaacatcc tgttcccaat
      541 tggaatgctt gcccaaaagc tcctgccaac tttgcaaaaa atcctgctgt ggcttgaccg
      601 aaacataata accgtctccc tgcctcgctt ccaaaacctg acgggcaacc aaaacattca
      661 atgccgacct gaccgacggg cgggacacgc cgaactcttc cgccaaaacg cgttcgggcg
      721 gaatcttgcc cccttccgcg taaacccctt ccgcaatgcg ctcctccaat accgacaata
      781 cctgatcgct gattttctga ggccttacca gtttcattac tcctccttta taaagattcc
      841 ctgcagaacc cttccgaaat atagtggatt aacaaaaatc agg
//
LOCUS       DAWKOX010000268          737 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.268, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000268 DAWKOX010000000
VERSION     DAWKOX010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..737
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.268"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            141..575
                     /locus_tag="WJK78_002006"
     CDS             141..575
                     /locus_tag="WJK78_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ7598875.1"
                     /translation="MNFALSVIMLTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(623..>737)
                     /locus_tag="WJK78_002007"
     CDS             complement(623..>737)
                     /locus_tag="WJK78_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ7598876.1"
                     /translation="SSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
BASE COUNT          219 a          209 c          173 g          136 t
ORIGIN      
        1 tttgggaatc tgttttaccc caatatataa agcaccatat taaggcggag tgtcttcccc
       61 actttgaccc gaacccggaa aagacaccgc ccaagccaat cctgatgctg ccccgacagc
      121 caaccattaa ggaaatccta atgaactttg ctttatccgt cattatgttg accctcgcct
      181 ctttcctgcc cgtcccgcct gccggagccg ccgtctttac ttggaaggac ggcggcggca
      241 acagctattc ggatgtaccg aaacagcttc atcccgacca aagccaaatc ttaaacctgc
      301 ggacgcgcca aaccaaaccg gcggtcaaac ccgcccaagc cgacgcaggg aagcgcacag
      361 acggcgcggc acaggaaaac aatcccgaca ctgccgagaa aaaccggcag cttgaggaag
      421 aaaagaaaag aattgccgaa accgaacggc agaacaaaga agaaaactgc cggatttcaa
      481 aaatgaacct gaaggcggtg ggaaattcaa atgcaaaaaa caaggatgat ttgattcgga
      541 aatacaataa cgccgtaaac aaatactgcc gttaatcggc tctagcgcaa acccgatgcc
      601 gtctgaagcg gcacggggtt tgtcatttct gccagtaggt tttgacgttg acgaactcgt
      661 acagcccgaa ttcggacaat tcgcgcccgt aaccggaatc tttgactccg ccgaaaggca
      721 ggcgcaaatc gctgctg
//
LOCUS       DAWKOX010000269          735 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.269, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000269 DAWKOX010000000
VERSION     DAWKOX010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.269"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(53..619)
                     /locus_tag="WJK78_002008"
     CDS             complement(53..619)
                     /locus_tag="WJK78_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ7598877.1"
                     /translation="MGFYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMLREGLSGGADDVREAKRES
                     WWLTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAVIGMATTVMVTVGLTAGRALGVLF
                     GKRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          219 a          253 c          147 g          116 t
ORIGIN      
        1 aaggcgaggc aacgacgtac tggtttttgt taatccacta tattttccga catcattgaa
       61 tcaaacccaa atgcgacaag agcgtccatg taccgatggc aatcaacacc aaacctccgg
      121 caaactcggc gcgtttgccg aacaatacgc ccaaagccct tcccgccgtc agcccgaccg
      181 taaccatcac cgtcgtcgcc atgccgatga cggcggcggc aaaggcgatg tttacctcca
      241 taaacgccaa gcccaccccg actatcatgg aatcaatact ggttccaaaa gcagtcagaa
      301 ccgtcaacca ccagctttcc cgtttggctt cgcgcacatc gtccgccccg ccggacaagc
      361 cctcacgcaa catcttcaga cccagcccgc ccagcaggac gaaagccgcc caatggtccc
      421 attcgctgat aaacggcttg gcataaaaac cgcccaccca gcctgccagc ggcgtgagcg
      481 cttcaaccgt gccgaacacc aaagccgttg ccgcaatttt gcgcggaggc attctgaccg
      541 ccgcaccctt tgccaatgcg acggcaaacg catccatcga catccccagc gcaatcaaga
      601 gcaaagcata aaaacccata ccgcacccgt cctcaaaaag ggcggattat agcaaaagca
      661 aaaaaatgca aaaacgccgc acgaaaaccc acatcccgtc attcccgcaa aaacaaaaaa
      721 tcaaaaacag aaatc
//
LOCUS       DAWKOX010000270          729 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.270, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000270 DAWKOX010000000
VERSION     DAWKOX010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 729)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 729)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..729
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.270"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>729
                     /locus_tag="WJK78_002009"
     CDS             <1..>729
                     /locus_tag="WJK78_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ7598878.1"
                     /translation="IIDEYLKDAYGGNGLKEAQRNLVAKEIADRIEAELHRQRANYQA
                     QEAAKYSPAHGGVEKSMYKHHADLQKTNTNIANRYSASANEYAAQAKSLGSLPKSVGY
                     AALKNLGNALAALQMGEALYSNKANNIAKTGSSILGGMLAVAAAGAIASLAGVTLPFW
                     ASIAVGASIGLGISAAWDAFGVGEKLGLDPNVPAFDPFFGWLYDKTGGWEGGIPDWAK
                     EWLGLNRDGKYHQYDPLTLDLDGDG"
BASE COUNT          226 a          121 c          184 g          198 t
ORIGIN      
        1 tataatagat gaatacttaa aggatgctta tggcggaaat gggttaaaag aagcgcaacg
       61 caatcttgta gctaaagaga ttgcggatag aatagaggca gagttgcata ggcagcgtgc
      121 taattatcaa gcacaagaag ctgcaaaata ttctcctgcg catggcggag tggagaaaag
      181 tatgtacaag catcatgctg atcttcaaaa aacaaatact aatattgcta atcgttattc
      241 tgcaagtgct aatgaatatg cggctcaagc aaaatcatta ggaagtttgc caaaatcagt
      301 tggctatgct gcactaaaaa atttgggaaa tgctttggcg gcgttgcaaa tgggagaagc
      361 tctatactca aataaagcta ataatatagc caaaacaggc tcttctattt taggtggtat
      421 gttagcggtt gcagcagcag gtgctatagc tagtttagca ggagttacat tgcctttttg
      481 ggcttctatt gcagttggtg catctattgg tttaggtatt agtgcagcat gggatgcttt
      541 tggtgttggg gaaaaattag gattagaccc taatgtgcca gcttttgatc cattcttcgg
      601 ttggctatac gataaaacag gcggctggga aggaggtatt cctgattggg ctaaagaatg
      661 gttgggatta aaccgcgatg gcaaatacca ccaatacgac ccactaaccc tagacttaga
      721 cggagacgg
//
LOCUS       DAWKOX010000271          725 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.271, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000271 DAWKOX010000000
VERSION     DAWKOX010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.271"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>725
                     /locus_tag="WJK78_002010"
     CDS             <1..>725
                     /locus_tag="WJK78_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ7598879.1"
                     /translation="IDIKSGGSIDAYATVFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSHKKRKFLGITYDKVHDTSTQQMQTALPSRVVAESANLQSGWDTKLQGTQFETTLGG
                     AVIRAGVGDQARADAKIILEGIKSSIHTETVSSSKSALWQKQAGRGSNIETLQLPSFT
                     GPVAPVLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNINWNQVQLAYDK
                     WDYKQEGLTGAGAAIIALAVTVVT"
BASE COUNT          217 a          202 c          174 g          132 t
ORIGIN      
        1 atcgacatca aatctggtgg cagcatcgac gcctacgcca ccgtattcga tgcccccaaa
       61 ggcagcatta acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac
      121 tacgacaaac tagacagtca taagaaacgc aaatttctcg gcattactta tgataaggta
      181 catgatacct ctacccaaca gatgcaaact gccttaccaa gccgtgtagt ggctgaatca
      241 gctaatctgc aatcaggttg ggataccaag ttacaaggta cgcagtttga aaccacgctg
      301 ggcggcgcgg tcatccgtgc aggcgtaggc gaccaggcac gggccgatgc caagattatc
      361 ctcgaaggga tcaaaagcag catccacaca gaaaccgtaa gcagcagcaa atccgccctc
      421 tggcaaaaac aggcaggacg cggcagcaac atcgaaaccc tgcaactgcc aagtttcacc
      481 ggccccgttg cgcccgtact ctctgctccc ggcggctaca tcgtcgacat tccgaaaggc
      541 aatctgaaaa ccgaaatcga aaaactcgcc aagcagcccg agtatgctta tttgaaacaa
      601 cttcaagtag cgaaaaacat caactggaat caggtgcagc ttgcttacga taaatgggac
      661 tacaaacagg agggcttaac cggagcaggt gcggcgatta tcgcactggc cgttaccgtg
      721 gtcac
//
LOCUS       DAWKOX010000272          709 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.272, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000272 DAWKOX010000000
VERSION     DAWKOX010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.272"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(142..264)
                     /locus_tag="WJK78_002011"
                     /pseudo
     CDS             complement(142..264)
                     /locus_tag="WJK78_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          155 a          134 c          206 g          214 t
ORIGIN      
        1 gcccggatgc ctgattatgg ggcgtccggg gaggattaag ggggcatttg ggtaaaatca
       61 ggagtaatta ggagcggaaa tagacgaaaa cctgtgtttg ggtttcggct gttgggaggg
      121 aaaggaattt tgcaaaggtc tctttccttt gattttagag gaggatgcca cgtcggcatc
      181 actgttgccg ccgggccatt tgccgtgatt caggtaatac tcggtgacgg ctgatttttg
      241 accttcagcc aaaagaatgg cttcgtcatt cccgcgcagg cgggaatcca ggtctgtcgg
      301 tgcagaaact tatcgggaaa acggtttctt gagattttac gttctggatt cccactttcg
      361 tgggaatgac gggatttaag tttcaaaatt tattctaaat aactgaaact caacgaacta
      421 gattcccgct tttgcgggaa tgccgaattt taggtttctt attttggttt tctgtccttg
      481 tgggaatgat gaaattttaa gttttaagaa tttatcggaa aaaacagaaa ccgctccgcc
      541 gtcattcccg cgcaggcggg aatctagcct cgtcggtgcg gaaacttatc gggtaaaaag
      601 gtttctctag tttggtgtcg attttcttgt cggtgctgtt gacggcaggt gcttggtgtc
      661 gatttcgttg ccggtgactt tgttaacggc gtcggcgctg gcgttgggg
//
LOCUS       DAWKOX010000273          677 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.273, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000273 DAWKOX010000000
VERSION     DAWKOX010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.273"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(91..642)
                     /locus_tag="WJK78_002012"
     CDS             complement(91..642)
                     /locus_tag="WJK78_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598880.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDLEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKSGGAGKADG"
BASE COUNT          189 a          271 c          125 g           92 t
ORIGIN      
        1 caaagaaacc gccattagca ctacaccccc ccaagctgcg gctgccaaac acatcggctg
       61 cttctcgacg cacccgctga aaaatgcgtc ctatccgtcc gccttgcccg caccccctga
      121 ctttgccgcc ctgcccgatg ccgtctgaag cctgaaccgc cccaccagcc cgatgacgca
      181 cgacaccgcc ggaaagggca tacacaaagc cgtcagcaca taacgcgcat tccccgtatt
      241 gaccacgtcc gcgcccttca gcagcagcgg tagcgcgttc gcccactccc acaccgacgg
      301 cgcgctgaac gccaataccg ccaccagccc caacatccgg aacaccccga tttccaacac
      361 ctgccgccgc cgcaccgaac ggttgagcaa aaacacaacc gccaacccga aacagaccac
      421 cgccgccata ccgccgttgg cgacaatctg caaactgttg aatgcaatat cgggcgtaac
      481 cgccaacacg ccttccaaat ccggcacggc acgctgcaaa tccaaaccct gcaacacatt
      541 caacacaaaa ccgtagatca aatcaaaaaa caccacgcct atcggcaaag cactcaaaac
      601 ccgccacatc ttcctgtccg accaaccgtt caaaaccttc attttacccg accacgcaag
      661 ccgccgaaca aaaaata
//
LOCUS       DAWKOX010000274          651 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.274, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000274 DAWKOX010000000
VERSION     DAWKOX010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.274"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(51..536)
                     /gene="fxsA"
                     /locus_tag="WJK78_002013"
     CDS             complement(51..536)
                     /gene="fxsA"
                     /locus_tag="WJK78_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ7598881.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAAGFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          194 a          212 c          116 g          129 t
ORIGIN      
        1 tcaaaccgga aaaatgccgt ctgaatcttc agacggcatt ccattcatat ttattcgtct
       61 tttttgtgtt cgatggcgtt tcgggaacga ttgccgccgt aaggctcttc aaccgtatat
      121 tccccctcga taatatcgtc atcgcgggaa aagccctctt ttctgcccga ttggttcatg
      181 ttgaaaaaat tttccgcacc tcctgcctgc aacactgcac ctcccttaaa cggcagcagc
      241 agcaacaccg ccaacaccga ggatacgaat cccggactca tcagacacac cgccgccacc
      301 gtataacgga taggccacaa catctgataa acggataccc tcccgccgct tctcattgcc
      361 gcgcccgcca ataaaagacc ggacagcccc gtatgcctga gcatcagcac accggcggca
      421 aaacctgccg ccatcaaaaa caacgtccag ccgccgccca accaatcggc aacccacaca
      481 atcgacataa tctccaaaaa cagcagcacc aaaaaaccga taccgaaaaa tctcattgac
      541 cgtcatcctt atatttaagt aaacagcaaa ccgcccgaac aggactccaa gcgacctgcc
      601 tgtaaatgat tacaaaacca tgtgcttcaa gccgaaacaa tgtgaaatca c
//
LOCUS       DAWKOX010000275          650 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.275, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000275 DAWKOX010000000
VERSION     DAWKOX010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.275"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            121..>650
                     /locus_tag="WJK78_002014"
     CDS             121..>650
                     /locus_tag="WJK78_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Opacity protein opA54"
                     /protein_id="HEZ7598882.1"
                     /translation="MQPPKNLLFSSLLFSSLLFSSAAQAASEDSSRSPYYVQADLAYA
                     AERITHDYPKATGANNTSTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYASYRKWN
                     NNKYSVNTKEVLRNNNGNRKELKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFKPY
                     IGARVAYGHVKHQVHSV"
BASE COUNT          196 a          172 c          125 g          157 t
ORIGIN      
        1 ttgttcatcc gctatattgt gttgaaacat cgccacaaac ctgatatagt ccgctcctgc
       61 aacatcattg aaaatctttc ttttttaatc agttaaaacc gaatacggag ccgaaaatga
      121 atccagcccc caaaaaacct tctcttctct tctcttctct tctcttctct tctcttctct
      181 tccgcagcgc aggcggcaag tgaagacagc agccgcagcc cgtattatgt acaggcggat
      241 ttagcttatg ccgccgaacg cattacccac gattatccga aagcaaccgg tgcaaacaac
      301 acaagcacag taagcgatta tttcagaaac atccgtgcgc attccatcca cccccgggtg
      361 tcggtcggct atgatttcgg cggctggagg atagcggcag attatgccag ttacagaaaa
      421 tggaacaaca ataaatattc cgtcaacaca aaagaggtgc taagaaacaa taatggcaac
      481 aggaaagaac tgaagacgga aaatcaggaa aacggtacat tccacgcagt ctcatcgctc
      541 ggcttatccg ccatttacga tttcaaactc aacgataaat tcgataaatt caaaccctat
      601 atcggtgcgc gcgtcgccta cggacacgtt aaacatcagg ttcattcagt
//
LOCUS       DAWKOX010000276          604 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.276, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000276 DAWKOX010000000
VERSION     DAWKOX010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.276"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            32..394
                     /locus_tag="WJK78_002015"
     CDS             32..394
                     /locus_tag="WJK78_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEZ7598883.1"
                     /translation="MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQESEQDRRERLLSLTEKGKAHAAPLTE
                     SAQEFSDKETFAKFPKIP"
     gene            425..>604
                     /locus_tag="WJK78_002016"
     CDS             425..>604
                     /locus_tag="WJK78_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ7598884.1"
                     /translation="MSTFFRQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPAYPLLSM"
BASE COUNT          177 a          176 c          132 g          119 t
ORIGIN      
        1 cgcacaaatt tagtcaatat caagaccaat tatgaaccaa ctcgaccaac ttggcacccg
       61 tatcaacctg atttgcaatg tcttcgacaa atggatcggg cagcaggatc tgaattacaa
      121 cctctttgcc gtactttata ccctggcaac cgaaggcagc cgcacgcaaa agcatatcgg
      181 cgaaaagtgg agcctgccca aacagaccgt ttcaggcgta tgcaaaaccc ttgccggaca
      241 agggttgatt gaatggcagg aaagcgaaca ggaccggcgc gaacggttgc tgtcgctgac
      301 cgaaaaaggc aaagcccatg ccgcaccttt aacagaaagc gcgcaggaat tcagcgacaa
      361 agagaccttt gcaaaattcc ccaaaatccc ctaaattccc accaagacat ttaggggatt
      421 ttccatgagc accttcttcc ggcaaaccgc ccaagccatg attgccaaac acatcaaccg
      481 cttcccgcta ttgaagttgg accaggtgat tgattggcag ccgatcgaac agtatctgaa
      541 tcgtcaaaga acccgttacc ttagagacca ccgcggccgt cccgcctatc ccctgctgtc
      601 catg
//
LOCUS       DAWKOX010000277          604 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.277, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000277 DAWKOX010000000
VERSION     DAWKOX010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..604
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.277"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            18..>604
                     /locus_tag="WJK78_002017"
     CDS             18..>604
                     /locus_tag="WJK78_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ7598885.1"
                     /translation="MQADLAYAAERITHNYPEPTGANKDKISTVSDYFRNIRAHSIHP
                     RVSVGYDFGGWRIAADYASYRKWNNNKYSVNTKKVQENQGTRKDLKTENQENGSFHAA
                     SSLGLSAIYDFKLNDKFKPYIGARVAYGHVRYSIDSTKKTTDVVTVATNTPDGAPTIY
                     NEPKTQNAYHESHSIRRLGLGVVAGVGFDITPKLT"
BASE COUNT          184 a          170 c          131 g          119 t
ORIGIN      
        1 ggcgcggccc gtattatgtg caggcggatt tagcctacgc cgccgaacgc attacccaca
       61 attatccgga accaaccggt gcaaacaaag acaaaataag cacagtaagc gattatttca
      121 gaaacatccg tgcgcattcc atccaccctc gtgtgtcggt cggctacgac ttcggcggct
      181 ggagaatagc ggcagattat gccagttaca gaaaatggaa caacaataaa tattccgtca
      241 acacaaaaaa ggtgcaagaa aaccaaggca ccagaaaaga cctgaagacg gaaaatcagg
      301 aaaacggcag cttccacgcc gcttcttctc tcggcttatc cgccatttac gatttcaaac
      361 tcaacgataa attcaaaccc tatatcggtg cgcgcgtcgc ctacggacac gtcagataca
      421 gcatcgattc gaccaaaaaa acaacagatg ttgttaccgt cgccaccaat actcctgacg
      481 gagcacctac gatttataat gagccaaaga cgcaaaacgc ctatcacgaa agccacagca
      541 tccgccgctt gggtcttggt gtcgtcgccg gtgtcggttt cgacatcacg cccaagctga
      601 cttt
//
LOCUS       DAWKOX010000278          598 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.278, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000278 DAWKOX010000000
VERSION     DAWKOX010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.278"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..150
                     /locus_tag="WJK78_002018"
     CDS             <1..150
                     /locus_tag="WJK78_002018"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598886.1"
                     /translation="SIRQGKPEEEFSRKMAGCLTDLENCLEKYLEQFGPVSESIEACT
                     VKLQE"
     gene            172..465
                     /locus_tag="WJK78_002019"
     CDS             172..465
                     /locus_tag="WJK78_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598887.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPDRPDCFDMKAVWQMFNRIPR"
BASE COUNT          159 a          151 c          158 g          130 t
ORIGIN      
        1 tccattcggc agggaaagcc tgaagaagaa ttttcccgca agatggccgg ctgcctaacc
       61 gacttggaaa actgtttgga aaaatacctc gaacagttcg ggccggtatc ggaaagtatc
      121 gaagcctgta ccgtcaaact gcaggagtaa ccgtcgttct tcaacaggct gatgaaaacc
      181 aacgacaagc tcaataggca gattgacgtg ttgcagaaac agtcggcagc catccacaac
      241 gaagcctata tcgaaatgaa cacgctgctt taccgccacc gcgaagtggt ttccgtccac
      301 aaccgcaagg cggattatgc ggaaaagggc aaagagcgga ttgcgctgtt cccgcgcggc
      361 ttgaacggca tcaccaagct gcctgccgcc gtcctgttgc ccgatcgtcc cgattgtttt
      421 gatatgaagg cagtttggca aatgtttaat agaataccga ggtaggcgta tcggctgccg
      481 gataaaaatg ccgtctgaaa cggaagcgtt cagacggcat tgttgcagtg gaacaaatca
      541 aaatgcaccc cgtcattcct gtctgtacgg tgatagcggc agtgttttcc tgcttcgt
//
LOCUS       DAWKOX010000279          587 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.279, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000279 DAWKOX010000000
VERSION     DAWKOX010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.279"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>587
                     /locus_tag="WJK78_002020"
     CDS             <1..>587
                     /locus_tag="WJK78_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ7598888.1"
                     /translation="IDIKSGGSIDAYATAFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSQKRRRFLGISYSKAHDTTTQVMKTALPSRVVAESANLQSGWDTKLQGTQFETTLGG
                     ATIRAGVGEQARADAKIILEGIKTTIHNETVSSSKSALWQKQAGRGSNIETLQLPSFT
                     GPVAPVLSAPGGYIVDIPKGNLKTQIETLTKQPEYA"
BASE COUNT          180 a          179 c          137 g           91 t
ORIGIN      
        1 atcgacatca aatctggtgg cagcatcgac gcctacgcca ccgcattcga tgcccccaaa
       61 ggcagcatta acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac
      121 tacgacaaac tagacagcca aaaaaggcgc agatttctcg gcatcagcta cagcaaagca
      181 cacgacacca ccacccaagt catgaaaacc gcgctgccct caagggtagt tgcagaatca
      241 gccaacctcc aatcgggctg ggataccaaa ctgcaaggca cacagtttga aaccacactg
      301 ggtggcgcaa ccatacgcgc aggcgtaggt gagcaggcac gggcagatgc caagattatc
      361 ctcgaaggca tcaaaaccac gatccacaac gaaaccgtga gcagcagcaa atctgctcta
      421 tggcaaaaac aggcaggacg gggcagtaac atcgaaacct tgcaattgcc gagtttcacc
      481 ggtcccgttg cgcccgtact gtccgcaccc ggcggttaca ttgtcgatat tcccaaaggc
      541 aatctgaaaa cccaaatcga aaccctcacc aagcagcccg agtatgc
//
LOCUS       DAWKOX010000280          536 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.280, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000280 DAWKOX010000000
VERSION     DAWKOX010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.280"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            <1..>536
                     /locus_tag="WJK78_002021"
     CDS             <1..>536
                     /locus_tag="WJK78_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ7598889.1"
                     /translation="LSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDD
                     TLSELLELINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQAIEVDEEGQINGQTTP
                     SKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGLPKGT
                     TVYADKGYDSAENRQHLK"
BASE COUNT          166 a          156 c          118 g           96 t
ORIGIN      
        1 ctctccgatc ccgaactcga acacagcctc attacccgca tcgacttcaa cctgttttgc
       61 cgtttcgacg aactgagcat ccctgattac agcaccttat gccgctaccg caactggctg
      121 gcgcaagacg acaccctgtc cgaactgttg gaactgatta accgccaact gaccgaaaaa
      181 ggcttaaaag tagagaaagc atccgcagcc gtcgttgatg ccaccattat tcagaccgcc
      241 ggcagcaaac agcgtcaggc catagaagtc gatgaagaag gacaaatcaa cggtcaaacc
      301 acaccgagta aggacaaaga tgcccgttgg ataaagaaaa acggcctcta caaactcggt
      361 tacaaacaac atacccgtac cgatgcggaa ggctatatcg agaaactgca catcaccccc
      421 gccaatgccc atgagtgcaa acacctgtcg cctttgctgg aaggattgcc caaaggtacg
      481 accgtctatg ctgataaagg ctatgacagt gcggaaaacc ggcaacatct gaaaga
//
LOCUS       DAWKOX010000281          535 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.281, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000281 DAWKOX010000000
VERSION     DAWKOX010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..535
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.281"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
BASE COUNT          220 a           47 c           93 g          175 t
ORIGIN      
        1 tgatttttgt taatccacta tacgtcctag attcccactt tcgtgggaat gacgggatgt
       61 gggtttttgt gcggatttga accggtaagg gtggtgtggg attggtggtt tgcttaggat
      121 cttttggatt gtagtttgta tatacattta cttgttgata aaagataaaa taaaattaga
      181 aactaaaagt gagaaaaaat taataataat agggatgtat aaatgtaaag gctccgtttc
      241 atagctaagg ttatctgaat atatggaaaa aaagtaaaag tccataaaac taaaatatat
      301 agataatgct aatgataata gaattatcac tttcctagag taaggataat atttttttat
      361 cgtaaaaaaa tataaaatag gataaataat tgccatatag atagattttg taacaaaatt
      421 aaaaataaat aataaaaata atgtaataaa gtatattttt tggctatgaa ataaaattgt
      481 acataattga acgagcagat caaaaaatga actacatata acaataaata ataac
//
LOCUS       DAWKOX010000282          522 bp    DNA     linear   BCT 20-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M22839_Neisseria
            meningitidis SAMN10275913-rid8981313.denovo.282, whole genome
            shotgun sequence.
ACCESSION   DAWKOX010000282 DAWKOX010000000
VERSION     DAWKOX010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN10275913
            Sequence Read Archive: SRR8200315
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-FEB-2020) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 02-FEB-2020
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000676305.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000676305.1
            Genome Coverage       :: 129x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/21/2022 17:42:47
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,023
            CDSs (total)                      :: 1,972
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 51
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 70
            CDSs (without protein)            :: 70
            Pseudo Genes (ambiguous residues) :: 0 of 70
            Pseudo Genes (frameshifted)       :: 38 of 70
            Pseudo Genes (incomplete)         :: 33 of 70
            Pseudo Genes (internal stop)      :: 7 of 70
            Pseudo Genes (multiple problems)  :: 8 of 70
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN10275913-rid8981313.denovo.282"
                     /isolate="M22839_Neisseria meningitidis"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /collection_date="2006"
                     /collected_by="Centers for Disease Control and Prevention"
     gene            complement(<1..305)
                     /locus_tag="WJK78_002022"
     CDS             complement(<1..305)
                     /locus_tag="WJK78_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ7598890.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLA"
     gene            complement(289..>522)
                     /locus_tag="WJK78_002023"
     CDS             complement(289..>522)
                     /locus_tag="WJK78_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ7598891.1"
                     /translation="VIAQSEFVEFAKINKSENVIDCFSFFWNRRIKHDIWLISFSDNS
                     EKVIKESLKDGHKIYKFEFCEIVDNCNFDDVFV"
BASE COUNT          153 a          104 c           93 g          172 t
ORIGIN      
        1 tgggctaaaa gggctgttcc gacataggga accgcccttg tgctgaattt cgcgcctaag
       61 cgggcaagtt tgccgccccc cgccaatacg ccggcgcggg aaatgctggc ggttattttg
      121 gcgttgattc gggcttttgc gcccgtaggg atgtgtgtta aatctaccgt ttttattaaa
      181 tcagatgaat aagttttact atttttaggt acaaacttat gaattttcgc accttgtccg
      241 gtatcaactg aaacagtttc agatattttt actgcatttg cattcgcttc aaacgaatac
      301 atcatcaaaa ttgcaattat cgacaatttc gcaaaattca aatttgtata ttttatgacc
      361 atctttcagg gattctttaa ttaccttttc tgaattatca gaaaatgaga ttagccaaat
      421 atcatgttta attcttctat tccagaaaaa agagaaacaa tcaataacat tttcagactt
      481 attaatcttc gcaaattcaa caaattcaga ttgcgctata ac
//
